Synthesis of [2]- and [3]rotaxanes through Sonogashira coupling

The synthesis of new [2]- and [3]rotaxanes through Sonogashira coupling has been accomplished in the aim to built oligo(phenyleneethynylene) (OPE) encircled by crown ethers. Optimization of the Sonogashira coupling for the formation of the [2]rotaxane (capping reaction) is presented and the best method has been applied for the synthesis of the longer [3]rotaxane.     

Pillar[5]arene-based [3]rotaxanes: Convenient construction via multicomponent reaction and pH responsive self-assembly in water

Four pillar[5]arene based [3]rotaxanes(1-4) involving two 1,4-diethoxypillar[5]arene(DEP5) rings and a dumbbell-shaped component were successfully synthesized.The dumbbell-shape molecules contain one longer bridge,two triazole sites and two multicomponent stoppers.After threading DEP5 rings with linear guests(G1-G4) which contain two benzaldehyde units,the base catalyzed three-component reaction of dimedone,malononitrile and benzaldehyde was performed to construct the stoppers and connected the pseudorotaxanes with stoppers to generate 1-4.The structures of [3]rotaxanes and their self-assembly behaviors were characterized by ~1 H NMR,~(13)C NMR,NOESY,HR-ESI-MS,DLS and TEM technologies.We hope that pillar[5]arene based [3]rotaxanes may have potential applications in drug delivery systems and molecular devices.     

The synthesis of [2], [3] and [4]rotaxanes and semirotaxanes

The cucurbituril-catalysed synthesis of [2], [3] and [4]semirotaxanes allows access to regioselectively pure, 1,3-disubstituted mono-, bis- and tris-triazoles in high yield after dethreading.     

Face-selective [2]- and [3]rotaxanes: kinetic control of the threading direction of cyclodextrins

New [2]- and [3]pseudorotaxanes containing alpha-cyclodextrin (alpha-CDs) molecules as rotors and alkyl pyridinium derivatives as axles were prepared by a slipping process. The inclusion behavior of these rotaxanes was investigated by using one- and two-dimensional NMR spectroscopy. The methyl group at the 2-position of the pyridinium moiety at the end of each axle molecule was found to control the rates of threading of the alpha-CD onto the axle molecules. alpha-CD can approach axle molecules from a particular direction to form inclusion complexes. Axle molecules that contain a 2-methylpyridinium moiety at one end and a bulky stopper at the other end can regulate the direction of approach to give a [2]pseudorotaxane such as 2 b-alpha-CD. A [3]pseudorotaxane in which two alpha-CD molecules are arranged facing in the same direction at two stations of the tetracationic axle molecule was also obtained. These face-selective behaviors are dominated by kinetic processes rather than thermodynamic processes.     

Foldamers in pseudo[2]rotaxanes and [2]rotaxanes: tuning the switching kinetics and metastability

Hydrogen bonded arylamide foldamers have been introduced in switchable pseudo[2]rotaxanes and [2]rotaxanes, which also include a cyclobisparaquat(p-phenylene) (CBPQT⁴⁺) ring and a ‘dumbbell’ containing tetrathiafulvalene (TTF) and 1,5-dioxynaphthalene (DNP, for rotaxanes). The foldamer size changes through folding and unfolding serve as a steric handle to modulate the mechanical movement of the CBPQT⁴⁺ ring along the dumbbell of the pseudo[2]rotaxanes and [2]rotaxanes. By varying the number of the repeating units in the foldamer, the kinetics of the solvent-dependent slippage/deslippage of pseudo[2]rotaxanes and the switching of the ring between TTF and DNP of the [2]rotoxanes can be tuned remarkably, with the time scope ranging from several minutes to several days, in twelve solvents of varying polarity, which have been confirmed by the ¹H NMR, UV–vis spectroscopy, and cyclic voltammogram experiments.     

End-capping of a pseudorotaxane via Diels-Alder reaction for the construction of C60-terminated [2]rotaxanes

[reaction: see text] The Diels-Alder reaction of various dienophiles such as C(60) with a pseudorotaxane having a sultine moiety afforded corresponding [2]rotaxanes in moderate yields. The introduction of a porphyrin moiety on the wheel component considerably enhanced the efficiency of the end-capping reaction with C(60).     

Efficient synthesis of [2]- and higher order rotaxanes via the transition metal-catalyzed hydrosilylation of alkyne

A novel end-capping method of pseudorotaxanes via the hydrosilylation of the alkyne of the axle terminal was developed. RuHCl(CO)(PPh₃)₃ and RhCl(CO)(PPh₃)₃ complexes catalyzed the hydrosilylation reactions of the alkyne moiety of several pseudorotaxanes at ambient temperature to give the corresponding [2]- and higher order rotaxanes in high yields with excellent regio- and stereoselectivity.     

