Characterisation of the approach to equilibrium of the osazone of dihydroxytartaric acid in aqueous solutions by differential pulse polarography

Differential pulse polarography is used to determine the changes in the enthalpy, entropy and Gibbs function for the forward and reverse conversions of the osazone of dihydroxytartaric acid from one tautomeric form to another at pH 11.4 in aqueous solution. This is done by determining the individual rate constants associated with these conversions at different temperatures through combining kinetic measurements with measurements on the system at equilibrium. The equilibrium constant was found to vary widely with pH and to increase with increase in temperature. The driving force for the endothermic conversion of the osazone from the hydrazone form to the azohydrazine form is shown to be the much greater freedom of movement (greater entropy) available to the latter form.     

DFT studies on the favored and rare tautomers of neutral and redox cytosine

The complete tautomeric mixture consisting of nine prototropic tautomers has been studied in the gas phase at the DFT(B3LYP)/6-311+G(d,p) level for neutral, oxidized, and reduced cytosine. Rotational isomerism of the exo –OH group and geometrical isomerism of the exo =NH group have also been considered. Tautomeric conversions possible for cytosine have been compared with those for its structural models, 4-amino- and 2-hydroxypyrimidine. Effects of intramolecular interactions between neighboring groups for cytosine are analogous to those observed for model compounds. Although they are not very strong, they are sufficient to influence tautomeric equilibria and relative stabilities of individual tautomers. One-electron oxidation and one-electron reduction change tautomeric preferences. Tautomers that are rare forms for neutral cytosine become favored ones for oxidized and reduced cytosine. Aromaticity is not the main factor that dictates the tautomeric preferences. Stability of functional groups seems to be more important than full electron delocalization.     

Spectrometric and Voltammetric Characterization of Obidoxime in Aqueous Solutions

Obidoxime is a pharmacologically active compound used as an acetylcholinesterase reactivator. The scope of this study was to establish correlations between its acid–base and redox equilibria and its mechanism as an acetylcholinesterase reactivator. The obidoxime dicationic structure is modified by the pH of the solvating medium due to tautomeric isomerizations. The possibility of stabilizing its structure as a dicationic, monocationic, and a neutral species was studied by ultraviolet–visible spectrometry and cyclic and differential pulse voltammetry. Spectrometric and voltammetric studies were performed across a large pH interval (2.00–9.80) of the solvating medium. Absorption measurements revealed the existence of three species involved in two tautomeric equilibria implying oxime and nitroso groups. The structure bearing nitroso groups, stabilized at higher pH, is more likely to behave as a nucleophilic agent than the structure with oxime groups, explaining thus its acetylcholinesterase reactivation. The obidoxime voltammetric behavior at a glassy carbon electrode is complex. Both its oxidation and reduction are diffusion-controlled processes. Anodic signals were obtained only at pH values above 6.50 and the oxidation occurs at the anion oxime group involving two electrons and one proton. The obidoxime reduction is pH dependent only for neutral or alkaline media, giving rise to two or even four signals (for pH higher than 7.50) depending on pH. The peak at less positive potentials was always well defined.     

Unprecedented Role of Hydronaphthoquinone Tautomers in Biosynthesis

Quinones and hydroquinones are among the most common cellular cofactors, redox mediators, and natural products. Here, we report on the reduction of 2‐hydroxynaphthoquinones to the stable 1,4‐diketo tautomeric form of hydronaphthoquinones and their further reduction by fungal tetrahydroxynaphthalene reductase. The very high diastereomeric and enantiomeric excess, together with the high yield of cis‐3,4‐dihydroxy‐1‐tetralone, exclude an intermediary hydronaphthoquinone. Labeling experiments with NADPH and NADPD corroborated the formation of an unexpected 1,4‐diketo tautomeric form of 2‐hydroxyhydronaphthoquinone as a stable intermediate. Similar 1,4‐diketo tautomers of hydronaphthoquinones were established as products of the NADPH‐dependent enzymatic reduction of other 1,4‐naphthoquinones, and as substrates for different members of the superfamily of short‐chain dehydrogenases. We propose an essential role of hydroquinone diketo tautomers in biosynthesis and detoxification processes.     

别嘌醇质子迁移过程的理论研究

别嘌醇(Allopurinol)是次黄嘌呤的位置异构体,是唯一在临床上应用的黄嘌呤氧化酶抑制剂.     

