Synthesis, solution behavior, thermal stability, and biological activity of an Fe(III) complex of an artificial siderophore with intramolecular hydrogen bonding networks

Previously, an artificial siderophore complex, the iron(III) complex with tris[2-[(N-acetyl-N-hydroxy)glycylamino]ethyl]amine (TAGE), was constructed in order to understand the effect of intramolecular hydrogen bonding interaction on the siderophore function, and its structural characterization in the solid state was reported (Inorg. Chem. 2001, 40, 190). In this paper, the solution behavior of the M(III)-TAGE (M = Fe, Ga) system has been investigated using (1)H NMR, UV-vis, and FAB mass spectroscopies in efforts to characterize the biological implication of hydrogen bonding networks between the amide hydrogens and coordinating aminohydroxy oxygens of the complex. The temperature dependence of (1)H NMR spectra for Ga(III) complex of TAGE indicates that hydrogen bonding networks are maintained in polar solvents such as DMSO-d(6) and D(2)O. The UV-vis spectra of the Fe(III)-TAGE system under various pH conditions have shown that TAGE forms a tris(hydroxamato)iron(III) complex in an aqueous solution in the pH range 4-8. By contrast, tris[2-[(N-acetyl-N-hydroxy)propylamido]ethyl]amine (TAPE; TAGE analogue that is difficult to form intramolecular hydrogen bonding networks), which has been synthesized as a comparison of TAGE, forms both of bis- and tris(hydroxamato)iron(III) complexes in the same pH range. Both the stability constants (log beta(FeTAGE) = 28.6; beta(FeTAGE) = [Fe(III)TAGE]/([Fe(3+)][TAGE(3)(-)])) and pM (-log[Fe(3+)]) value for Fe(III)TAGE (pM 25) are comparable to those of a natural siderophore ferrichrome (log beta = 29.1 and pM 25.2). The kinetic study of the TAGE-Fe(III) system has given the following rate constants: the rate of the ligand exchange reaction between Fe(III)TAGE and EDTA is 6.7 x 10(-4) s(-1), and the removal rates of iron from diferric bovine plasma transferrin by TAGE are 2.8 x 10(-2) and 6.0 x 10(-3) min(-1). These values are also comparable to those of a natural siderophore desferrioxamine B under the same conditions. In a biological activity experiment, TAGE has promoted the growth of the siderophore-auxotroph Gram-positive bacterium Microbacterium flavescens, suggesting that TAGE mimics the activity of ferrichrome. These results indicate that the artificial siderophore with intramolecular hydrogen bonding networks, TAGE, is a good structural and functional model for a natural ferrichrome.     

Yttrium(III) complex with 1,10-phenanthroline: Crystal structure and spectroscopic studies

YCl₃·6H₂O reacts with 1,10-phenanthroline (phen) to yield a complex of 1:2 yttrium:ligand stoichiometry. The yttrium(III) complex is characterized by the elemental analysis, UV-Vis, IR as well as the X-ray diffraction analysis. The crystal of [Y(phen)₂Cl(H₂O)₃]Cl₂·H₂O obtained from a methanol solution crystallizes in the triclinic system, space group P 337-1, Z = 2, a = 10.3236(4) Å, b = 10.4566(4) Å, c = 12.5270(5) Å, α = 97.354(2)°, β = 108.740(2)°, γ = 93.458(2)°, R _int = 0.046. The Y(III) ion is eight-coordinated by four nitrogen, three oxygen atoms and one chlorine atom.     

Statistical theory for hydrogen bonding fluid system of A_aD_d type(II):Properties of hydrogen bonding networks

Making use of the invariant property of the equilibrium size distribution of the hydrogen bonding clus- ters formed in hydrogen bonding system of AaDd type,the analytical expressions of the free energy in pregel and postgel regimes are obtained.Then the gel free energy and the scaling behavior of the number of hydrogen bonds in gel phase near the critical point are investigated to give the corre- sponding scaling exponents and scaling law.Meanwhile,some properties of intermolecular and in- tramolecular hydrogen bonds in the system,sol and gel phases are discussed.As a result,the explicit relationship between the number of intramolecular hydrogen bonds and hydrogen bonding degree is obtained.     

Statistical theory for hydrogen bonding fluid system of AaDd type (Ⅱ): Properties of hydrogen bonding networks

Making use of the invariant property of the equilibrium size distribution of the hydrogen bonding clusters formed in hydrogen bonding system of AaDd type, the analytical expressions of the free energy in pregel and postgel regimes are obtained. Then the gel free energy and the scaling behavior of the number of hydrogen bonds in gel phase near the critical point are investigated to give the corresponding scaling exponents and scaling law. Meanwhile, some properties of intermolecular and intramolecular hydrogen bonds in the system, sol and gel phases are discussed. As a result, the explicit relationship between the number of intramolecular hydrogen bonds and hydrogen bonding degree is obtained.     

