首页 | 本学科首页   官方微博 | 高级检索  
相似文献
 共查询到20条相似文献,搜索用时 46 毫秒
1.
N-H···π hydrogen-bonded (H-bonded) structures were studied by applying vibrational spectroscopy to self-aggregate clusters of 2,5-dimethylpyrrole (DMPy) and its binary clusters with pyrrole (Py). The NH stretching vibrations of jet-cooled clusters were observed by IR cavity ringdown spectroscopy. A combination of experiments and density functional theory calculations revealed the stable structures, intermolecular binding energies, and harmonic vibrational frequencies. The IR spectrum of the DMPy self-aggregate clusters was very similar in spectral features to that of the Py clusters in a previous work. The observed NH stretching vibrations at 3505, 3420, 3371, and 3353 cm(-1) are simultaneously red-shifted by ~25 cm(-1) from the Py monomer, dimer, trimer, and tetramer, respectively. Based on a spectral analogy of DMPy with Py, and a consistency of the calculated harmonic frequencies with experiments, the H-bonded structures of the DMPy clusters were determined to be of a T-shape for a dimer and a cyclic for a trimer and a tetramer. For the DMPy-Py binary clusters, we discussed the stability and geometry of the N-H···π interactions in the T-shaped dimer and the cyclic trimer. The binary dimer showed the only single NH stretch at 3419 cm(-1) in the IR spectrum. A vibrational analysis of the H-bonded NH stretches as well as the calculated stabilization energies deduced that only the binary dimer by DMPy as an acceptor and Py as a donor can exist in a supersonic jet. For binary trimers, NH stretches were observed due to both (DMPy)(2)-(Py)(1) and (DMPy)(1)-(Py)(2). They were found to have different vibrational patterns from each other; the former showed three dispersed NH stretches, and the other had two quasi-degenerate NH stretches. Throughout this study, we also considered the intermolecular geometries, such as the H-bond distance and the angle in terms of the methyl group substitution effect.  相似文献   

2.
The electronic and infrared spectra of 2-fluoropyridine-methanol clusters were observed in a supersonic free jet. The structure of hydrogen-bonded clusters of 2-fluoropyridine with methanol was studied on the basis of the molecular orbital calculations. The IR spectra of 2-fluoropyridine-(CH3OH)n(n = 1-3) clusters were observed with a fluorescence-detected infrared depletion (FDIR) technique in the OH and CH stretching vibrational regions. The structures of the clusters are similar to those observed for 2-fluoropyridine-(H2O)n (n = 1-3) clusters. The existence of weak hydrogen bond interaction through aromatic hydrogen was observed in the IR spectra. The theoretical calculation also supports the result. The vibrational frequencies of CH bonds in CH3 group are affected by hydrogen bond formation although these bonds do not directly relate to the hydrogen bond interaction. The B3LYP/6-311 ++G(d,p) calculations reproduce well the vibrational frequency of the hydrogen-bonded OH stretching vibrations. However, the calculated frequency of CH stretching vibration could not reproduce the IR spectra because of anharmonic interaction with closely lying overtone or combination bands for nu3 and nu9 vibrations. The vibrational shift of nu2 vibration is reproduced well with molecular orbital calculations. The calculation also shows that the frequency shift of nu2 vibration is closely related to the CH bond length at the trans position against the OH bond in hydrogen-bonded methanol.  相似文献   

3.
The hydrogen-bonded clusters of 2-fluoropyridine with water were studied experimentally in a supersonic free jet and analyzed with molecular orbital calculations. The IR spectra of 2-fluoropyridine-(H2O)(n) (n = 1 to 3) clusters were observed with a fluorescence detected infrared depletion (FDIR) technique in the OH and CH stretching vibrational regions. The frequencies of OH stretching vibrations show that water molecules bond to the nitrogen atom of 2-fluoropyridine in the clusters. The hydrogen-bond formation between aromatic CH and O was evidenced in the 1:2 and 1:3 clusters from the experimental and calculated results. The overtone vibrations of the OH bending mode in hydrogen-bonded water molecules appear in the IR spectra, and these frequencies become higher with the increase of the number of water molecules in the clusters. The band structure of the IR spectra in the CH stretching region changes depending on the number of coordinating water molecules.  相似文献   

