p‐Cresyl 2,3‐an­hydro‐5‐deoxy‐5‐phthal­imido‐1‐thio‐α‐d‐lyxo­furan­oside

The crystal structure of the title compound, C₂₀H₁₇NO₄S, (I), was determined in order to compare the solution and solid‐state conformations. The mol­ecule was synthesized as a building block for incorporation into oligosaccharides comprised of conformationally restricted furan­ose residues. The furan­ose ring adopts an envelope conformation with the ring O atom displaced above the plane (an ^OE conformation). The pseudorotational phase angle (P) is 88.6° and the puckering amplitude (τ_m) is 31.5°. The C₂—C₁—S—C(Ph) torsion angle is ?163.2 (2)°, which places the aglycone in the exo‐anomeric effect preferred position. The C1—S—C14 bond angle is 99.02 (13)° and the plane of the cresyl moiety is oriented nearly parallel to the four in‐plane atoms of the furan­ose ring envelope. The orientation about the C4—C5 bond is gauche–gauche [Bock & Duus (1994). J. Carbohydr. Chem. 13 , 513–543].     

catena‐Poly­[[silver(I)‐μ‐hexane‐1,6‐di­amine‐κ2N:N′] cinnamate dihydrate]

The title compound, {[Ag(C₆H₁₆N₂)](C₉H₇O₂)·2H₂O}_n, has been synthesized and characterized by elemental analysis and single‐crystal X‐ray diffraction. The Ag atom is coordinated in a linear configuration by two N atoms from two hexane‐1,6‐­diamine ligands, giving a zigzag polymeric chain with an [–Ag—N—C—C—C—C—C—C—N–]_n backbone running parallel to the c axis. In the crystal packing, adjacent chains interact with the anions via the lattice water mol­ecules, thus forming layers parallel to the bc plane.     

trans‐Bis[1‐benzyl‐3‐(2,3,4,5,6‐penta­fluoro­benz­yl)benzimidazol‐2‐yl­idene]­dibromo­palladium(II)

The title compound, [PdBr₂(C₂₁H₁₃F₅N₂)₂], crystallizes with two independent centrosymmetric conformational isomers having a square‐planar coordination at the Pd atom. The conformational isomers differ by the ligands having a cis or trans orientation of their benzyl and pentafluorobenzyl rings with respect to the benzimidazole ring plane. The benzimidazole rings are rotated with respect to the coordination plane of the metal by 79.1 (2) and 75.2 (1)° for mol­ecules A and B, respectively. The Pd—Br bond lengths are 2.4218 (8) and 2.4407 (10) Å for mol­ecules A and B, respectively, and the Pd—C bond lengths are 2.030 (8) and 2.018 (9) Å. The crystal structure contains two types of C—H⋯F and one type of C—H⋯Br intra­molecular contact, as well as C—H⋯π inter­actions.     

catena‐Poly­[[bis­[μ‐1,2‐bis(1‐methyl­tetrazol‐5‐yl)­ethane‐κ2N4:N4′]bis[chloro­copper(II)]]‐di‐μ‐chloro]

In the title compound, [Cu₂Cl₄(C₆H₁₀N₈)₂]_n, the ligand has C₂ symmetry, and the Cu and Cl atoms lie on a mirror plane. The coordination polyhedron of the Cu atom is a distorted square pyramid, with the basal positions occupied by two N atoms from two different ligands [Cu—N = 2.0407 (18) Å] and by the two Cl atoms [Cu—Cl = 2.2705 (8) and 2.2499 (9) Å], and the apical position occupied by a Cl atom [Cu—Cl = 2.8154 (9) Å] that belongs to the basal plane of a neighbouring Cu atom. The [CuCl₂(C₆H₁₀N₈)]₂ units form infinite chains extending along the a axis via the Cl atoms. Intermolecular C—H⃛Cl contacts [C⃛Cl = 3.484 (2) Å] are also present in the chains. The chains are linked together by intermolecular C—H⃛N interactions [C⃛N = 3.314 (3) Å].     

