Crystal and molecular structures of ionophore-siderophore host-guest supramolecular assemblies relevant to molecular recognition

Ionophore-siderophore host-guest assemblies composed of 18-crown-6 and ferrioxamine B, benzo-18-crown-6 and ferrioxamine B, and cis-syn-cis-dicyclohexano-18-crown-6 and ferrioxamine B were successfully crystallized, and their structures were determined by single-crystal X-ray diffraction. All three crystal lattices also include solvated Mg(II) and perchlorate ions. The ionophore-siderophore host-guest assembly is noncovalently held together by a hydrogen bonding interaction between the pendant protonated amine in the second coordination sphere of ferrioxamine B and the hydrogen bond acceptor oxygen atoms in the crown ether. The crystals of 18-crown-6:ferrioxamine B host-guest assembly are monoclinic, with space group P2(1)/c, and four molecules per unit cell with dimensions a = 19.8327(11) A, b = 20.4111(11) A, c = 15.1698(8) A, and beta = 96.435(1) degrees. The crystals of benzo-18-crown-6:ferrioxamine B host-guest assembly are triclinic, with space group P(-)1, and two molecules per unit cell with dimensions a = 11.1747(10) A, b = 16.0580(15) A, c = 18.4175(17) A, alpha = 80.469(3) degrees, beta = 81.481(3) degrees and gamma = 70.212(2) degrees. The crystals of cis-syn-cis-dicyclohexano-18-crown-6:ferrioxamine B host-guest assembly are monoclinic, with space group P2(1)/c, and four molecules per unit cell with dimensions a = 20.1473(13) A, b = 21.5778(15) A, c = 14.8013(10) A, and beta = 94.586(2) degrees. The crystal structures of all three host-guest assemblies contain a racemic mixture of Lambda-N-cis, cis and Delta-N-cis, cis coordination isomers of ferrioxamine B. The crystal structures indicate that the steric rigidity of the benzo-18-crown-6 and cis-syn-cis-dicyclohexano-18-crown-6 cavity has a pronounced effect on the conformation of the crown ring and ultimately on the hydrogen bonding interactions between the crown ethers and ferrioxamine B. The structural parameters and the conformational features of the ferrioxamine B guests compare very well with each other and with those of the ferrioxamine B structure obtained in the absence of a host. Structural features relevant to siderophore molecular recognition are discussed.     

Second-Sphere Coordination of Ferrioxamine B and Association of Deferriferrioxamine B, CH(3)(CH(2))(4)NH(3)(+), NH(4)(+), K(+), and Mg(2+) with Synthetic Crown Ethers and the Natural Ionophores Valinomycin and Nonactin in Chloroform

The interaction of ferrioxamine B, FeHDFB(+), through a protonated amine side chain, with various host ionophore structures to form a host-guest complex in the second coordination shell has been investigated. Host-guest association constants (K(a)) in water saturated chloroform are reported for synthetic crown ethers with different cavity size and substituents (18-crown-6 and its dicyclohexano, benzo, and dibenzo derivatives; dibenzo and dicyclohexano derivatives of 24-crown-8; and dibenzo-30-crown-10). The natural ionophores valinomycin and nonactin were also found to form stable second-sphere complexes with ferrioxamine B in wet chloroform. Results are reported for both picrate and perchlorate salts of FeHDFB(+). Since the protonated amine side chain of ferrioxamine B may be viewed as a substituted amine, the host-guest association constants for FeHDFB(+) are compared to the interaction of Mg(2+), K(+), NH(4)(+), CH(3)(CH(2))(4)NH(3)(+), and H(4)DFB(+) with the same ionophores. This is the first report of nonactin complexation of this series of cations in an organic medium of low polarity and one of the few reports of valinomycin complexation. To the best of our knowledge these are the first reported stability constants for the association of (Mg(2+),2pic(-)) with natural and synthetic ionophores in chloroform. K(a) values for ferrioxamine B complexation by the synthetic crown ethers are influenced by ring size and substituent. Despite significant preorganization capabilities, the large cavities of valinomycin, nonactin and benzo-30-crown-10 do not form as stable host-guest assemblies with bulky substituted amine cations such as ferrioxamine B as does cis-dicyclohexano-18-crown-6.     