4.
Combined use of IR, Raman, neutron scattering and fluorescence measurements for porphycene isolated in helium nanodroplets, supersonic jet and cryogenic matrices, as well as for solid and liquid solutions, resulted in the assignments of almost all of 108 fundamental vibrations. The puzzling feature of porphycene is the apparent lack of the N-H stretching band in the IR spectrum, predicted to be the strongest of all bands by standard harmonic calculations. Theoretical modeling of the IR spectra, based on ab initio molecular dynamics simulations, reveals that the N-H stretching mode should appear as an extremely broad band in the 2250-3000 cm(-1) region. Coupling of the N-H stretching vibration to other modes is discussed in the context of multidimensional character of intramolecular double hydrogen transfer in porphycene. The analysis can be generalized to other strongly hydrogen-bonded systems.  相似文献   

5.
The identification and characterization of NH 2 hydrogen-bonded stretching vibrations [nu(NH 2)] in DNA oligomers is usually hampered by the all-dominating absorption of the water stretching band in the spectral range of 3050-3600 cm(-1). Here, we use the two-color IR pump-probe technique to overcome the limitations of linear absorption spectroscopy by exciting adenine-thymine (A-T) oligomer vibrations in the fingerprint region and analyzing induced transient spectral changes in the nu(NH2) spectral region. These transient changes are related to anharmonic couplings to the modes excited in the fingerprint region and to modes populated by intra- and intermolecular energy redistribution and relaxation. The combination of calculated anharmonic coupling parameters and experimental transient IR data allows the assignment of a transition at 3215 cm(-1) to the nu(NH2) vibration of adenine in dA(20)-dT(20) DNA oligomers.  相似文献   

6.
The 400-4000 cm(-1) FTIR spectra of pure NH and isotopically substituted (10 and 90% doped ND/NH) polycrystalline L-alanine were recorded in the temperature range 10-300 K. The observed temperature dependence and isotopic shifts behavior enabled to identify, in the spectra of the doped crystals, three well-separated bands ascribable to either the NH or ND stretching vibrations associated with the three different types of hydrogen bonds existing in the crystal. The observed red shifts of these bands relative to the frequency of a reference "free" NH (or ND) stretching mode were found to correlate well with the H-bond distances found in the crystal and provide an indirect way of estimating the enthalpies associated with each type of H-bond found in the crystal. In the low-frequency deformation and torsional spectral region (below 2000 cm(-1)), several bands, which were found to be affected by isotopic substitution, were identified as belonging to the NH3(+) group. Several bands show splitting at low temperatures, indicating the occurrence of a significant reorganization in the crystal structure, which with all probability results mainly from changes in the proton positions. Finally, the literature assignments of the IR spectra of both crystalline NH3(+) and ND3(+) L-alanine were revised taking into consideration their temperature dependence and behavior upon deuteration.  相似文献   

7.
The vibrational characteristics (vibrational frequencies and infrared intensities) for the hydrogen-bonded systems of nicotinamide (NA(Z) and NA(E)) with dimethyl sulfoxide (DMSO) have been predicted using ab initio SCF/6-31G(d,p) and DFT (BLYP/6-311++G(d,p)) calculations. The changes in the vibrational characteristics from free monomers to a complex have been calculated. The ab initio and BLYP calculations show that the complexation between nicotinamide (NA(Z) and NA(E)) and DMSO leads to large red shifts of the stretching vibrations for the hydrogen-bonded N-H bonds of nicotinamide and very strong increase in their IR intensity. The results from the BLYP/6-311++G(d,p) calculations show that the predicted red shifts of the nu(s)(NH) and nu(as)(NH) vibrations for the complex NA(E)-DMSO (1:2) (Deltanu(as)(NH)=-186 cm(-1) and Deltanu(s)(NH)=-198 cm(-1)) are in better agreement with the experimentally measured. The magnitudes of the wavenumber shifts are indicative of strong NH...O hydrogen-bonded interactions in both complexes. The calculations predict an increase of the IR intensity of nu(s)(NH) and nu(as)(NH) vibrations in the complexes up to 14 times. Having in mind that in more cases the predicted changes in the vibrational characteristics for the complexes studied are very near, it could be concluded that both conformers of nicotinamide, Z-conformer and E-conformer, are present in the solution forming the hydrogen-bonded complexes with DMSO.  相似文献   