Crystal structure of indium(III) Schiff base complex

The title compound [In(C₂₂H₃₀N₄O₄)]Cl (I) bis[(N-salicylidene-N′-(2-hydroxyethyl)ethyleneediamine) indium(III) chloride is prepared, and its crystal structure is determined by single crystal X-ray diffraction at room temperature. The complex crystallizes in the monoclinic space group P2₁/n, a = 9.9704(6) ?, b = 24.9554(15) ?, c = 10.5707(6) ?, β = 116.46(2)°, V = 2354.6(2), Z = 4. The X-ray analysis reveals that the In^III ion is surrounded by four nitrogen and two oxygen atoms from two ligands leading to a distorted octahedral geometry. The molecule has the form of tongs at a junction point with the metal. Five membered rings adopt envelope conformation. In the crystal structure, the molecules are linked via N-H...Cl, O-H...O, O-H...Cl, and C-H...Cl intermolecular interactions. The structure is further stabilized by C-H...π (arene) interactions.     

Crystal structure and cytotoxic activities of a bis(pyrrolyl-imine) gold(III) complex

A gold(III) complex with N,N′-ethylenebis(pyrrol-2-yl-methyleneamine) (H₂pyren) was synthesized and characterized by physicochemical and spectroscopic measurements. Density functional theory (DFT) studies and cytotoxic assays were performed. Infrared, mass spectrometry, and ¹H, ¹³C, and {¹⁵N,¹H} nuclear magnetic resonance analyses indicate that pyren is deprotonated and gold(III) is four coordinate in a square planar environment, with the pyrrole and imine nitrogens as donors. The structure was confirmed by powder X-ray diffraction and confirmed as a minimum of the potential energy surface by DFT. Cytotoxic activity of [Au(pyren)]⁺ was active against three tumorigenic cell lines with IC₅₀ values of 35 μM. Interaction studies with CT-DNA by fluorescence and competition with ethidium bromide (EB) showed a quenching of the emission band of DNA with a Stern–Volmer quenching constant value of (3.0 ± 0.1) × 10⁴ M^?1 and a decrease in fluorescence quenching of EB-DNA system, respectively, confirming that DNA is a possible target for the complex via an intercalative binding, which was confirmed by DNA conformational changes observed with circular dichroism spectroscopy.     

Crystal structure and luminescence of antimony(III) chloride complex with anilinium chloride

Crystal structure of (C₆H₅NH₃)₃[SbCl₅]Cl·H₂O is determined by X-ray analysis (a = 9.4155(13) Å, b = 11.4344(16) Å, c = 13.1584(18) Å, α = 113.483(2)°, β = 90.383(2)°, γ = 97.323(2)°, space group P \(\bar 1\), Z = 2, ρ_calc = 1.642 g/cm³). The crystal structure is based on [SbCl₅]^2? anions, anilinium cations (C₆H₅NH₃)⁺, isolated Cl^? anions, and water molecules. Structural features responsible for spectral and luminescent properties of the complex are discussed.     

Crystal structure and hydrogen bonding system in cellulose I(alpha) from synchrotron X-ray and neutron fiber diffraction

The crystal and molecular structure, together with the hydrogen-bonding system in cellulose I(alpha), has been determined using atomic-resolution synchrotron and neutron diffraction data recorded from oriented fibrous samples prepared by aligning cellulose microcrystals from the cell wall of the freshwater alga Glaucocystis nostochinearum. The X-ray data were used to determine the C and O atom positions. The resulting structure is a one-chain triclinic unit cell with all glucosyl linkages and hydroxymethyl groups (tg) identical. However, adjacent sugar rings alternate in conformation giving the chain a cellobiosyl repeat. The chains organize in sheets packed in a "parallel-up" fashion. The positions of hydrogen atoms involved in hydrogen-bonding were determined from a Fourier-difference analysis using neutron diffraction data collected from hydrogenated and deuterated samples. The differences between the structure and hydrogen-bonding reported here for cellulose I(alpha) and previously for cellulose I(beta) provide potential explanations for the solid-state conversion of I(alpha) --> I(beta) and for the occurrence of two crystal phases in naturally occurring cellulose.     

