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1.
Ab initio calculations are used to provide information on H3N???XY???HF triads (X, Y=F, Cl, Br) each having a halogen bond and a hydrogen bond. The investigated triads include H3N???Br2‐HF, H3N???Cl2???HF, H3N???BrCI???HF, H3N???BrF???HF, and H3N???ClF???HF. To understand the properties of the systems better, the corresponding dyads are also investigated. Molecular geometries, binding energies, and infrared spectra of monomers, dyads, and triads are studied at the MP2 level of theory with the 6‐311++G(d,p) basis set. Because the primary aim of this study is to examine cooperative effects, particular attention is given to parameters such as cooperative energies, many‐body interaction energies, and cooperativity factors. The cooperative energy ranges from ?1.45 to ?4.64 kcal mol?1, the three‐body interaction energy from ?2.17 to ?6.71 kcal mol?1, and the cooperativity factor from 1.27 to 4.35. These results indicate significant cooperativity between the halogen and hydrogen bonds in these complexes. This cooperativity is much greater than that between hydrogen bonds. The effect of a halogen bond on a hydrogen bond is more pronounced than that of a hydrogen bond on a halogen bond.  相似文献   

2.
3.
MP2/aug′‐cc‐pVTZ calculations were performed to investigate boron as an electron‐pair donor in halogen‐bonded complexes (CO)2(HB):ClX and (N2)2(HB):ClX, for X=F, Cl, OH, NC, CN, CCH, CH3, and H. Equilibrium halogen‐bonded complexes with boron as the electron‐pair donor are found on all of the potential surfaces, except for (CO)2(HB):ClCH3 and (N2)2(HB):ClF. The majority of these complexes are stabilized by traditional halogen bonds, except for (CO)2(HB):ClF, (CO)2(HB):ClCl, (N2)2(HB):ClCl, and (N2)2(HB):ClOH, which are stabilized by chlorine‐shared halogen bonds. These complexes have increased binding energies and shorter B?Cl distances. Charge transfer stabilizes all complexes and occurs from the B lone pair to the σ* Cl?A orbital of ClX, in which A is the atom of X directly bonded to Cl. A second reduced charge‐transfer interaction occurs in (CO)2(HB):ClX complexes from the Cl lone pair to the π* C≡O orbitals. Equation‐of‐motion coupled cluster singles and doubles (EOM‐CCSD) spin–spin coupling constants, 1xJ(B‐Cl), across the halogen bonds are also indicative of the changing nature of this bond. 1xJ(B‐Cl) values for both series of complexes are positive at long distances, increase as the distance decreases, and then decrease as the halogen bonds change from traditional to chlorine‐shared bonds, and begin to approach the values for the covalent bonds in the corresponding ions [(CO)2(HB)?Cl]+ and [(N2)2(HB)?Cl]+. Changes in 11B chemical shieldings upon complexation correlate with changes in the charges on B.  相似文献   

4.
The C?H???Y (Y=hydrogen‐bond acceptor) interactions are somewhat unconventional in the context of hydrogen‐bonding interactions. Typical C?H stretching frequency shifts in the hydrogen‐bond donor C?H group are not only small, that is, of the order of a few tens of cm?1, but also bidirectional, that is, they can be red or blue shifted depending on the hydrogen‐bond acceptor. In this work we examine the C?H???N interaction in complexes of 7‐azaindole with CHCl3 and CHF3 that are prepared in the gas phase through supersonic jet expansion using the fluorescence depletion by infra‐red (FDIR) method. Although the hydrogen‐bond acceptor, 7‐azaindole, has multiple sites of interaction, it is found that the C?H???N hydrogen‐bonding interaction prevails over the others. The electronic excitation spectra suggest that both complexes are more stabilized in the S1 state than in the S0 state. The C?H stretching frequency is found to be red shifted by 82 cm?1 in the CHCl3 complex, which is the largest redshift reported so far in gas‐phase investigations of 1:1 haloform complexes with various substrates. In the CHF3 complex the observed C?H frequency is blue shifted by 4 cm?1. This is at variance with the frequency shifts that are predicted using several computational methods; these predict at best a redshift of 8.5 cm?1. This discrepancy is analogous to that reported for the pyridine‐CHF3 complex [W. A. Herrebout, S. M. Melikova, S. N. Delanoye, K. S. Rutkowski, D. N. Shchepkin, B. J. van der Veken, J. Phys. Chem. A­ 2005 , 109, 3038], in which the blueshift is termed a pseudo blueshift and is shown to be due to the shifting of levels caused by Fermi resonance between the overtones of the C?H bending and stretching modes. The dissociation energies, (D0), of the CHCl3 and CHF3 complexes are computed (MP2/aug‐cc‐pVDZ level) as 6.46 and 5.06 kcal mol?1, respectively.  相似文献   

