Is phenyl a good migrating group in the rearrangement of organoborates generated from sulfur ylides?

Calculations show that the unexpected low phenyl migratory aptitude observed in reactions of mixed alkyl-aryl boranes with benzylic sulfur ylides can be attributed to (1) a conformational issue, (2) the reduction of the usual neighbouring effect of the phenyl in the transition state by the benzylic nature of the migrating terminus, (3) steric hindrance suffered by the larger phenyl group migrating to the hindered migrating terminus and this despite (4) the increase in the barrier to alkyl migration by the presence of a 'non-migrating' phenyl on the boron atom.     

Synthesis of aromatic polyamidines in Eaton’s reagent

Aromatic polyamidines are prepared via the polycondensation of dicarboxamides and diamines in Eaton’s reagent. The polymers are investigated by elemental analysis and IR and NMR spectroscopy. Polyamidines are well soluble in concentrated sulfuric acid and concentrated formic acid and in polar organic solvents, and temperatures corresponding to their 10% weight losses are in the range 245–280°C.     

Intramolecular Diels-Alder cycloaddition/rearrangement cascade of an amidofuran derivative for the synthesis of (±)-minfiensine

An efficient synthesis of (±)-minfiensine has been accomplished employing an intramolecular Diels-Alder cycloaddition/rearrangement cascade of an amidofuran derivative. Thermal reorganization of the initially formed [4+2]-cycloadduct affords the critical tetrahydroiminoethanocarbazole skeleton of the alkaloid in high yield.     

How reliable is DFT in predicting relative energies of polycyclic aromatic hydrocarbon isomers? comparison of functionals from different rungs of jacob's ladder

Density functional theory (DFT) is the only quantum‐chemical avenue for calculating thermochemical/kinetic properties of large polycyclic aromatic hydrocarbons (PAHs) such as graphene nanoflakes. Using CCSD(T)/CBS PAH isomerization energies, we find that all generalized gradient approximation (GGA) and meta GGA DFT functionals have severe difficulties in describing isomerization energies in PAHs. The poor performance of these functionals is demonstrated by the following root‐mean‐square deviations (RMSDs) obtained for a database of C₁₄H₁₀ and C₁₈H₁₂ isomerization energies. The RMSDs for the GGAs range between 6.0 (BP86‐D3) and 23.0 (SOGGA11) and for the meta GGAs they range between 3.5 (MN12‐L) and 11.9 (τ‐HCTH) kJ mol⁻¹. These functionals (including the dispersion‐corrected methods) systematically and significantly underestimate the isomerization energies. A consequence of this behavior is that they all predict that chrysene (rather than triphenylene) is the most stable C₁₈H₁₂ isomer. A general improvement in performance is observed along the rungs of Jacob's Ladder; however, only a handful of functionals from rung four give good performance for PAH isomerization energies. These include functionals with high percentages (40–50%) of exact Hartree–Fock exchange such as the hybrid GGA SOGGA11‐X (RMSD = 1.7 kJ mol⁻¹) and the hybrid‐meta GGA BMK (RMSD = 1.3 kJ mol⁻¹). Alternatively, the inclusion of lower percentages (20–30%) of exact exchange in conjunction with an empirical dispersion correction results in good performance. For example, the hybrid GGA PBE0‐D3 attains an RMSD of 1.5 kJ mol⁻¹, and the hybrid‐meta GGAs PW6B95‐D3 and B1B95‐D3 result in RMSDs below 1 kJ mol⁻¹. © 2016 Wiley Periodicals, Inc.     

Eaton’s reagent-mediated metal-free and efficient synthesis of NH-sulfoximines

NH-sulfoximines can be prepared efficiently from corresponding sulfoxides in the presence of sodium azide and Eaton’s reagent. This metal-free and efficient methodology is applicable to a wide variety of functionalized sulfoxides to afford NH-sulfoximines in good to excellent yields with shorter reaction time than previously reported methods.     