Crown ether-based cryptand/tropylium cation inclusion complexes

Host–guest complexation between crown ether-based cryptand hosts and a carbonium ion, tropylium hexafluorophosphate was studied. ¹H NMR, NOESY NMR, and electrospray ionization mass spectrometry were employed to characterize these inclusion complexes. The contrast tests of ¹H NMR and association constants indicated that cryptands are much better hosts for tropylium hexafluorophosphate than the corresponding simple crown ethers. C–H?O hydrogen bonding, face-to-face π-stacking interactions, and charge-transfer interactions are thought to be the main driving forces for the formation of these host–guest complexes. These multiple non-covalent interactions may jointly contribute to the complex formation and considerably reinforce the complex stability. Moreover, the complexation between dibenzo-24-crown-8-based cryptand 4 and tropylium hexafluorophosphate 7 can be reversibly controlled by adding KPF₆ and then DB18C6 in 1:1 acetonitrile/chloroform, providing a new cation-responsive host–guest recognition motif for supramolecular chemistry.     

Macrocycles as components of gas-chromatographic phases

The use of crown compounds (18-crown-6, benzo-18-crown-6, dibenzo-18-crown-6, benzo-15-crown-5, dibenzo-24-crown-8, 4,13-diaza-18-crown-6,4,13-dibenzyl-diaza-18-crown-6, and cryptand [2.2.2]) as components of stationary phases in the determination of organic compounds by gas chromatography is studied. The polarity, selectivity, efficiency, and working temperature ranges of stationary phases based on crown ethers and cryptand as well as conventional stationary phases for gas chromatography are compared. The influence of the type and number of heteroatoms, the conformational lability of the cavity, and the presence of substituents on the polarity and selectivity of the stationary phases under study is revealed. Preferable types of interactions of stationary phases containing crown compounds with organic compounds of different classes are discussed. It is concluded that phases of the mixed type based on crown ethers are promising for improving the selectivity and efficiency of gas-chromatographic separation     

Complex Formation of Crown Ethers and Cryptands with Alkali Metal and Ammonium Ions in Chloroform

The complex formation between different crown ethers and the cryptand [222] with alkali metal and ammonium ions in chloroform has been investigated by means of calorimetric titrations. The stability constants, reaction enthalpies and entropies for complex formation in chloroform have been determined. The complexation of alkali metal ions is favored by enthalpic contributions and influenced by both the ligand and the nature of the cation. The reaction enthalpies for complex formation of different ammonium salts with cryptand [222] are higher compared to the corresponding values for the reaction with different 18-crown-6 derivatives in chloroform due to the complete encapsulation of ammonium ion by the cryptand [222]. The benzo group attached to the crown ethers and the nature of the anion borne by the ammonium ion influence complex formation of ammonium with crown ethers. In the case of ammonium salts, competitive measurements have been carried out to underline the influence of the anion upon the complex formation. From the reaction enthalpies for complexation of ammonium ions, the contributions for the formation of hydrogen bonds are calculated using experimental data. Taken in part from the Ph.D. thesis of R.-C. Mutihac, University Duisburg-Essen, 2007.     

Enolates de l'acetylacetate d'ethyle. Structure et reactivite du sel de potassium en presence d'ether couronne et de cryptand

It is shown that, through the addition of 18-crown-6 or cryptand (2.2.2) to potassium ethyl acetoacetate enolate solutions in tetrahydrofuran, 1:1 complexes are formed. A single crystal of the 1:1 potassium énolate-18-crown-6 complex has been obtained. Its structure has been determined by X-ray diffraction. The crystal includes entities formed from an enolate anion chelating a potassium cation externally complexed by the crown-ether. The vibrational spectrometry shows that the structure of the entity is kept in solution. In the species formed through the addition of cryptand (2.2.2), the enolate anion has a structure (IR spectroscopy) and a reactivity very close to that of the free anion, observed in a dissociating solvent (DMSO, HMPA). When crown ether is added, a contact ion pair is formed, in which the cation is externally solvated by the crown. On the other hand, the cation encapsulation by the cryptand leads to a released anion with an “ S-trans” or “W” structure. The reactivity and the orientation of the alkylation reactions of these entities have been measured in THF solutions. They are discussed in relation to the structure of the species present in the reaction medium.     

