Profiling recombinant major birch pollen allergen Bet v 1a and carbamylated variants with CZE and CIEF

A preparation of recombinant birch pollen allergen of Betula verrucosa isoform 1a (Bet v 1a) containing chemically modified (carbamylated) variants has been analyzed by CZE and CIEF. In CZE, employing a 100 mmol/L MES buffer at pH 6.50, with 0.4 mmol/L tetraethylenepentamine (TEPA) added, allowed for the resolution of 17 protein fractions. The CIEF profiling of the allergen preparation required a combination of a wide-pH-range carrier ampholyte (CA) of pH 3-10 with two narrow-range CAs of pH 5-6 and 5-7. For CIEF, 91 mmol/L of glycine at pH 2.12 and 20 mmol/L of CHES at pH 10.00 were applied as anolyte and catholyte, respectively. The generated pH gradient was nonlinear with a flat slope for pH 4-6, thus providing an improved resolution. In CIEF, up to 18 protein fractions were distinguished as well. The pI of the target allergen Bet v 1a was 4.9 as determined by means of two pI marker compounds flanking the allergen. Relative purity of the target allergen within the preparation containing carbamylated variants was in accordance for both separation systems and varied between 40.7 and 42.8%.     

Validation of capillary zone electrophoresis and capillary isoelectric focusing separations optimized for the characterization of two recombinant products of the birch pollen allergen Bet v 1a

CZE and CIEF separation systems, both developed previously for a quality control of two recombinant products of the major birch pollen allergen Bet v 1a of Betula verrucosa, were validated including aspects of the International Conference on Harmonization. One product contained carbamylated variants as impurities. Linearity of response was confirmed by Mandel's fitting test between 0.028 and 1.90 mg/mL for CZE and between 0.016 and 0.26 mg/mL for CIEF. Repeatability and intermediate precision were evaluated for the effective mobility (mu(eff)) in CZE, for relative mobilization time in CIEF and the peak area ratio of Bet v 1a. LOQ for Bet v 1a was between 10 and 23 microg/mL for both methods. Evaluation of robustness for CZE revealed susceptibility of micro(eff) of Bet v 1a to alterations in of buffer pH and separation temperature. Selectivity was impaired by an increase in temperature, pH, and buffer concentration. In addition, pH variations influenced the separation profile of impurities. For CIEF, the ratio of narrow pH range carrier ampholytes is the critical parameter to retain robustness. Results demonstrate the suitability of both separation systems to discriminate between nonmodified Bet v 1a and carbamylated variants in the selected recombinant allergen products.     

Synthetic protocols for the nitration of corroles

The modification of peripheral positions of corroles by introduction of nitro groups is an important functionalization of this macrocycle. The nitro substituent strongly influences the corrole behavior leading to the preparation of macrocycles with different properties, which can be of interest for their exploitation as catalysts, sensing layers in chemical sensors or in the field of supramolecular chemistry. In the last few years we have developed different routes for the β-nitration of the corrole ring, and we report here novel synthetic protocols which can allow the formation of tri- and tetranitro derivatives, as demonstrated by X-ray analysis. In all of the methodologies used, the presence of isocorrole species as reaction intermediates was established, which regenerated the corresponding corrole by metal insertion.     

Purification of a basic glycoprotein allergen from pollen of timothy by high-performance liquid chromatography

The use of high-performance ion-exchange and size-exclusion chromatography in the purification of the basic timothy pollen allergen antigen 30 (Ag 30) was investigated. The most efficient purification was achieved when an initial purification step on a CM-Sepharose CL-6B column was followed by chromatography on Mono S and TSK G 2000 SW columns. This procedure was highly reproducible and well suited for semi-preparative scale purification of the allergen. The purified allergen gave one band on isoelectric focusing, corresponding to a pI of 9.30. On fused rocket immunoelectrophoresis a single precipitate was obtained that coincided with the allergenic activity.     

