Synthesis,characterization, and biological activity of Cd(II) and Mn(II) coordination polymers based on pyridine-2,6-dicarboxylic acid

The coordination polymers (CPs) {[Cd(Pydc)(H₂O)₃] · PydcH₂} (I) and [Mn(Pydc)(H₂O)₃] · PydcH2} (II) were obtained by the reaction of CdSO₄ · 5H₂O or MnCl₂ · 4H₂O with pyridine-2,6-dicarboxylic acid (PydcH₂). The structures of the CPs I and II were characterized by IR, UV-Vis, TGA, and X-ray single crystal analysis (CIF files CCDC nos. 1417757 (I), 1417758 (II)). The network structures of I and II are constructed by an infinite number of discrete binuclear molecules and free PydcH2. The structures of the CPs I and II connected by the extensive H-bonds and π–π stacking, forming a 3D-network. The CPs I and II were screened to test their antimicrobial activities against different species of bacteria and fungi.     

Synthesis and characterization of metal-organic frameworks based on 4-hydroxypyridine-2,6-dicarboxylic acid and pyridine-2,6-dicarboxylic acid ligands

The self-assembly of 4-hydroxypyridine-2,6-dicarboxylic acid (H(3)CAM) and pyridine-2,6-dicarboxylic acid (H2PDA) with Zn(II) salts under hydrothermal conditions gave two novel coordination polymers {[Zn(HCAM)].H2O}n (1) and {[Zn(PDA)(H2O)(1.5)]}n (1a). 1 and 1a comprise of a 2D (4,4) net and a 1D zigzag chain, respectively, in which a new coordination mode of PDA is found. The reactions of H(3)CAM and H2PDA with Nd2O3 in the M/L ratio 2:3 gave {[Nd2(HCAM)3(H2O)4].2H2O}n (2) and {[Nd(2)(PDA)3(H2O)(3)].0.5H2O}n (2a). In 2, a square motif as a building block constructed by four Nd(III) ions was further assembled into a highly ordered 2D (4,4) grid. 2a is a 3D microporous coordination polymer. It is interesting to note that, when Ln(III) salts rather than oxides were employed, the reaction produced {[Ln(CAM)(H2O)3].H2O}n (Ln = Gd, 3; Dy, 4; Er, 5) for H(3)CAM and {[Gd2(PDA)3(H2O)3].H2O}n (3a) for H2PDA. 3-5 are 2D coordination polymers with a 3(3)4(2) uniform net, where hydroxyl groups of H3CAM coordinate with metal ions. The reaction of H3CAM and Er2O3 instead of Er(ClO4)3 produced {[Er2(HCAM)3(H2O)4].2H2O}n (6). The compounds 2a and 3a, 2 and 6 are isomorphous. The stereochemical and supramolecular effects of hydroxyl groups result in the dramatic structural changes from 1D (1a) to 2D (1) and from 2D (2) to 3D (2a). When Ln(III) salts instead of Ln2O3 were employed in the hydrothermal reactions with H(3)CAM, different self-assembly processes gave the products of different metal/ligand ratio with reactants (3-5).     

Supramolecular structure of the polymeric Eu(III) complex with pyridine-2,6-dicarboxylic acid

The europium complex with pyridine-2,6-dicarboxylic acid forms three-dimensional polymers in the solid state. The crystal structure of this assembly shows that europium cation is nine-coordinated and the first coordination sphere contains four water molecules. Mono(dipicolinate) structural units are interconnected by bridging carboxylate oxygens to provide a compact supramolecular structure with a high density.     

Polycondensation of pyridine-2,6-dicarboxylic acid with some di- and tetraamino compounds

Pyridine-2,6-dicarboxylic acid phenyl ester was condensed with 3,3′-diaminobenzidine and 3,3′,4,4′-tetraaminodiphenyl ether. Polyamides were also synthesized by condensation of the above ester with p-phenylenediamine, benzidine, 4,4′-diaminodiphenyl sulfide and 4,4′-diaminodiphenyl sulfone. These amides had higher inherent viscosities and greater thermal stability than was reported before. Model compounds of imidazoles were prepared by condensation of the same ester with o-phenylenediamine and 2,3-diaminopyridine and of polyamides by condensation with aniline and 2-aminopyridine. In the case of the polyimidazole, the completely closed ring of imidazole did not form. The ultraviolet spectra of model compounds were compared with those of the polymers. The thermogravimetric curves show that the polymers are stable up to more than 400°C under argon atmosphere. All polymers were insoluble in most organic and inorganic solvents. They dissolved only partially in DMSO and DMF. Inherent viscosity was measured for the soluble polymer fraction.     