Preparation of a fixed-tetraphenylethylene motif bridged ditopic benzo-21-crown-7 and its application for constructing AIE supramolecular polymers

Benzo-21-crown-7(B21 C7) is one of the most important crown ethers,which not only shows excellent physicochemical properties but also exhibits promising binding capability with dialkylammonium salts.In this paper,we designed and synthesized a fixed-tetraphenylethylene(FTPE) motif bridged ditopic benzo-21-crown-7 molecule(H).The fixed tetraphenylethylene motif endows H with aggregation induced emission(AIE) prope rty.In the presence of a ditopic dialkylammonium salt guest molecule(G),a fluorescent supramolecular polymer with golden luminescent property could be fabricated.This B21 C7-based host-guest supramolecular polymer with golden fluorescence may have potential application in dynamic luminescent materials.     

Nature of the strong basicity of superbases,unsolvated hydroxide ions?

The basicity of so-called superbases is ascribed to the presence of free, i.e., naked, hydroxide ions. Infrared spectroscopic studies of various KOH (and KOCH₃) crown ether dicyclohexyl-18-crown-6 and dibenzo-18-crown-6) and Sr(OH)₂ cryptand(222) solutions in polar (methanol, chloroform) and non-polar solvents (toluene, n-heptane) revealed that unsolvated OH⁻ ions are not present in such strong basic solutions. Formation of potassium crown ether complexes shown by the i.r. bands at 1095–1102 and 990–995 cm⁻¹ (dicyclohexyl-18-crown-6) is always accompanied (and only possible if) by that of methoxide ions (i.r. band at 1050–1060 cm⁻¹). The presence of solvated OH⁻ ions cannot be excluded.     

Reaktionen von Kaliumiodomercurat(II) mit Kronenethern und Kryptanden: Kristallstrukturen von Bis[di(benzo-15-krone-5)kalium]-, Di[(benzo-18-krone-6)kalium]-, Di[(cryptand 221)kalium]und Di[(cryptand 222)kalium]-hexaiododimercurat(II)

Reactions of Potassium Iodomercurate(II) with Crown Ethers and Cryptands: Crystal Structures of Bis[di(benzo-15-crown-5)potassium]-, Di[(benzo-18-crown-6)potassium]-, Di[(cryptand 221)potassium]-, and Di[(cryptand 222)potassium] Hexaiododimercurate(II) The reactions of potassium iodomercurate(II) with the crown ethers benzo-15-crown-5, and benzo-18-crown-6, resp. as well as with the cryptands 221 and 222 were investigated. In all cases only the potassium ion was complexed. As anions only hexaiododimercurate(II) ions were formed but no higher oligomers. If the complexed potassium ion is not completely shielded by the ligand, further coordination by terminal iodine atoms of the mercurate anions takes place, leading to the formation of dimers or chains.     

Bis(m-phenylene)-32-crown-10-based cryptands, powerful hosts for paraquat derivatives

Four new bis(m-phenylene)-32-crown-10-based cryptands with different third bridges were prepared. Their complexes with paraquat derivatives were studied by proton NMR spectroscopy, mass spectrometry, and X-ray analysis. It was found that these cryptands bind paraquat derivatives very strongly. Specifically, a diester cryptand with a pyridyl nitrogen atom located at a site occupied by either water or a PF(6) anion in analogous complexes exhibited the highest association constant K(a) = 5.0 x 10(6) M(-1) in acetone with paraquat, 9000 times greater than the crown ether system. X-ray structures of this and analogous complexes demonstrate that improved complexation with this host is a consequence of preorganization, adequate ring size for occupation by the guest, and the proper location of the pyridyl N-atom for binding to the beta-pyridinium hydrogens of the paraquat guests. This readily accessible cryptand is one of the most powerful hosts reported for paraquats.     

