Cyclization versus oligomerization of SP- and RP-5′-OH-N-benzoyl-2′-deoxycytidine-3′-O-(2-thio-4,4-pentamethylene-1,3,2-oxathiaphospholane)s

The S_P-isomer of 5′-OH-N⁴-benzoyl-2′-deoxycytidine-3′-O-(2-thio-4,4-pentamethylene-1,3,2-oxathiaphospholane) undergoes DBU-promoted intramolecular cyclization providing as a sole product S_P-deoxycytidine cyclic 3′,5′-O,O-phosphorothioate. Unexpectedly, the R_P-counterpart yields a mixture of products consisting of R_P-deoxycytidine cyclic 3′,5′-O,O-phosphorothioate and macrocyclic oligo(deoxycytidine phosphorothioate)s. The results of molecular modeling indicate that the dychotomy observed for the R_P substrate may result from remarkably higher energy of the corresponding transition states, caused by the presence of bulky ‘spiro’ pentamethylene substituent at the position C4 in the oxathiaphospholane ring.     

A new reaction of P4S10 and Lawesson's reagent; a new method for the synthesis of dithieno[3,2-b;2,3-d]thiophenes

A new reaction of P₄S₁₀ and Lawesson's reagent for the synthesis of fused thiophenes has been uncovered. It has given easy access to the synthesis of derivatives of the technologically important heterocycle dithieno[3,2-b;2^′,3^′-d]thiophene, DTT. Electrochemical polymerization of one of the derivatives has been demonstrated.     

C2 Symmetric chiral N-heterocyclic carbene catalyst for asymmetric intramolecular Stetter reaction

The asymmetric intramolecular Stetter reaction of ω-formyl α,β-unsaturated carbonyl compounds was catalyzed by a C2 symmetric chiral carbene, generated from (4S,5S)-diphenyl-1,3-bis(mesitylmethyl)-4,5-dihydro-1H-imidazolium tetrafluoroborate, to afford 2-substituted cyclopentanones in good enantioselectivity of up to 80%.     

New iminophosphorane-mediated synthesis of thieno[3′,2′:4,5]thieno[3,2-d]pyrimidin-4(3H)-ones and 5H-2,3-dithia-5,7-diaza-cyclopenta[c,d]indenes

Mono(iminophosphorane) 4 was selectively prepared from the reaction of 3,4-diaminothieno[2,3-b]thiophene 3 with excess triphenylphosphine, C₂Cl₆, and Et₃N due to intramolecular double hydrogen bond formation. Mono(iminophosphorane) 4 reacted with aromatic isocyanates to give stable carbodiimides 8, which were further treated with aliphatic secondary or primary amines to give 2-amino substituted thieno[3′,2′:4,5]thieno[3,2-d]pyrimidin-4(3H)-ones 10 or 12 in the presence of a catalytic amounts of EtO⁻Na⁺. However, in the presence of a catalytic amounts of potassium carbonate, the carbodiimides 8 were transformed into previously unreported 5H-2,3-dithia-5,7-diaza-cyclopenta[c,d]indenes 13 via direct cyclization in high yields. The reaction of carbodiimides 8 with phenols in the presence of a catalytic amounts of potassium carbonate gave a mixture of 2-aryloxy substituted thieno[3′,2′:4,5]thieno[3,2-d]pyrimidin-4(3H)-ones 14 and 13. X-ray structure analysis of 10m supported the structure and the proposed reactivity of amino group.     

Practical synthesis of adenosine 3′,5′-cyclic monophosphorodithioate

Adenosine 3′,5′-cyclic monophosphorodithioate (cAMPS₂), which has two exocyclic sulfurs directly attached to phosphorus, was synthesized from adenosine phosphoramidite by intramolecular cyclization employing the phosphotriester method as a key step.     