5.
A study of the strong N?X????O?N+ (X=I, Br) halogen bonding interactions reports 2×27 donor×acceptor complexes of N‐halosaccharins and pyridine N‐oxides (PyNO). DFT calculations were used to investigate the X???O halogen bond (XB) interaction energies in 54 complexes. A simplified computationally fast electrostatic model was developed for predicting the X???O XBs. The XB interaction energies vary from ?47.5 to ?120.3 kJ mol?1; the strongest N?I????O?N+ XBs approaching those of 3‐center‐4‐electron [N?I?N]+ halogen‐bonded systems (ca. 160 kJ mol?1). 1H NMR association constants (KXB) determined in CDCl3 and [D6]acetone vary from 2.0×100 to >108 m ?1 and correlate well with the calculated donor×acceptor complexation enthalpies found between ?38.4 and ?77.5 kJ mol?1. In X‐ray crystal structures, the N‐iodosaccharin‐PyNO complexes manifest short interaction ratios (RXB) between 0.65–0.67 for the N?I????O?N+ halogen bond.  相似文献   

6.
The pairing of ions of opposite charge is a fundamental principle in chemistry, and is widely applied in synthesis and catalysis. In contrast, cation–cation association remains an elusive concept, lacking in supporting experimental evidence. While studying the structure and properties of 4‐oxopiperidinium salts [OC5H8NH2]X for a series of anions X? of decreasing basicity, we observed a gradual self‐association of the cations, concluding in the formation of an isolated dicationic pair. In 4‐oxopiperidinium bis(trifluoromethylsulfonyl)amide, the cations are linked by N? H???O?C hydrogen bonds to form chains, flanked by hydrogen bonds to the anions. In the tetra(perfluoro‐tert‐butoxy)aluminate salt, the anions are fully separated from the cations, and the cations associate pairwise by N? C? H???O?C hydrogen bonds. The compounds represent the first genuine examples of self‐association of simple organic cations based merely on hydrogen bonding as evidenced by X‐ray structure analysis, and provide a paradigm for an extension of this class of compounds.  相似文献   

7.
CF3H as a proton donor was paired with a variety of anions, and its properties were assessed by MP2/aug‐cc‐pVDZ calculations. The binding energy of monoanions halide, NO3?, formate, acetate, HSO4?, and H2PO4? lie in the 12–17 kcal mol?1 range, although F? is more strongly bound, by 26 kcal mol?1. Dianions SO42? and HPO42? are bound by 27 kcal mol?1, and trianion PO43? by 45 kcal mol?1. When two O atoms are available on the anion, the CH???O? H‐bond (HB) is usually bifurcated, although asymmetrically. The CH bond is elongated and its stretching frequency redshifted in these ionic HBs, but the shift is reduced in the bifurcated structures. Slightly more than half of the binding energy is attributed to Coulombic attraction, with smaller contributions from induction and dispersion. The amount of charge transfer from the anions to the σ*(CH) orbital correlates with many of the other indicators of bond strength, such as binding energy, CH bond stretch, CH redshift, downfield NMR spectroscopic chemical shift of the bridging proton, and density at bond critical points.  相似文献   