喹唑啉酮互变异构的理论计算

采用密度泛函理论B3LYP/6-311+G(d,p)方法,计算并考察了喹唑啉酮进行结构互变的质子迁移过程的两种可能途径:(a)分子内质子迁移,(b)水助质子迁移.结果表明,途经b所需要的能垒小,氢键在降低反应能垒方面起重要作用.     

Absolute configurations, predominant conformations, and tautomeric structures of enantiomeric tert-butylphenylphosphinothioic acid.

Vibrational absorption and circular dichroism spectra of dextrorotatory, levorotatory, and racemic mixture of tert-butylphenylphosphinothioic acid have been measured in CCl(4) solutions in the 2000-900 cm(-1) region. The conformations for both tautomeric structures of (S)-tert-butylphenylphosphinothioic acid are investigated using the B3LYP functional with the 6-31G* basis set. For the most stable conformation, the absorption and VCD spectra are predicted ab initio using the B3LYP functional with 6-31G*, 6-311G(2d, 2p), 6-31+G, and 6-311G(3df, 3pd) basis sets. A different functional, B3PW91, was also used with the 6-31G* basis set. The predicted spectra are compared to the experimental spectra. The comparison indicates that (-)-tert-butylphenylphosphinothioic acid is of the (S)-configuration and exists in only one tautomeric structure and one conformation in CCl(4) solution.     

Triple hydrogen bonding in a circular arrangement: ab initio, DFT and first-principles MD studies of tris-hydroxyaryl enamines

First-principles Car-Parrinello molecular dynamics, ab initio (MP2) and density functional schemes have been used to explore the tautomeric equilibrium in three tris(amino(R)methylidene)cyclohexane-1,3,5-triones (R?=?hydrogen, methyl or phenyl group). The dynamic nature of the cyclic hydrogen bonding has been studied by the first-principles MD method. The comparison of the results obtained by aforesaid methods has been accomplished on the basis of calculations of structural and spectroscopic characteristics of the compounds. The conformational analysis of the studied compounds has been carried out at the MP2/6-31+G(d,p) and B3LYP/6-31+G(d,p) levels of theory. The influence of steric and electronic effects on the cyclic hydrogen bonding has been analysed. The extent of the proton delocalization has been modified by the substituents according to the sequence: hydrogen?<?phenyl?<?methyl. This fact is verified by the spectroscopic and structural data as well as the energy potential curve. A prevalence of the keto-enamine tautomeric form has been observed in the static ab initio and DFT models, and confirmed by the first-principles MD.     

Quantum chemical study of the adducts of azomethine cobalt complexes with acenaphthene-1,2-diimines

Adducts based on the cobalt azomethine bis-chelates and acenaphthene-1,2-diimines have been studied using the density functional theory method [DFT B3LYP*/6-311++G(d,p)]. It has been shown that the stability of the formed complexes with respect to dissociation and the ability to demonstrate valence tautomeric properties can be controlled by functionalization of the ligands. Compounds have been revealed whose magnetic properties vary due to intramolecular redox process.     

3-卤代吡唑质子转移过程的理论研究

采用密度泛函B3LYP/6-311G**方法,对3-卤(-F、-Cl、-Br)代吡唑几何构型进行了全自由度优化,获得了它们的几何结构和电子结构。计算结果显示,N1-H型的稳定性大于N2-H型。计算并考察了3-卤代吡唑进行结构互变的质子转移过程的四种可能途径:(a)分子内质子转移;(b)水助质子转移;(c)同种二聚体双质子转移;(d)异种二聚体双质子转移。计算结果表明(以3-氟代吡唑为例),途径d所需要的活化能最小(54.89 kJ/mol),而途径a所需要的活化能最大(198.83kJ/mol),途径b和c的活化能居中间分别为(104.05 kJ/mol和69.05 kJ/mol)。研究还表明氢键在降低活化能方面起着重要的作用,卤素(-F、-Cl、-Br)对活化能的影响不大。     

Intramolecular hydrogen bond in the push–pull CF3-aminoenones: DFT and FTIR study,NBO analysis

Postulated conformers of trifluoromethylated β-aminoenones stabilized by intramolecular NH?O and N?HO bonds were studied by IR and NMR spectroscopy and evaluated with quantum chemical calculations (B3LYP/6-311+G(d,p), MP2/6-311+G(d,p)//B3LYP/6-311+G(d,p) and MP2/6-31G(d,p)) and NBO analysis. The influence of the nature of EWG, substituents at the nitrogen atom and double bond, and of orbital interactions of heteroatoms and double bonds in these structures on the proton affinity of basic and acid centers, strength of hydrogen bonds, and the energy of tautomeric transfers is discussed. The theoretical results agree satisfactorily with the experimental observations.     