Reaction of 5-oxo-2-phenyl-4,4-bis(trifluoromethyl)-4,5-dihydro-1,3,2-benzodioxaphosphepine with chloral. The synthesis and spatial structure of 5-carbaphosphatrane containing a four-membered ring

Phosphorylation of 2-hydroxyphenyl 2,2,2-trifluoro-1-hydroxy-1-(trifluoromethyl)ethyl ketone with dichloro(phenyl)phosphine gave 5-oxo-2-phenyl-4,4-bis(trifluoromethyl)-4,5-di-hydro-1,3,2-benzodioxaphosphepine. Heating of the latter initiated an intramolecular interaction of the P atom with the carbonyl group. Hydrolysis of the intermediate product yielded 3-hydroxy-2-oxo-2-phenyl-3-[2,2,2-trifluoro-1-hydroxy-1-(trifluoromethyl)ethyl]-2,3-di-hydro-1,2λ⁵-benzo[d]oxaphosphole. The reaction was highly stereoselective (P_RC_S/P_SC_R). The reaction of the starting phosphepine with chloral proceeded highly stereoselectively (P_RC_SC_S/P_SC_RC_R) to give a 5-carbaphosphatrane derivative containing a four-membered ring, namely, 1-phenyl-3-trichloromethyl-10,10-bis(trifluoromethyl)-6,7-benzo-2,4,8,9-tetraoxa-1λ⁵-phosphatricyclo[3.3.2.0¹,⁵]decene. The trigonal bipyramid of the 5-carbaphosphatrane derivative is made up of the equatorial O atoms and the apical C atoms.     

The reductive dimerization of some 1,3-dienes and of 1,3,5-cycloheptatriene in the presence of trimethylchlorosilane: a DFT investigation

Treatment of 1,3-dienes and 1,3,5-cycloheptatriene by chlorotrimethylsilane in the presence of wire of lithium led mainly to reductive dimerization with formation of bis(allylsilane) derivatives. Bis-silyl compounds obtained: from 1,3-butadiene, 1,8-bis(trimethylsilyl)-2,6-octadiene (70%); from isoprene, (Z,Z)-2,7-dimethyl-1,8-bis(trimethylsilyl)-2,6-octadiene (44%) and 2,6-dimethyl-1,8-bis(trimethylsilyl)-2,6-octadiene (19%); from butadiene-isoprene mixture (1:1), 3-methyl-1,8-bis(trimethylsilyl)-2,6-octadiene (55%); from 2,3-dimethylbutadiene, (E,E)-2,3,6,7-tetramethyl-1,8-bis(trimethylsilyl)-2,6-octadiene (36%), from 1,3-cyclohexadiene, 4,4′-bis(trimethylsilyl)-bicyclohexyl-2,2′-diene (48%); from 1,3,5-cycloheptatriene, 1,1′-bi[(S^∗,S^∗)-6-(trimethylsilyl)cyclohepta-2,4-dien-1-yl] (53%). The structure of the various intermediates (radical anion, dianion, silylated radical, silylated anion) has been established by calculations at the B3LYP/6-311++G(d,p) level of theory with zero-point energy correction. These results are in accordance with a pathway including the formation of a radical anion, its silylation furnishing to a γ-silylated allylic radical followed by a dimerization reaction in the head to head manner.     

Selective syntheses of vinylenedithiathiophenes (VDTTs) and dithieno[2,3-b;2′,3′-d]thiophenes (DTTs); building blocks for π-conjugated systems

Selective syntheses of 3,4-vinylenedithiathiophenes (VDTTs) and dithieno[2,3-b;2′,3′-d]thiophenes (DTTs), having Ph, 4-CH₃OC₆H₄, 4-BrC₆H₄, 4-NO₂C₆H₄ and 4-(CH₃)₂NC₆H₄ groups, were achieved through the reaction of 1,8-diketone with phosphorus decasulfide (P₄S₁₀). The reaction could be shifted between VDTT and DTT by adding base (sodium bicarbonate) or acid (para-toluenesulfonic acid), respectively, to the reaction mixture. While the VDTTs were obtained in moderate yields, an important achievement has been made with the syntheses of the DTTs, obtaining them in higher yields compared with the previous report. Polymers of the VDTTs, which are the analogues of ethylenedioxythiophene, EDOT, were prepared using FeCl₃. Unfortunately, all attempts for their electropolymerization failed. Spin density calculations revealed that none of the VDTTs had a significant positive spin density at the ‘α’ carbon atoms of the thiophene ring. Considering their solubility and functional groups, which could be further derivatized, they are useful building blocks for the preparation of new organic materials.     