Metal-driven ligand assembly in the synthesis of cyclodextrin [2] and [3]rotaxanes

Cyclodextrin [2] and [3]rotaxanes have been synthesised by use of a metal-driven ligand formation methodology. The kinetically stable cobalt(III) complexes formed act as either linking or capping groups, the function being selected by manipulation of the reaction conditions to promote the formation of either 2:1 or 1:1 complexes, respectively. In all cases, mixtures of isomers containing different alpha-cyclodextrin orientations were observed. All three orientational isomers of the [3]rotaxane were isolated and structurally characterized by 2D NMR.     

Diastereoselective synthesis of [1]rotaxanes via an active metal template strategy

Despite the impressive number of interlocked molecules described in the literature over the past 30 years, only a few stereoselective syntheses of mechanically chiral rotaxanes have been reported so far. In this study, we present the first diastereoselective synthesis of mechanically planar chiral [1]rotaxanes, that has been achieved using the active template Cu-mediated alkyne–azide cycloaddition reaction. This synthetic method has been applied to the preparation of a [1]rotaxane bearing a labile stopper that can then be substituted without disruption of the mechanical bond. This approach paves the way for the synthesis of a wide variety of mechanically planar chiral [1]rotaxanes, hence allowing the study of the properties and potential applications of this class of interlocked molecular architectures.

The first diastereoselective synthesis of mechanically planar chiral [1]rotaxanes has been achieved using the active template Cu-mediated alkyne–azide cycloaddition reaction.     

Self-assembly and dynamics of [2]- and [3]rotaxanes with a dinuclear macrocycle containing reversible Os-N coordinate bonds

With a dinuclear macrocycle 2 that contains weak reversible OsVI-N coordinate bonds, self-assembly and equilibrium dynamics of [2]- and [3]rotaxanes have been investigated. When the macrocycle 2 was mixed together with threads 4a-e, which all contain an adipamide station but different sizes of end groups, [2]pseudorotaxane- and rotaxane-like complexes were immediately formed with large association constants of >7 x 103M(-1) in CDCl3 at 298 K. Exchange dynamics, explored by 2D-EXSY experiments, suggest that assembly and disassembly of complexes occur through two distinct pathways, slipping or clipping, and this depends on the size of the end groups. The slipping pathway is predominant with smaller end groups that give pseudorotaxane-like complexes, while the clipping pathway is observed with larger end groups that yield rotaxane-like complexes. Under the same conditions, exchange barriers (deltaG++) were 14.3 kcalmol(-1) for 4a and 16.7 kcalmol(-1) for 4d, and indicate that the slipping process is at least one order of magnitude faster than the clipping process. Using threads 13a and 13b that contain two adipamide groups, more complicated systems have been investigated in which [2]rotaxane, [3]rotaxane, and free components are in equilibrium. Concentration- and temperature-dependent 1H NMR spectroscopic studies allowed the identification of all possible elements and the determination of their relative distributions in solution. For example, the relative distribution of the free components, [2]rotaxane, and [3]rotaxane are 30, 45, and 25 %, respectively, in a mixture of 2 (2mM) and 13a (2mM) in CDCl3 at 10 degrees C. However, [3]rotaxane exists nearly quantitatively in a mixture of 2 (4 mM) and 13 a (2 mM) in CDCl3 at a low temperature - 10 degrees C.     

In the twilight zone between [2]pseudorotaxanes and [2]rotaxanes

A [2]pseudorotaxane, based on a semi-dumbbell-shaped component containing asymmetrically substituted monopyrrolotetrathiafulvalene and 1,5-dioxynaphthalene recognition sites for encirclement by cyclobis(paraquat-p-phenylene) and with a "speed bump" in the form of a thiomethyl group situated between the two recognition sites, has been self-assembled. This supramolecular entity is a mixture in solution of two slowly interconverting [2]pseudorotaxanes, one of which is on the verge of being a [2]rotaxane at room temperature, allowing it to be isolated by employing flash column chromatography. These two [2]pseudorotaxanes were both characterized in solution by UV/Vis and (1)H NMR spectroscopies (1D and 2D) and also by differential pulse voltammetry. The spectroscopic and electrochemical data reveal that one of the complexes behaves wholly as a [2]pseudorotaxane, while the other has some [2]rotaxane character to it. The kinetics of the shuttling of cyclobis(paraquat-p-phenylene) between the monopyrrolotetrathiafulvalene and the 1,5-dioxynaphthalene recognition sites have been investigated at different temperatures. The shuttling processes, which are accompanied by detectable color changes, can be monitored using UV/Vis and (1)H NMR spectroscopies; the spectroscopic data have been employed in the determination of the rate constants, free energies of activation, enthalpies of activation, and the entropies of activation for the translation of cyclobis(paraquat-p-phenylene) between the two recognition sites.     