A study of the interaction between the osazone of dihydroxytartaric acid and calcium ions in alkaline solution using differential pulse polarography

Differential pulse polarography on osazone solutions of pH 11.4 to which excess calcium ions had been added has shown that, at low ionic strengths (I = 0.03 M), a 1:1 neutral complex forms between the osazone and calcium ions. A possible structure for the complex has been proposed.     

2-羟基吡啶质子转移过程的理论研究

采用量子化学中的密度泛函理论,在B3LYP/6-31G(d)基组水平上,计算并考察了2-羟基吡啶分子醇式结构和酮式结构进行结构互变的质子转移过程中的4种可能途径:(a)分子内质子转移,(b)水助催化质子转移,(c)同种二聚体双质子转移和(d)异种二聚体间双质子转移.计算结果表明,途经c所需要的活化能最小(2.6 kJ•mol－1,逆反应则为27.1 kJ•mol－1),而过程a所需要的活化能最大(137.2 kJ•mol－1),途径b和d的活化能居中间(分别为38.7和17.3 kJ•mol－1).研究还表明,氢键在降低反应活化能方面起着重要的作用.     

Photochemistry of 5-allyloxy-tetrazoles: steady-state and laser flash photolysis study

The photochemistry of three 5-allyloxy-tetrazoles, in methanol, acetonitrile and cyclohexane was studied by product analysis and laser flash photolysis. The exclusive primary photochemical process identified was molecular nitrogen elimination, with formation of 1,3-oxazines. These compounds were isolated in reasonable yields by column chromatography on silica gel and were fully characterized. DFT(B3LYP)/6-31G(d,p) calculations predict that these 1,3-oxazines can adopt two tautomeric forms (i) with the NH group acting as a bridge connecting the oxazine and phenyl rings and (ii) with the -N=bridge and the proton shifted to the oxazine ring. Both tautomeric forms are relevant in the photolysis of oxazines in solution. Secondary reactions were observed, leading to the production of phenyl vinyl-hydrazines, enamines, aniline and phenyl-isocyanate. Transient absorption, detected by laser flash photolysis, is attributed to the formation of triplet 1,3-biradicals generated from the excited 5-allyloxy-tetrazoles. The 1,3-biradicals are converted to 1,6-biradicals by proton transfer, which, after intersystem crossing, decay to generate the products. Solvent effects on the photoproduct distribution and rate of decomposition are negligible.     

Infrared and Raman spectra,DFT investigation of the tautomerism,conformational equilibrium,structure and vibrational assignment of 1-(2-benzothiazolyl)-3-methyl pyrazol-5-one

The low energy conformations of the three tautomers, imine-enol, enamine-keto and imine-keto forms of the title compound have been determined at the B3LYP/6-31 + G(d) level of theory using the relaxed PES scan method and their geometries have been refined at B3LYP/6-311 + G(d,p) and PBE0/6-311 + G(d,p) levels. The results show that the title compound exists in the imine-enol tautomeric form, in contrast to the enamine-keto form which exists in the solid crystalline state, followed by enamine-keto and imine-keto forms with extremely low abundances. The geometry parameters of all tautomeric forms calculated at PBE0/6-311 + G(d,p) and B3LYP/6-311 + G(d,p) levels have been compared with those from the experimental X-ray diffraction. The vibrational (FT-IR and Raman) spectroscopic studies of the most stable tautomer, enamine-keto form have been carried out. The assignment of the fundamental bands observed in the IR and Raman spectra have been facilitated by the SQM force field procedure. The frequencies from SQM procedure have a very good fit to the experimental ones. The total root-mean-square error is only ca. 11 cm⁻¹.     

