The fuzzy D<Subscript>6h</Subscript>-symmetries of azines molecules and their molecular orbitals

Based on our previous study on the elementary characterization of fuzzy symmetry, we inquire into the fuzzy symmetries of some simple linear and plane molecules. These systems belong to point groups that include the identity and twofold symmetry elements, but not include higher multi-fold symmetry ones, and their molecular orbitals (MOs) only belong to one-dimension irreducible representations. In this paper, we take the azines as a typical model to examine the fuzzy symmetry in relation to the D_6h point group. As this group includes multi-fold symmetry elements such as a sixfold rotation axis, some of the MOs may belong to two-dimensional irreducible representations. We inquire into the fuzzy symmetry of these molecules and their MOs in terms of membership functions, representation components and correlation diagrams. In addition to these neutral closed shell molecules, pyridine hydride radical, anion, and cation are also analyzed.     

Group theory and normal coordinate calculations

A method is proposed to obtain a set of computer generated symmetry adapted basis vectors which completely factorize a matrix associated with any operator which commutes with all the symmetry operations of a molecule. The cartesian coordinates of all atoms are used to derive the irreducible representations of the appropriate molecular point group and the transformation properties of any starting set of coordinates. Symmetry coordinates are then projected out each irreducible representation.     

Continuous symmetry measures of irreducible representations: application to molecular orbitals

The formalism of continuous symmetry measures is extended to describe the extent to which a function, such as a molecular orbital, transforms under the symmetry operations of a given point group according to each irreducible representation of this group. For distorted molecules we are able to calculate the degree to which any molecular orbital transforms with respect to the irreducible representations of the pseudosymmetry group that is valid for a higher symmetry, idealized geometry, showing which irreducible representations participate in each molecular orbital upon symmetry loss in the geometry of the nuclear framework.     

A simple representation of energy matrix elements in terms of symmetry‐invariant bases

When a system under consideration has some symmetry, usually its Hamiltonian space can be parallel partitioned into a set of subspaces, which is invariant under symmetry operations. The bases that span these invariant subspaces are also invariant under the symmetry operations, and they are the symmetry‐invariant bases. A standard methodology is available to construct a series of generator functions (GFs) and corresponding symmetry‐adapted basis (SAB) functions from these symmetry‐invariant bases. Elements of the factorized Hamiltonian and overlap matrix can be expressed in terms of these SAB functions, and their simple representations can be deduced in terms of GFs. The application of this method to the Heisenberg spin Hamiltonian is demonstrated. © 2009 Wiley Periodicals, Inc. J Comput Chem, 2010     

General algebraic expressions of totally symmetric potential functions for AXn (n = 3,4) molecules

The integrity bases for representations of the nuclear permutation groups S_n (n = 3,4) in the space of internal coordinates describing AX_n molecules are determined. This allows optimal expressions of the molecular potential energy functions in terms of internal coordinates that are totally symmetric with respect to permutations of indistinguishable nuclei. © 1993 John Wiley & Sons, Inc.     

Full Non-rigid Group of Sponge and Pina

The non-rigid molecule group theory (NRG) in which the dynamical symmetry operations are defined as physical operations is a new field in chemistry. Smeyers and Villa computed the r-NRG of the triple equivalent methyl rotation in pyramidal trimethylamine with inversion and proved that the r-NRG of this molecule is a group of order 648, containing a subgroup of order 324 without inversions (see J. Math. Chem. 28(4) (2000) 377–388). In this work, a computational method is described, by means of which it is possible to calculate the symmetry group of molecules. We study the full non-rigid group (f-NRG) of Sponge and Pina molecules with C ₂ and C _i point groups, respectively. It proved that these are groups of order 162 and 13122 with 54 and 3240 conjugacy classes, respectively. The character tables of these groups are also computed.     

On the evaluation of the geometrical factors utilized in ligand polarization calculations

The utility of the Ligand polarization model in solving many physical problems in quantum mechanics has been appreciated among scientists during the last years. Problems such as electric dipole strength, vibronic electric dipole strength, optical activity calculations have been carried out within the framework of a dynamic coupling mechanism. Taking advantage of the irreducible tensor method put forward by Griffith in the case of molecular symmetry groups, both the molecular states and relevant operators can be classified in terms of irreducible representations of the molecular group in question, and therefore it is most convenient to express the relevant operators involved in any specific calculation in a symmetry adapted form. As a starting point, we may classify our molecular states and operators in the 0-rotation group and lower symmetry groups may also be studied by using simple correlation properties. Here we aim to deal with d-d and f-f type of transitions, and hence the 2² (electric quadrupole), 2⁴ (electric hexadecapole) and the 2⁶-multipoles are considered in some detail. We have adopted, the octahedral set of functions as given by Griffith to define the 2^itl (l = 2, 4, 6) multipoles and obtain the corresponding geometrical factors for the various irreducible representations.     

