H2CO和NO2反应机理的密度泛函理论计算研究

用密度泛函理论方法在UB3LYP/ 6-311++G(d,p)并包含零点能水平上计算得到了H2CO和NO2反应的势能面.在势能面上找到了由H2CO和NO2反应生成HCO和trans-HONO的两条反应通道.直接H迁移反应通道的势垒只有90.54 kJ*mol-1,是主要的反应通道,其TST速率是7.9 cm3*mol-1*s-1,与文献值相符;另一条通道是H2CO异构化为trans-HCOH,然后C位H迁移,最后生成的HOC分子异构化为HCO,这条通道反应势垒高达348.03 kJ*mol-1,是一条次要反应通道.     

Ir-in-CeO_2催化剂上CO氧化过程中表面碳酸盐的量热研究

应用Tian-Calvet热流量热仪与脉冲微反系统相结合的脉冲量热装置研究了Ir-in-CeO2(Ir主要包裹在CeO2里)催化剂上CO氧化过程表面碳酸盐的形成及其转化.结果表明,碳酸盐的吸附强度与CeO2表面价态直接相关.在反应中首先形成约0.07个单层覆盖度的不可逆吸附碳酸盐,随后形成约0.02个单层覆盖度的可逆吸附碳酸盐并随着Ce3+转变为Ce4+而分解.     

A DFT study on the insertion of CO2 into styrene oxide catalyzed by 1‐butyl‐3‐methyl‐Imidazolium bromide ionic liquid

Green systems able to capture or fix CO₂ are becoming more important specially to reduce environmental impacts. In this work, the mechanism of insertion of CO₂ into styrene oxide (STYO) both in the absence and presence of the catalyst 1‐butyl‐3‐methyl‐imidazolium bromide (BMIm Br) was investigated through calculations based on density functional theory in the ωB97X‐D level. Two different routes were considered and it was shown they are energetically available and compete against each other. For both routes, the rate‐determinant step is the ring opening of STYO resulting from the nucleophilic attack of the Br^? on the C atom from STYO and is associated mainly to the participation of the cation and the anion from the catalyst in the reaction. Reactive indices and noncovalent interaction analysis were used as a tool to investigate this reason. This work allowed a better comprehension of the underlying mechanism and the supplied data provide valuable support for the design of new more efficient ionic liquid catalyst. © 2015 Wiley Periodicals, Inc.     

杂环反铂(Ⅱ)抗癌药物水解反应机理的DFT研究

用DFT-B3LYP方法和IEF-PCM溶剂化模型研究了反铂抗癌药物trans-[PtCl2(piperidine)(Am)](Am=2-picoline(1),3-picoline(2),4-picoline(3)),trans-[PtCl2(piperidine)(piperazine)](4),trans-[PtCl2(pipera-zine)2](5)and trans-[PtCl2(iminoether)2](6)的水解过程.水解反应是药物与DNA靶分子作用的关键活化步骤.全优化和表征了一水解和二水解反应经由一般的SN2路径过程所有物种的势能面稳定点.结果发现反应过程遵循已经建立的平面正方形配合物的配体取代反应理论,即取代反应通常通过一个三角双锥过渡态结构的铂配体交换反应发生.得到的过渡态结构与以前的相关工作一致,所有反应都是吸热反应;所有体系的二水解能垒都高于一水解.与顺铂相比,这些配合物都有更快的水解反应速率;并与以前类似的反铂配合物的研究做了比较.研究结果提供了这些配合物水解反应过程的详细能量变化,对理解药物与DNA靶分子的作用机理和新型反铂抗癌药物的设计有帮助.     

Ligand-assisted Hydride Transfer: A Pivotal Step for CO2 Hydroboration Catalyzed by a Mononuclear Mn(I) PNP Complex

