Synthesis and structural characterization of diiron azadithiolate complexes relevant to the active site of [FeFe] hydrogenases

Two N-functionally substituted diiron azadithiolate complexes, [(µ-SCH₂)₂NCH₂CH₂OC(O)C₆H₄I-p]Fe₂(CO)₆ (1) and {[(µ-SCH₂)₂NCH₂CH₂OC(O)C₆H₄I-p]Fe₂(CO)₅Ph₂PCH}₂ (2) as models for the active site of [FeFe] hydrogenases, have been prepared and fully characterized. Complex 1 was prepared by the reaction of [(µ-SCH₂)₂NCH₂CH₂OH]Fe₂(CO)₆ with p-iodobenzoic acid in the presence of 4-dimethylaminopyridine (DMAP) and N,N′-dicyclohexylcarbodiimide (DCC) in 78% yield. Further treatment of 1 with 1 equiv. of Me₃NO?·?2H₂O followed by 0.5 equiv. of trans-1,2-bis(diphenylphosphino)ethylene (dppe) affords 2 in 60% yield. The new complexes 1 and 2 were characterized by IR and ¹H (¹³C, ³¹P) NMR spectroscopic techniques and their molecular structures were confirmed by X-ray diffraction analysis. The molecular structure of 1 has two conformational isomers, in one isomer its N-functional substituent is axial to its bridged nitrogen and in the other isomer its N-functional substituent is equatorial. The crystal structure of 2 revealed that its N-functional substituents are equatorial to its nitrogens and dppe occupies the two apical positions of the square-pyramidal irons.     

Synthesis,characterization, and electrochemical properties of diiron azadithiolate complexes related to the active site of [FeFe]-hydrogenases

Treatment of [(μ-SCH₂)₂NPh]Fe₂(CO)₆ (A) with PPh₃ or PPh₂H in the presence of the decarbonylating agent Me₃NO·2H₂O afforded complexes [(μ-SCH₂)₂NPh]Fe₂(CO)₅(PPh₃) (1) and [(μ-SCH₂)₂NPh]Fe₂(CO)₅(PPh₂H) (2) in 87% and 74% yields, respectively. Complexes 1 and 2 were characterized by elemental analysis and various spectroscopic techniques. The molecular structures of 1 and 2 were further determined by X-ray crystallography. In both cases, the monophosphine ligand resides in an axial position of the square-pyramidal Fe atom and trans to the benzene ring of the azadithiolate ligand, in order to minimize steric repulsion. On the basis of electrochemical studies, all these complexes were found to catalyze proton reduction to H₂ in the presence of acetic acid.     

Synthesis,characterization, and crystal structures of N-functionalized diiron azadithiolate complexes related to the active site of [FeFe]-hydrogenases

A series of N-functionalized diiron azadithiolate complexes, [(µ-SCH₂)₂NCH₂CO₂Me]Fe₂(CO)_5?L [L?=?CO (1); PPh₃ (2); Ph₂PCH₂PPh₂ (3)], as active site models of [FeFe]-hydrogenases has been prepared and characterized. While 1 was prepared by a sequential reaction of (µ-HS)₂Fe₂(CO)₆ with two equiv. of aqueous HCHO, followed by treatment of (µ-HOCH₂S)₂Fe₂(CO)₆ with one equiv. of H₂NCH₂CO₂Me in 46% yield; 2 and 3 were prepared by a carbonyl substitution reaction of 1 with PPh₃ or Ph₂PCH₂PPh₂ in the presence of Me₃NO?·?2H₂O in 90% and 85% yields, respectively. The crystal structures of 1 and 2 revealed that the substituent attached to the bridgehead nitrogen occupies an equatorial position and the PPh₃ ligand resides in an axial position of the square pyramid of Fe2.     