Symmetry components analysis of nuclear spin–spin coupling constants

Molecular symmetry properties are used to define “normal” spin–spin coupling constants corresponding to some irreducible representations of the symmetry point group of the molecule. The relationship between these normal coupling constants and the measured ones is established in closed form for the most common cases. The Ramsey perturbation formula is analysed into symmetry components by means of the Winger–Eckart theorem. Both contributions predicted by the molecular-orbital method, i. e. direct coupling via σ electrons and indirect coupling via σ–π interaction are studied. Numerical calculations for the coupling constants of ethane, ethylene and acetylene were carried out without the mean excitation energy approximation by using SCF ? MO wave functions; overlap between atomic orbitals is systematically taken into account by calculating coupling constants. Theoretical and experimental results are compared in terms of symmetry components.     

Normal coordinate analysis of H8Si8O12

Normal coordinate analysis of the fundamental vibrations of H₈Si₈O₁₂ has been carried out. Because of the octahedral symmetry, the 78 vibrational degrees of freedom lead to 33 different vibrations, six of which are infrared active, 13 are Raman active and 14 are inactive. From the internal coordinates one gets 116 symmetry coordinates. We describe a straightforward method for determining the internal symmetry coordinates of any molecular system. Internal coordinates, symmetry force constants, the full set of orthonormal symmetry coordinates as well as the 38 redundant orthonormal symmetry coordinates of H₈Si₈O₁₂ are tabulated. The potential energy distribution analysis shows that most of the fundamental vibrations can be very well interpreted in terms of the internal vibrations ν(SiH), ν(SiO), δ(SiH), δ(OSiO) and δ(SiOSi) which makes it easy to compare them with vibrations observed in other silsesquioxanes and similar silicon compounds.     

Study of localized molecular orbitals using group theory methods and its approach to the many-electron correlation problem. IV. The symmetry-adaptation of many-center integrals and hamiltonian matrix elements in MCSCF calculations

Group theoretic methods are presented for the transformations of integrals and the evaluation of matrix elements encountered in multiconfigurational self-consistent field (MCSCF) and configuration interaction (CI) calculations. The method has the advantages of needing only to deal with a symmetry unique set of atomic orbitals (AO) integrals and transformation from unique atomic integrals to unique molecular integrals rather than with all of them. Hamiltonian matrix element is expressed by a linear combination of product terms of many-center unique integrals and geometric factors. The group symmetry localized orbitals as atomic and molecular orbitals are a key feature of this algorithm. The method provides an alternative to traditional method that requires a table of coupling coefficients for products of the irreducible representations of the molecular point group. Geometric factors effectively eliminate these coupling coefficients. The saving of time and space in integral computations and transformations is analyzed. © 1994 by John Wiley & Sons, Inc.     

A study of the internal dynamics of trimethylamine by means of the non-rigid group theory

The non-rigid molecule group theory (NRG) in which the dynamical symmetry operations are defined as physical operations is applied to determine the character table for the triple equivalent methyl rotation and pyramidal inversion in trimethylamine. The restricted NRG of this molecule is seen to be a group of order 648, formed as a product of two subgroups: the G ₃₂₄ subgroup corresponding to planar trimethylamine and the pyramidal inversion. For this purpose the structure of the r-NRG of planar trimethylamine is first deduced, i.e., the number of classes, irreducible representations, as well as their dimensions. Finally, guidelines are given to deduce systematically the symmetry eigenvectors developed on the basis of quadruple products of trigronometric functions. The r-NRG molecule group theory is seen to be used advantageously to study the internal dynamics of such small organic molecules.     

On selection rules of molecules having one,two and three CH3 tops

Symmetry groups are considered which are generated by various associated elements of the molecular symmetry group (PE-group) of the molecule. It is shown that these (associated) symmetry groups are essentially the same symmetry groups used earlier for the classification of the eigen functions and for evaluation of the selection rules for the rotation-torsion and torsional-vibration problem of molecules having one, two, and three CH₃ tops and C_s, C_2v, and C_3v symmetry, respectively.     

Relativistic double group spinor representations of nonrigid molecules

The character theory of relativistic double group spinor representations is developed in order to represent the total rovibronic states of nonrigid molecules. It is shown that the double groups can be represented in terms of wreath products and powerful matrix cycle type generators that are used to construct their character tables. It is shown that these tables are of use when spin-orbit coupling is included in the Hamiltonian even for molecules containing lighter atoms. Applications to nonrigid molecules such as Tl2H4/Tl2H4+ are considered. It is shown that the tunneling splittings and the nuclear spin statistical weights can be obtained for such species using the character tables thus constructed. The spinor double groups of several other molecules such as hexamethyl dilead and heavy weakly bound clusters such as (PoH2)4 are also considered.     