Gravimetric determination of uranium(VI) with pyridine-2,6-dicarboxylic acid

Uranium(VI) can be quantitatively precipitated from aqueous solution in the pH range 2.1-6.9 with pyridine-2,6-dicarboxylic acid in the presence of tetraphenylarsonium chloride. This provides a new rapid gravimetric method for uranyl ion as an organic chelate complex of high molecular weight. Sodium, aluminium, copper and nickel as well as nitrate, chloride, sulphate and acetate ions, do not interfere, but iron(III) and thorium(IV) do.     

Synthesis,structure and thermochemical study of a cobalt energetic coordination compound incorporating 3,5-diamino-1,2,4-triazole and pyridine-2,6-dicarboxylic acid

An energetic coordination compound [Co₂(C₂H₅N₅)₂(C₇H₃NO₄)₂(H₂O)₂]·2H₂O (Hdatrz(C₂H₅N₅) = 3,5-diamino-1,2,4-triazole, H₂pda(C₇H₅NO₄) = pyridine-2,6-dicarboxylic acid) has been synthesized and characterized by elemental analysis, chemical analysis, IR spectroscopy, single-crystal X-ray diffraction and thermal analysis. X-ray diffraction analysis confirmed that the compound possessed a di-nuclear unit and featured a 3D super-molecular structure. Furthermore, a reasonable thermochemical cycle was designed based on the preparation reaction of the compound and the standard molar enthalpy of dissolution of reactants and products was measured by the RD496-2000 calorimeter. Finally, the standard molar enthalpy of formation of the compound was determined to be −(2475.0 ± 3.1) kJ · mol⁻¹ in accordance with Hess’s law. In addition, the specific heat capacity of the compound at T = 298.15 K was determined to be (1.13 ± 0.02) J · K⁻¹ · g⁻¹ by RD496-2000 calorimeter.     

Synthesis,structural characterization,and thermochemistry of complexes of pyridine 2,6-dicarboxylate with metals (Mg and Sr)

Two novel complexes [Mg(DPC)(H₂O)₃]·2H₂O(s) and Sr₂(H₂DPC)₂(HDPC)₂(DPC)(H₂O)₂(s) were synthesized by the method of liquid phase reflux. X-ray crystallography, chemical analysis, and elemental analysis were applied to characterize the structures and compositions of the two complexes. Low-temperature heat capacities of the complexes were measured over the temperature ranges from 78 to 350 and 78 to 352 K for [Mg(DPC)(H₂O)₃]·2H₂O(s) and Sr₂(H₂DPC)₂(HDPC)₂(DPC)(H₂O)₂(s), respectively. The polynomial regressions as a function of temperature were carried out through least square fitting method according to the experiment points. The polynomial fitted values of the molar heat capacities and the thermodynamic functions relative to the standard reference temperature 298.15 K based on the polynomial equations were derived. In addition, thermal behavior of the two compounds was investigated by thermal analysis techniques, differential scanning calorimetry/thermogravimetric analysis.     

Efficient Synthesis of 3-(4-Carboxyphenyl)pyridine-2,6-dicarboxylic Acid

Russian Journal of Organic Chemistry - An efficient synthetic approach to 3-(4-carboxyphenyl)pyridine-2,6-dicarboxylic acid has been developed on the basis of “1,2,4-triazine”...     

