化学键理论对研究高T_C超导材料的作用

本文从化学键的观点出发综述了近年来高温超导体的合成。结构及性能关系,特别强调了化学在研究超导材料中的作用。     

Mechanochemical Preparations of Anion Coordinated Architectures Based on 3-Iodoethynylpyridine and 3-Iodoethynylbenzoic Acid

The halogen bond has previously been explored as a versatile tool in crystal engineering and anion coordination chemistry, with mechanochemical synthetic techniques having been shown to provide convenient routes towards cocrystals. In an effort to expand our knowledge on the role of halogen bonding in anion coordination, here we explore a series of cocrystals formed between 3-iodoethynylpyridine and 3-iodoethynylbenzoic acid with halide salts. In total, we report the single-crystal X-ray structures of six new cocrystals prepared by mechanochemical ball milling, with all structures exhibiting C≡C−I⋅⋅⋅X⁻ (X=Cl, Br) halogen bonds. Whereas cocrystals featuring a pyridine group favoured the formation of discrete entities, cocrystals featuring a benzoic acid group yielded an alternation of halogen and hydrogen bonds. The compounds studied herein were further characterized by ¹³C and ³¹P solid-state nuclear magnetic resonance, with the chemical shifts offering a clear and convenient method of identifying the occurrence of halogen bonding, using the crude product obtained directly from the mechanochemical ball milling. Whereas the ³¹P chemical shifts were quickly able to identify the occurrence of cocrystallization, ¹³C solid-state NMR was diagnostic of both the occurrence of halogen bonding and of hydrogen bonding.     

(TiNi)_x(x=2~4)团簇结构和电子结构

从团簇角度对TiNi形状记忆合金进行了量子化学从头算研究。设计并优化了等原子比(TiNi)x(x=2~4)簇的多种可能几何结构,并对较稳定构型进行电子结构的分析。结果表明,等原子比的(TiNi)n团簇以TiNi成键为主要分子骨架,小团簇有较多能量接近的异构体,TiTi成键对能量降低有较大贡献。     

Synthesis and Crystal Structures of Hydrogen Monofluorophosphates with N‐containing Organic Cations. The Influence of Fluorine on their Hydrogen Bond Systems

The synthesis and crystal structures of guanidinium monofluorophosphate and hydrogen monofluorophosphates with the following cations: piperazinium, di‐ and triethylammonium, guanidinium, and dimethyluronium, are described and discussed. The structures of the acid salts consist of hydrogen‐bonded HPO₃F tetrahedra, which form infinite chains or cyclic dimers. The organic cations link these units together. All of the hydrogen bond systems observed consist of short O—H···O and longer N—H···O bonds. No O—H···F or N—H···F bonds were found. The F atom avoids hydrogen acceptor positions in the structures. The thermal behavior of [NHEt₃]HPO₃F was also studied.     

Studies on Hydrogen Bonding Network Structures of Konjac Glucomannan

In this paper, the hydrogen bonding network models of konjac glucomannan （KGM） are predicted in the approach of molecular dynamics （MD）. These models have been proved by experiments whose results are consistent with those from simulation. The results show that the hydrogen bonding network structures of KGM are stable and the key linking points of hydrogen bonding network are at the O（6） and O（2） positions on KGM ring. Moreover, acety has significant influence on hydrogen bonding network and hydrogen bonding network structures are more stable after deacetylation.     

Crystal Engineering Using Polyiodide Halogen and Chalcogen Bonding to Isolate the Phenothiazinium Radical Cation and Its Rare Dimer, 10-(3-Phenothiazinylidene)phenothiazinium

Utilizing facile one-electron oxidation of 10H-phenothiazine by molecular diiodine, the solid-state structure of the 10H-phenothiazinium radical cation was obtained in three cation:iodide ratios, as well as its THF and acetone solvates. Oxidation of 10H-phenothiazine with molecular diiodine in DMSO or DMF provided the structure of the radical coupling product 10-(3-phenothiazinyldene)phenothiazinium, which has not been crystallographically characterized to date. The radical cations were balanced by a mixture (I₇)⁻, (I₅)⁻, (I₃)⁻, and I⁻ anions, where a variety of chalcogen, halogen, and hydrogen bonding interactions stabilize the structures to reveal these interesting cationic species.     