Phosphine-substituted diiron 1,2-dithiolate complexes as the models for the active site of [FeFe]-hydrogenases

Abstract

In this article, five diiron 1,2-dithiolate complexes containing phosphine ligands are reported. Treatment of complex [Fe₂(CO)₆(μ-SCH₂CH₂S)] (1) with the phosphine ligands tris(4-methylphenyl)phosphine, tris(4-methoxyphenyl)phosphine, tris(3-chlorophenyl)phosphine, tris(3-methylphenyl)phosphine, or 2-(diphenylphosphino)biphenyl in the presence of Me₃NO·2H₂O as the decarbonylating agent afforded the target products [Fe₂(CO)₅(L)(μ-SCH₂CH₂S)] [L?=?P(4-C₆H₄CH₃)₃, 2; P(4-C₆H₄OCH₃)₃, 3; P(3-C₆H₄Cl)₃, 4; P(3-C₆H₄CH₃)₃, 5; Ph₂P(2-C₆H₄Ph), 6] in 80–93% yields. Complexes 2–6 have been characterized by elemental analysis, spectroscopy, and X-ray crystallography. Additionally, the electrochemical properties were studied by cyclic voltammetry.     

An insight into the protonation property of a diiron azadithiolate complex pertinent to the active site of Fe-only hydrogenases

Protonation of [{(mu-SCH2)2N(C6H4-p-NO2)}{Fe(CO)2(PMe3)}2] in the presence of 4 equiv. of HOTf afforded two species, a micro-hydride diiron complex, the molecular structure of which was crystallographically characterized, and a micro-S-protonated species, which was readily deprotonated in the presence of pyridine.     

Protonation, electrochemical properties and molecular structures of halogen-functionalized diiron azadithiolate complexes related to the active site of iron-only hydrogenases

Diiron complexes [{(micro-SCH2)2NCH2C6H4X}{Fe(CO)2L}2] (L = CO, X = 2-Br, 1; 2-F, 2; 3-Br, 3; L = PMe(3), X = 2-Br, 4) were prepared as biomimetic models of the iron-only hydrogenase active site. The N-protonated species [(NH)]+ClO(4)(-), [(NH)](+)ClO(4)(-) and the micro-hydride diiron complex [4(FeHFe)]+PF(6)(-) were obtained in the presence of proton acids and well characterized. The protonation process of 4 was studied by in-situ IR and NMR spectroscopy, which suggests the formation of the diprotonated species [4(NH)(FeHFe)](2+) in the presence of an excess of proton acid. The molecular structures of 1, [(NH)]+ClO(4)(-), 4 and [4(FeHFe)]+PF(6)(-) were determined by X-ray crystallography. The single-crystal X-ray analysis reveals that an intramolecular H...Br contact (2.82 A) in the crystalline state of [1(NH)]+ClO(4)(-). In the presence of 1-6 equiv of the stronger acid HOTf, complex 1 is readily protonated on the bridged-N atom and can electrochemically catalyze the proton reduction at a relatively mild potential (ca.-1.0 V). Complex 4 is also electrocatalytic active at -1.4 V in the presence of HOTf with formation of the micro-hydride diiron species.     

Nitrosyl derivatives of diiron(I) dithiolates mimic the structure and Lewis acidity of the [FeFe]-hydrogenase active site