Rotamerisation and intramolecular proton transfer of 2-(2′-hydroxyphenyl)oxazole, 2-(2′-hydroxyphenyl)imidazole and 2-(2′-hydroxyphenyl)thiazole: a theoretical study

Semi-empirical (AM1-SCI) calculations have been performed on 2-(2′-hydroxyphenyl)oxazole (HPO), 2-(2′-hydroxyphenyl)imidazole (HPI) and 2-(2′-hydroxyphenyl)thiazole (HPT) to rationalise the photophysical behaviour of the compounds exhibiting intramolecular rotation as well as excited state intramolecular proton transfer (ESIPT). The calculations reveal that there is a gradual variation in the properties from HPO to HPT through HPI so far as the existence of the rotational isomers in the ground state is concerned. While HPO gives rise to two stable rotamers (I and II) in all the common solvents, there is only one stable species for HPT in the S₀ state. For HPI, rotamer II is possible only in the isolated state and/or in solvents of low polarity, but in high polar solvents it gives rise to the normal form (I) only. For all the molecules in the series, however, intramolecular proton transfer (IPT) takes place in the lowest excited singlet (S₁) and the triplet (T₁) states. Combination of the rotamerism and ESIPT gives rise to multiple fluorescence bands for the fluorophores. Theoretical assignments have been made for the excitation, fluorescence and phosphorescence bands. Simulated potential energy curves (PEC) in different electronic states reveal that the IPT process is feasible in either of the S₁ and T₁ states but not in the ground state. The ESIPT reaction has been found to be favoured both thermodynamically and kinetically in these electronic states compared to the ground state. However, quantum mechanical tunnelling has been proposed for the prototropic reaction to proceed in the excited states.     

Derivatives of benzo[4,5]cyclohepta[1,2-b]thiophene. 1. Synthesis and cyclization of N-(9,10-dihydro-4H-benzo[4,5]cyclohepta-[1,2--6]thiophene-4-ylmethyl)amides

Starting from ketone III several acyl derivatives of 4-aminomethyl-9,10-dihydro-4H-benzo[4,5]cyclohepta-[1,2--6]thiophene (VII) have been synthesized. The intramolecular cyclization of some of these new amides through the Bischler-Napieralski reaction is described.     

Synthetic investigations of (1,3′)-bistetrahydroisoquinolines: towards pentacyclic analogues of piperazine core alkaloids

Synthetic investigations of (1,3′)-bistetrahydroisoquinolines are reported as the key intermediates for the synthesis of ecteinascidin and phthalascidin pentacyclic structure analogues through successive Pictet-Spengler cyclization and intramolecular peptide coupling. The direct Pictet-Spengler reaction between a derivative of l-DOPA and N-protected-α-aminoaldehyde was first extended to the synthesis of cis-(1,3′)-bistetrahydroisoquinoline. After introduction of the required amino acid moiety, an efficient six-membered ring intramolecular peptide coupling gave rise to piperazine derivative structures. Complete structural assignments were corroborated by NMR and X-ray spectroscopic methods. Nevertheless, the optical integrity of the N-protected-α-aminoaldehyde seems to be sensitive to the reaction conditions. Pentacylic structures, having an anti C3-C11 backbone stereochemistry, were obtained from cyclization para- and ortho- to the 3-OH group of the l-DOPA derivative.     