酚醛冠醚共缩聚物的合成与性能

用2,6-二羟甲基-4-苯基苯酚分别与二苯并-18-冠-6(2B18C6)、二苯并-24-冠-8(2B24C8)、二苯并-30冠-10(2B30C10)、苯并-15-冠-5(B15C5)、苯并-18-冠-6(B18C6)缩聚合成了五种酚醛型冠醚共聚物。我们用聚冠醚的氯仿溶液萃取苦味酸碱金属盐水溶液,研究了它们对金属离子的络合性能。结果表明,聚冠醚(PB15C5)和(PB18C6)的萃取能力和选择性显著优于相应的单冠醚。     

The unusual course of the high-pressure reaction of 1,10-diaza-[18]-crown-6 with α,ω-diiodo ethers

Simple 1,10-diaza-[18]-crown-6 reacts smoothly with di(2-indoethyl)ether under high-pressure (10 kbar) to give a bis-quaternary spiro salt as a major product, whereas the analogous reaction with 1,8-diiodo-3,6-dioxaoctane leads to the expected precursor of a [2.2.2] cryptand.     

Synthesis of large ring proton cryptate tridecalino [2.2.2] cryptand⊃2hI

Condensation of 8,9:17,18-didecalino-4,13-diaza-18-crown-6 with 1,8-diiodo-4,5-decalino-3,6-dioxaoctane in the presence of sodium carbonate produced proton cryptate, tridecalino[2.2.2]cryptand⊃2HI.     

大环疏水效应: 冠醚在DMF+H2O混合物中的焓对作用

利用等温滴定微量热法测定了298.15 K时12-冠-4、15-冠-5、18-冠-6和4,13-二氮杂-18-冠-6四种冠醚在纯水及不同质量分数(w=0-0.3)的N,N-二甲基甲酰胺(DMF)+H₂O混合物中的稀释焓, 根据McMillan-Mayer理论计算得到相应的焓对作用系数(h_xx). 实验发现, h_xx均为较大的正值, 表明在冠醚-冠醚自相互作用中疏水性成分占绝对优势, 主要表现为两种机制: (1) 当疏水-疏水作用发生时, 共球交盖使得水结构形成减少, 对h_xx有正的贡献; (2) 当疏水-亲水作用发生时, 共球交盖使得水结构破坏增加, 对h_xx有正的贡献. 此外, 四种冠醚h_xx的大小关系为: h_xx(18-冠-6)>h_xx(4,13-二氮杂-18-冠-6)≈h_xx(15-冠-5)>h_xx(12-冠-4), 表明冠醚环越大, 疏水-疏水作用越强, 存在显著的大环疏水效应.     

Synthesis and properties of new thiourea-functionalized poly(propylene imine) dendrimers and their role as hosts for urea functionalized guests

Five generations of poly(propylene imine) dendrimers have been modified by palmityl and adamantyl endgroups via a thiourea linkage. The synthesis of the thiourea dendrimers DAB-dendr-(NHCSNHAd)(n) and DAB-dendr-(NHCSNHC(16)H(33))(n) (n = 4, 8, 16, 32, 64) proceeds smoothly via the amino-terminated DAB dendrimer and the adamantyl and palmityl isothiocyanates, respectively. The properties of the thiourea dendrimers have been studied by IR and (1)H NMR, including relaxation (T1, T2) measurements. The thiourea dendrimers are used as multivalent hosts for a number of guest molecules containing a terminal urea-glycine unit in organic solvents. The host-guest interactions have been investigated using 1D- and NOESY-NMR. These investigations show that the guest molecules bind to the dendritic host via thiourea (host)-urea (guest) hydrogen bonding, and ionic bonding between the terminal guest carboxylate moiety and the outer shell tertiary amines of the dendrimer. The ability to bind guest molecules of the adamantyl- and palmitylthiourea dendrimers has been compared with their respective urea containing dendrimer analogues, by NMR-titration, and competition experiments. Upon complexation, the thiourea dendrimer hosts show a larger downfield NH shift than the corresponding urea dendrimer hosts, indicative of stronger hydrogen bonding in the complexed state. Furthermore, microcalorimetry has been used to determine binding constants for formation of the host-guest complexes; the binding constants are typically in the order of 10(4) M(-1). Both NMR and microcalorimetric studies show that the thiourea dendrimers bind the urea containing guests with somewhat higher affinity than the corresponding urea dendrimers.     

Hydroxymethyl 18-crown-6 and hydroxymethyl [2.2.2]cryptand: versatile derivatives for binding the two polyethers to lipophilic chains and to polymer matrices

The presence of the hydroxymethyl group allows facile functionalisation of 18-crown-6 and of [2.2.2]cryptand. A variety of lipophilic and polymer-supported macrocyclic polyethers is thus available. They are efficient and easily recyclable phase-transfer catalysts.     