8.
The role of CH–π and CF–π interactions in determining the structure of N‐heterocyclic carbene (NHC) palladium complexes were studied using 1H NMR spectroscopy, X‐ray crystallography, and DFT calculations. The CH–π interactions led to the formation of the cisanti isomers in 1‐aryl‐3‐isopropylimidazol‐2‐ylidene‐based [(NHC)2PdX2] complexes, while CF–π interactions led to the exclusive formation of the cis‐syn isomer of diiodobis(3‐isopropyl‐1‐pentafluorophenylimidazol‐2‐ylidene) palladium(II).  相似文献   

9.
The cooperativity between the dihydrogen bond and the N???HC hydrogen bond in LiH–(HCN)n (n=2 and 3) complexes is investigated at the MP2 level of theory. The bond lengths, dipole moments, and energies are analyzed. It is demonstrated that synergetic effects are present in the complexes. The cooperativity contribution of the dihydrogen bond is smaller than that of the N???HC hydrogen bond. The three‐body energy in systems involving different types of hydrogen bonds is larger than that in the same hydrogen‐bonded systems. NBO analyses indicate that orbital interaction, charge transfer, and bond polarization are mainly responsible for the cooperativity between the two types of hydrogen bonds.  相似文献   

10.
A series of six‐ and seven‐membered expanded‐ring N‐heterocyclic carbene (er‐NHC) gold(I) complexes has been synthesized using different synthetic approaches. Complexes with weakly coordinating anions [(er‐NHC)AuX] (X?=BF4?, NTf2?, OTf?) were generated in solution. According to their 13C NMR spectra, the ionic character of the complexes increases in the order X?=Cl?<NTf2?<OTf?<BF4?. Additional factors for stabilization of the cationic complexes are expansion of the NHC ring and the attachment of bulky substituents at the nitrogen atoms. These er‐NHCs are bulkier ligands and stronger electron donors than conventional NHCs as well as phosphines and sulfides and provide more stabilization of [(L)Au+] cations. A comparative study has been carried out of the catalytic activities of five‐, six‐, and seven‐membered carbene complexes [(NHC)AuX], [(Ph3P)AuX], [(Me2S)AuX], and inorganic compounds of gold in model reactions of indole and benzofuran synthesis. It was found that increased ionic character of the complexes was correlated with increased catalytic activity in the cyclization reactions. As a result, we developed an unprecedentedly active monoligand cationic [(THD‐Dipp)Au]BF4 (1,3‐bis(2,6‐diisopropylphenyl)‐3,4,5,6‐tetrahydrodiazepin‐2‐ylidene gold(I) tetrafluoroborate) catalyst bearing seven‐membered‐ring carbene and bulky Dipp substituents. Quantitative yields of cyclized products were attained in several minutes at room temperature at 1 mol % catalyst loadings. The experimental observations were rationalized and fully supported by DFT calculations.  相似文献   

11.
Hydrogen bonds (H bonds) play a major role in defining the structure and properties of many substances, as well as phenomena and processes. Traditional H bonds are ubiquitous in nature, yet the demonstration of weak H bonds that occur between a highly polarized C?H group and an electron‐rich oxygen atom, has proven elusive. Detailed here are linear and nonlinear IR spectroscopy experiments that reveal the presence of H bonds between the chloroform C?H group and an amide carbonyl oxygen atom in solution at room temperature. Evidence is provided for an amide solvation shell featuring two clearly distinguishable chloroform arrangements that undergo chemical exchange with a time scale of about 2 ps. Furthermore, the enthalpy of breaking the hydrogen bond is found to be 6–20 kJ mol?1. Ab‐initio computations support the findings of two distinct solvation shells formed by three chloroform molecules, where one thermally undergoes hydrogen‐bond making and breaking.  相似文献   