This study probes the impact of electronic asymmetry of diiron(I) dithiolato carbonyls. Treatment of Fe2(S2C(n)H(2n))(CO)(6-x)(PMe3)x compounds (n = 2, 3; x = 1, 2, 3) with NOBF4 gave the derivatives [Fe2(S2C(n)H(2n))(CO)(5-x)(PMe3)x(NO)]BF4, which are electronically unsymmetrical because of the presence of a single NO(+) ligand. Whereas the monophosphine derivative is largely undistorted, the bis(PMe3) derivatives are distorted such that the CO ligand on the Fe(CO)(PMe3)(NO)(+) subunit is semibridging. Two isomers of [Fe2(S2C3H6)(CO)3(PMe3)2(NO)]BF4 were characterized spectroscopically and crystallographically. Each isomer features electron-rich Fe(CO)2PMe3 and electrophilic Fe(CO)(PMe3)(NO)(+) subunits. These species are in equilibrium with an unobserved isomer that reversibly binds CO (DeltaH = -35 kJ/mol, DeltaS = -139 J mol(-1) K(-1)) to give the symmetrical adduct [Fe2(S2C3H6)(mu-NO)(CO)4(PMe3)2]BF4. In contrast to Fe2(S2C3H6)(CO)4(PMe3)2, the bis(PMe3) nitrosyl complexes readily undergo CO substitution to give the (PMe3)3 derivatives. The nitrosyl complexes reduce at potentials that are approximately 1 V milder than their carbonyl counterparts. Results of density functional theory calculations, specifically natural bond orbital analysis, reinforce the electronic resemblance of the nitrosyl complexes to the corresponding mixed-valence diiron complexes. Unlike other diiron dithiolato carbonyls, these species undergo reversible reductions at mild potentials. The results show that the novel structural and chemical features associated with mixed-valence diiron dithiolates (the so-called H(ox) models) can be replicated in the absence of mixed-valency by the introduction of electronic asymmetry.     

Synthetic and structural studies on [Fe2(SR)2(CN)x(CO)6-x](x-) as active site models for Fe-only hydrogenases.

A series of models for the active site (H-cluster) of the iron-only hydrogenase enzymes (Fe-only H2-ases) were prepared. Treatment of MeCN solutions of Fe2(SR)2(CO)6 with 2 equiv of Et4NCN gave [Fe2(SR)2(CN)2(CO)4](2-) compounds. IR spectra of the dicyanides feature four nu(CO) bands between 1965 and 1870 cm(-1) and two nu(CN) bands at 2077 and 2033 cm(-1). For alkyl derivatives, both diequatorial and axial-equatorial isomers were observed by NMR analysis. Also prepared were a series of dithiolate derivatives (Et4N)2[Fe2(SR)2(CN)2(CO)4], where (SR)2 = S(CH2)2S, S(CH2)3S. Reaction of Et4NCN with Fe2(S-t-Bu)2(CO)6 gave initially [Fe2(S-t-Bu)2(CN)2(CO)4](2-), which comproportionated to give [Fe2(S-t-Bu)2(CN)(CO)5](-). The mechanism of the CN(-)-for-CO substitution was probed as follows: (i) excess CN(-) with a 1:1 mixture of Fe2(SMe)2(CO)6 and Fe2(SC6H4Me)2(CO)6 gave no mixed thiolates, (ii) treatment of Fe2(S2C3H6)(CO)6 with Me3NO followed by Et4NCN gave (Et4N)[Fe2(S2C3H6)(CN)(CO)5], which is a well-behaved salt, (iii) treatment of Fe2(S2C3H6)(CO)6 with Et4NCN in the presence of excess PMe3 gave (Et4N)[Fe2(S2C3H6)(CN)(CO)4(PMe3)] much more rapidly than the reaction of PMe3 with (Et4N)[Fe2(S2C3H6)(CN)(CO)5], and (iv) a competition experiment showed that Et4NCN reacts with Fe2(S2C3H6)(CO)6 more rapidly than with (Et4N)[Fe2(S2C3H6)(CN)(CO)5]. Salts of [Fe2(SR)2(CN)2(CO)4](2-) (for (SR)2 = (SMe)2 and S2C2H4) and the monocyanides [Fe2(S2C3H6)(CN)(CO)5](-) and [Fe2(S-t-Bu)2(CN)(CO)5](-) were characterized crystallographically; in each case, the Fe-CO distances were approximately 10% shorter than the Fe-CN distances. The oxidation potentials for Fe2(S2C3H6)(CO)4L2 become milder for L = CO, followed by MeNC, PMe3, and CN(-); the range is approximately 1.3 V. In water,oxidation of [Fe2(S2C3H6)(CN)2(CO)4](2-) occurs irreversibly at -0.12 V (Ag/AgCl) and is coupled to a second oxidation.     