Copper(II) complexes with pyridine-2,6-dicarboxylic acid from the oxidation of copper(I) iodide

Via an oxidation reaction of Cu(I) iodide with pyridine-2,6-dicarboxylic acid (H₂L) in DMF three copper(II) complexes, [(CH₃)₂NH₂]₂[CuL₂] (1), K₂[CuL₂]?H₂L?H₂O (2) and [Cu(L)(H₂O)]_n (3), were synthesized and characterized. The structures of 1–3 were determined by single crystal X-ray diffraction studies. In-situ DMF decomposition produces dimethylamine base under solvothermal conditions and a proton transfer reaction takes place for the complex formation of 1. 3-D networks are stabilized in 1 and 2 via hydrogen bonds. Complex 3 is a 1-D coordination polymer with Cu-O semi-coordination bonds. Thermal decomposition of the complexes results in the corresponding metal oxides. Also, the electrochemical behavior of 1 was determined to be a metal-centered and diffusion-controlled, one-electron reduction process.     

Syntheses,crystal, molecular structures,and solution studies of Cu(II), Co(II), and Zn(II) coordination compounds containing pyridine-2,6-dicarboxylic acid and 1,4-pyrazine-2,3-dicarboxylic acid: comparative computational studies of Cu(II) and Zn(II) complexes

Structural Chemistry - Three new coordination compounds of Cu(II), Co(II), and Zn(II) based on different dicarboxylic acids formulated as (AcrH)[Cu(pydc)(pydcH)]·5H2O (1)...     

Synthesis,characterization and crystal structure of a novel three-dimensional supramolecular architecture formed by manganese(II) and pyridine-2,5-dicarboxylic acid

A novel three-dimensional supramolecular compound formed by Mn(II) and pyridine-2,5-dicarboxylic acid of formula [Mn(Pydc)₂(H₂O)₂] (Pydc?=?pyridine-2,5-dicarboxylic acid) has been synthesized and characterized by elemental analyses, IR, electronic spectra, thermogravimetric analysis and X-ray diffraction techniques. The X-ray structure shows that the central Mn(II) ion is coordinated by two water molecules and two chelated Pydc ligands. Water molecules coordinate with Mn(II) ions in the cis mode. Intermolecular hydrogen bonds play an important role in stabilization of the lattice and construction of the supramolecular network.     

Determination of submicromolar amounts of uranium(VI) by compleximetric titration with pyridine-2,6-dicarboxylic acid

Uranium(VI) is selectively determined by a compleximetric titration with pyridine-2,6-dicarboxylic acid, using arsenazo-I indicator and hexamethylenetetramine buffer at pH 4.9. Cyclohexanediaminetetraacetic acid and diethylenetriaminepentaacetic acid provide masking of interfering metal ions. A probe colorimeter apparatus is recommended for end-point detection. The relative standard deviation is 0.6% for 0.17–0.76 μmol of uranium.     

Synthesis and crystal structure of a 1D coordination polymer constructed by cobalt with 4-hydroxypyridine-2,6-dicarboxylic acid

A new one-dimensional chain complex [Co₃(Hpda)₂(H₂O)₈] _n (I), where HpdaH₃ = 4-hydroxypyridine-2,6-dicarboxylic acid, has been synthesized and characterized structurally. It crystallizes in the triclinic space group $P\bar 1$ with a = 7.3718(11), b = 8.4881(13), c = 9.4513(14) Å; α = 110.3300(10)°, β = 100.7470(10)°, γ = 95.338(2)°, V = 536.77(14) ų, C₁₄H₂₀Co₃N₂O₁₈, Mr = 681.11, Z = 1, ρ_c = 2.107 g/cm³, μ = 2.390 mm^?1, F(000) = 343, R = 0.0182 and wR = 0.0486 for 1893 observed reflections with I > 2σ(I). Complex I possesses a one-dimensional (1D) chain structure composed of continuous trinuclear Co(II) clusters, which further forms a three-dimensional (3D) supramolecular architecture via hydrogen bonds.     

Hydrothermal synthesis and crystal structures of two novel rare earth coordination polymers based on pyridine-2,6-dicarboxylic acid

Two novel rare earth coordination polymers, [La(pydc)₂(H₂O)][La(pydc)(H₂O)₂]·H₂O (1) and [Sm(pydc)₂(H₂O)][Sm(pydc)(H₂O)₂]·H₂O (2) (pydc=pyridine-2,6-dicarboxylate) were hydrothermally synthesized and characterized by the elemental analyses, IR spectra and TG analyses. Single crystal X-ray diffractions show that 1 and 2 are isostructural compounds. In the compounds of 1 and 2, the 1D lanthanide helical chains are connected each other by lanthanide binuclear dimer as building blocks to form a novel 3D covalent framework.     

