Molecular and electronic structure of chromium(V) nitrido complexes with azide and isothiocyanate ligands

The first use of [Cr(N)Cl4]2- as a starting material in chromium(v) nitrido chemistry is demonstrated in simple, high yield, metathesis reactions with the pseudohalogens SCN- and N3- yielding five-coordinate, labile complexes: [Cr(N)(NCS)4]2- and [Cr(N)(N3)4]2-, which have been crystallized and characterized by single-crystal X-ray diffraction. Reaction of [Cr(N)(NCS)4]2- with 1,10-phenanthroline furnishes six-coordinate [Cr(N)(NCS)3(phen)]- wherein phenanthroline coordinates to the position trans to the nitrido ligand. The trans influence of the nitrido ligand leads to a bond length difference of 0.223 A between the axial and equatorial ligators from the phenanthroline ligand. The absorption band with lowest energy in these pseudo-linear complexes is assigned as the electric dipole forbidden transition d(xy) --> d(x-y) based on intensities and its variation with the nature of the equatorial ligators. This absorption provides the spectrochemical series for the equatorial ligands, which is found to be numerically almost identical to that determined for chromium(III). DFT calculations reproduce the observed structures and corroborate the ligand field picture of the electronic structure of these complexes.     

(Alpha-diimine)chromium complexes: molecular and electronic structures; a combined experimental and density functional theoretical study

Dark brown crystals of [Cr( (1)L) 2] ( 1) were obtained from the reaction of [Cr (III)(acac) 3] (acac (-) = 2,4-pentanedionate) with 2 equiv of 2-methyl-1,4-bis(2,6-dimethylphenyl)-1,4-diaza-1,3-butadiene ( (1)L) and 3 equiv of sodium in tetrahydrofuran (thf) under an Ar atmosphere. Complex 1 possesses an S = 1 ground state, which is attained via intramolecular antiferromagnetic coupling between a high-spin Cr (II) ion ( S Cr = 2) and two anionic alpha-diiminato(1-) ligand pi radicals ( (1)L (*)) (1-). The molecular structure of 1 exhibits a distorted tetrahedral, nearly square-planar geometry. The average C-N imine bond length at 1.346 A is characteristic for the pi radical anion ( (1)L (*)) (1-), and therefore, the electronic structure of 1 is best described as [Cr (II)( (1)L (*)) 2]. This has been confirmed by broken symmetry density functional theoretical calculations BS(4,2) (DFT) at the B3LYP level. The reaction of [Cr (III)(acac) 3] with 1 equiv of 2,3-dimethyl-1,4-bis(2,6-diisopropylphenyl)-1,4-diaza-1,3-butadiene ( (2)L) and 1 equiv of Na in thf under Ar yields red-brown crystals of [Cr (III)( (2)L (*))(acac) 2] ( 2) ( S = 1). The oxidation of 2 with 1 equiv of Fc(PF 6) (Fc (+) = ferrocenium) in CH 2Cl 2 affords crystals of [Cr (III)( (2)L (ox))(acac) 2](PF 6) ( 3) ( S = (3)/ 2). The crystal structure determinations of 2 and 3 revealed that 2 contains a neutral, octahedral Cr (III) species [Cr (III)( (2)L (*))(acac) 2], whereas in 3 the ligand is oxidized, yielding an octahedral monocation [Cr (III)( (2)L (ox))(acac) 2] (+). These electronic structures have been confirmed by DFT calculations.     

Molecular and electronic structures of oxo-bis(benzene-1,2-dithiolato)chromate(V) monoanions. A combined experimental and density functional study

Two oxo-bis(benzene-1,2-dithiolato)chromate(V) complexes, namely, [CrO(L(Bu))2]1- and [CrO(L(Me))2]1-, have been synthesized and studied by UV-vis, EPR, magnetic circular dichroism (MCD), and X-ray absorption spectroscopy and by X-ray crystallography; their electro- and magnetochemistries are reported. H2L(Bu) represents the pro-ligand 3,5-di-tert-butylbenzene-1,2-dithiol, and H2L(Me) is the corresponding 4-methyl-benzene-1,2-dithiol. A structural feature of interest for both the complexes is the folding of the dithiolate ligands about the S-S vector providing Cs symmetry to the complexes. Geometry optimizations using all-electron density functional theory with scalar relativistic corrections at the second-order Douglas-Kroll-Hess (DKH2) and zeroth-order regular approximation (ZORA) levels result in excellent agreement with the experimentally determined structures and electronic and S K-edge X-ray absorption spectra. From DFT calculations, the Cs instead of C2v symmetry for the complexes is attributed to the strong S(3p) --> Cr(3d(x2-y2)) pi-donation in Cs geometry providing additional stability to the complexes.     

