Biosynthetic pathways to isocyanides and isothiocyanates; precursor incorporation studies on terpene metabolites in the tropical marine sponges Amphimedon terpenensis and Axinyssa n.sp

The biosynthetic origins of the isocyanide and isothiocyanate functional groups in the marine sponge metabolites diisocyanoadociane (1), 9-isocyanopupukeanane (10) and 9-isothiocyanatopupukeanane (11) are probed by the use of [(14)C]-labelled precursor experiments. Incubation of the sponge Amphimedon terpenensis with [(14)C]-labelled thiocyanate resulted in radioactive diisocyanoadociane (1) in which the radiolabel is specifically associated with the isocyanide carbons. As expected, cyanide and thiocyanate were confirmed as precursors to the pupukeananes 10 and 11 in the sponge Axinyssa n.sp.; additionally these precursors labelled 2-thiocyanatoneopupukeanane (12) in this sponge. To probe whether isocyanide-isothiocyanate interconversions take place at the secondary metabolite level, the advanced precursor bisisothiocyanate 17 was supplied to A. terpenensis, but did not result in significant labelling in the natural product isocyanide 1. In contrast, in the sponge Axinyssa n.sp., feeding of [(14)C]-9-isocyanopupukeanane (10) resulted in isolation of radiolabelled 9-isothiocyanatopupukeanane 11, while the feeding of [(14)C]-11 resulted in labelled isocyanide 10. These results show conclusively that isocyanides and isothiocyanates are interconverted in the sponge Axinyssa n.sp., and confirm the central role that thiocyanate occupies in the terpene metabolism of this sponge.     

Advanced precursors in marine biosynthetic study. Part 3: The biosynthesis of dichloroimines in the tropical marine sponge Stylotella aurantium

The biosynthetic origins of the dichloroimine group in the stylotellanes A and B 1, 2 have been investigated by incorporation of [¹⁴C]-labeled farnesyl isocyanide 7 and farnesyl isothiocyanate 3 into the sponge Stylotella aurantium.     

Co-occurrence of two terpenoid isocyanide-formamide pairs in a marine sponge (Halichondria sp.)

From a marine sponge (Halichondria sp.) we have isolated amorphane sesquiterpenoids that are substituted at C-10 by isocyanide (1), formamide (2), and isothiocyanate (3), and diterpenoids that are 3,7,11,15- tetramethyl-1,6,10,14-hexadecatetraenes (geranyllinaloyl) bearing isocyanide (13), formamide (14), and isothiocyanate (16) functions at C-3.     

Synthesis of slagenins A, B, and C

[structure: see text] A short synthesis of the marine sponge metabolites slagenins A (1), B (2), and C (3) is described. The synthetic route features the preparation of beta-hydroxyimidazolone 4 from ornithine and its subsequent oxidative cyclization to the slagenin core.     

Toxadocials B, C and toxadocic acid A: thrombin-inhibitory aliphatic tetrasulfates from the marine sponge, toxadocia cylindrica

Three new thrombin-inhibitory metabolites, toxadocial B (2), toxadocial C (3), and toxadocic acid A (4) have been isolated from the marine sponge Toxadocia cylindrica. The structures of these compounds were determined by spectroscopic and chemical methods.     

Verpacamides A-D, a sequence of C11N5 diketopiperazines relating cyclo(Pro-Pro) to cyclo(Pro-Arg), from the marine sponge Axinella vaceleti: possible biogenetic precursors of pyrrole-2-aminoimidazole alkaloids

[reaction: see text] Four C(11)N(5) diketopiperazine metabolites named verpacamides A (6), B (7), C (8), and D (9) consisting of a proline-arginine dipeptide skeleton have been isolated from the marine sponge Axinella vaceleti. Verpacamides A-D are a sequence of metabolites showing the transformation of proline and arginine into the oxidized guanidinyl-cyclo(Pro-Pro) 8 and 9. Compounds 6-9 are structurally and chemically related to C(11)N(5) pyrrole-2-aminoimidazole metabolites also isolated from the Axinellidae and Agelasidae families of sponges and exemplified by dispacamide A (4) and dibromophakellin (10).     