Metalated nitriles: stereodivergent cation-controlled cyclizations

Stereodivergent cyclizations of γ-hydroxy cyclohexanecarbonitriles are controlled simply through judicious choice of cation in the alkylmetal base. Deprotonating a series of cyclic γ-hydroxy nitriles with i-PrMgBr generates C-magnesiated nitriles that cyclize under stereoelectronic control to cis-fused hydrindanes, decalins, and bicyclo[5.4.0]undecanes. An analogous deprotonation with BuLi triggers cyclization to trans-fused hydrindanes, decalins, and bicyclo[5.4.0]undecanes consistent with a sterically controlled electrophilic attack on an equatorial nitrile anion. Using cations to control the geometry of metalated nitriles provides a versatile, stereodivergent cyclization to cis- and trans-hydrindanes, decalins, and [5.4.0]undecanes, and reveals the key geometric requirements for intramolecular S_N2 and S_N2′ displacements.     

Application and details of photoinduced oxidative cyclization of 5-(4′,9′-methanocycloundeca-2′,4′,6′,8′,10′-pentaenylidene)pyrimidine-2,4,6(1,3,5H)-triones and related compounds

As novel methodology for synthesizing the furan ring, a photoinduced oxidative cyclization of 5-(4′,9′-methanocycloundeca-2′,4′,6′,8′,10′-pentaenylidene)pyrimidine-2,4,6(1,3,5H)-triones (7a-c) and related compounds 9a-c was accomplished to give 5,10-methanocycloundeca[4,5]furo[2,3-d]pyrimidine-2,4(1,3H)-dionylium tetrafluoroborates (8a-c⁺·BF₄⁻) and related compounds 2a-c⁺·BF₄⁻, respectively. In the photoinduced oxidative cyclization, the molecular oxygen in air is used as oxidant and the reaction proceeds under mild conditions to give desired products without byproducts, and thus, it is interesting from the viewpoint of the green chemistry. On the reactions of the mono-substituted derivatives 7d,e and 9e,f, the selectivity of the photoinduced cyclizations were reversed as compared with those of the DDQ-promoted oxidative cyclizations. By the NMR monitoring of the reactions of 7a and deuterated compound 7a-D₂ under degassed conditions, the details of the reaction pathway were clarified and rationalized on the basis of the MO calculation by the 6-31G^∗ basis set of the MP2 levels as well.     

Preparation and properties of nitrogen-substituted thiosulfinyl compounds and related new heterocycles

The reaction of dilithiated N,N′-dimethyl-1,2-diphenylethylenediamine with disulfur dichloride (S₂Cl₂) gave a thiosulfinyl compound (R₂N)₂SS, 2,5-dimethyl-3,4-diphenyl-1,2,5-thiadiazolidine 1-sulfide, whereas the treatment of dilithiated N,N′-bis(p-toluenesulfonyl)-1,2-diphenylethylenediamine with S₂Cl₂ furnished a new heterocycle, 3,6-bis(p-toluenesulfonyl)-4,5-diphenyl-4H,5H-1,2,3,6-dithiadiazine.     

Arching a bay area of triphenyleno[1,12-bcd]thiophene with group 14 functionalities: Synthesis of the first triphenylene derivatives having thiophene and metallafluorene moieties

Arching a bay area of triphenyleno[1,12-bcd]thiophene with group 14 functionalities gave the first triphenylene derivatives whose two pairs of bay carbons are connected by two different heteroatom functionalities. Triphenyleno[1,12-bcd:4,5-b′c′d′]dithiophene, which had been only accessible through the very severe reaction conditions, was synthesized under the mild reaction conditions. Photophysical properties of newly-obtained heterolotriphenylene derivatives are discussed with theoretical calculations.     