Separation of f-elements by resins impregnated with amides of pyridine-2,6-dicarboxylic acid

Chemistries of trivalent lanthanides and actinides under aqueous processing conditions are so similar that their satisfying separation is extremely challenging. Preparation of a functionalized solid material by impregnation of a support resin with an organic extraction phase is one of possible routes for novel materials development. The ortho- and para-dialkyl-diaryl-pyridine-2,6-dicarboxyamides were impregnated into two macroporous matrices (PS-DVB and PMA). Influence of the diamide structure, matrix type and conditions for effective extraction chromatography separation of Am(III) from Eu(III) was studied in dynamic conditions. The prepared sorbents exhibited more strong adsorptions of Am(III) to compare with Eu(III). Maximal separation factor (~ 90) was achieved with use of citrate ion as complexing eluent.

     

Synthesis,crystal structure,and density functional theory study of a zinc(II) complex containing terpyridine and pyridine-2,6-dicarboxylic acid ligands: Analysis of the interactions with amoxicillin

An octahedral zinc(II) complex of 2,2′:6′,2″-terpyridine (Tpy) and pyridine-2,6-dicarboxylate (Pydc), [Zn(II)(Tpy)(Pydc)·4H₂O] was synthesized and its structure was determined by a single-crystal X-ray diffraction. The ligand pyridine-2,6-dicarboxylate coordinated to the zinc(II) ion via two pairs of carboxylate oxygens and one nitrogen atom, whereas 2,2′:6′,2″-terpyridine also contributed three coordination bonds through its nitrogen atoms. [Zn(II)(Tpy)(Pydc)·4H₂O] showed luminescence properties between 412 and 435 nm in DMSO. The solid-state octahedral geometry of [Zn(II)(Tpy)(Pydc)·4H₂O] was also preserved in solution as confirmed by the observed UV λ_ex = 346. Experimental and theoretical studies indicated that [Zn(II)(Tpy)(Pydc)·4H₂O] interacted with amoxicillin. Density functional theory calculations at B3LYP/LanL2dz level of theory suggested that [Zn(II)(Tpy)(pydc)·4H₂O] dimer interacts with (2S,5R,6R)-6-{[(2R)-2-amino-2-(4-hydroxyphenyl)-acetyl]amino}-3,3-dimethyl-7-oxo-4-thia-1-azabicyclo[3.2.0]heptane-24-carboxylic acid (amoxicillin) via highest occupied molecular orbital and lowest unoccupied molecular orbital, π–π interaction, hydrogen bond interaction, and van der Waals forces, thus influencing [Zn(II)(Tpy)(Pydc)·4H₂O] properties.     

Synthesis, crystal structure and properties of two 1D nano-chain coordination polymers constructed by lanthanide with pyridine-3,4-dicarboxylic acid and 1,10-phenanthroline

The hydrothermal reactions of LnCl₃·6H₂O (Ln=Eu, Tb), pyridine-3,4-dicarboxylic acid (3,4-pydaH₂), 1,10-phenthroline (phen) and NaOH in aqueous medium yield two metal-organic hybrid materials, [Eu₂(3,4-pyda)₃(phen)(H₂O)·H₂O]_n (1) and [Tb₂(3,4-pyda)₃(phen)(H₂O)·H₂O]_n (2), respectively. Both compounds have similar topology structure containing one-dimensional nano-chain, which is further assembled into a three-dimensional supramolecular network via π-π stacking interactions and hydrogen bonds. To the best of our knowledge, they represent the first example of nano-chain coordination polymers constructed by 3,4-pydaH₂ and chelate heterocylic ligand. Interestingly, the 3,4-pyda anion exhibits three kinds of coordination modes in these complexes. The coordination modes of 3,4-pyda in complexes 1 and 2 have not been observed in other coordination polymers containing 3,4-pyda ligands. Compounds 1 and 2 exhibit strong fluorescent emission bands in the solid state at room temperature. Their magnetic analyses show that they exhibit different magnetic interactions.