8.
Effect of water on the formamide-intercalation of kaolinite   总被引:12,自引:0,他引:12  
The molecular structures of low defect kaolinite completely intercalated with formamide and formamide-water mixtures have been determined using a combination of X-ray diffraction, thermoanalytical techniques, DRIFT and Raman spectroscopy. Expansion of the kaolinite to 10.09 A was observed with subtle differences whether the kaolinite was expanded with formamide or formamide-water mixtures. Thermal analysis showed that greater amounts of formamide could be intercalated into the kaolinite in the presence of water. New infrared bands were observed for the formamide intercalated kaolinites at 3648, 3630 and 3606 cm(-1). These bands are attributed to the hydroxyl stretching frequencies of the inner surface hydroxyls hydrogen bonded to formamide with water, formamide and interlamellar water. Bands were observed at similar positions in the Raman spectrum. At liquid nitrogen temperature, the 3630 cm(-1) Raman band separated into two bands at 3633 and 3625 cm(-1). DRIFT spectra showed the hydroxyl deformation mode at 905 cm(-1). Changes in the molecular structure of the formamide are observed through both the NH stretching vibrations and the amide 1 and 2 bands. Upon intercalation of kaolinite with formamide, bands are observed at 3460, 3344, 3248 and 3167 cm(-1) attributed to the NH stretching vibration of the NH involved with hydrogen bonded to the oxygens of the kaolinite siloxane surface. In the DRIFT spectra of the formamide intercalated kaolinites bands are observed at 1700 and 1671 cm(-1) and are attributed to the amide 1 and amide 2 vibrations.  相似文献   

9.
Blue-shifting C-H···O hydrogen-bonded complexes between enflurane (CHFCl-CF(2)-O-CHF(2)) and deuterated acetone have been identified in CCl(4) solution by FT-IR spectroscopy. For the two ν(C-H) stretching vibrations of enflurane the observed blue shifts are +17 and +11 cm(-1). The corresponding two infrared ν(C-H) bands show the opposite changes of their intensity, one is decreasing, and the other is significantly increasing, upon formation of the hydrogen bonding. The structures, binding energies, and theoretical infrared spectra of the enflurane-acetone complexes were calculated by MP2 and B3LYP methods using the 6-311++G(d,p) basis set. The interaction energies were evaluated by the complete basis set limit (CBS) calculations at the HF, MP2, and CCSD(T) levels of theory. Although the MP2 method slightly overestimates the blue shifts, the MP2 predicted frequency difference and the relative IR intensities of two ν(C-H) stretching bands for the enflurane-acetone complexes show good agreement with experiment. Unfortunately, the B3LYP method predicts incorrect IR intensities of these hydrogen-bonded systems. The NBO analysis was performed to unravel the origin of the unusual intensity changes of two ν(C-H) stretching bands, in enflurane complexes.  相似文献   

10.
Infrared spectra of Li(NH3)(n) clusters as a function of size are reported for the first time. Spectra have been recorded in the N-H stretching region for n=4-->7 using a mass-selective photodissociation technique. For the n=4 cluster, three distinct IR absorption bands are seen over a relatively narrow region, whereas the larger clusters yield additional features at higher frequencies. Ab initio calculations have been carried out in support of these experiments for the specific cases of n=4 and 5 for various isomers of these clusters. The bands observed in the spectrum for Li(NH3)(4) can all be attributed to N-H stretching vibrations from solvent molecules in the first solvation shell. The appearance of higher frequency N-H stretching bands for n > or =5 is assigned to the presence of ammonia molecules located in a second solvent shell. These data provide strong support for previous suggestions, based on gas phase photoionization measurements, that the first solvation shell for Li(NH3)(n) is complete at n=4. They are also consistent with neutron diffraction studies of concentrated lithium/liquid ammonia solutions, where Li(NH3)(4) is found to be the basic structural motif.  相似文献   