Magnetic properties and electronic structure of manganese(III) porphyrins

The average magnetic susceptibility (1.2-100 K) and magnetisation (100–15000 Oe at 4.2 K) of two perchlorato manganese(III) porphyrins establish them to be high-spin, in contrast to the “anomalous” behaviour of analogous iron(III) porphyrins. An explanation of the origin of the zero-field splitting in high-spin manganese(III) porphyrins is presented.     

Spin density distribution in mononuclear Rh(0) complexes: A combined experimental and DFT study

The paramagnetic complex [Rh(trop₂dach)]2 was obtained by reduction of the almost planar 16-electron cationic precursor complex, [Rh(trop₂dach)]⁺1 and characterized by EPR spectroscopy [g₁₁ = 2.069, g₂₂ = 2.014, g₃₃ = 1.964, g_iso = 2.016; A(Rh) = (<40, 29, 30)]. The unobservable small nitrogen hyperfine coupling and DFT calculations show that most of the spin density is localized on the hydrocarbon ligand framework and only about 35% on the metal center. DFT calculations on various 17 electron rhodium complexes with carbonyl, olefine, or phosphane ligands like [Rh(CO)₄], [Rh(cod)₂], and [Rh(dppe)₂] reveal that in none of these the spin density at the metal center exceeds 45%. That is all formally Rh(0) complexes reported to date are better described as highly delocalized radicals and an assignment of the formal metal oxidation state is not meaningful.     

Hybrid DFT study of electronic structure on quasi-one-dimensional halogen-bridged binuclear metal complexes (MMX)

The electronic structure of quasi-one-dimensional halogen-bridged binuclear metal complex Ni₂(dta)₄I (dta=CH₃CS₂⁻) was investigated by hybrid density functional theory. UB3LYP was successfully applied to reproduce averaged-valence spin density wave state. The magnetic interactions between Ni dimers were estimated by calculating effective exchange integrals (J_ab) using Ni₂(dta)₄I dimer and tetramer models. Calculated J values were consistent with that of experimental results. The natural orbital analysis of the broken-symmetry UB3LYP solution were performed to elucidate symmetry-adapted molecular orbitals and their occupation numbers. Several chemical indices such as polyradical character and information entropy were introduced on the basis of the occupation numbers to discuss the bonding character of MMX chain. All these indices supports that Ni₂(dta)₄I was in the strongly correlating electron system.     

The electronic spectrum of AuO: a combined theoretical and experimental study

The near-infrared electronic spectrum of AuO(1) has been re-examined in light of the new microwave data on the v = 0 and v = 1 vibrations of the X(2)Pi(3/2) state of AuO. The two observed bands in the spectrum, with red-degraded bandheads located at 10726 and 10665 cm(-1), have been reanalyzed. New theoretical work on AuO clarifies the electronic structure, and the bands in the infrared are now assigned as the (0,1) and (1,2) bands of the a(4)Sigma(-)(3/2) - X(2)Pi(3/2) transition, respectively.     

Fluorescence solvatochromism in lumichrome and excited-state tautomerization: a combined experimental and DFT study

Fluorescence solvatochromism of lumichrome (LC) was studied by steady-state and time-resolved fluorescence spectroscopy. The excited-state properties of LC do not show any correlation with solvent polarity, however, reasonably good correlation with solvent E(T)(30) parameter was observed. A quantitative estimation of contribution from different solvatochromic parameters, like solvent polarizability (π*), hydrogen bond donor (α), and hydrogen bond acceptor (β) ability of the solvent, was made using linear free energy relationship on the basis of Kamlet-Taft equation. The analysis reveals that hydrogen bond donating ability (acidity) of the solvent is the most important parameter that characterizes the excited-state behavior of lumichrome. Quantum mechanical calculations using density functional theory (DFT) were done to study the most stable structure and excited-state tautomerization process of LC toward the formation of isoalloxazines. Charge localization in the excited state and formation of hydrogen-bonded cluster through solvent hydrogen bond donation on the N10 atom of alloxazine moiety were predicted to be the key step toward this water-catalyzed tautomerization process.     