A mononuclear Mn(I) pincer complex [Mn(Ph₂PCH₂SiMe₂)₂NH(CO)₂Br] was disclosed to catalyze the pinacolborane (HBpin)-based CO₂ hydroboration reaction. Density functional calculations were conducted to reveal the reaction mechanism. The calculations showed that the reaction mechanism could be divided into four stages: (1) the addition of HBpin to the unsaturated catalyst C1 ; (2) the reduction of CO₂ to HCOOBpin; (3) the reduction of HCOOBpin to HCHO; (4) the reduction of HCHO to CH₃OBpin. The activation of HBpin is the ligand-assisted addition of HBpin to the unsaturated Mn(I)-N complex C1 generated by the elimination of HBr from the Mn(I) pincer catalyst. The sequential substrate reductions share a common mechanism, and every hydroboration commences with the nucleophilic attack of the Mn(I)-H to the electron-deficient carbon centers. The hydride transfer from Mn(I) to HCOOBpin was found to be the rate-limiting step for the whole catalytic reaction, with a total barrier of 27.0 kcal/mol, which fits well with the experimental observations at 90 °C. The reactivity trend of CO₂, HCOOBpin, HCHO, and CH₃OBpin was analyzed through both thermodynamic and kinetic analysis, in the following order, namely HCHO>CO₂>HCOOBpin≫CH₃OBpin. Importantly, the very high barrier for the reduction of CH₃OBpin to form CH₄ reconciles with the fact that methane was not observed in this catalytic reaction.     

功能离子液体[NH2p-bim]BF4吸收CO2的密度泛函研究

用密度泛函理论对功能化离子液体[NH2p-bim]BF4吸收CO2的作用机制进行了理论研究。在RB3LYP/6-311 G**的计算水平对离子液体[NH2p-bim]BF4的结构以及CO2与该离子液体反应可能生成的产物进行了全优化,获得了优化结构的振动频率和热力学数据。计算结果表明,离子液体[NH2p-bim]BF4吸收CO2主要是通过离子液体的阳离子[NH2p-bim] 自偶解离的[NHp-bim]与CO2分子结合生成[O2C-NHp-bim],其结合能为238-260 kJ/mol。     

金镍六原子团簇吸附CO的密度泛函研究

在UBP86/LAN2DZ水平上计算了金镍二元团簇(AunNi6-n,n=0～6)吸附CO的稳定构型和相关性质.计算结果表明,AunNi6-nCO团簇的最低能量结构是在AunNi6-n团簇最低能量结构或亚稳态结构基础上吸附CO分子而形成.优化结构中C-O键长表明,吸附后的CO没有解离,即CO分子在AunNi6-n团簇表...     

气相中2Sr+和2Ba+催化N2O与CO还原反应的理论研究

用密度泛函理论DFT-UB3LYP方法,对2Sr+,2Ba+采用相对论校正赝势基组SDD,对C,N,O采用6-311+G(2d)基组,计算研究了气相中碱土金属离子2Sr+,2Ba+催化N2O(X1∑+)+CI(X1∑+)→N2(X1∑+g)+CO2(X1∑+g)反应的微观机理.优化了二重态势能面上各反应物、中间体和过渡...     

Mechanistic study on gold(I)‐catalyzed crosscoupling of diazo compounds: A DFT study

The reaction mechanisms of the gold(I)‐catalyzed cross‐coupling reaction of aryldiazoacetate R1 with vinyldiazoacetate R2 leading to N‐substituted pyrazoles have been theoretically investigated using density functional theory calculations. Two possible reaction mechanisms were examined and discussed. The preferred reaction mechanism (mechanism A) can be characterized by five steps: the formation of the gold carbenoid A2 via the attack of catalyst to R1 (step I), nucleophilic addition of another reactant R2 to generate intermediate A3 (step II), intramolecular cyclization of A3 to form intermediate A4 (step III), hydrogen migration to give intermediate A5 (step IV), and catalyst elimination affording the final product P1 (step V). Step IV is found to be the rate‐determining step with an overall free energy barrier of 28.3 kcal/mol. Our calculated results are in good agreement with the experimental observations. The present study may provide a useful guide for understanding these kinds of gold(I)‐catalyzed cross‐coupling reactions of diazo compounds.     

Phosphorene Supported Single-Atom Catalysts for CO Oxidation: A Computational Study

Single-atom catalysts (SACs) have attracted extensive attention owing to their high catalytic activity. The development of efficient SACs is crucial for applications in heterogeneous catalysis. In this article, the geometric configuration, electronic structure, stabilitiy and catalytic performance of phosphorene (Pn) supported single metal atoms (M=Ru, Rh, Pd, Ir, Pt, and Au) have been systematically investigated using density functional theory calculations and ab initio molecular dynamics simulations. The single atoms are found to occupy the hollow site of phosphorene. Among the catalysts studied, Ru-decorated phosphorene is determined to be a potential catalyst by evaluating adsorption energies of gaseous molecules. Various mechanisms including the Eley-Rideal (ER), Langmuir-Hinshelwood (LH) and trimolecular Eley-Rideal (TER) mechanisms are considered to validate the most favourable reaction pathway. Our results reveal that Ru−Pn exhibits outstanding catalytic activity toward CO oxidation reaction via TER mechanism with the corresponding rate-determining energy barrier of 0.44 eV, making it a very promising SAC for CO oxidation under mild conditions. Overall, this work may provide a new avenue for the design and fabrication of two-dimensional materials supported SACs for low-temperature CO oxidation.     