Ion pairing in fast-exchange host-guest systems: concentration dependence of apparent association constants for complexes of neutral hosts and divalent guest salts with monovalent counterions

An equilibrium treatment of complexation of neutral hosts with dicationic guests having univalent counterions includes two possible modes: (1) dissociation of the ion pair prior to interaction of the free dication with the host to produce a complex that is not ion paired and (2) direct complexation of the ion pair to produce an ion paired complex. This treatment is easily modified for complexation of neutral guests by dianionic hosts, or divalent hosts by neutral guests. The treatment was tested by a study of fast-exchange host-guest systems based on paraquats or viologens (G(2+)2X(-)) and crown ethers (H). The bis(hexafluorophosphate) salts of viologens are predominantly ion paired in acetone; the value of the dissociation constant of paraquat bis(hexafluorophosphate) was determined to be 4.64 (+/- 1.86) x 10(-4) M(2). The complex based on dibenzo-24-crown-8 and paraquat bis(hexafluorophosphate) is not ion paired in solution, resulting in concentration dependence of the apparent association constant K(a,exp), (= [complex]/[H][G(2+)2X(-)]) which is well fit by the treatment, according to mode (1), yielding K(ap) = 106 (+/-42) M(-1). However, the four complexes of two different bis(m-phenylene)-32-crown-10 derivatives and bis(p-phenylene)-34-crown-10 with paraquat derivatives are all ion paired in solution and therefore K(a,exp) is not concentration dependent for these systems, mode (2). X-ray crystal structures support these solution-based assessments in that there is clearly ion pairing of the cationic guest with its PF(6)(-) counterions in the solid states of the latter four examples in which access of the counterions to the guests is granted by the relatively large cavities of the hosts and dispositions of the guest species within them.     

Cation transport at 25°c from binary Na+Mn+, Cs+Mn+ and Sr2+Mn+ nitrate mixtures in a H2OCHCl3H2O liquid membrane system containing a series of macrocyclic carriers

Cation fluxes from binary mixtures of either Na⁺, Cs⁺ or Sr²⁺ with other alkali metal cations, alkaline earth metal cations, and Pb²⁺ through a H₂OCHCl³H₂O bulk liquid membrane system containing one of several macrocyclic carriers have been determined Nitrate salts were used in all cases. The most selective transport of Na⁺ over all other cations studied was found with the carrier cryptand [2.2.1]. Selective transport of Na⁺ relative to Li⁺, Cs⁺ and the alkaline earth cations was found with cryptand [2.2.2B] and cryptand [2.2.2D]. The ligands 21-crown-7 and dibenzo-24-crown-8 showed selective transport of Cs⁺ over the second cation in all cases. Several macrocycles showed selectivity for Sr²⁺ over the second cation with the macrocycle 1,10-diaza-18-crown-6 showing the highest selectivity for this cation of all ligands studied. Relative fluxes from binary cation mixtures are rationalized in terms of macrocycle cavity size, donor atom type and ring substituents.     

A 39K NMR study of potassium solution in tetrahydrofuran containing cryptand[2.2.2]

By means of ³⁹K NMR spectroscopy the presence of potassium anions and complexed potassium cations in blue potassium solutions in THF containing cryptand[2.2.2] was evidenced. Spin-lattice and spin-spin relaxation was studied in the temperature range 178–238 K. The comparison of relaxation behaviour of the investigated system with that of potassium solutions containing 18-crown-6 or tetraglyme instead of cryptand[2.2.2] revealed the major influence of the complexing agent on interactions of K⁺ with its counterion.     

Effect of the 18-crown-6 and benzo-18-crown-6 on the solvent extraction and separation of lanthanide(III) ions with 8-hydroxyquinoline

The synergistic solvent extraction of 13 lanthanides with mixtures of 8-hydroxyquinoline (HQ) and the crown ethers (S) 18-crown-6 (18C6) or benzo-18-crown-6 (B18C6) in 1,2-dichloroethane has been studied. The composition of the extracted species has been determined as LnQ₃ · S. The values of the equilibrium constant and separation factor have been calculated. Here, the effect of the synergistic agent (18C6 or B18C6) on the extraction process is discussed.