Synthesis, structure, and electrocatalysis of diiron C-functionalized propanedithiolate (PDT) complexes related to the active site of [FeFe]-hydrogenases

New C-functionalized propanedithiolate-type model complexes (1-8) have been synthesized by functional transformation reactions of the known complex [(mu-SCH2)2CH(OH)]Fe2(CO)6 (A). Treatment of A with the acylating agents PhC(O)Cl, 4-pyridinecarboxylic acid chloride, 2-furancarbonyl chloride, and 2-thiophenecarbonyl chloride in the presence of Et3N affords the expected C-functionalized complexes [(mu-SCH2)2CHO2CPh]Fe2(CO)6 (1), [(mu-SCH2)2CHO2CC5H4N-4]Fe2(CO)6 (2), [(mu-SCH2)2CHO2CC4H3O-2]Fe2(CO)6 (3), and [(mu-SCH2)2CHO2CC4H3S-2]Fe2(CO)6 (4). However, when A is treated with the phosphatizing agents Ph2PCl, PCl3 and PBr3, both C- and Fe-functionalized complexes [(mu-SCH2) 2CHOPPh2-eta1]Fe2(CO)5 (5), [(mu-SCH2) 2CHOPCl2-eta1]Fe2(CO)5 (6), and [(mu-SCH2) 2CHOPBr2-eta1]Fe2(CO)5 (7) are unexpectedly obtained via intramolecular CO substitution by P atoms of the initially formed phosphite complexes. The simplest C-functionalized model complex [(mu-SCH2) 2CO]Fe2(CO)6 (8) can be produced by oxidation of A with Dess-Martin reagent. While 8 is found to be an electrocatalyst for proton reduction to hydrogen, starting complex A can be prepared by another method involving the reaction of HC(OH)(CH2Br)2 with the in situ generated (mu-LiS) 2Fe2(CO)6. X-ray crystallographic studies reveal that the bridgehead C atom of 8 is double-bonded to an O atom to form a ketone functionality, whereas the bridgehead C atoms of A, 1, 3, and 4 are equatorially-bonded to their functionalities and those of 5-7 axially-bonded to their functionalities due to formation of the corresponding P-Fe bond-containing heterocycles.     

First insights into the protonation of dissymetrically disubstituted di-iron azadithiolate models of the [FeFe]H2ases active site

Dissymetrically disubstituted di-iron azadithiolate complexes [Fe2(CO)4(kappa 2-LL){mu-SCH2N(iPr)CH2S}] (LL = dppe, phen) protonate exclusively at the N atom of the bridge, like the hexacarbonyl precursor but in contrast to symmetrically disubstituted analogues; substitution of dppe for two CO groups noticeably increases the kinetics of the electrocatalytic proton reduction process.     

Electron-transfer-catalyzed rearrangement of unsymmetrically substituted diiron dithiolate complexes related to the active site of the [FeFe]-hydrogenases

Novel asymmetrically substituted azadithiolate compounds [Fe2(CO)4(kappa2-dppe){micro-SCH2N(R)CH2S}] (R=iPr, 1a; CH2CH2OCH3, 1b; CH2C6H5, 1c) have been synthesized by treatment of [Fe2(CO)6(micro-adt)] [adt=SCH2N(R)CH2S, with R=iPr, CH2CH2OCH3, CH2C6H5] with dppe (dppe=Ph2PCH2CH2PPh2) in refluxing toluene in the presence of Me3NO. 1a-c have been characterized by single-crystal X-ray diffraction analyses. The electrochemical investigation of 1a-c and of [Fe2(CO)4(kappa2-dppe)(micro-pdt)] (1d) [pdt=S(CH2)3S] in MeCN- and THF-[NBu4][PF6] has demonstrated that the electrochemical reduction of 1a-d gives rise to an Electron-transfer-catalyzed (ETC) isomerization to the symmetrical isomers 2a-d where the dppe ligand bridges the iron centers. Compounds 2a-d were characterized by IR and NMR spectroscopy, elemental analysis, and X-ray crystallography for 2a.     