Crystal structure and magnetic properties of dinuclear iron(III) complex with ONNO-donor ligand

A new dinuclear Fe(III) complex, [Fe(5-MeOL1)(OH)_0.86(CH₃O)_0.14]₂?2(CH₃OH), [H₂-5-MeOL1 = N,N′-bis(5-methoxy-2-hydroxybenzylidene)-2,2-dimethylpropane-1,3-diamine], 1 has been synthesized and characterized by single crystal structure analysis. The structure of 1 consists of two Fe(III) centers with one tetradentate schiff base ligand (N₂O₂) which are bridged by dihydroxo/dimethoxo groups to yield a Fe₂O₂ core. Complex 1 exhibits weak antiferromagnetic exchange interaction between Fe(III) ions with J = ?0.21 cm^–1.     

Zigzag-shaped supramolecular networks formed via hydrogen bonding. Crystal structures,DNA binding,and cytotoxic activity of a new palladium(II) complex

A single-ligand complex Pd(II)-L-aspartic acid was synthesized and characterized by elemental ana-lysis and IR spectra. The crystal structure of the complex was determined by single crystal X-ray diffraction (crystallizing in orthorhombic crystal system, space group P2₁2₁2₁ with unit cell parameters a = 5.3145(11) Å, b = 9.6294(19) Å, c = 22.233(4) Å, and Z = 4). The Pd atom was four-coordinated with N(1), N(2), O(4), and O(5) from two L-aspartic ligands and formed a slightly distorted parallelogram geometry. 2D “zigzag” shaped supramolecular networks are constructed via hydrogen bonding. The binding of the title complex with fish sperm DNA (FS-DNA) has been investigated by absorption and fluorescence spectra and the results indicate that the complex bind to FS-DNA in an intercalative mode. Gel electrophoresis shows the cleavage of both supercoiled and circular pBR322 DNA to form a small molecular fragment under the action of the title complex. The cytotoxicity assay proves that the complex has strong anticancer activity to human cervix epitheloid carcinoma cell lines (HeLa).     

Synthesis,structures and properties of two novel copper(II) complexes with hydrogen bonding supramolecular networks

Two novel complexes, [Cu(HL)₂(H₂O)]₂(OH)₂(ClO₄)₂·1.5H₂O (1) and [Cu(HL)₂]Cl₂·4H₂O (2), have been prepared by reacting copper salts with the 4-amino-3-ethyl-1,2,4-triazole-5-thione (HL) ligand in neutral solution and in HCl (6 mol L^–1) medium, respectively. They were characterized by FT-IR and u.v.–vis. spectra, and the structures were determined by single crystal X-ray diffraction techniques. In both complexes, the triazole ligand chelated the metal ions through the amine and thione substituents on the five-membered ring. Complex (1) has a square-pyramidal copper(II) ion coordinated by two triazole ligands and one water molecule. Unlike (1), the Cu²⁺ ion in (2) displays its characteristic Jahn–Teller distortion with the distance of the Cl^– anions to metal ion further away than that of the triazole ligands. The most intriguing structural features of the title complexes are that the HL ligands chelate copper(II) ions through the N(1) and S(1) atoms, in a cis mode in (1) and a trans mode in (2). In both cases, self-assembled crystals, by supramolecular contacts simultaneously, form two multi-dimensional frameworks.     

Crystal structure and spectroscopic behavior of three new tris-oxalatoferrate(III) salts

A new general synthetic procedure for preparation of Na₃[Fe(C₂O₄)₃]·5H₂O (1), Rb₃[Fe(C₂O₄)₃]·3H₂O (2), and Cs₃[Fe(C₂O₄)₃]·2H₂O (3) was developed. The crystal structures of these salts have been determined by single crystal X-ray diffraction. Salt 1 crystallizes in the monoclinic space group C2/c with Z = 8, salt 2 in P2₁/c with Z = 4, and salt 3 in P2₁/n with Z = 4. The three new salts and K₃[Fe(C₂O₄)₃]·3H₂O, prepared for comparative purposes, were further characterized by infrared and ⁵⁷Fe-Mössbauer spectroscopy. These spectra are discussed in comparison with those of related oxalato complexes.     