Influence of oxygen/sulfur-termination on electronic structure and surface electrostatic potential of (6,0) carbon nanotube: a DFT study

A density functional theory study was carried out to investigate the electronic and structural properties of oxygen- and sulfur-terminated models of zigzag (6,0) carbon nanotube (CNT). In general, the C–C bond lengths are significantly changed upon O/S-termination in the considered models. Our calculations indicate that due to the O/S-doping at the tip(s) of pristine CNT, the evaluated electron density tends to increase slightly at the axial C–C bond critical points. In order to characterize and provide valuable information of the origin of noncovalent interactions, electrostatic potentials are computed on the surface of the CNTs. Our results reveal that the characteristic surface patterns are considerably influenced by O/S-termination and the dopant atoms tend to activate the surface toward electrophilic/radical attack.     

DFT study of unligated and ligated manganese(II) porphyrins and phthalocyanines

A theoretical study of the electronic structure, bonding, and properties of unligated and ligated manganese(II) porphyrins and phthalocyanines has been carried out "in detail" using a density functional theory (DFT) method. While manganese tetraphenylporphine (MnTPP) in the crystal is high spin (S = 5/2) with the Mn(II) atom out of the porphyrin plane, the present calculations find that the free manganese porphine (MnP) molecule has no obvious tendency to distort from planarity even in the high-spin state. The ground state of the planar structure is found to be intermediate spin (S = 3/2). Manganese phthalocyanine (MnPc) is calculated to have a 4E(g) ground state, in agreement with the more recent magnetic circular dichroism (MCD) and UV-vis measurements of the molecule in an argon matrix but different from the early magnetic measurements of solid MnPc. The effect of the crystal structure on the electronic state of MnPc is examined by the calculations of a model system. For the six-coordinate adducts with two pyridine (py) ligands, the strong-field axial ligands raise the energy of the Mn d(z2)-orbital, thereby making the Mn(II) ion low spin (S = 1/2). The recent assignment of MnPc(py)2 as an intermediate-spin state proves to be incorrect. Some issues involved in the reduced products have also been clarified. Five-coordinate MnP(py) and MnPc(py) complexes are high spin and intermediate spin, respectively.     

Reactivity investigations of some chosen peroxo-vanadium(V), manganese(III) and chromium(VI) compounds

An interpretative account of the results of reactions in aqueous medium of a highly peroxygenated vanadium(V) complex, K [V(O_{2 3}]·3H₂O, with different organic and inorganic substrates is presented. The reactions were monitored by solution EPR spectroscopy and isolation of products at different stages of the reactions. Redox reactions between diperoxide, K[VO(O₂)₂(H₂O)] and VOSO₄ were conducted. The results of the investigation suggest that secondary oxygen exchange-reaction occurs which not only depends on but also utilises the intermediates in the primary reaction during diperoxovanadate-dependent oxidation of VOSO₄. In an interesting reactiontris(acetylacetonato)-manganese(III), Mn(acac)₃, on being reacted with a hydrogen peroxide adduct, KF·H₂O₂, and bpy and phen afforded crystalline [Mn(acac)₂(bpy)] and [Mn(acac)₂(phen)], respectively. The X-ray structural analysis of [Mn(acac)₂(phen)] showed that the compound crystallised in orthorhombic space groupPbcn. The structure consists of a pseudooctahedral Mn(II) ion being bound to two acac⁻(C₅H₅O ₂ ⁻ ) and a phen ligand with the molecule lying on two-fold axis. Reactivity profiles of two new chromium(VI) reagents viz., pyridinium fluorochromate, C₅H₅NH[CrO₃F] (PFC), and quinolinium fluorochromate C₉H₇NH [CrO₃F] (QFC), have been presented. The compounds are capable of acting as both electron-transfer and oxygen-atom-transfer agents. The X-ray analysis of PFC crystals reveals that the compound crystallises in the orthorhombic space group CmcZ₁. The structure consists of discrete pyridinium cations and CrO₃ F anions with no significant hydrogen bonding. This results in total disorder of the pyridinium cation. The tetrahedral [CrO₃ F]⁻ ion lies on a crystallographic mirror plane.     