Zur Biosynthese der Rubratoxine

In order to check the hypothesis that rubratoxin B ( 2 ), a C₂₆-metabolite, is formed biogenetically by head-to-tail coupling of two identical C₁₃-precursors derived from decanoic acid and oxaloacetic acid, two labelled forms of the postulated C₁₃-intermediate 2-((E)-1'-octenyl)-3-[¹⁴C]methyl- and 2-((E)-1'-octenyl)-3-[¹³C]-methylmaleic anhydride ( 10 ), were synthesized. The labelled compounds 10 as well as a number of other ¹⁴C]- and [¹³C]-labelled potential precursors were administered to growing cultures of Penicillium rubrum STOLL . Significant incorporation rates of acetate (as intact units) and malonate were observed. Propionate was incorporated after decarboxylation. Succinate exhibited the highest rate of incorporation. The results are in agreement with the assumption that the C₁₀-chain is formed by the fatty acid pathway and the C₃-unit via the tricarboxylic acid cycle. After administration of 10 randomization of the label was observed. Thus the question whether compound 10 is a biogenetic intermediate remains unanswered.     

Studies on the biosynthesis of the notoamides: synthesis of an isotopomer of 6-hydroxydeoxybrevianamide E and biosynthetic incorporation into notoamide J

6-Hydroxydeoxybrevianamide E is proposed as a biosynthetic precursor to several advanced metabolites isolated from both marine-derived Aspergillus sp. and a terrestrial-derived Aspergillus versicolor. To verify the role of this reverse-prenylated indole alkaloid as an intermediate along the biosynthetic pathway, [(13)C](2)-[(15)N]-6-hydroxydeoxybrevianamide E was synthesized and fed to Aspergillus versicolor. Analysis of the metabolites showed incorporation of the intermediate only into the natural product notoamide J.     

On the incorporation of geraniol and farnesol into cantharidin (author's transl)

On the incorporation of geraniol and farnesol into cantharidin Earlier investigations [1] have shown that cantharidin (1) is biosynthesized by the male Lytta vesicatoria L. (Meloidae, Coleoptera) from the common terpenoid precursors mevalonate and farnesol (3) . To prove if geraniol (2) is incorporated via farnesol (3) into cantharidin (1) the following geraniols have been synthesized and injected into either larvae or male adult Lytta vesicatoria, partly in a mixture with synthetic 11′, 12-[³H]-farnesol as an internal standard: 2-[¹⁴C]-, 7-[¹⁴C]-, 7′, 8-[¹⁴C]-, 7′, 8-[³H]-geraniol. Unexpectedly, geraniol (2) was not specifically incorporated into cantharidin (1) perhaps due to its higher toxicity or its faster degradation relative to the other precursors before incorporation. The incorporation of U-[¹⁴C]-leucine, U-[¹⁴C]-isoleucine and 1-[¹⁴C]-glucose into cantharidin (1) via their metabolites is evident by degradation studies, whereas 1-[¹⁴C]- and 2-[¹⁴C]-glycine do not serve as precursors for cantharidin (1) .     

A streamlined approach to the analysis of volatile fatty acids and its application to the measurement of whole-body flux

Volatile fatty acids (VFAs) are produced in the human colon by the bacterial breakdown of carbohydrates that escape digestion and absorption in the small intestine. They have important local and systemic effects on gastrointestinal and nutritional functions. Measuring their production is difficult because of inaccessibility of sampling sites and low circulating concentrations. Stable isotope tracer techniques are a way to measure VFA production but require measurement of isotope dilution in blood and other biological fluids. We have developed a streamlined and robust method to measure the concentration and enrichment of [(2)H]-labelled VFAs by gas chromatography/mass spectrometry (GC/MS) and [(13)C]-labelled VFAs by gas chromatography/combustion/isotope ratio mass spectrometry (GC/C/IRMS). Both types of analysis were carried out on the same samples allowing multiple tracer studies to be conducted. Good accuracy and repeatability were found for GC/MS analysis of [(2)H]-labelled VFAs. Careful handling of the background contribution, especially acetate, allowed quantitation of concentration and enrichment within the analysis. GC/C/IRMS analysis of [(13)C] VFAs was also achieved with good accuracy and repeatability. This methodology was used to determine whole-body acetate production in two subjects using multiple tracers ([(2)H(3)]- and [1-(13)C]acetate) and blood and urine sampling. Whole-body acetate flux was similar when measured either with [(2)H(3)]- or [1-(13)C]acetate, and when flux was determined from plasma or urine tracer enrichment. This new method will permit rapid and accurate measurement of VFA flux using [(2)H]- and/or [(13)C]-labelled VFAs as tracers. Measurements of the contribution of colonic VFA production to whole-body VFA flux are now possible.     