12.
Although the two polymorphic modifications, (I) and (II), of the title compound, C13H10N2O, crystallize in the same space group (P21/c), their asymmetric units have Z′ values of 1 and 2, respectively. These are conformational polymorphs, since the mol­ecules in phases (I) and (II) adopt different rotations of the phenyl ring with respect the central 2‐cyano­carboxy­amino­prop‐2‐enyl fragment. Calculations of crystal packing using Cerius2 [Molecular Simulations (1999). 9685 Scranton Road, San Diego, CA 92121, USA] have shown that (I) is more stable than (II), by 1.3 kcal mol?1 for the crystallographically determined structures and by 1.56 kcal mol?1 for the optimized structures (1 kcal mol?1 = 4.184 kJ mol?1). This difference is mainly attributed to the different strengths of the hydrogen bonding in the two forms.  相似文献   

13.
[ReNCl2(PPh3)2] and [ReNCl2(PMe2Ph)3] react with the N‐heterocyclic carbene (NHC) 1,3,4‐triphenyl‐1,2,4‐triazol‐5‐ylidene (HLPh) under formation of the stable rhenium(V) nitrido complex [ReNCl(HLPh)(LPh)], which contains one of the two NHC ligands with an additional orthometallation. The rhenium atom in the product is five‐coordinate with a distorted square‐pyramidal coordination sphere. The position trans to the nitrido ligand is blocked by one phenyl ring of the monodentate HLPh ligand. The Re–C(carbene) bond lengths of 2.072(6) and 2.074(6) Å are comparably long and indicate mainly σ‐bonding between the NHC ligand and the electron deficient d2 metal atom. The chloro ligand in [ReNCl(HLPh)(LPh)] is labile and can be replaced by ligands such as pseudohalides or monoanionic thiolates such as diphenyldithiophosphinate (Ph2PS2?) or pyridine‐2‐thiolate (pyS?). X‐ray structure analyses of [ReN(CN)(HLPh)(LPh)] and [ReN(pyS)(HLPh)(LPh)] show that the bonding situation of the NHC ligands (Re–C(carbene) distances between 2.086(3) and 2.130(3) Å) in the product is not significantly influenced by the ligand exchange. The potentially bidentate pyS? ligand is solely coordinated via its thiolato functionality. Hydrogen atoms of each one of the phenyl rings come close to the unoccupied sixth coordination positions of the rhenium atoms in the solid state structures of all complexes. Re–H distances between 2.620 and 2.712Å do not allow to discuss bonding, but with respect to the strong trans labilising influence of “N3?”, weak interactions are indicated.  相似文献   

14.
The gas‐phase bond‐dissociation energies of a SO2–imidazolylidene leaving group of three gold(I) benzyl imidazolium sulfone complexes are reported (E0=46.6±1.7, 49.6±1.7, and 48.9±2.1 kcal mol?1). Although these energies are similar to each other, they are reproducibly distinguishable. The energy‐resolved collision‐induced dissociation experiments of the three [L]–gold(I) (L=ligand) carbene precursor complexes were performed by using a modified tandem mass spectrometer. The measurements quantitatively describe the structural and electronic effects a p‐methoxy substituent on the benzyl fragment, and trans [NHC] and [P] gold ligands, have towards gold carbene formation. Evidence for the formation of the electrophilic gold carbene in solution was obtained through the stoichiometric and catalytic cyclopropanation of olefins under thermal conditions. The observed cyclopropane yields are dependent on the rate of gold carbene formation, which in turn is influenced by the ligand and substituent. The donation of electron density to the carbene carbon by the p‐methoxy benzyl substituent and [NHC] ligand stabilizes the gold carbene intermediate and lowers the dissociation barrier. Through the careful comparison of gas‐phase and solution chemistry, the results suggest that even gas‐phase leaving‐group bond‐dissociation energy differences of 2–3 kcal mol?1 enormously affect the rate of gold carbene formation in solution, especially when there are competing reactions. The thermal decay of the gold carbene precursor complex was observed to follow first‐order kinetics, whereas cyclopropanation was found to follow pseudo‐first‐order kinetics. Density‐functional‐theory calculations at the M06‐L and BP86‐D3 levels of theory were used to confirm the observed gas‐phase reactivity and model the measured bond‐dissociation energies.  相似文献   