11.
Infrared spectra of the NH stretching vibrations of (NH3)n clusters (n = 2-4) have been obtained using the helium droplet isolation technique and first principles electronic structure anharmonic calculations. The measured spectra exhibit well-resolved bands, which have been assigned to the nu1, nu3, and 2nu4 modes of the ammonia fragments in the clusters. The formation of a hydrogen bond in ammonia dimers leads to an increase of the infrared intensity by about a factor of 4. In the larger clusters the infrared intensity per hydrogen bond is close to that found in dimers and approaches the value in the NH3 crystal. The intensity of the 2nu4 overtone band in the trimer and tetramer increases by a factor of 10 relative to that in the monomer and dimer, and is comparable to the intensity of the nu1 and nu3 fundamental bands in larger clusters. This indicates the onset of the strong anharmonic coupling of the 2nu4 and nu1 modes in larger clusters. The experimental assignments are compared to the ones obtained from first principles electronic structure anharmonic calculations for the dimer and trimer clusters. The anharmonic calculations were performed at the M?ller-Plesset (MP2) level of electronic structure theory and were based on a second-order perturbative evaluation of rovibrational parameters and their effects on the vibrational spectra and average structures. In general, there is excellent (<20 cm(-1)) agreement between the experimentally measured band origins for the N-H stretching frequencies and the calculated anharmonic vibrational frequencies. However, the calculations were found to overestimate the infrared intensities in clusters by about a factor of 4.  相似文献   

12.
Vibrational circular dichroism (VCD) and infrared (IR) absorption spectra in the NH stretching region have been measured for the dipeptides, R′COAANHR′'(R′ = Me and tertBu; AA = Ala, Leu, Val and Phe; R′' = Me, isoBu and neoPe). Analyses of the VCD and absorption spectra indicated that the VCD bands for the NH stretching are quite sensitive to the state of hydrogen bonding as well as the local conformation of oligopeptides. VCD spectra exhibit a negative VCD band at 3420-3405 cm−1 due to the C5 conformer with an intramolecularly hydrogen-bonded five-membered ring. The intermolecularly hydrogen-bonded NH stretching vibration exhibits a characteristic negative—positive couplet from the high wavenumber side due to the antiparallel C5C5 dimer formation. Hydrogen-bonded oligomers beyond the dimer formed in highly concentrated solutions give rise to an additional negative VCD band on the lower wavenumber side of the hydrogen-bonded absorption band.  相似文献   

13.
Complete (full) set of the polarised IR and Raman spectra for the gamma-glycine single crystal at room temperature are presented. The polarised IR spectra were measured by the specular reflection method and the spectra of the imaginary parts of the refractive indices were computed by Kramers-Kronig transformation. The polarised properties of the bands are discussed with respect to the normal coordinate analysis (literature data) and diffraction crystal data (oriented gas model approximation). A very good agreement between the polarised properties of the bands and simple models of vibrations are observed for the stretching vibrations of the CH2 and COO- group. It is not the case for most of the deformation vibrations of the carboxylic group and of the skeleton. The polarization properties of the stretching vibrations of the NH3+ group are determined by their hydrogen bondings.  相似文献   

14.
The infrared (IR) spectra of the supersonic-jet cooled 9H- and 7H-tautomers of 2-aminopurine (2AP) and of the 9H-2-aminopurine·H(2)O monohydrate clusters have been measured by mass- and species-selective IR-UV double resonance spectroscopy in the 3200-3900 cm(-1) region, covering the N-H and O-H stretching vibrations. The spectra are complemented by density functional (B3LYP and PW91) and by second-order M?ller-Plesset (MP2) calculations of the electronic energies and vibrational frequenciesof the respective 2AP tautomers and clusters. The 9H- and 7H-2-aminopurine tautomers were definitively identified by the shifts of their NH and NH(2) symmetric and asymmetric stretching frequencies and by comparison to the B3LYP/TZVP calculated IR spectra. The H-bond topologies of the two previously observed 9H-2-aminopurine·H(2)O isomers (Sinha. R. K.; et al. J. Phys. Chem. A2011, 115, 6208) are definitively identified as the "sugar-edge" isomer A and the "trans-amino-bound" isomer B by comparing their IR spectra to the calculated frequencies and IR intensities of the cluster isomers A, B, C, and D, as well as to the IR spectrum of 9H-2AP. The sugar-edge isomer A involves N9-H···OH(2) and HOH···N3 hydrogen bonds and is predicted to be the most stable form. The amino-bound isomer B involves NH(2)···OH(2) and HOH···N1 hydrogen bonds and is calculated to lie 2.5 kJ/mol above isomer A. The H-bond topology of the "cis-amino-bound" isomer C is symmetrically related to isomer B, with a hydrogen bond to the N3 of the pyrimidine group. However, it is calculated to lie 7 kJ/mol above isomer A and indeed is not observed in the supersonic jet. Isomer D involves a single H-bond to the N7 position, is predicted to be 14 kJ/mol above A and is therefore not observed.  相似文献   