Tris(bis(trimethylsilyl)amido)samarium: X-ray structure and DFT study

The compound Sm[N(SiMe(3))(2)](3) has been investigated experimentally by X-ray crystallography and computationally by DFT methods. The structure is analogous to that of other tris[bis(trimethylsilyl)amido]lanthanides, featuring positional disorder of the metal atom above and below the plane defined by the three N donor atoms, resulting in a trigonal pyramidal configuration. One of the methyl groups of each amido ligand is placed above the apex of the pyramid at close distance to the metal center suggesting the presence of agostic interactions. The DFT calculations have been carried out on the real molecule and on a Si[N(SiH(3))(SiH(2)Me)](3) model where the unique Me group was placed above the apex of the pyramid to probe the agostic interaction. In both cases, the optimized geometry reproduces very well the experimental structure and indicates the presence of beta-Si-C agostic interactions. A comparison of the optimized geometries obtained in the presence/absence of the Sm d and the Si d orbitals serves to illustrate the relevance of these orbitals for (i). the establishment of the pyramidal configuration at Sm, (ii). the Sm-N bond length, and (iii). the Sm-(beta-Si-C) bond length. The bonding analysis, which was carried out by both Mulliken and NBO methods, not only confirms the importance of the metal d orbitals for the Sm-N and Sm-(beta-Si-C) chemical bonding but also illustrates the relevance of electrostatic terms in the agostic interaction. Sm-N and N-Si pi bonding is present according to the bonding analysis but is not important for enforcing the planar configuration at N, nor the pyramidal configuration at Sm.     

The structure of the chiral Pt531 surface: a combined LEED and DFT study

The structure of the chiral kinked Pt531 surface has been determined by low-energy electron diffraction intensity-versus-energy (LEED-IV) analysis and density functional theory (DFT). Large contractions and expansions of the vertical interlayer distances with respect to the bulk-terminated surface geometry were found for the first six layers (LEED: d12 = 0.44 A, d23 = 0.69 A, d34 = 0.49 A, d45 = 0.95 A, d56 = 0.56 A; DFT: d12 = 0.51 A, d23 = 0.55 A, d34 = 0.74 A, d45 = 0.78 A, d56 = 0.63 A; dbulk = 0.66 A). Energy-dependent cancellations of LEED spots over unusually large energy ranges, up to 100 eV, can be explained by surface roughness and reproduced by applying a model involving 0.25 ML of vacancies and adatoms in the scattering calculations. The agreement between the results from LEED and DFT is not as good as in other cases, which could be due to this roughness of the real surface.     

Ab initio study of the electronic structure of manganese carbide

We report electronic structure calculations on 13 states of the experimentally unknown manganese carbide (MnC) using standard multireference configuration interaction (MRCI) methods coupled with high quality basis sets. For all states considered we have constructed full potential energy curves and calculated zero point energies. The X state, correlating to ground state atoms, is of 4sigma- symmetry featuring three bonds, with a recommended dissociation energy of D0 = 70.0 kcal/mol and r(e) = 1.640 angstroms. The first and second excited states, which also correlate to ground state atoms, are of 6sigma- and 8sigma- symmetry, respectively, and lie 17.7 and 28.2 kcal/mol above the X state at the MRCI level of theory.     

Electronic structure and vibrational spectra of cis-diammine(orotato)platinum(II), a potential cisplatin analogue: DFT and experimental study

Orotic acid (vitamin B₁₃) is a key intermediate in biosynthesis of the pyrimidine nucleotides in living organisms, moreover, it may serve as the biological carrier for some metal ions. cis-Diammine(orotato)platinum(II), cis-[Pt(C₅H₂N₂O₄)(NH₃)₂] can be considered as a new potential cisplatin analogue. The FT-Raman and FT-IR spectra of the title complex are reported, for the first time. The molecular structure, vibrational frequencies, and the theoretical infrared and Raman intensities have been calculated by the density functional mPW1PW91 method. The detailed vibrational assignment has been made on the basis of the calculated potential energy distribution. The theoretically predicted IR and Raman spectra show very good agreement with experiment. Natural bond orbital (NBO) analyses were performed for cisplatin, carboplatin and the title complex. The results provided new data on the nature of platinum–ligand bonding in these compounds. Strong intramolecular hydrogen bond between the orotate ligand and the coordinated ammonia group stabilizes the structure of the platinum(II) complex. Thus, it is suggested that the orotate ligand in the title complex is more inert to the substitution reactions than the chloride ligands in cisplatin.     

Probing the reactivity and electronic structure of a uranium(V) terminal oxo complex

Treatment of the U(III)-ylide adduct U(CH(2)PPh(3))(NR(2))(3) (1, R = SiMe(3)) with TEMPO generates the U(V) oxo metallacycle [Ph(3)PCH(3)][U(O)(CH(2)SiMe(2)NSiMe(3))(NR(2))(2)] (2) via O-atom transfer, in good yield. Oxidation of 2 with 0.85 equiv of AgOTf affords the neutral U(VI) species U(O)(CH(2)SiMe(2)NSiMe(3))(NR(2))(2) (3). The electronic structures of 2 and 3 are investigated by DFT analysis. Additionally, the nucleophilicity of the oxo ligands in 2 and 3 toward Me(3)SiI is explored.