Water–Water and Water–Solute Interactions in Microsolvated Organic Complexes

A structural study of microsolvated clusters of β‐propiolactone (BPL) formed in a pulsed molecular jet expansion is presented. The rotational spectra of BPL–(H₂O)_n (n=1–5) adducts have been analyzed by broadband microwave spectroscopy. Unambiguous identification of the structures has been achieved using isotopic substitution and experimental measurements of the cluster dipole moment. The observed structures are discussed in terms of the different intermolecular interactions between water molecules and between water and BPL, which include n–π* interactions involving the lone pairs of electrons on water oxygen atoms and the antibonding orbital of the BPL carbonyl group. The changes induced in the structures of the water hydrogen‐bonding network by complexation to BPL indicate that water clusters adopt specific configurations to maximize their links to solute molecules.     

Not Your Usual Bioisostere: Solid State Study of 3D Interactions in Cubanes

Previous studies by Desiraju and co-workers have implicated the acidic hydrogen atoms of cubane as a support network for hydrogen bonding groups. Herein we report a detailed structural analysis of all currently available 1,4-disubstituted cubane structures with an emphasis on how the cubane scaffold interacts in its solid-state environment. In this regard, the interactions between the cubane hydrogen atoms and acids, ester, halogens, ethynyl, nitrogenous groups, and other cubane scaffolds were cataloged. The goal of this study was to investigate the potential of cubane as a substitute for phenyl. This could be achieved by analyzing all contacts that are directed by the cubane hydrogen atoms in the X-ray crystal structures. As a result, we have established several new cubane interaction profiles, such as the catemer formation seen in esters, the preferences of halogen–hydrogen contacts over direct halogen bonding, and the stabilizing effects caused by the cubane hydrogen atoms interacting with ethynyl groups. These interaction profiles can then be used as a guide for designing cubane bioisosteres of known materials and drugs containing phenyl moieties.     

Density functional theory study of the interaction between formamide and uracil

The hydrogen bonding of complexes formed between the formamide and uracil molecule has been fully investigated in the present study using the density functional theory (DFT) method at varied basis set levels from 6‐31G to 6‐311++G(d,p). Eight stable cyclic structures with two hydrogen bonds involved in the interaction are found on the potential energy surface (PES). The four structures are seven‐membered rings; the others are eight‐membered rings. The eight‐membered ring is preferred over the seven‐membered one by analyzing the hydrogen bond lengths and the interaction energies. The infrared (IR) spectrum frequencies, IR intensities, and the vibrational frequency shifts are reported. © 2006 Wiley Periodicals, Inc. Int J Quantum Chem, 2007     

Comparison of Hydrogen and Gold Bonding in [XHX]−, [XAuX]−, and Isoelectronic [NgHNg]+, [NgAuNg]+ (X=Halogen,Ng=Noble Gas)

Quantum chemical calculations at the MP2/aug‐cc‐pVTZ and CCSD(T)/aug‐cc‐pVTZ levels have been carried out for the title compounds. The electronic structures were analyzed with a variety of charge and energy partitioning methods. All molecules possess linear equilibrium structures with D_∞h symmetry. The total bond dissociation energies (BDEs) of the strongly bonded halogen anions [XHX]^? and [XAuX]^? decrease from [FHF]^? to [IHI]^? and from [FAuF]^? to [IAuI]^?. The BDEs of the noble gas compounds [NgHNg]⁺ and [NgAuNg]⁺ become larger for the heavier atoms. The central hydrogen and gold atoms carry partial positive charges in the cations and even in the anions, except for [IAuI]^?, in which case the gold atom has a small negative charge of ?0.03 e. The molecular electrostatic potentials reveal that the regions of the most positive or negative charges may not agree with the partial charges of the atoms, because the spatial distribution of the electronic charge needs to be considered. The bonding analysis with the QTAIM method suggests a significant covalent character for the hydrogen bonds to the noble gas atoms in [NgHNg]⁺ and to the halogen atoms in [XHX]^?. The covalent character of the bonding in the gold systems [NgAuNg]⁺ and [XAuX]^? is smaller than in the hydrogen compound. The energy decomposition analysis suggests that the lighter hydrogen systems possess dative bonds X^?→H⁺←X^? or Ng→H⁺←Ng while the heavier homologues exhibit electron sharing through two‐electron, three‐center bonds. Dative bonds X^?→Au⁺←X^? and Ng→Au⁺←Ng are also diagnosed for the lighter gold systems, but the heavier compounds possess electron‐shared bonds.     