Tautomeric equilibria of 5-fluorouracil anionic species in water

It has long been postulated that rare tautomeric or ionized forms of nucleic acid bases may play a role in mispair formation. Therefore, ab initio quantum chemical investigations on the tautomeric equilibrium in 5-fluorouracil (5FU) and its anions (deprotonated from N1, AN1, and from N3, AN3) and their tautomeric forms in water were performed. The effect of the water as solvent was introduced using solute-solvent clusters (four water molecules). The influence of the water molecules on the tautomeric reactions between different forms was considered by multiple proton transfer mechanisms. We show that when a water dimer is located in the reaction site between the two pairs of N-H and C═O groups, the assistive effect of the water molecules is strengthened. All calculations of the solute-water complexes were carried out at an MP2 level of theory and supplemented with correction for higher order correlation terms at CCSD(T) level, using the 6-31+G(d,p) basis set. The ab initio calculated frequencies and Raman intensities of 5FU and its anions AN1, AN3, and dianion are in good agreement with the experimental Raman frequencies in aqueous solution at different pH. In order to establish the pH-induced structural transformation in the molecule of 5FU, further (1)H, (19)F, and (13)C NMR spectra in water solution for pH = 6.9-13.8 were acquired and the chemical shift alterations were determined as a function of pH. On the basis of NMR spectroscopic data obtained for 5FU in aqueous solution at alkaline pH, we suggest the existence of a mixture of the anionic tautomeric forms predicted by our theoretical calculations.     

Nature of cationic poly(propylenimine) dendrimers in aqueous solutions as studied using versatile indicator dyes

Aqueous solutions of four cationic poly(propylenimine) low-generation dendrimers of different architecture and hydrophobicity have been examined as media for acid-base reactions of indicator dyes. The cationic dendrimers in solution can be considered as oligomers of cationic polyelectrolytes, or surfactant-like species, able to form micelles through self-association or sometimes even as unimolecular micelles. The dendrimers influence the ionization constants, tautomeric equilibria, and absorption/emission/excitation spectra of indicator dyes. The p K a values of the majority of the indicator dyes decrease in dendrimer solutions, often by 1-2 p K a units, similar to effects registered in micellar solutions of cationic surfactants. Analogously, the shifts of absorption band maxima indicate that the microenvironments of the dyes bound to the dendrimers are less polar than in water. However, some spectral effects denote the specificity of the dendrimers. The greatest difference between the dendrimers and spherical surfactant micelles is revealed by kinetic processes, especially of bromophenol blue alkaline fading in a dendrimer solution but not in a micellar surfactant solution. Within the dendrimer series, the most significant differences were observed for substances possessing n-dodecyl tails on the one hand and those without such hydrophobic portions on the other. For the last-named, the decrease in p K a's of indicators, band shifts of their anions, and in particular displacement of tautomeric equilibria compared with aqueous solutions are much smaller than for more hydrophobic dendrimers.     

Molecular dynamics study of the tautomeric equilibrium in the 4-nitro- and 2,4,6-trichloro derivatives of 2-(N,N-dialkyloaminomethyl)phenol

 Molecular dynamics thermodynamic integration (MDTI) method and quantum chemical calculations at the density functional theory B3LYP 6-31+(d,p) level, which included the Tomasi model of the solvent reaction field, were applied to study the tautomeric equilibrium of Mannich base in methanol solution. The values obtained for the free-energy difference are in good agreement with experimental data. However, the results from quantum mechanical calculations were not as good as the results of MDTI simulations owing to inappropriate treatment of intermolecular hydrogen bonds between the solute molecule and the first shell of solvent molecules in the Tomasi model of the solvent reaction field. The radial distribution functions between solute atoms and solvent atoms confirmed the formation of hydrogen bonds between the solute molecule and surrounding methanol molecules and indicated that the zwitterionic form is associated more with an organized solvent structure at the level of the first solvation shell than is the molecular form. Received: 26 April 2002 / Accepted: 9 September 2002 / Published online: 31 March 2003     

Theoretical and experimental study of triphenylphosphonium Schiff base of 5-hydroxy-3-methyl-1-phenyl-4-formylpyrazole

The Schiff base (HLBr), containing a chelating unit and triphenylphosphonium moiety has been synthesized in the reaction of 4-aminobenzyl(triphenyl)phosphonium bromide with 5-hydroxy-3-methyl-1-phenyl-4-formylpyrazole. The composition and structure of HLBr have been determined by elemental analysis, IR, 1D and 2D NMR, electronic spectroscopy and mass spectrometry. Density functional theory (DFT) calculations (6-311G(d,p) level of theory) have been carried out to investigate tautomeric forms of HL⁺ and the reaction mechanism of its formation and spectral properties. The most stable form in the solid state and in DMSO solution is pyrazolone (keto-amine) tautomeric form.