15.
High signal-to-noise ratio (S/N) Raman spectra of (NH(4))(2)SO(4) droplets deposited on a quartz substrate were obtained from dilute to supersaturated states upon decreasing the relative humidity (RH). When the molar water-to-solute ratio (WSR) decreases from 16.8 to 3.2, the v(1)-SO(4)(2-) band changes very little, that is, showing a red-shift of only about 1 cm(-1) (from 979.9 to 978.8 cm(-1)) and an increase of its full width at half-maximum (fwhm) from 8.3 to 9.8 cm(-1). Other vibration modes such as v(2)- and v(4)-SO(4)(2-) bands appear almost constantly at 452 and 615 cm(-1). Such kind of a spectroscopic characteristic is different from previous observation on other cations, indicating that the interactions between SO(4)(2-) and NH(4)+ in supersaturated states are similar to those between SO(4)(2-) and H(2)O in dilute states. After fitting the Raman spectra with Gaussian functions in the spectral range of 2400-4000 cm(-1), we successfully extracted six components at positions of 2878.7, 3032.1, 3115.0, 3248.9, 3468.4, and 3628.8 cm(-1), respectively. The first three components are assigned to the second overtone of NH(4)+ umbrella bending, the combination band of NH(4)+ umbrella bending and rocking vibrations, and the NH(4)+ symmetric stretching vibration, while the latter three components are from the strongly, weakly, and slightly hydrogen-bonded components of water molecules, respectively. With a decrease of the RH, the proportion of the strongly hydrogen-bonded components increases, while that of the weakly hydrogen-bonded components decreases in the droplets. The coexistence of strongly, weakly, and slightly hydrogen-bonded water molecules must hint at a similar hydrogen-bonding network of NH(4)+, SO(4)(2-), and H(2)O to that of pure liquid water in supersaturated (NH(4))(2)SO(4) droplets.  相似文献   

16.
Fiber-optic evanescent wave infrared spectroscopy was used for the study of water diffusion in Teflon and has provided valuable information about the structure of water in amorphous hydrophobic polymers. Time-dependent absorption measurements were carried out in two spectral ranges: 3000-3800 cm(-1), associated with the O-H stretching mode, and 1620-1670 cm(-1), associated with the H-O-H bending mode of water. The results indicate that the IR spectra could be expressed as a superposition of spectra due to two species of water molecules: strongly and weakly hydrogen-bonded. We suggest that water molecules form clusters with strongly hydrogen-bonded molecules at the cores and with weakly hydrogen-bonded molecules at the external parts of the clusters. A mathematical model, based on a linear diffusion equation with a moving boundary, gave a ratio of 3.5 between the total number of molecules in a cluster and the number of water molecules at the core of the cluster.  相似文献   