15.
Reactions of the oxorhenium(V) complexes [ReOX3(PPh3)2] (X = Cl, Br) with the N‐heterocyclic carbene (NHC) 1,3,4‐triphenyl‐1,2,4‐triazol‐5‐ylidene (LPh) under mild conditions and in the presence of MeOH or water give [ReOX2(Y)(PPh3)(LPh)] complexes (X = Cl, Br; Y = OMe, OH). Attempted reactions of the carbene precursor 5‐methoxy‐1,3,4‐triphenyl‐4,5‐dihydro‐1H‐1,2,4‐triazole ( 1 ) with [ReOCl3(PPh3)2] or [NBu4][ReOCl4] in boiling xylene resulted in protonation of the intermediately formed carbene and decomposition products such as [HLPh][ReOCl4(OPPh3)], [HLPh][ReOCl4(OH2)] or [HLPh][ReO4] were isolated. The neutral [ReOX2(Y)(PPh3)(HLPh)] complexes are purple, airstable solids. The bulky NHC ligands coordinate monodentate and in cis‐position to PPh3. The relatively long Re–C bond lengths of approximate 2.1Å indicate metal‐carbon single bonds.  相似文献   

16.
The structures associated with halide (F?, Cl?, Br?) complexation inside CH hydrogen‐bonding macrocyclic receptors, called triazolophanes, are characterized using density functional theory (DFT). The associated binding energies in the gas and solution phases are evaluated. The ruffles in the empty triazolophane become smoothed‐out upon Cl?‐ and Br?‐ion binding directly into the middle of the cavity. The largely pre‐organized cavity morphs into an elliptical shape to facilitate shorter hydrogen bonds in the north and south regions and longer ones west and east. The smaller F? ion sits in, and flattens‐out, only the north (or south) region. The 1,2,3‐triazoles show shorter CH???Cl? contacts than for the phenylenes. Both Cl? and Br? show the same binding geometries but Cl? has a larger binding energy consistent with its stronger Lewis basicity. Model triads were used to decompose the overall binding energy into those of its components. In the course of this triad analysis, anion polarization was identified and its contribution to the triad???Cl? binding energy estimated. Consequently, the binding energies for the individual aryl units within the comparatively non‐polarized triazolophanes were estimated. The 1,2,3‐triazoles are twice as strong as the phenylenes thus contributing most of the interaction energy to Cl?‐ion binding. Therefore, the 1,2,3‐triazoles appear to approach the hydrogen bond strengths of the NH donors of pyrrole units.  相似文献   

17.
Carbon‐donated hydrogen bonds (CDHBs) are weak forms of hydrogen bonding (0.5–1.0 kcal mol?1) that are difficult to detect, and thus their roles in the structure and functionality of chemical systems often go unrecognized. Utilizing a computational approach, the existence of a structurally significant CDHB in the medically relevant protein Streptococcus pneumoniae hyaluronate lyase (SpnHL) is affirmed. The structure of a tetrapeptide fragment model containing the CDHB was optimized with second‐order perturbation theory. From this, a CDHB with bond distance and angle consistent with previously discovered CDHBs and comparable to neighboring traditional HBs in the fragment model was found. The CDHB competes with another donor T253 OH, whereby the two alternate in strength between protein conformations, imbuing αHelix 3 appreciable flexibility. The CDHB seems to exist in spite of torsional and steric strain on the donor methyl group. It is postulated that the CDHB could aid in either counteracting the macrodipole of αHelix 3 or protecting the A249 CO from destabilizing interactions with the adjacent solvent. Employing the energy gradients from the optimization, the torque generated by the fragment model was computed, which accurately predicts the direction of rotation of αHelix 3 observed from experiment. A strongly correlated motion between αHelix 3 and αHelices 2, 4, and 5 was noted, which the interactions of the fragment model help drive by generating a torque much larger than necessary to rotate just αHelix 3. Considering these results, we conclude that CDHBs should be considered as possible beneficial components of chemical and biological phenomena.  相似文献   