An Experimental and Theoretical Study on Influence of H‐bonding on the Synthesized Azo Derivatives Structures

We have reported a simple and efficient reaction for the synthesis of some new functionalized azo structures which were prepared by electron deficient acetylenic compounds in the presence of triphenylphosphine. The characterization of the synthesized azo compounds has been determined by FTIR, UV‐Vis, ¹H NMR, ¹³C NMR and Mass spectroscopic techniques. The influence of H‐bonding on the products has been shown by different experimental analysis. Also, the regioselectivity of the reaction, tautomerization equilibrium and the stability of products was investigated using DFT calculations at the B3LYP/6‐31G level of theory.     

Long,Multicenter Bonding—A New Concept for Supramolecular Materials

A new concept for constructing supramolecular architectures is discussed. In addition to van der Waals and hydrogen‐bonding intermolecular interactions that primarily account for supramolecular structures for all materials lacking extended 3D network structures, directional, long, multicenter bonding that can occur for anionic, cationic, neutral, and zwitterionic radicals and can direct intermolecular recognition through π interactions and form extended network supramolecular structural motifs.     

Theoretical study of Pu and Am tetracarbide molecules

The electronic structure and ground‐state molecular properties of Pu and Am tetracarbides have been investigated by relativistic multireference calculations using CASSCF/CASPT2 theory as well as by density functional theory in conjunction with relativistic pseudopotentials. The CASSCF/CASPT2 treatment has been extended by spin–orbit coupling effects for selected species using the CAS state‐interaction method. The five atoms can form various structural isomers, from which 12 ones have been identified in our study. The electronic ground state in both molecules corresponds to a planar fan‐type structure of C_2v symmetry, in which the actinide atom is connected to a bent C₄ moiety. The other structures are much higher in energy, the ones computed in this study appear between 250 and 1050 kJ/mol. The bonding characteristics in the most relevant structures have been analyzed on the basis of the valence molecular orbitals and natural bond orbital analysis. The most stable structures have been characterized by their spectroscopic (vibrational and electron) properties. © 2014 Wiley Periodicals, Inc.     

A Structural Study of Tautomerism and Hydrogen-Bonding in Supramolecular Assemblies

The synthesis and X-ray structures of four new crystalline materials incorporating ’dimers’ assembled from two different units possessing complementary hydrogen bonding motifs are reported; namely, phthalimide and 3-iminoisoindolinone or 2-guanidinobenzimidazole (or selected methylated derivatives) and 2-guanidinobenzoxazole. The bonding within each dimer involves a triplet of hydrogen bonds. The extended supramolecular structures are compared with each other as well as with two related structures described previously. The effect of using complementary DAD/ADA motifs that are not symmetrical on the respective supramolecular structures is also examined as is the prospect of incorporating different tautomeric components into the supramolecular structures. The presence of a very short, proton-transferred hydrogen bond within the respective triplets is also discussed.     

The Structures and Hydrogen Bonding Networks in Crystals of Alkylenediammonium Salts of Galactaric Acid

The crystal structures of five alkylenediammonium galactarates (1– 5) were determined because the information from these structures may provide some insight into the solid state structures of the poly(alkylene galactaramides) derived from these salts. In each case the meso-galactarate anion is in the extended conformation. In four out of the five cases associations between galactarate units led to alternating layers of anions and cations rather than the expected alternation of anion and cation found in ionic solids. All five salts display extensive hydrogen bonding involving ammonium and carboxylate groups and in some cases hydroxyl groups of the anion.     