A rapid method for quantitatively estimating metabolites in human plasma in the absence of synthetic standards using a combination of liquid chromatography/mass spectrometry and radiometric detection

An approach to estimating the levels of drug-related metabolites in human plasma in the absence of synthesized chemical standards has been developed. High-performance liquid chromatography/mass spectrometry (LC/MS) in combination with radiometric detection was used in this method. Biologically derived [(14)C] metabolites from preclinical in vitro and in vivo matrices are used as [(14)C] metabolite standards and their concentrations in matrices are calculated based on the corresponding radioactivity. The amount of drug-related metabolites in human plasma samples can be estimated by determining relative MS responses of metabolites between plasma and [(14)C] metabolite standards, and using the calculated concentrations of metabolite standards as calibrants. An example for the estimation of metabolites in human plasma was used to demonstrate the utility of this methodology.     

(-)-Axinyssene: a novel cytotoxic diterpene from a Japanese marine sponge Axinyssa sp

[structure: see text] A novel diterpene, (-)-axinyssene, was isolated from the Japanese marine sponge Axinyssa sp. The structure of (-)-axinyssene was determined on the basis of spectroscopic and synthetic evidence to be 1-methyl-4-[(4E)-5',9'-dimethyl-1'-methylene-4',8'-decadienyl]-(4S)-cyclohexene. (-)- and (+)-axinyssene showed mild cytotoxicity against acute promyelocytic leukemia, HL-60 cells.     

Phorbasins D-F: diterpenyl-taurines from a southern Australian marine sponge, Phorbas sp

Fractionation of an Australian marine sponge, Phorbas sp., yielded the known phorbasins B (1) and C (2) together with three novel diterpenyl-taurines, phorbasins D-F (3-5). Partial absolute structures were assigned on the basis of detailed spectroscopic analysis. Phorbasins D-F (3-5) are the first reported examples of terpenyl-taurines linked via an amine moiety, and phorbasins E and F (4 and 5) incorporate an unprecedented heterocycle. A plausible biosynthetic route is proposed for the incorporation of taurine and heterocycle formation.     

Biocompatible inorganic nanoparticles for [18F]-fluoride binding with applications in PET imaging

A wide selection of insoluble nanoparticulate metal salts was screened for avid binding of [(18)F]-fluoride. Hydroxyapatite and aluminium hydroxide nanoparticles showed particularly avid and stable binding of [(18)F]-fluoride in various biological media. The in vivo behaviour of the [(18)F]-labelled hydroxyapatite and aluminium hydroxide particles was determined by PET-CT imaging in mice. [(18)F]-labelled hydroxyapatite was stable in circulation and when trapped in various tissues (lung embolisation, Subcutaneous and intramuscular), but accumulation in liver via reticuloendothelial clearance was followed by gradual degradation and release of [(18)F]-fluoride (over a period of 4 h) which accumulated in bone. [(18)F]-labelled aluminium hydroxide was also cleared to liver and spleen but degraded slightly even without liver uptake (Subcutaneous and intramuscular). Both materials have properties that are an attractive basis for the design of molecular targeted PET imaging agents labelled with (18)F.     

Spongolactams, farnesyl transferase inhibitors from a marine sponge: isolation through an LC/MS-guided assay, structures, and semisyntheses

Novel nitrogenous diterpenoids, spongolactams A-C (1-3), were isolated as trace components of an Okinawan marine sponge, Spongia sp., by an LC/MS-guided assay for farnesyl transferase (FTase) inhibitors. Their structures were elucidated by spectroscopic analyses. To evaluate their structures and biological activity, the metabolites were semisynthesized from the known furanoditerpene 5, obtained from the same sponge. Three related compounds 4, 13, and 16 were also semisynthesized. The IC50 values against FTase for 1-3 were 23, 130, and >260 microM, respectively, while the IC50 values against a human tumor cell line were 2.0, 3.5, and 20 microM, respectively. The structure-activity relationships within the six compounds suggest some positive correlation between FTase inhibitory and cytotoxic activities.     