High-yield diastereoselective synthesis of planar chiral [2]- and [3]rotaxanes constructed from per-ethylated pillar[5]arene and pyridinium derivatives

Planar chiral [2]- and [3]rotaxanes constructed from pillar[5]arenes as wheels and pyridinium derivatives as axles were obtained in high yield using click reactions. The process of rotaxane formation was diastereoselective; the obtained [2]rotaxane was a racemic mixture consisting of (pS, pS, pS, pS, pS) and (pR, pR, pR, pR, pR) forms of the per-ethylated pillar[5]arene (C2) wheel, and other possible types of the [2]rotaxane did not form. Isolation of the enantiopure [2]rotaxanes with one axle through (pS, pS, pS, pS, pS)-C2 or (pR, pR, pR, pR, pR)-C2 wheels was accomplished. Furthermore, pillar[5]arene-based [3]rotaxane was successfully synthesized by attachment of two pseudo [2]rotaxanes onto a bifunctional linker. [3]Rotaxane formed in a 1:2:1 mixture with one axle threaded through two (pS, pS, pS, pS, pS)-C2, one (pS, pS, pS, pS, pS)-C2 and one (pR, pR, pR, pR, pR)-C2 (meso form), or two (pR, pR, pR, pR, pR)-C2 wheels. The [3]rotaxane enantiomers and the meso form were successfully isolated using appropriate chiral HPLC column chromatography. The procedure developed in this study is the starting point for the creation of pillar[5]arene-based interlocked molecules.     

Self-assembly of novel [3]- and [2]rotaxanes based on donor-acceptor and hydrogen-bonding interactions. Intensified inter-ring repulsion interaction and shuttling behavior

Three novel hetero[3]rotaxanes, which comprise one neutral tetraamide cyclophane, one tetracationic cyclophane, and one linear component, have been assembled by utilizing hydrogen-bonding and donor-acceptor interactions, through three neutral [2]rotaxanes as intermediates. Three tetracationic [2]rotaxanes are also prepared for property comparison. For all three linear components, diamide subunits, the hydrogen-bonding templating moieties, are introduced at the center of the molecules, while the electron-rich hydrogquinone subunits, the donor-acceptor interaction templates, are incorporated between the diamides and the triphenylmethyl stoppers. Compared with the reported [3]rotaxanes, the novel hetero[3]rotaxanes exhibit remarkably intensified spatial interaction between the two ring components, which had been proved by (1)H NMR and UV study. For the first time, inter-ring NOEs are observed for interlocked [3]rotaxanes.     

Quantitative conformational study of redox-active [2]rotaxanes, part 2: Switching in flexible and rigid bistable [2]rotaxanes

Translational movement of the macrocycle in two structurally similar bistable [2]rotaxanes, which is induced by a four-step electrochemical process in solution, has been investigated by using a methodology developed in the preceding article (Chem. Eur. J. 2008, 14, 1107-1116). Both [2]rotaxanes contain a crown ether that can be accommodated by either of two interconnected viologen recognition sites. These sites are substantially different in terms of their affinity towards the crown ether and they possess considerably different electrochemical reduction potentials. The two [2]rotaxanes differ in the length and the rigidity of a bridge that links these sites. A combination of molecular mechanics modelling and NOE spectroscopy data provides information about the conformations of both [2]rotaxanes in the parent oxidation state when the crown ether exclusively populates the strong recognition site. To determine the population of the recognition sites at subsequent stages of reduction, a paramagnetic NMR technique and cyclic voltammetry were used. The key finding is that the flexibility of the connecting bridge element between the recognition sites interferes with shuttling of the crown ether in [2]rotaxanes. It can be demonstrated that the more flexible trimethylene bridge is folded, thus limiting the propensity of the crown ether to shuttle. Consequently, the crown ether populates the original site even in the second reduced state of the flexible [2]rotaxane. On the contrary, in the [2]rotaxane in which two viologen sites are connected by a larger and more rigid p-terphenylene bridge, the predominant location of the crown ether at the weak recognition site is achieved after just one single electron reduction.     