Naphthalene,a polycyclic aromatic hydrocarbon,in the fish samples from the Bangsai river of Bangladesh by gas chromatograph–mass spectrometry

Naphthalene, a polycyclic aromatic hydrocarbon (PAH), was detected and quantified in the selected varieties of fishes collected from the Bangsai river, one of the contaminated rivers located at Savar near the Dhaka Export Processing Zone (DEPZ), Bangladesh, during the period October 2009. Naphthalene, a carcinogenic compound, was analyzed by GC–MS as it was in the mixture of dichloromethane–hexane (1:1) crude extract of the flesh of fish samples collected from the aforesaid river. A suitable and reliable procedure for the extraction of naphthalene from the fish sample has been developed. A multi-layer clean-up (silica gel) column was used, followed by glass fiber filter (GFF) paper to eliminate the interfering organic compounds as well as the lipids and fat. It was observed that PAHs deposition on the samples takes place in different morphological parts of the biological materials. The PAH, naphthalene, was found in almost all of the fish samples and the concentration of which was in the range 0.030–1.004 μg/g. Recovery studies with fortified samples indicated that the recovery efficiency for naphthalene was about 79.14%. This concentration is within the range of values reported for other comparable regions of the world.     

Novel Schiff base’s complex as a green catalyst for the synthesis of diindolylmethanes under ultrasonics irradiation

A facile and convenient protocol was developed for the synthesis of diindolylmethanes in short reaction time and high yields using newly synthesized complex as an efficient recyclable heterogeneous catalyst. All synthesized compounds were characterized by IR, NMR spectra and elemental analysis.     

(Tosylimino)phenyl-λ3-iodane as a reagent for the synthesis of methyl carbamates via Hofmann rearrangement of aromatic and aliphatic carboxamides

A new, mild procedure for the Hofmann rearrangement of aromatic and aliphatic carboxamides using (tosylimino)phenyl-λ(3)-iodane, PhINTs, as a reagent is reported. Because of the mild reaction conditions, this method is particularly useful for the Hofmann rearrangement of substituted benzamides, which usually afford complex reaction mixtures with other hypervalent iodine oxidants. The mild reaction conditions and high selectivity in the reaction of carboxamides with PhINTs allow the isolation of the initially formed labile isocyanates or their subsequent conversion to stable carbamates by treatment with alcohols.     

Some aspects of polybenzimidazoles’ synthesis in Eaton reagent under different temperatures and microwave irradiation

Solution polycondensations of 3,3′-diaminobenzidine with two dicarboxylic acids, 4,4′-oxybis(benzoic acid) and hexafluoroisopropylidene bis(benzoic acid) to obtain two different polybenzimidazoles, OPBI and CF₃PBI, correspondingly, were studied in terms of formation of processable polymers and insoluble crosslinked gel. The syntheses were conducted in Eaton’s reagent using conventional heating (CH) at 100, 140 and 180?°C and microwave irradiation (MW) at 90 and 100?°C. The content of gel fraction was lesser using high temperature conditions under CH. The MW-assisted syntheses resulted in acceleration of polycondensations, but an abrupt growth of the insoluble gel was also observed under these conditions. The FTIR data showed that MW irradiation stimulated the side acylation reactions, and OPBI suffered more from the side acylation than CF₃PBI.     

Study of lithium-ion battery module’s external short circuit under different temperatures

Journal of Thermal Analysis and Calorimetry - External short circuit has a severe influence on lithium battery’s performance. Currently, a huge study has focused on the single battery’s...     

Tröger’s base derivative-catalyzed one-step one-pot synthesis of chromenofuroindoles and naphthofuroindoles

Research on Chemical Intermediates - A series of N2,N8-bis(nitrogen-containing heterocycle)-yl-2,8-dicarboxamide-Tröger’s bases were synthesized. The most efficient one,...     

Expeditious and efficient synthesis of Strecker’s α-aminonitriles catalyzed by sulfated polyborate

A straightforward, mild, efficient, and environmentally benign protocol for a three-component Strecker reaction of aldehydes or ketones, amines, and trimethylsilyl cyanide catalyzed by sulfated polyborate has been described to afford α-aminonitriles under solvent-free reaction conditions. The major advantages of the present method are excellent yields, shorter reaction time, simple experimental procedure, easy workup procedure, recyclability of the catalyst, solvent-free reaction conditions and ability to tolerate a variety of functional groups which gives economical as well as ecological rewards.     