18.
Bis(NHC)ruthenium(II)–porphyrin complexes were designed, synthesized, and characterized. Owing to the strong donor strength of axial NHC ligands in stabilizing the trans M?CRR′/M?NR moiety, these complexes showed unprecedently high catalytic activity towards alkene cyclopropanation, carbene C? H, N? H, S? H, and O? H insertion, alkene aziridination, and nitrene C? H insertion with turnover frequencies up to 1950 min?1. The use of chiral [Ru(D4‐Por)(BIMe)2] ( 1 g ) as a catalyst led to highly enantioselective carbene/nitrene transfer and insertion reactions with up to 98 % ee. Carbene modification of the N terminus of peptides at 37 °C was possible. DFT calculations revealed that the trans axial NHC ligand facilitates the decomposition of diazo compounds by stabilizing the metal–carbene reaction intermediate.  相似文献   

19.
Homobimetallic metallophilic interactions between copper, silver, and gold‐based [(NHC)MX]‐type complexes (NHC=N‐heterocyclic carbene, i.e, 1,3,4‐trimethyl‐4,5‐dihydro‐1H‐1,2,4‐triazol‐5‐ylidene; X=F, Cl, Br, I) were investigated by means of ab initio interaction energies, Ziegler–Rauk‐type energy‐decomposition analysis, the natural orbital for chemical valence (NOCV) framework, and the noncovalent interaction (NCI) index. It was found that the dimers of these complexes predominantly adopt a head‐to‐tail arrangement with typical M ??? M distance of 3.04–3.64 Å, in good agreement with the experimental X‐ray structure determined for [{(NHC)AuCl}2], which has an Au ??? Au distance of 3.33 Å. The interaction energies between silver‐ and gold‐based monomers are calculated to be about ?25 kcal mol?1, whereas that for the Cu congener is significantly lower (?19.7 kcal mol?1). With the inclusion of thermal and solvent contributions, both of which are destabilizing, by about 15 and 8 kcal mol?1, respectively, an equilibrium process is predicted for the formation of dimer complexes. Energy‐decomposition analysis revealed a dominant electrostatic contribution to the interaction energy, besides significantly stabilizing dispersion and orbital interactions. This electrostatic contribution is rationalized by NHC(δ+) ??? halogen(δ?) interactions between monomers, as demonstrated by electrostatic potentials and derived charges. The dominant NOCV orbital indicates weakening of the π backdonation in the monomers on dimer formation, whereas the second most dominant NOCV represents an electron‐density deformation according to the formation of a very weak M ??? M bond. One of the characteristic signals found in the reduced density gradient versus electron density diagram corresponds to the noncovalent interactions between the metal centers of the monomers in the NCI plots, which is the manifestation of metallophilic interaction.  相似文献   

20.
A family of seven cationic gold complexes that contain both an alkyl substituted π‐allene ligand and an electron‐rich, sterically hindered supporting ligand was isolated in >90 % yield and characterized by spectroscopy and, in three cases, by X‐ray crystallography. Solution‐phase and solid‐state analysis of these complexes established preferential binding of gold to the less substituted C?C bond of the allene and to the allene π face trans to the substituent on the uncomplexed allenyl C?C bond. Kinetic analysis of intermolecular allene exchange established two‐term rate laws of the form rate=k1[complex]+k2[complex][allene] consistent with allene‐independent and allene‐dependent exchange pathways with energy barriers of ΔG1=17.4–18.8 and ΔG2=15.2–17.6 kcal mol?1, respectively. Variable temperature (VT) NMR analysis revealed fluxional behavior consistent with facile (ΔG=8.9–11.4 kcal mol?1) intramolecular exchange of the allene π faces through η1‐allene transition states and/or intermediates that retain a staggered arrangement of the allene substituents. VT NMR/spin saturation transfer analysis of [{P(tBu)2o‐binaphthyl}Au(η2‐4,5‐nonadiene) ]+SbF6? ( 5 ), which contains elements of chirality in both the phosphine and allene ligands, revealed no epimerization of the allene ligand below the threshold for intermolecular allene exchange (ΔG298K=17.4 kcal mol?1), which ruled out the participation of a η1‐allylic cation species in the low‐energy π‐face exchange process for this complex.  相似文献   

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