Diaquatetrakis(tert‐butyl isocyanide)cobalt(II) bis(perchlorate): an example of cobalt(II) coordinated by only four alkyl isocyanide ligands

The title compound, [Co(C₅H₉N)₄(H₂O)₂](ClO₄)₂, crystallizes in the monoclinic space group C2/m. The cation has space‐group‐imposed 2/m symmetry, while the perchlorate ion is disordered about a mirror plane. The two slightly non‐equivalent Co—C bonds [1.900 (3) and 1.911 (3) Å] form a rectangular plane, with a C—Co—C bond angle of 86.83 (11)°, and the linear O—Co—O C₂ axis is perpendicular to this plane. The C[triple‐bond]N bond lengths are 1.141 (4) Å and the Co—C[triple‐bond]N and C[triple‐bond]N—C angles average 175.5 (4)°. The perchlorate counter‐ions are hydrogen bonded to the water molecules. The title compound is the first example of four alkyl isocyanide ligands coordinating Co^II upon initial reaction of Co(ClO₄)₂·6H₂O/EtOH with alkyl isocyanide. In all other known examples, five alkyl isocyanide molecules are coordinated, as in [(RNC)₅Co—Co(CNR)₅](ClO₄)₄ (R = Me, Et, CHMe₂, CH₂Ph, C₄H₉‐n or C₆H₁₁) or [Co(CNC₈H₁₇‐t)₅](ClO₄)₂. This complex, therefore, is unique and somewhat unexpected.     

catena‐Poly­[[silver(I)‐μ‐ethane‐1,2‐diamine‐κ2N:N′] 3‐fluorobenzoate monohydrate]

The title compound, {[Ag(C₂H₈N₂)](C₇H₄FO₂)·H₂O}_n, has been synthesized and characterized by elemental analysis and single‐crystal X‐ray diffraction. The Ag atom is bicoordinated in a linear configuration by two N atoms from two symmetry‐related ethyl­enedi­amine ligands, giving linear polymeric chains with [–Ag—N—C—C—N–]_n backbones running parallel to the b axis. In the crystal packing, these linear chains are interconnected by N—H⋯O and O—H⋯O hydrogen bonds, and by weak Ag⋯OW interactions, forming layers parallel to the ab plane.     

cis‐Bis(3,6‐di­hydro‐2H‐1,2‐oxazine‐N)­di­iodo­platinum(II) and cis‐bis(3,4,5,6‐tetra­hydro‐2H‐1,2‐oxazine‐N)­di­iodo­platinum(II)

The title complexes, [Pt(C₄H₇NO)₂I₂], (I), and [Pt(C₄H₉NO)₂I₂], (II), possess similar square‐planar coordination geometries with modest distortions from ideality. For (I), the cis‐L—Pt—L angles are in the range 87.0 (4)–94.2 (3)°, while the trans angles are 174.4 (3) and 176.4 (3)°. For (II), cis‐L—Pt—L are 86.1 (8)–94.2 (6)° and trans‐L—Pt—L are 174.4 (6) and 177.4 (5)°. One 3,6‐di­hydro‐2H‐1,2‐oxazine ligand in (I) is rotated so that the N—O bond is out of the square plane by approximately 70°, while the N—C bond is only ca 20° out of the plane. The other oxazine ligand is rotated so that the N—C bond is about 80° out of the plane, while the N—O bond is out of the plane by approximately 24°. In (II), the 3,4,5,6‐tetra­hydro‐2H‐1,2‐oxazine ligands are also positioned with one having the N—O bond further out of the plane and the other having the N—C bond positioned in that fashion. Both ligands, however, are rotated approximately 90° compared with their positions in (I). In both complexes, this results in an unsymmetrical distortion of the I—Pt—N bond angles in which one is expanded and the other contracted. These features are compared to those of reported cis‐di­amine­di­iodo­platinum(II) complexes.     

Bis­[N,N‐bis(2‐hydroxy­ethyl)­di­thio­carbamato]­di­methyl­tin(IV)

The title compound, [Sn(CH₃)₂(C₅H₁₀NO₂S₂)₂], has crystallographic mirror symmetry (C—Sn—C on mirror plane) and the coordination polyhedron around the Sn atom is a tetrahedron [C—Sn—C 139.3 (2)° and S—Sn—S 82.3 (1)°] distorted towards a skew‐trapezoidal bipyramid owing to an intramolecular Sn?S contact [3.0427 (6) Å]. The mol­ecules are linked into a linear chain by intermolecular O—H?O hydrogen bonds [O?O 2.646 (3) Å].     