A method for nitration of thiazoles

Nitrations of some sensitive thiazole derivatives with trifluoromethanesulfonic acid-trifluoro-methanesulfonic anhydride.-potassium nitrate in 1,2-dichloroethane gave significantly higher yields of the nitro compounds in comparison with nitrations in sulfuric acid-nitric acid mixtures.     

Identification of tyrosine nitration in UCH-L1 and GAPDH

Protein tyrosine nitration is a post-translational modification commonly used as a marker of cellular oxidative stress associated with numerous pathophysiological conditions. We focused on ubiquitin carboxyl terminal hydrolase-L1 (UCH-L1) and glyceraldehyde-3-phosphate (GAPDH) which are high-abundant brain proteins that have been identified to be highly susceptible to oxidative modification. Both UCH-L1 and GAPDH have been linked to the pathogenesis of Alzheimer's and Parkinson's disease, however specific nitration sites have not been elucidated. Identification of specific nitration sites and quantitation of endogenous nitrated proteins are important in correlating this modification to disease pathology. In this study, purified UCH-L1 and GAPDH were nitrated in vitro with peroxynitrite and the presence of nitrated proteins was confirmed by anti-3-nitrotyrosine Western blots. Data-dependent LC-MS/MS analysis identified several distinct tyrosine nitration sites in UCH-L1 (Tyr-80) and GAPDH (Tyr-47, Tyr-92, and Tyr-312). Subsequent validation with synthetic peptides was conducted for selected nitropeptides. An LC-MS/MS method was developed for semi-quantitative determination of the synthetic nitropeptides: KGQEVSPKVY(*) (UCH-L1) and mFQY(*) DSTHGKF (GAPDH). The nitropeptides were detectable in the mid-attomole range and the peak area response was linear over three orders of magnitude. Targeted analysis of endogenous UCH-L1 and GAPDH nitration was then conducted in an in vivo second-hand smoke rat model to evaluate the utility of this approach.     

A color version of the Hinsberg test: 1 degrees -3 degrees amine indicator

The Hinsberg test to recognize the type of amine (1 degrees -3 degrees amines), which has been established for more than 100 years and well documented in textbooks, is not possible without conducting complicated organic reactions. We report for the first time unique chemosensors that are capable of showing selective color changes toward 1 degrees -3 degrees amines as a color version of the Hinsberg test. This simple and straightforward qualitative analysis, using the synthesized novel compounds herein, can be considered a new innovative tool for discriminating 1 degrees -3 degrees amines as an alternative to the historical Hinsberg test.     

Sesquiterpenes from the inner bark of the silver birch and the paper birch

The compositions of the mixtures of sesquiterpenoids, largely hydrocarbons that were found in the inner bark of the silver birch, Betula pendula Roth and the paper birch, Betulapapyrifera Marshall, grown in New Zealand were analyzed by SPME-GCMS. The major components of the volatile oil from the inner bark of B. pendula were trans alpha-bergamotene (31%) and alpha-santalene (19%). This composition was quite different from that of the oil from the branches, buds and leaves of the same species from Turkey, but was very similar to that of the oil from the bark of B. pubescens from Russia. The major components of the oil from the inner bark of B. papyrifera were trans alpha-bergamotene (18%), ar-curcumene (12%), E-beta-farnesene (12%), Z-beta-farnesene (10%) and cis-alpha-bergamotene (8%).     

Imaging the mode-selected predissociation of OCS+[(v1v2v3)B2 Sigma+

A new experimental approach to explore the mode-selected chemistry is proposed and demonstrated here. In this approach a double-resonance excitation scheme is exploited to prepare a well-defined mode or state of a parent ion. A time-sliced velocity imaging technique interrogates the fragment ion from the subsequent predissociation. Application to the title process reveals remarkable mode-specific behaviors despite the long dissociation time associated with the indirect bond-breaking process. A qualitative interpretation of the major findings is surmised.     