On the electrochemistry of diiron dithiolate complexes related to the active site of the [FeFe]H2ase

A few recent electrochemical studies of diiron models of the iron-only hydrogenases' active site are summarized. Emphasis is put on the reduction mechanisms of hexacarbonyl complexes and on the different mechanisms of proton reduction that may operate depending on the nature of the complex and the strength of the acid. An attempt is made to discuss the thermodynamic and kinetic limitations of proton reduction processes supported by these compounds.     

Synthesis and characterization of carboxy-functionalized diiron model complexes of [FeFe]-hydrogenases: Decarboxylation of Ph2PCH2COOH promoted by a diiron azadithiolate complex

Two carboxy-functionalized diiron complexes [{(μ-SCH₂)₂X}{Fe(CO)₃}{Fe(CO)₂L}] (X = NC₃H₇, L = Ph₂PCH₂CH₂COOH, 4; X = CH₂, L = Ph₂PCH₂COOH, 5) were prepared, as biomimetic models of the [FeFe] hydrogenase active site, from the CO-replacement of [{(μ-SCH₂)₂NC₃H₇}Fe₂(CO)₆] (1) and (μ-pdt)Fe₂(CO)₆ (2) by phosphine ligands in CH₃CN at 40 °C, respectively. In contrast, the reaction of 1 with Ph₂PCH₂COOH under the same condition afforded complex [{(μ-SCH₂)₂NC₃H₇}{Fe(CO)₃}{Fe(CO)₂(Ph₂PCH₃)}] (3) with a decarboxylated phosphine ligand. The molecular structures of complexes 3-5 were determined by X-ray crystallographic analyses, which show that they have similar frameworks with the phosphine ligand on the apical position. The interesting C-H···S contacts between the methylene hydrogen atoms of the PhCH₂COOH ligand and the μ-S atoms of the pdt-bridge are found in the crystal of 5. According to the experimental evidence, a plausible mechanism, via sequential phosphine coordination, N-protonation, and decarboxylation steps, is proposed for the formation of 3 and for explanation of the contrastive reactivities of the adt- (2-aza-1,3-propanedithiolato) and the pdt- (1,3-propanedithiolato) bridged diiron complexes toward decarboxylation of the Ph₂PCH₂COOH ligand.     

Site-selective X-ray spectroscopy on an asymmetric model complex of the [FeFe] hydrogenase active site

The active site for hydrogen production in [FeFe] hydrogenase comprises a diiron unit. Bioinorganic chemistry has modeled important features of this center, aiming at mechanistic understanding and the development of novel catalysts. However, new assays are required for analyzing the effects of ligand variations at the metal ions. By high-resolution X-ray absorption spectroscopy with narrow-band X-ray emission detection (XAS/XES = XAES) and density functional theory (DFT), we studied an asymmetrically coordinated [FeFe] model complex, [(CO)(3)Fe(I)1-(bdtCl(2))-Fe(I)2(CO)(Ph(2)P-CH(2)-NCH(3)-CH(2)-PPh(2))] (1, bdt = benzene-1,2-dithiolate), in comparison to iron-carbonyl references. Kβ emission spectra (Kβ(1,3), Kβ') revealed the absence of unpaired spins and the low-spin character for both Fe ions in 1. In a series of low-spin iron compounds, the Kβ(1,3) energy did not reflect the formal iron oxidation state, but it decreases with increasing ligand field strength due to shorter iron-ligand bonds, following the spectrochemical series. The intensity of the valence-to-core transitions (Kβ(2,5)) decreases for increasing Fe-ligand bond length, certain emission peaks allow counting of Fe-CO bonds, and even molecular orbitals (MOs) located on the metal-bridging bdt group of 1 contribute to the spectra. As deduced from 3d → 1s emission and 1s → 3d absorption spectra and supported by DFT, the HOMO-LUMO gap of 1 is about 2.8 eV. Kβ-detected XANES spectra in agreement with DFT revealed considerable electronic asymmetry in 1; the energies and occupancies of Fe-d dominated MOs resemble a square-pyramidal Fe(0) for Fe1 and an octahedral Fe(II) for Fe2. EXAFS spectra for various Kβ emission energies showed considerable site-selectivity; approximate structural parameters similar to the crystal structure could be determined for the two individual iron atoms of 1 in powder samples. These results suggest that metal site- and spin-selective XAES on [FeFe] hydrogenase protein and active site models may provide a powerful tool to study intermediates under reaction conditions.     