Crystal and molecular structure of an eight-coodinate N-methyltetraphenylporphyrin complex: diacetato(N-methyl-meso-tetraphenylporphyrinato)thallium(III)

The crystal structure of diacetato(N-methyl-meso-tetraphenylporphyrinato)thallium(III), Tl(N-Me-tpp)(OAc)2 (1), was established, and the coordination sphere around the Tl3+ ion is described as an eight-coordinate square-based antiprism in which two cis chelating bidentate OAc- groups occupy two apical sites. The plane of the three pyrrole nitrogen atoms (i.e., N(1), N(3), N(4)) strongly bonded to Tl3+ is adopted as a reference plane 3N. The pyrrole N(2) ring bearing the methyl group (i.e., C(45)H3) is the most deviated one from the 3N plane, making a dihedral angle of 21.4 degrees, whereas smaller angles of 9.1 degrees, 7.1 degrees, and 0.9 degree occur with pyrroles N(1), N(3), and N(4), respectively. Because of its larger size, the thallium(III) ion Tl3+ is considerably out of the 3N plane; its displacement of 1.17 A is in the same direction as that of the two apical OAc- ligands. The intermolecular acetate exchange process for 1 in THF-d8 solvent is examined through 1H NMR temperature-dependent measurements. In the slow-exchange region, the methyl and carbonyl carbons of the OAc- groups in 1 are separately located at delta 18.6 [3J(Tl-13C) = 405 Hz] and 170.8 [2J(Tl-13C) = 334 Hz] at -80 degrees C, respectively.     

Two new terpyridine dimanganese complexes: a manganese(III,III) complex with a single unsupported oxo bridge and a manganese(III,IV) complex with a dioxo bridge. Synthesis, structure, and redox properties

Two new terpyridine dimanganese oxo complexes [Mn(2)(III,IV)(mu-O)(2)(terpy)(2)(CF(3)CO(2))(2)](+) (3) and [Mn(2)(III,III)(mu-O)(terpy)(2)(CF(3)CO(2))(4)] (4) (terpy = 2,2':6,2' '-terpyridine) have been synthesized and their X-ray structures determined. In contrast to the corresponding mixed-valent aqua complex [Mn(2)(III,IV)(mu-O)(2)(terpy)(2)(H(2)O)(2)](3+) (1), the two Mn atoms in 3 are not crystallographically equivalent. The neutral binuclear monooxo manganese(III,III) complex 4 exhibits two crystallographic forms having cis and trans configurations. In the cis complex, the two CF(3)CO(2)(-) ligands on each manganese adopt a cis geometry to each other; one CF(3)CO(2)(-) is trans to the oxygen of the oxo bridge while the second is cis. In the trans complex, the two coordinated CF(3)CO(2)(-) have a trans geometry to each other and are cis to the oxo bridge. The electrochemical behavior of 3 in organic medium (CH(3)CN) shows that this complex could be oxidized into its corresponding stable manganese(IV,IV) species while its reduced form manganese(III,III) is very unstable and leads by a disproportionation process to Mn(II) and Mn(IV) complexes. Complex 4 is only stable in the solid state, and it disproportionates spontaneously in CH(3)CN solution into the mixed-valent complex 3 and the mononuclear complex [Mn(II)(terpy)(2)](2+) (2), thereby preventing the observation of its electrochemical behavior.     

Crystal structure of a La(III) complex with macrocyclic cavitand cucurbit[6]uril

Slow evaporation in air of a lanthanum nitrate solution containing macrocyclic cavitand cucurbit[6]uril yields a complex of the composition of [La(H₂O)₆(X@C₃₆H₃₆N₂₄O₁₂)(NO₃)](NO₃)₂· 6.96H₂O (X = 0.5C₅H₅N + 0.5H₂O). The complex is structurally characterized using single crystal X-ray diffraction. Lanthanum atoms are coordinated with oxygen atoms of carbonyl groups of cucurbit[6]uril portals. The compound crystallizes in the orthorhombic crystal system, space group Pnn2, unit cell parameters (150 K): a = 11.997(2) Å, b = 17.093(3) Å, c = 14.133(3) Å, V = 2899.3(10) ų, Z = 2. Lanthanum atoms are disordered, alternative positions being related by the two-fold axis. The complex has an island structure. A pyridine molecule occupies an internal cavity of one half of cucurbit[6]uril molecules, while a water molecule occupies the other.     

Crystal structure of a Mn(II) complex with isatin-hydrazone-S-benzyldithiocarbazate

The reaction of Mn(OAc)₂·4H₂O with isatin-hydrazone-S-benzyldithiocarbazate (HIsa-SBn) results in the formation of a bis-ligand complex [Mn(Isa-SBn)₂]·2DMF. Its single crystal is obtained and the structure is determined by X-ray diffraction. It belongs to a monoclinic space group C2/c with the cell parameters: a = 23.290(4) Å, b = 11.4980(18) Å, c = 18.483(5) Å, V = 4087.6(14) ų. The Mn(II) atom is six-coordinated with two amide O atoms, two azomethine N atoms, and two thiolate S atoms, resulting in a distorted octahedral geometry.