Radiative lifetime for v = 1 and v = 2 ground state NO+ ions

Radiative lifetimes of vibrationally excited ions in their electronic ground state have been measured for the first time. A nonoptical technique has been developed, involving ion cyclotron resonance trapping in conjunction with chemical monitoring of the energy content of the ions. For NO⁺(X ¹Σ⁺) ions, the measured lifetimes of 95 ± 15 ms for v = 1 and 46 ± 10 ms for v = 2 are in excellent agreement with the values obtained from the ab initio calculations of Werner and Rosmus.     

On the nitration of 2-pyrone

A 1:1 adducl of 2-pyrone and nitronium fluoroborate has been delected by nmr and is a possible precursor of 5-nitro-2-pyrone, a subsequently formed product. From comparison of the nmr spectra of the 1:1 adduct and 2-methoxypyrylium fluoroborate, the adduct is believed to be the pyrylium fluoroborate derived from nitration of the carbonyl oxygen of 2-pyrone.     

Sensitive and selective magnetoimmunosensing platform for determination of the food allergen Ara h 1

A highly sensitive disposable amperometric immunosensor based on the use of magnetic beads (MBs) is described for determination of Ara h 1, the major peanut allergen, in only 2 h. The approach uses a sandwich configuration involving selective capture and biotinylated detector antibodies and carboxylic acid-modified MBs (HOOC-MBs). The MBs bearing the immunoconjugates are captured by a magnet placed under the surface of a disposable screen-printed carbon electrode (SPCE) and the affinity reactions are monitored amperometrically at −0.20 V (vs a Ag pseudo-reference electrode) in the presence of hydroquinone (HQ) as electron transfer mediator and upon addition of H₂O₂ as the enzyme substrate. The developed immunosensor exhibits a wide range of linearity between 20.8 and 1000.0 ng mL⁻¹ Ara h 1, a detection limit of 6.3 ng mL⁻¹, a great selectivity, a good reproducibility with a RSD of 6.3% for six different immunosensors and a useful lifetime of 25 days. The usefulness of the immunosensor was demonstrated by determining Ara h 1 in different matrices (food extracts and saliva). The results correlated properly with those provided by a commercial ELISA method offering a reliable and promising analytical screening tool in the development of user-friendly devices for on-site determination of Ara h 1.     

Regioselectivity in the nitration of dialkoxybenzenes

Dinitrodialkoxybenzene derivatives are important precursors for Schiff base macrocycles and a variety of other molecules. During our investigations, we have found that the dinitration reaction of 1,2-dialkoxybenzenes proceeds with unusual regioselectivity, giving exclusively the desired 1,2-dialkoxy-4,5-dinitrobenzene product, but we have been unable to find a good explanation for this result. The dinitration of 1,4-dialkoxybenzene derivatives also exhibits surprising regioselectivity that has hitherto been left unexplained. Herein, we report a detailed DFT analysis of the regioselective dinitration of both 1,2- and 1,4-dimethoxybenzene. These results show that the reaction mechanism likely involves a single electron transfer (SET) process. In the case of the former isomer, the regioselectivity is mainly determined by the symmetry of the HOMO of the aromatic moiety that defines the structure of the SHOMO of the aromatic radical cation formed by the SET process. In the case of the latter isomer, the selectivity is due mainly to solvation effects and may thus be altered depending on the solvent environment. Synthetic studies of the nitration of 1,4-dialkoxybenzene derivatives using different solvent conditions support this conclusion and provide practical information for tuning the regioselectivity of the reaction.     

The nitration of some 1-aryl(or benzyl)pyrroles

Nitration of 1-arylpyrroles 1a-c with acetyl nitrate, and 1-arylpyrroles, 1a-e and 1-(2-ethoxycarbonylbenzyl)pyrrole 4 with trifluoroacetyl nitrate gave the corresponding 2-nitro isomers 2a-e and 5, and 3-nitro isomers 3a-e and 6 . 3-Nitropyrroles 3d and 3e were further nitrated with a mixture of nitric and sulfuric acids to give compounds 10, 11 and 12 , respectively. Under the same conditions 1-(2-ethoxycarbonylbenzyl)-3-nitropyrrole 6 gave derivative 13 .