Photochemical synthesis of intensely luminescent isocyano rhenium(I) complexes with readily tunable structural features

A new class of readily tunable isocyano rhenium(I) diimine luminophores, cis,cis-[Re(CO)(2)(CNR)(2)(N-N)](+) (R=2,4,6-Cl(3)C(6)H(2), 4-ClC(6)H(4), 4-Br-2,6-(CH(3))(2)C(6)H(2), 2,6-(CH(3))(2)C(6)H(3), 4-[(CH(3))(2)N]C(6)H(4), 4-(C(6)H(5))C(6)H(4), 4-nBuC(6)H(4), tBu), has been synthesized in high yield by a highly selective photochemical substitution reaction. These complexes were characterized by (1)H NMR and IR spectroscopy, mass spectrometry, and elemental analysis. The X-ray crystal structures of one of the complexes and one of the precursor complexes for the photosubstitution reaction were also determined. As the isocyanide ligands are readily tunable, complexes with excellent solubility in benzene or other nonpolar solvents could be designed through slight modification of the isocyanide ligands with a short nBu substituent. With the characteristic strong infrared absorptions of the carbonyl (C≡O) and isocyanide (C≡N) stretches as well as the high solubility of the reactant and product in benzene, which is the solvent for the photoreaction, the photosubstitution reaction of [Re(CO)(3)(nBuC(6)H(4)NC)(2)Br] with 4,4'-di-tert-butyl-2,2'-bipyridine was also studied by in situ IR spectroscopy. The photophysical and electrochemical properties of these complexes were also investigated. Except for the complex with [(CH(3))(2)N]C(6)H(4)NC ligands, all complexes displayed intense luminescence with quantum yields of up to 0.37 in degassed CH(2)Cl(2) solution at room temperature. These emissions were assigned as the phosphorescence derived from the metal-to-ligand charge transfer [dπ(Re)→π*(N-N)] excited state. The emissive excited states of these complexes have also been characterized by transient absorption spectroscopic studies. The capability of tuning the emissive excited-state energy through the modification of the isocyanide ligands could be reflected by the significant shifting of the phosphorescence from 530 to 620 nm with the same phenanthroline ligand.     

One-step synthesis of substituted 4,7-bis[alkyl(aryl)imino]-3-oxa-6-thia-1-azaspiro[4.4]nona-1,8-dienes

Alkyl-(aryl) isocyanides react with benzoyl isothiocyanate in the presence of dialkyl acetylenedicarboxylates or dibenzoylacetylene in one-pot to afford highly substituted 4,7-bis[alkyl(aryl)imino]-2-phenyl-3-oxa-6-thia-1-azaspiro[4.4]nona-1,8-dienes, with double insertion of the isocyanide, in 38-45% yields (based on the isocyanide).     

(+)-Echinobetaine B: isolation, structure elucidation, synthesis and preliminary SAR studies on a new nematocidal betaine from a southern Australian marine sponge, Echinodictyum sp

The principle nematocidal agent present in a southern Australian marine sponge of the genus Echinodictyum has been isolated and identified as the novel betaine (+)-echinobetaine B (6), and the structure assigned by spectroscopic analysis has been confirmed by total synthesis. Preliminary SAR conclusions are drawn from analysis of synthetic intermediates and the known marine metabolites zooanemonin (12) and norzooanemonin (13), and the new sponge metabolite norzooanemonin methyl ester (14). The latter compound is reported for the first time from a selection of Australian sponges, including an Axinyssa sp., a Niphates sp., an Axinella sp. and a Ptilocaulis sp.     

Copper(I) complexes of fluorinated triazapentadienyl ligands: synthesis and characterization of [N[(C3F7)C(Dipp)N]2]CuL (where L = NCCH3, CNBut, CO; Dipp = 2,6-diisopropylphenyl)

Sterically demanding triazapentadiene [N[(C3F7)C(Dipp)N]2] H has been synthesized in good yield. It features a W-shaped ligand backbone in the solid state. [N[(C3F7)C(Dipp)N]2]H reacts with copper(I) oxide in acetonitrile leading to [N[(C3F7)C(Dipp)N]2]CuNCCH3. This copper adduct serves as an excellent precursor to obtain thermally stable [N[(C3F7)C(Dipp)N]2]CuCNBut and [N[(C3F7)C(Dipp)N]2]CuCO. IR spectroscopic data of these copper(I) isocyanide (CN = 2176 cm(-1)) and copper(I) carbonyl (CO = 2109 cm(-1)) complexes indicate that the [N[(C3F7)C(Dipp)N]2]- ligand is a fairly weak donor.     

Remarkable incorporation of the first sulfur containing indole derivative: another piece in the biosynthetic puzzle of crucifer phytoalexins

The first sulfur labelled compound, [(2)H(4),(34)S]indolyl-3-acetothiohydroxamic acid, is incorporated into the phytoalexins cyclobrassinin and spirobrassinin and the indole glucosinolate glucobrassicin, indicating that both biosynthetic pathways are closely related.