Side‐chain conformations in the isomorphous polyfluorinated {4,4′‐bis[(2,2‐difluoroethoxy)methyl]‐2,2′‐bipyridine‐κ2N,N′}dichloridopalladium and ‐platinum complexes

The polyfluorinated title compounds, [M Cl₂(C₁₆H₁₆F₄N₂O₂)] or [4,4′‐(HCF₂CH₂OCH₂)₂‐2,2′‐bpy]M Cl₂ [M = Pd, ( 1 ), and M = Pt, ( 2 )], have –C(H_α)₂OC(H_β)₂CF₂H side chains with H‐atom donors at the α and β sites. The structures of ( 1 ) and ( 2 ) are isomorphous, with the nearly planar (bpy)M Cl₂ molecules stacked in columns. Within one column, π‐dimer pairs alternate between a π‐dimer pair reinforced with C—H…Cl hydrogen bonds (α,α) and a π‐dimer pair reinforced with C—H_β…F(—C) interactions (abbreviated as C—H_β…F—C,C—H_β…F—C). The compounds [4,4′‐(CF₃CH₂OCH₂)₂‐2,2′‐bpy]M Cl₂ [M = Pd, ( 3 ), and M = Pt, ( 4 )] have been reported to be isomorphous [Lu et al. (2012). J. Fluorine Chem. 137 , 54–56], yet with disorder in the fluorous regions. The molecules of ( 3 ) [or ( 4 )] also form similar stacks, but with alternating π‐dimer pairs between the (α,β; α,β) and (β,β) forms. Through (C—)H…Cl hydrogen‐bond interactions, one molecule of ( 1 ) [or ( 2 )] is expanded into an aggregate of two inversion‐related π‐dimer pairs, one pair in the (α,α) form and the other pair in the (C—H_β…F—C,C—H_β…F—C) form, with the plane normals making an interplanar angle of 58.24 (3)°. Due to the demands of maintaining a high coordination number around the metal‐bound Cl atoms in molecule ( 1 ) [or ( 2 )], the ponytails of molecule ( 1 ) [or ( 2 )] bend outward; in contrast, the ponytails of molecule ( 3 ) [or ( 4 )] bend inward.     

Polymeric structure of (ethyl­ene­diamine)silver(I) 3‐nitro­benzoate monohydrate

In the ternary title compound, catena‐poly­[[silver(I)‐μ‐ethylenedi­amine‐κ²N:N′] 3‐nitro­benzoate monohydrate], {[Ag(C₂H₈N₂)](C₇H₄NO₄)·H₂O}_n, the Ag atom is bicoordinated in a linear configuration by two different N atoms from two symmetry‐related ethyl­enedi­amine ligands, thus giving linear polymeric chains with an [–Ag—N—C—C—N–]_n backbone running parallel to the a axis. In the crystal packing, these linear chains are interconnected by N—H⃛O and O—H⃛O hydrogen bonds to form layers parallel to the ab plane.     

2,3,12,13‐Tetrabromo‐5,10,15,20‐tetrakis(4‐butoxyphenyl)porphyrin 1,2‐dichloroethane solvate

Nonmesogenic 2,3,12,13‐tetrabromo‐5,10,15,20‐tetrakis(4‐butoxyphenyl)porphyrin crystallizes as the title 1,2‐dichloroethane solvate, C₆₀H₅₈Br₄N₄O₄·C₂H₄Cl₂. The porphyrin ring shows a nonplanar conformation, with an average mean plane displacement of the β‐pyrrole C atoms from the 24‐atom (C₂₀N₄) core of ±0.50 (3) Å. The 1,2‐dichloroethane solvent is incorporated between the porphyrin units and induces the formation of one‐dimensional chains via interhalogen Cl...Br and butyl–aryl C—H...π interactions. These chains are oriented along the unit‐cell a axis, with the macrocyclic ring planes lying almost parallel to the (010) plane. The chains are arranged in an offset fashion by aligning the butoxy chains approximately above or below the faces of the adjacent porphyrin core, resulting in decreased interporphyrin π–π interactions, and they are held together by weak intermolecular (C—Br...π, C—H...π and C—H...Br) interactions. The nonplanar geometry of the macrocyclic ring is probably due to the weak interporphyrin interactions induced by the solvent molecule and the peripheral butoxy groups. The nonplanarity of the mesogens could influence the mesogenic behaviour differently relative to planar porphyrin mesogens.     