Selenium-bridged diiron hexacarbonyl complexes as biomimetic models for the active site of Fe-Fe hydrogenases

Three N-substituted selenium-bridged diiron complexes [{(mu-SeCH2)2NC6H4R}Fe2(CO)6] (R = 4-NO2, 7; R = H, 8; R = 4-CH3, 9) were firstly prepared as biomimetic models for the Fe-Fe hydrogenases active site. Models could be generated by the convergent reaction of [(mu-HSe)2Fe2(CO)6] (6) with N,N-bis(hydroxymethyl)-4-nitroaniline (1), N,N-bis(hydroxymethyl)aniline (2), and N,N-bis(hydroxymethyl)-4-methylaniline (3) in 46-52% yields. All the new complexes were characterized by IR, 1H and 13C NMR and HRMS spectra and their molecular structures were determined by single-crystal X-ray analysis. The redox properties of and their dithiolate analogues [{(mu-SCH2)2NC6H4R}Fe2(CO)6] (R = 4-NO2, 7s; R = H, 8s; R = 4-CH3, 9s ) were evaluated by cyclic voltammograms. The electrochemical proton reduction by and were investigated in the presence of p-toluenesulfonic acid (HOTs) to evaluate the influence of changing the coordinating S atoms of the bridging ligands to Se atoms on the electrocatalytic activity for proton reduction.     

Time-resolved vibrational spectroscopy of [FeFe]-hydrogenase model compounds

Model compounds have been found to structurally mimic the catalytic hydrogen-producing active site of Fe-Fe hydrogenases and are being explored as functional models. The time-dependent behavior of Fe(2)(μ-S(2)C(3)H(6))(CO)(6) and Fe(2)(μ-S(2)C(2)H(4))(CO)(6) is reviewed and new ultrafast UV- and visible-excitation/IR-probe measurements of the carbonyl stretching region are presented. Ground-state and excited-state electronic and vibrational properties of Fe(2)(μ-S(2)C(3)H(6))(CO)(6) were studied with density functional theory (DFT) calculations. For Fe(2)(μ-S(2)C(3)H(6))(CO)(6) excited with 266 nm, long-lived signals (τ = 3.7 ± 0.26 μs) are assigned to loss of a CO ligand. For 355 and 532 nm excitation, short-lived (τ = 150 ± 17 ps) bands are observed in addition to CO-loss product. Short-lived transient absorption intensities are smaller for 355 nm and much larger for 532 nm excitation and are assigned to a short-lived photoproduct resulting from excited electronic state structural reorganization of the Fe-Fe bond. Because these molecules are tethered by bridging disulfur ligands, this extended di-iron bond relaxes during the excited state decay. Interestingly, and perhaps fortuitously, the time-dependent DFT-optimized exited-state geometry of Fe(2)(μ-S(2)C(3)H(6))(CO)(6) with a semibridging CO is reminiscent of the geometry of the Fe(2)S(2) subcluster of the active site observed in Fe-Fe hydrogenase X-ray crystal structures. We suggest these wavelength-dependent excitation dynamics could significantly alter potential mechanisms for light-driven catalysis.     

Spectroscopic and crystallographic evidence for the N-protonated FeIFeI azadithiolate complex related to the active site of Fe-only hydrogenases

The complex [{(mu-SCH2)2N(CH2C6H4-2-Br)}Fe2(CO)6] and its N-protonated species, as structural models of the Fe-only hydrogenase active site, were identified spectroscopically and crystallographically, and their molecular structures show the 0.04-0.1 A lengthening of the three N-C bonds and an intramolecular HBr contact (2.82 Angstroms) in the crystalline state of the N-protonated species.