Crystal Structure and Conformation of a Bilirubin Ester

Summary. Crystal structures determined for three bilirubin analogs with gem-dimethyl groups at C(10) are reported, including the first X-ray structure of a bilirubin dimethyl ester. Conformation-determining torsion angles and key hydrogen bond distances and angles were compared to those from molecular dynamics calculations. Like other rubins, the component dipyrrinones of the three compounds were found to adopt the syn conformation, with Z-configuration double bonds at C(4) and C(15) and bis-lactam tautomeric structures of the end rings. No large differences in bond lengths and bond angles at C(10) were found, and the crystal structures of the two 10,10-dimethyl rubin acids showed considerable similarity to that of bilirubin: both pigments adopt a folded, intramolecularly hydrogen bonded ridge-tile conformation stabilized by six hydrogen bonds, with an interplanar angle in ridge-tile of 98° and 86°. In contrast, the dimethyl ester is intermolecularly hydrogen bonded in the crystal. Each molecule of the ester has its two syn-Z-dipyrrinones rotated into a conformation syn to the gem-dimethyl group, whereas in the acids they are anti.     

Structures,energetics, and isomerism of [Be,C,O,S]: Stability of triply bonded sulfur

Multiply bonded sulfur has continued to attract attention both experimentally and theoretically. Triply sulfur‐bonded compounds are still rare, due to either the lack of suitable generation precursors or the conversion instability toward doubly sulfur‐bonded structures. A detailed computational study was performed on the structures and stability of various [Be,C,O,S] isomers at the coupled cluster singles doubles (triple excitations) (CCSD(T))/aug‐cc‐pVTZ//B3LYP/6‐311+G(d)+ZPVE level to predict intrinsically stable isomers with triply bonded sulfur. The molecular orbital, bond distance, and harmonic vibrational frequency analysis were carried out at aug‐cc‐pVTZ‐B3LYP, M06‐2X, and CCSD(T) levels to investigate the bonding nature of linear structures. It was shown that two low‐lying isomers are linear SBeCO 01 (0.0 kcal/mol) and SBeOC 02 (15.7 kcal/mol), both of which possess the SBe triple bonding. The Lewis acid–base association of SBe + CO can barrierlessly form 01 and 02, with the former more abundant, while the insertion reaction of SCO + Be might generate more 02 than 01 via photochemical processes. By contrast, formation of the SC‐bearing isomer SCBeO 04 (39.4 kcal/mol) seems unlikely due to its higher energy and less kinetic competition than that of 01 and 02, via either simple association or insertion reactions. The new stable isomers SBeCO 01 and SBeOC 02 add to the number of SBe triply bonded species. Their unique structures and varied branching ratios under association and insertion processes deserve future experimental study. © 2013 Wiley Periodicals, Inc.     

Geometric and electronic similarities between transition structures for electrocyclizations and sigmatropic hydrogen shifts

This paper reports new theoretical evidence that supports previous proposals concerning the similarity between transition structures for electrocyclizations and sigmatropic hydrogen shifts. This evidence was obtained using two recently proposed methodologies, namely the so-called generalized population analysis and the formalism of molecular quantum similarity indices. Analysis of multicenter bond indices shows that the transition structures for cationic [1,n] hydrogen shifts do indeed have three-center indices that are similar to those of other three-center carbocations. In addition, the close resemblance of the electronic structures of electrocyclic and sigmatropic transition structures that differ by only a proton is supported by the values of their quantum molecular similarity indices.     

The Electronic Structures and Chemical Bonding of Some Dinuclear and Trinuclear Low－valence Molybdenum Complexes Containing Thiolate Bridges

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Palladium site ordering and the occurrence of superconductivity in Bi2Pd3Se2−xSx

The crystallographic and electronic structures of compounds related to parkerite (Bi₂Ni₃S₂) are investigated with respect to the recently reported occurrence (Bi₂Pd₃Se₂) and absence (Bi₂Pd₃S₂) of superconductivity. Similarities and differences of the crystal structures are discussed within the series of solid solutions Bi₂Pd₃S_2−xSe_x from powder and single crystal diffraction data. From crystal structure refinements, the question of different structures and settings of parkerite is discussed. Similar and different 2D and 3D partial Pd-Ch (Ch=S, Se) structures are related to half antiperovskite ordering schemes. To investigate the relation of low dimensional structures and the occurrence of superconductivity, electronic structures are analyzed by scalar-relativistic DFT calculations, including site projected DOS, ECOV and Fermi surfaces.