Theoretical study on the reactions of Nb and Nb+ with CO2 in gas phase

Density functional theory calculations have been performed to explore the potential energy surfaces of C? O bond activation in CO₂ molecule by gas‐phase Nb atom and Nb⁺ cation for better understanding the reaction mechanism of second‐row metal with CO₂. The minimum‐energy reaction path is found to involve the spin inversion in the different reaction steps. This potential energy curve‐crossing dramatically affects the reaction energetic. The present results show that the mechanism is insertion‐elimination mechanism along the C? O bond activation reaction. All theoretical results not only support the existing conclusions inferred from early experiment but also complement the pathway and mechanism for this reaction. © 2010 Wiley Periodicals, Inc. Int J Quantum Chem, 2011     

Density functional theory study of CO catalytic oxidation on Co_2B_2/TiO_2（110） surface

Titanium dioxide with CoB amorphous alloys nanoparticles deposited on the surface is known to exhibit higher catalytic activity than the CoB amorphous. A study of the structure of such system is necessary to understand this effect. A quantum chemical study of Co2B2 on the TiO2 (110) surface was studied using periodic slab model within the framework of density functional theory (DFT). The results of geometry optimization indicated that the most stable model of adsorption was Co2B2 cluster adsorbed on the hollow site of TiO2.The adsorption energy calculated for Co2B2 on the hollow site was 439.3 kJ/mol.The adsorption of CO and O2 was further studied and the results indicated that CO and O2 are preferred to adsorb on the Co2 site. Co-adsorption of CO and O2 shows that Co2B2/TiO2 is a good catalyst for the oxidation of CO to carbon dioxide in the presence of oxygen.     

Insight into the reaction mechanism of CH2SH with HO2: A density functional theory study

Density functional theory was adopted in this work to reveal the reaction mechanism of CH₂SH with HO₂. Reaction rate constants were computed from 200 to 2000 K using the transition state theory combined with Wigner and Eckart tunneling correction. Moreover, localized orbital locator, atoms in molecules and Mayer bond order analyses were used to study the essence of chemical bonding evolution. Eleven singlet paths and three triplet ones are located on the potential surface (PES). The results show that the main products on the singlet PES are ¹CH₂S and H₂O₂, whereas on the triplet PES they are CH₃SH + ³O₂, which are coincident with the similar reaction of CH₃S and HO₂. This conclusion is also supported by rate constant calculation results. Interestingly, all the possible paths are involved in the hydrogen transfer. The results have provided underlying insights to the analogous reactions and further experimental studies.     

DFT study of the cryptand and benzocryptand and their complexes with alkali metal cations: Li+, Na+, K+

In the present work, a theoretical study of the cryptand 4, 7, 13, 16, 21, 24-hexaoxa-1, 10- diazabicyclo [8,8,8] hexacosan (the named [222]) and the cryptand 5, 6-benzo-4, 7, 13, 16, 21, 24-hexaoxa-1, 10-diazabicyclo [8, 8, 8] hexacosan (the nemed [222B]) had been done using density functional theory (DFT) with B3LYP/6-31G* method in order to obtain the electronic and geometrical structure of the cryptands and their complexes with alkali metal ions: Li(+), Na(+), and K(+). The nucleophilicity of cryptands had been investigated by the Fukui function. For complexes, the match between cation and cavity size, the status of interaction between alkali metal ions and donor atoms in the cryptands and the rigidity of the cryptands had been analyzed through the other calculated parameters. In addition, the enthalpies of complexation reaction and cation exchange reaction had been studied by the calculated thermodynamic data. The calculated results are in a good agreement with the experimental data for the complexes.     