Synthesis and characterization of bis-[1]rotaxanes via salen-bridged bis-pillar[5]arenes

The series of salen-bridged bis-pillar[1]arenes were conveniently prepared by condensation reaction of5,5'-methylenebis(2-hydroxybenzalde hyde)or 5,5'-(propane-2,2-diyl)bis(2-hydroxybenzaldehyde)with mono-amido-functionalized pillar[5]arenes containing different terminal aminoalkyl groups in refluxing ethanol.The^1H NMR and 2D-NOESY spectra indicated that the salen-bridged bis-pillar[5]arenes with longer allcylene linker(n=3,4,6)formed the fascinating bis-[1]rotaxanes,while the salenbridged bis-pillar[5]arenes with short hydrazine and ethylenediamino linker(n=0,2)predominately existed in free form.The single crystal structure of the bis-pillar[5]are ne ambiguously indicated that two propylenediamino linker inserted in to two cavities of pillar[5]arene to form a novel bis-[1]rotaxanes.     

Preparation of biohybrid amphiphiles via the copper catalysed Huisgen [3 + 2] dipolar cycloaddition reaction

Biohybrid amphiphiles have been prepared from terminal azide functionalised polystyrene and an alkyne functionalised peptide or protein via a Cu(I) catalysed Huisgen [3 + 2] dipolar cycloaddition reaction.     

Preparation and electrochemical properties of SAM of alkanethiols functionalized with 2-aza[3]ferrocenophane on gold electrode

Thiols functionalized with N-aryl[3]azaferrocenophane formulated as HS-(CH₂)_n-N(CH₂Cp)₂Fe (1: n = 6, 2: n = 8, 3: n = 10, 4: n = 12) and disulfide obtained by oxidation of 4 (5) were synthesized via three or four steps reactions starting from 1,1′-ferrocenedimethanol, 4-aminophenol, and α,ω-aklanedithiol. Self-assembled monolayers (SAMs) of these thiols and disulfide on gold electrode were prepared by immersing the electrode in MeCN solutions of the compounds. Cyclic voltammograms of the SAM of 1 (n = 6) exhibited reversible redox of the Fe center at E_1/2 = 0.26 V (vs. Ag⁺/Ag) in the presence of Et₄NBF₄ in MeCN and at E_1/2 = 0.40 V (vs. AgCl/Ag) in the presence of NaClO₄ in H₂O. Addition of HClO₄ to the solutions shifted the redox peaks to higher potentials, E_1/2 = 0.51 V (vs. Ag⁺/Ag) in MeCN and E_1/2 = 0.48 V (vs. AgCl/Ag) in H₂O, respectively, which was ascribed to positive charge of tertiary ammonium group formed by protonation of the amino group of the azaferrocenophane. E_1/2 of SAM of 1 in H₂O solution varies depending on the anion contained in the electrolyte, NaClO₄ (0.40 V), NaBF₄ (0.46 V), Na₂SO₄ (0.53 V), and NaCl (0.55 V). Kinetic data of electron transfer between the Fe center and the gold surface of the SAM of 2-4 were obtained with variable scanning rate. Laviron’s analysis provided tunneling constant β, 0.05 Å⁻¹, suggesting that the structural changes in the SAMs on oxidation/reduction undergoes the insignificant change of the kinetic constants of the electron transfer depending on the range of the spacer length. In the acidic aqueous media, the kinetic parameters indicated that the imbalanced electron transfer between oxidized and reduced states of the Fe center was caused by the protonation of bridged amine group of azaferrocenophane.     

pH-Triggered dethreading-rethreading and switching of cucurbit[6]uril on bistable [3]pseudorotaxanes and [3]rotaxanes

A series of water-soluble [3]rotaxanes-(n+2) and [3]pseudorotaxanes-(n+2) with short (propyl, n=1) and long (dodecyl, n=10) aliphatic spacers have been prepared in high yields by a 1,3-dipolar cycloaddition reaction catalyzed by cucurbit[6]uril (CB6). The pH-triggered dethreading and rethreading of CB6 on these pseudorotaxanes was monitored by 1H NMR spectroscopy. A previously reported [3]rotaxane-12 that is known to behave as a bistable molecular switch has two recognition sites for CB6, that is, the diaminotriazole moieties and the dodecyl spacer. By changing the pH of the system, it is possible to observe more than one state in the shuttling process. At low pH values both CB6 units are located on the diaminotriazole moieties owing to an ion-dipole interaction, whereas at high pH values both of the CB6 units are located on the hydrophobic dodecyl spacer. Surprisingly, the CB6 units shuttle back to their initial state very slowly after reprotonation of the axle. Even after eighteen days at room temperature, only about 50 % of the CB6 units had relocated back onto the diaminotriazole moieties. The rate constants for the shuttling processes were measured as a function of temperature over the range from 313 to 333 K and the activation parameters (enthalpy, entropy, and free energy) were calculated by using the Eyring equation. The results indicate that this [3]rotaxane behaves as a kinetically controlled molecular switch. The switching properties of [3]rotaxane-3 have also been studied. However, even under extreme pH conditions this rotaxane has not shown any switching action, which confirms that the propyl spacer is too short to accommodate CB6 units.