Valorization of Madagascar’s CNSL via the synthesis of one advanced intermediate (3-Pentadecylcyclohexanone)

A unique advanced intermediate: 3-Pentadecylcyclohexanone was synthetized from the crude product which contained a mixture of cardanol, cardol and 2-methylcardol, which was hydrogenated onto Pd/C at 80 °C. From this alkylated cyclohexanone: C15 alkylated adipic acid, caprolactam, caprolactone, were synthetized in high yields, such products may have many potentially applications in polymer chemistry. The condensation of the 3-pentadecyl-cyclohexanone and triethylene glycol in oxidative or reductive conditions gave aryl ether and cyclohexyl ether, this may be a way to prepare intermediate for surfactant chemistry. Therefore we show that Cashew Nut Shell Liquid (CNSL) may lead to numerous useful compounds thank to the preparation of a unique advanced intermediate.     

Rescoring of docking poses under Occam’s Razor: are there simpler solutions?

Ligand affinity prediction from docking simulations is usually performed by means of highly empirical and diverse protocols. These protocols often involve the re-scoring of poses generated by a force field (FF) based Hamiltonian to provide either estimated binding affinities—or alternatively, some empirical goodness score. Re-scoring is performed by so-called scoring functions—typically, a reweighted sum of FF terms augmented by additional terms (e.g., desolvation/entropic penalty, hydrophobicity, aromatic interactions etc.). Sometimes, the scoring function actually drives ligand positioning, but often it only operates on the best scoring poses ranked top by the initial ligand positioning tool. In either of these rather intricate scenarios, scoring functions are docking-specific models, and most require machine-learning-based calibration. Therefore, docking simulations are less straightforward when compared to “standard” molecular simulations in which the FF Hamiltonian defines the energy, and affinity emerges as an ensemble average property over pools of representative conformers (i.e., the trajectory). Paraphrasing on Occam’s Razor principle, additional model complexity is only acceptable if demonstrated to bring a significant improvement of prediction quality. In this work we therefore examined whether the complexity inherent to scoring functions is indeed justified. For this purpose we compared sampler for multiple protein–ligand entities, a general purpose conformation sampler based on the AMBER/GAFF FF, complemented with continuum solvation terms, with several state of the art docking tools that rely on calibrated scoring functions (Glide, Gold, Autodock-Vina) in terms of its ability to top-rank the actives from large and diverse ligand series associated with various proteins. There is no clear winner of this study, where each program performed well on most of the targets, but also failed with respect to at least one of them. Therefore, a well-parameterized force field with a simple, energy-based ligand ranking protocol appears to be an as effective docking protocol as intricate rescoring strategies based on scoring functions. A tool that can sample the conformational space of the free ligand, the bound ligand and the protein binding site using the same force field may avoid many of the approximations common to contemporary docking protocols and allow e.g., for docking into highly flexible active sites, when current scoring functions are not well suited to estimate receptor strain energies.     

One-pot synthesis of benzoquinoline and coumarin derivatives using Meldrum’s acid in three-component reactions

A series of 1-aryl-1,2-dihydrobenzo[f]quinolin-3(4H)-one derivatives and 4-aryl-7,7-dimethyl-5-oxo-3,4,5,6,7,8-hexahydrocoumarin derivatives have been synthesized by one-pot multicomponent reaction of Meldrum’s acid with benzaldehyde, naphthalene-2-amine, or cyclohexanedione in PEG-400. The method has the advantages of mild reaction conditions, good yields, and easy processing, and is environmentally benign.     

Iranian chemist’s efforts to provide various effective methods for the synthesis of xanthenes

Xanthenes and their derivatives as very important classes of organic compounds are key structural elements of many biologically active compounds. These materials are important heterocyclic nucleus of various dyes and drugs. Because of their wide range of pharmacological, industrial and synthetic applications, many methods for the preparation of xanthenes are reported in the literature. In recent years, among the other chemists, introduction of new methods for the preparation of these types of compounds has attracted the attention of Iranian chemists. The result of these efforts is the introduction of appropriate, effective and efficient methods. In this paper, we have a brief review on these methods and their main advantages and important applicabilities.