基于密度泛函理论计算的CO2在SrTiO3(100)表面的吸附

通过密度泛函理论的第一性原理,模拟了CO2分子在SrTiO3(100)表面TiO2-和SrO-位点上的吸附行为,获得了CO2在几种不同吸附模型下的结构参数及表面吸附能,进而研究了吸附机理和结构稳定性.计算结果表明,当CO2的C原子吸附在SrTiO3(100)表面SrO-及TiO2-位点的氧原子上时,吸附结构较稳定,尤其是C、O原子共吸附在TiO2-位点时最稳定,而其余吸附模型则不稳定.对吸附稳定模型的Mulliken布局数及态密度分析显示:CO2分子在SrTiO3(100)表面吸附主要是由于SrTiO3(100)面的电子跃迁至CO2分子,CO2分子得到电子形成弯曲的CO2-阴离子结构,并伴随着C-O键的伸长,从而达到吸附活化CO2的目的.     

Identifying the O2 diffusion and reduction mechanisms on CeO2 electrolyte in solid oxide fuel cells: A DFT + U study

The interactions and reduction mechanisms of O₂ molecule on the fully oxidized and reduced CeO₂ surface were studied using periodic density functional theory calculations implementing on‐site Coulomb interactions (DFT + U) consideration. The adsorbed O₂ species on the oxidized CeO₂ surface were characterized by physisorption. Their adsorption energies and vibrational frequencies are within ?0.05 to 0.02 eV and 1530–1552 cm^?1, respectively. For the reduced CeO₂ surface, the adsorption of O₂ on Ce⁴⁺, one‐electron defects (Ce³⁺ on the CeO₂ surface) and two‐electron defects (neutral oxygen vacancy) can alter geometrical parameters and results in the formation of surface physisorbed O₂, O₂^a? (0 < a < 1), superoxide (O₂^?), and peroxide (O₂^2?) species. Their corresponding adsorption energies are ?0.01 to ?0.09, ?0.20 to ?0.37, ?1.34 and ?1.86 eV, respectively. The predicted vibrational frequencies of the peroxide, superoxide, O₂^a? (0 < a < 1) and physisorbed species are 897, 1234, 1323–1389, and 1462–1545 cm^?1, respectively, which are in good agreement with experimental data. Potential energy profiles for the O₂ reduction on the oxidized and reduced CeO₂ (111) surface were constructed using the nudged elastic band method. Our calculations show that the reduced surface is energetically more favorable than the unreduced surface for oxygen reduction. In addition, we have studied the oxygen ion diffusion process on the surface and in bulk ceria. The small barrier for the oxygen ion diffusion through the subsurface and bulk implies that ceria‐based oxides are high ionic conductivity at relatively low temperatures which can be suitable for IT‐SOFC electrolyte materials. © 2009 Wiley Periodicals, Inc. J Comput Chem, 2009     

CeO2(110)表面上CO氧化反应的密度泛函理论研究

利用密度泛函理论系统研究了O2与CO在CeO2(110)表面的吸附反应行为. 研究表明, O2在洁净的CeO2(110)表面吸附热力学不利, 而在氧空位表面为强化学吸附, O2分子被活化, 可能是重要的氧化反应物种. CO在洁净的CeO2(110)表面有化学吸附与物理吸附两种构型, 前者形成二齿碳酸盐物种, 后者与表面仅存在弱的相互作用. 在氧空位表面, CO可分子吸附或形成碳酸盐物种, 相应吸附能均较低. 当表面氧空位吸附O2后(O2/Ov), CO可吸附生成碳酸盐或直接生成CO2, 与原位红外光谱结果相一致. 过渡态计算发现,O2/Ov/CeO2(110)表面的三齿碳酸盐物种经两齿、单齿过渡态脱附生成CO2. 利用扩展休克尔分子轨道理论分析了典型吸附构型的电子结构, 说明表面碳酸盐物种三个氧原子电子存在离域作用, 物理吸附的CO及生成的CO2电子结构与相应自由分子相似.     

Ag_2~-催化CO氧化反应机理的理论研究

用密度泛函理论B3LYP方法详细研究了Ag_2~-催化CO氧化反应的机理.计算结果表明,O2分子在Ag_2~-和Au_2~-上吸附能相差不大,而CO分子在Ag_2~-上吸附要比在Ag_2~-上弱得多.Ag_2~-催化CO氧化反应共有四条反应途径.最可能反应通道为CO插入Ag2O_2~-中的Ag—O键形成中间体[Ag—AgC(O—O)O]-,然后直接分解形成产物CO2和Ag2O-,或另一分子CO进攻中间体[Ag—AgC(O—O)O]-形成两分子产物CO2和Ag_2~-.在动力学上最难进行的反应通道为经历碳酸根双银中间体,需要克服约0.24eV的能垒.Ag_2~-催化CO氧化反应活性要高于Au_2~-.