The Fuzzy D2h-symmetries of Ethylene Tetra-halide Molecules and their Molecular Orbitals

Based on our study in relation to the fuzzy symmetry characterization and the application to linear molecule, the fuzzy symmetry of the planar molecules have been analyzed. The prototypical planer molecules we have chosen to study are the C2F3X (X = Cl, Br, and I) and three kinds of C2F2Cl2 isomers. These molecules relate to the fuzzy symmetry in connection with the D2h point group. As we known, the D2h point group includes an identity transformation and seven twofold symmetry transformations but without higher-fold ones. Meanwhile, it is related only to some one-dimensional irreducible representations, but there is not to multi-dimensional irreducible representation. In this paper, the fuzzy symmetries of these molecules and their molecular orbital(MO)s have been studied, such as the membership functions, the representation compositions, the fuzzy correlation diagrams and so on have been analyzed. These analysis methods can be used to analyze the molecular fuzzy symmetries of some other molecule systems, no difficulty.     

Symmetrization of eigenfunctions of angular momentum in point groups

The eigenfunctions |jm〉 of angular momentum can combine linearly to make basis functions of irreducible representations of point groups. We surmount the projection operator and find a new method to calculate the combination coefficients. It is proven that these coefficients are components of eigenvectors of some hermitian matrices, and that for all pure rotation point groups, the coefficients can be made real numbers by properly choosing the azimuth angles of symmetry elements of point groups in the coordinate system. We apply the coupling theory of angular momentum to obtain the general formulas of the basis functions of point groups. By use of our formulas, we have calculated the basis functions with half‐integers j from 1/2 to 13/2 of double‐valued irreducible representations for the icosahedral group. © 2001 John Wiley & Sons, Inc. Int J Quant Chem 83: 286–302, 2001     

M(o)bius环并苯的分子对称性

一般来说,点群理论认为M(o)bius带环分子最高的对称性只能是C2.本文讨论了由18个苯环组成的环并苯的异构体分子,包括柱面的Hückel型分子(HC-[18])和扭转180°的M(o)bius带环分子(MC-[18]).结果表明除了点对称性外,M(o)bius带环分子还存在一种可称为环面螺旋旋转(TSR)变换的对称性,为此还引用了环面正交曲线坐标系.此外,还讨论了这些分子关于TSR对称性匹配的原子集和原子轨道(AO)集.根据TSR对称性的循环群特征,可以建立此类群的不可约表示及有关特征标.这类分子的分子轨道(MO)关于TSR群的不可约表示是纯的,然而所含的相应的原子轨道对称性匹配的线性组合(SALC-AO)成分可以是多种的.     

Discrete spatial symmetries: Redundant coordinates and search for stationary points in reduced spaces

Given the invariance of an N-body system under discrete operations of reflection, inversion, a rotation by 2π/n, and the corresponding relations among the derivatives of energy, we have constructed through an invertible transformation a set of active and redundant coordinates. Movement along the active coordinates preserves all symmetry relations. We show that algorithms for locating stationary points or for calculating reaction paths are exactly separable in these active and redundant coordinates. We further show that this formalism is equally applicable when equations of constraints among coordinates are specified for the movement of particles. This includes geometrical constraints on bond lengths, angles, substituent group internal rotations, etc. This formalism enhances the efficiency since (laborious) cartesian derivatives need to be calculated only for the active variables and that the problem is reduced in term of m(?3N) variables. We apply this procedure to obtain the equilibrium geometry of H₂O molecule within the subspace of C_2v symmetry configurations ab initio derivatives.     

Full non-rigid group theory and symmetry of melamine

The non-rigid molecule group (NRG) theory in which the dynamic symmetry operations are defined as physical operations is a new field in chemistry. Smeyers, in a series of papers, applied this notion to determine the character table of restricted NRG of some molecules. For example, Smeyers and Villa computed the r-NRG of the triple equivalent methyl rotation in pyramidal trimethylamine with inversion and proved that the r-NRG of this molecule is a group of order 648, containing two subgroups of order 324 without inversion [5]. In this work, a simple method is described, through which it is possible to calculate character tables for the symmetry group of molecules. We study the full NRG of melamine, and prove that it is a groups of order 48, with 27 and 10 conjugacy classes. Also, we compute the symmetry of melamine and prove that it is a non-abelian groups of order 6. The method can be generalized to apply to other non-rigid molecules.