Intramolecular amidation: synthesis of novel imidazo[2,1-b][1,3,4]thiadiazole and imidazo[2,1-b][1,3]thiazole fused diazepinones

Novel heterocyclic systems 2-alkyl/aryl-9-(2-hydroxybenzylidene)-7,9-dihydro-8H-[1,3,4]thiadiazolo[2′,3′:2,3]imidazo[4,5-d][1,2]diazepin-8-one and 9-(2-hydroxy-benzylidene)-3,3-dimethyl-3,4,7,9-tetrahydro-2H-11-thia-4b,6,7,10-tetraazaindeno[1,2-a]azulene-1,8-dione are synthesized via an intramolecular amidation reaction. An interesting ring opening and cyclization of 2-alkyl/aryl-6-(2-oxo-2H-chromen-3-yl)imidazo[2,1-b][1,3,4]thiadiazole-5-carbaldehyde and 6,6-dimethyl-8-oxo-2-(2-oxo-2H-chromen-3-yl)-5,6,7,8-tetrahydroimidazo[2,1-b][1,3]benzothiazole-3-carbaldehyde are discussed.     

Diastereoselective synthesis of 1-alkyl-2,4,6-trioxoperhydropyrimidine-5-spiro-3′-(1′,2′,3′,4′-tetrahydroquinolines)

Knoevenagel products formed by the condensation of N-monoalkyl barbituric acids with o-tert-amino benzaldehydes undergo tert-amino effect reactions (T-reactions) yielding 1-alkyl-2,4,6-trioxoperhydropyrimidine-5-spiro-3′-(1′,2′,3′,4′-tetrahydroquinoline) derivatives as a mixture of (S^∗,S^∗)- and (S^∗,R^∗)-diastereomers. Mostly, the major diastereomer has the S^∗,S^∗-configuration. According to X-ray diffraction data in the solid form and NOE data in solution, diastereoselectivity of the T-reactions can be associated with the structure of the Knoevenagel products whose conformation is fixed by the strong intramolecular C-H?π interaction.     

Synthesis and reactions of thiophene sulfides. Communication 40. An unusual reaction of 2,5-bis(methylthio)-3,4-bis(o-hydroxyphenyliminomethyl)thiophene

Conclusions In polar solvents (ethanol and chloroform), 2,5-bis(methylthio)-3,4-bis-(o-hydroxyphenyliminomethyl) thiophene undergoes intramolecular rearrangement to 2,5-bis(methylthio)-3-(2-benzoxazolyl)-4-(o-hydroxyphenylaminomethyl) thiophene.Translated from Izvestiya Akademii Nauk SSSR, Seriya Khimicheskaya, No. 12, pp. 2750–2753, December, 1985.     

Synthesis,antibacterial and antifungal activities of new chiral 5-alkyl-3-(1′-benzenesulfonylpyrrolidin-2′-yl)-4,5-dihydro-1,2,4-oxadiazin-6-ones

Chiral α-bromoacid chlorides can be easily prepared from amino acids. Their condensation with new 1-benzenesulfonylpyrrolidin-2-carboxamidoxime derived from proline lead to the corresponding O-(bromoacyl) amidoximes. The latter afforded new chiral 5-alkyl-3-(1′-benzenesulfonylpyrrolidin-2′-yl)-4,5-dihydro-1,2,4oxadiazin-6-ones in good chemical yields via intramolecular cyclization in the presence of one equivalent of NaH. These new compounds were evaluated for their antibacterial and antifungal activities using micro-dilution tests against some strains of bacteria and fungi. Our compounds showed an excellent antibacterial activity, which is better than the drug levofloxacin.     

Synthesis and structural characterization of 1,8-biscobaltocen-1′-ylium-naphthalene dication: Towards paramagnetic, cofacially stacked metallocenes

The double nucleophilic addition of 1,8-dilithionaphthalene to cobaltocenium cations reveals the neutral dinuclear complex 1,8-bis[(η⁵-cyclopentadienyl)(η⁴-1′,3′-cyclopentadien-5′-yl)cobalt(I)]-naphthalene (2). Abstraction of two hydrides yields the dinuclear dicationic complex 1,8-biscobaltocen-1′-ylium-naphthalene bis(tetrafluoroborate) (3(BF₄)₂). Both complexes are characterized by X-ray structure analysis. In addition, the redox chemistry of 3(BF₄)₂ was investigated, demonstrating the electrochemical stability of three oxidation states +2, +1 and 0.