trans‐Dichloro(dimethyl sulfide‐κS)(pyridine‐κN)platinum(II)

The structure of the title compound, [PtCl₂(C₅H₅N)(C₂H₆S)], consists of discrete mol­ecules in which the Pt‐atom coordination is slightly distorted square planar. The Cl atoms are trans to each other, with a Cl—Pt—Cl angle of 176.60 (7)°. The pyridine ligand is rotated 64.5 (2)° from the Pt square plane and one of the Pt—Cl bonds essentially bisects the C—S—C angle of the di­methyl sulfide ligand. In the crystal structure, there are extensive weak C—H⋯Cl interactions, the shortest of which connects mol­ecules into centrosymmetric dimers. A comparison of the structural trans influence on Pt—S and Pt—­N distances for PtS(CH₃)₂ and Pt(pyridine) fragments, respectively, in square‐planar Pt^II complexes is presented.     

4‐Amino‐N‐isopropyl­benzamidinium chloride ethanol solvate

The title compound, C₁₀H₁₆N·Cl⁻·C₂H₆O, is an important intermediate in the convergent synthesis of amidine‐substituted polycyclic heterocycles, a class of compounds that shows significant anticancer activity. The molecule of (I) is not planar, having a dihedral angle of 25.00 (7)° between the aniline and amidine (–C—NH=C=NH₂) groups. The proton­ation of the amidine molecular fragment is accompanied by delocalized C—N bond distances of 1.320 (2) and 1.317 (2) Å. The cations and chloride anions are involved in a network of hydrogen bonds, resulting in the formation of infinite chains propagating along the b direction. The chains are further grouped within the ab plane, in such a way that the structure is segregated into layers dominated by hydro­phobic interactions involving N‐isopropyl residues and layers dominated by N—H⋯Cl [N⋯Cl = 3.275 (2)–3.596 (2) Å], O—H⋯Cl [O⋯Cl = 3.229 (3) Å] and N—H⋯O [N⋯O = 2.965 (3) Å] hydrogen bonds.     

5‐Ethyl‐2′‐deoxy‐4′‐thiouridine (R)‐S‐oxide monohydrate

The pyrimidine ring of the title compound, C₁₁H₁₆N₂O₅S·H₂O, is planar to within 0.026 (1) Å and makes an angle of 77.73 (8)° with the mean plane of the thiosugar ring. In terms of standard nucleoside nomenclature, this ring has a C1′‐exo,C2′‐endo conformation. The O5′—C5′—C4′—C3′ torsion angle is ?167.4 (2)° and the glycosidic S4′—C1′—N1—C2 torsion angle is ?101.8 (2)° (anti).     

Di­chloro­[(6R,7S,8S,14S)‐(–)‐sparteine‐κ2N,N′]­nickel(II)

In the title compound, [NiCl₂(C₁₅H₂₆N₂)], the chiral alkaloid (6R,7S,8S,14S)‐(−)‐l ‐sparteine acts as a bidentate ligand, with two chloride ligands occupying the remaining coordination sites, producing a slightly distorted tetrahedron. The N—Ni—N plane in the title complex is twisted by 81.31 (11)° from the Cl—Ni—Cl plane. Other distortions of the tetrahedron are discussed.     