17.
Infrared photodissociation spectra of Al(+)(CH(3)OH)(n) (n = 1-4) and Al(+)(CH(3)OH)(n)-Ar (n = 1-3) were measured in the OH stretching region, 3000-3800 cm(-1). For n = 1 and 2, sharp absorption bands were observed in the free OH stretching region, all of which were well reproduced by the spectra calculated for the solvated-type geometry with no hydrogen bond. For n = 3 and 4, there were broad vibrational bands in the energy region of hydrogen-bonded OH stretching vibrations, 3000-3500 cm(-1). Energies of possible isomers for the Al(+)(CH(3)OH)(3),4 ions with hydrogen bonds were calculated in order to assign these bands. It was found that the third and fourth methanol molecules form hydrogen bonds with methanol molecules in the first solvation shell, rather than a direct bonding with the Al(+) ion. For the Al(+)(CH(3)OH)(n) clusters with n = 1-4, we obtained no evidence of the insertion reaction, which occurs in Al(+)(H(2)O)(n). One possible explanation of the difference between these two systems is that the potential energy barriers between the solvated and inserted isomers in the Al(+)(CH(3)OH)(n) system is too high to form the inserted-type isomers.  相似文献   

18.
Near-infrared (NIR) spectroscopy has been used to analyse a suite of synthesised jarosites of formula Mn(Fe3+)6(SO4)4(OH)12 where M is K, Na, Ag, Pb, NH4+ and H3O+. Whilst the spectra of the jarosites show a common pattern, differences in the spectra are observed which enable the minerals to be distinguished. The NIR bands in the 6300-7000 cm-1 region are attributed to the first fundamental overtone of the infrared and Raman hydroxyl stretching vibrations. The NIR spectrum of the ammonium-jarosite shows additional bands at 6460 and 6143 cm-1, attributed to the first fundamental overtones of NH stretching vibrations. A set of bands are observed in the 4700-5500 cm-1 region which are assigned to combination bands of the hydroxyl stretching and deformation vibrations. The ammonium-jarosite shows additional bands at 4730 and 4621 cm-1, attributed to the combination of NH stretching and bending vibrations. NIR spectroscopy has the ability to distinguish between the jarosite minerals even when the formula of the minerals is closely related. The NIR spectroscopic technique has great potential as a mineral exploratory tool on planets and in particular Mars.  相似文献   

19.
The vibrational characteristics (vibrational frequencies and infrared intensities) for the hydrogen-bonded complex of phenol with four water molecules PhOH...(H2O)4 (structure 4A) have been predicted using ab initio and DFT (B3LYP) calculations with 6-31G(d,p) basis set. The changes in the vibrational characteristics from free monomers to a complex have been calculated. The ab initio and B3LYP calculations show that the observed four intense bands at 3299, 3341, 3386 and 3430 cm(-1) can be assigned to the hydrogen-bonded OH stretching vibrations in the complex PhOH...(H2O)4 (4A). The complexation leads to very large red shifts of these vibrations and very strong increase in their IR intensity. The predicted red shifts for these vibrations with B3LYP/6-31G(d,p) calculations are in very good agreement with the experimentally observed. It was established that the phenolic OH stretching vibration is the most sensitive to the hydrogen bonding. The predicted red-shift with the B3LYP/6-31G(d,p) calculations for the most stable ring structure 4A (-590 cm(-1)) is in better agreement with the experimentally observed than the red-shift, predicted with SCF/6-31G(d,p) calculations. The magnitude of the wavenumber shift is indicative of relatively strong OH...H hydrogen-bonded interaction. The complexation between phenol and four water molecules leads to strong increase of the IR intensity of the phenolic OH stretching vibration (up to 38 times).  相似文献   

20.
This paper presents the IR spectra of solid alkyl substituted α,α-, α,β-, and β,β-dipyrrolylmethene hydrobromides and their oxa and thia derivatives recorded in KBr pellets over the frequency range 400–4000 cm?1. The conclusion was drawn that the NH bonds in the pyrrole fragments of α,α-dipyrrolylmethene were identical, as distinct from the α,β and β,β isomers. The influence of functional substitution in the dipyrrolylmethene molecule on the frequencies of NH stretching vibrations was discussed. A satisfactory correlation between NH bond vibrational frequencies and the enthalpies of vaporization of gaseous hydrogen bromide from crystalline samples under heating was observed. This allows the IR data to be used as a criterion of the stability of dipyrrolylmethene salts and their oxa and thia derivatives.  相似文献   

设为首页 | 免责声明 | 关于勤云 | 加入收藏

Copyright©北京勤云科技发展有限公司  京ICP备09084417号