Two trans‐4‐aminoazoxybenzenes

Two isomeric trans‐4‐amino­azoxy­benzenes, trans‐1‐(4‐amino­phenyl)‐2‐phenyl­diazene 2‐oxide (α, C₁₂H₁₁N₃O) and trans‐2‐(4‐amino­phenyl)‐1‐phenyl­diazene 2‐oxide (β, C₁₂H₁₁N₃O), have been characterized by X‐ray diffraction. The α isomer is almost planar, having torsion angles along the C_aryl—N bonds of only 4.9 (2) and 8.0 (2)°. The relatively short C_aryl—N bond to the non‐oxidized site of the azoxy group [1.401 (2) Å], together with the significant quinoid deformation of the respective phenyl ring, is evidence of conjugation between the aromatic sextet and the π‐electron system of the azoxy group. The geometry of the β isomer is different. The non‐substituted phenyl ring is twisted with respect to the NNO plane by ca 50°, whereas the substituted ring is almost coplanar with the NNO plane. The non‐oxidized N atom in the β isomer has increased sp³ character, which leads to a decrease in the N—N—C bond angle to 116.8 (2)°, in contrast with 120.9 (1)° for the α isomer. The deformation of the C—C—C angles (1–2°) in the phenyl rings at the substitution positions is evidence of the different character of the oxidized and non‐oxidized N atoms of the azoxy group. In the crystal structures, mol­ecules of both isomers are arranged in chains connected by weak N—H?O (α and β) and N—H?N (β) hydrogen bonds.     

Bis{2‐[(phenylimino)ethyl]‐1H‐pyrrol‐1‐ido‐κ2N,N′}nickel(II): a supramolecular structure formed by C—H...π hydrogen bonds

In the title compound, [Ni(C₁₂H₁₁N₂)₂], the Ni^II cation lies on an inversion centre and has a square‐planar coordination geometry. This transition metal complex is composed of two deprotonated N,N′‐bidentate 2‐[(phenylimino)ethyl]‐1H‐pyrrol‐1‐ide ligands around a central Ni^II cation, with the pyrrolide rings and imine groups lying trans to each other. The Ni—N bond lengths range from 1.894 (3) to 1.939 (2) Å and the bite angle is 83.13 (11)°. The Ni—N(pyrrolide) bond is substantially shorter than the Ni—N(imino) bond. The planes of the phenyl rings make a dihedral angle of 78.79 (9)° with respect to the central NiN₄ plane. The molecules are linked into simple chains by an intermolecular C—H...π interaction involving a phenyl β‐C atom as donor. Intramolecular C—H...π interactions are also present.     

Methyl­malon­amide and ethyl­malon­amide

In the title compounds, C₄H₈N₂O₂, (I), and C₅H₁₀N₂O₂, (II), respectively, the amide groups are rotated out of the central C—C—C plane by ca 76° in (I) and by 70–73° in (II). Compound (I) has crystallographic mirror symmetry perpendicular to the molecular plane.     

Methyl 2‐O‐β‐d‐glucopyranosyl‐α‐l‐rhamnopyranoside

The overall conformation of the title compound, C₁₃H₂₄O₁₀, is described by the glycosidic torsion angles ?_H (H1_g—C1_g—O2_r—C2_r) and ψ_H (C1_g—O2_r—C2_r—H2_r), which have values of 13.6 and 16.1°, respectively. The former is significantly different from the value predicted by consideration of the exo‐anomeric effect (?_H～ 60°) and from that in solution (?_H～ 50°), as determined previously by NMR spectroscopy. An intramolecular O3_r—H?O2_g hydrogen bond may help to stabilize the conformation in the solid state. The orientation of the hydroxy­methyl group of the glucose residue is gauche–gauche, with a torsion angle ω (O5_g—C5_g—C6_g—O6_g) of ?70.4 (4)°. Both pyranose rings are in their expected chair conformations, i.e.⁴C₁ for d ‐glucose and ¹C₄ for l ‐rhamnose.     

The Crystal Structure of (1, 1′-ferrocenediyl)diphenylsilane

The crystal structure of (1,1′-ferrocenediyl)diphenylsilane has been determined from analysis of photographic X-ray data. The crystal system is orthorhombic, a = 14.18(2), b = 12.54(2), c = 9.28(1) Å, space group Pnma with four formula units. The molecule has crystallographic m (C_s) symmetry with atoms Fe and Si lying in the mirror plane, which bisects the two phenyl groups. The planar cyclopentadienyl rings are bridged by a single silicon atom, and are tilted 19.2° with respect to one another. The Fe—C(Cp) distances vary from 2.01(1) to 2.11(1) Å. The bridging angle C(1)—Si—C(1′) is 99.1°, while the Si—C(sp²) bond lengths range from 1.86 to 1.88 Å. The exocyclic C(1)—Si bond makes an angle of 40° with respect to the plane of the cyclopentadienyl ring.