One-dimensional chain structure based on bifurcated hydrogen bonding

The structure of complex [PyH][Ni(mnt)₂], as determined by X-ray single crystal analysis, consists of pyridinium cations and [Ni(mnt)₂]^– anions. Crystallographic data for the complex: monoclinic P2₁/c, a = 16.5430(18) Å, b = 6.3847(9) Å, c = 17.430(2) Å, = 118.040(7)°, V = 1625.4(3) ų, Z = 4. The [Ni(mnt)₂]^– anion is not a planar and the CN groups bend away from the S₄ plane. The interactions between anions and cations via the formation of bifurcated N–H···NC hydrogen bonds give rise to an 1D zigzag chain of alternating cations and anions.     

Two-dimensional nickel(II) tetraaza macrocyclic complex linked by hydrogen bonds

The complex [Ni(L)](PDC) 2H₂O (L = 3,14-dimethyl-2,6,13,17-tetraazatricyclo[16,4, 0^1.18,0^7.12]docosane; PDC = 3,5-pyrazoledicarboxylate) has been synthesized and characterized by X-ray crystallography. It crystallizes in the monoclinic system P2₁/c with a = 9.739(4) Å, b = 10.491(3) Å, c = 16.884(3) Å, = 97.17(2)°, V = 1711.5(8) ų, Z = 4. The coordination environment around the nickel(II) ion exhibits a slightly distorted square-plane with four secondary amines of the macrocycle. The title compound is interconnected to give a two-dimensional network through the hydrogen-bonding interactions.     

Crystal structures of the cobalt(III), nickel(II), copper(II), and zinc(II) complexes of 2-thio-6-picoline N-oxide

Structures of the following compounds have been solved: tris(2-thio-6-picoline N-oxide)cobalt(III), [Co(6MOS)₃], orthorhombic, Pca2₁, a = 17.871(3), b = 14.061(2), c = 15.964(2) Å, V = 4011(1) ų, Z = 8, and = 1.193 mm^–1; bis (2-thio-6-picoline N-oxide)nickel(II), [Ni(6MOS)₂], orthorhombic, Pbca, a = 15.602(8), b = 13.606(4), c = 13.348(8) Å, V = 2833(4) ų, Z = 8, and = 1.655 mm^–1; bis(2-thio-6-picoline N-oxide)copper(II), [Cu(6MOS)₂], orthorhombic, Pbca, a = 13.914(5), b = 12.984(5), c = 15.663(6) Å, V = 2830(2) ų, Z = 8, and = 1.836 mm^–1; and bis(2-thio-6-picoline N-oxide)zinc(II), [Zn(6MOS)₂], triclinic, P – 1, a = 7.9737(8), b = 11.7786(9), c = 7.9206(8) Å, = 104.502(7), = 104.495(8), = 93.445(8)°, V = 691.3(1) ų, Z = 2, and = 2.106 mm^–1. The steric effect of the methyl group in the six-position of the N-oxide ring is considered in comparing these structures to complexes of 2-thiopyridine N-oxide.     

Crystal structure of the addition compound of [Ni(meso-cth)][Cr(ox)2(bpy)](H2O)(ClO4) with weak coordination bonds and hydrogen bonds

A new ionic complex [Ni(meso-cth)][Cr(ox)₂(bpy)](H₂O)(ClO₄) [meso-cth = meso-5,7,7,12,14,14-hexamethyl-1,4,8,11-tetraazacyclotetradecane, ox = oxalato ainon, bpy = 2,2-bipyridine] was prepared and its structure was determined. The complex was found to crystallized in monoclinic space group P2(1)/n, with a = 13.6000(4) Å, b = 18.763(5) Å, c = 14.995(4) Å, =106.958(5)°, V = 3659.9(17) ų, and Z = 4. The structure consisted of cationic [Ni(meso-cth)]²⁺, anionic [Cr(ox)₂(bpy)]^–, and perchlorate anions; the cationic [Ni(meso-cth)]²⁺ and anionic [Cr(ox)₂(bpy)]^– units were related by weak coordination bonds and hydrogen bonds.     

Aquadifluoro(1,10-phenanthroline)copper(II) dihydrate: X-ray crystal structure reveals strong hydrogen bonds between ligand fluoride and lattice water molecules

C₁₂H₁₄CuF₂N₂O₃,M=335.797, monoclinic, space groupP2₁/n,a=6.985(2),b=17.406(2),c=10.581(2) Å,=92.41(2)°,V=1285(1) ų,D _c =1.736 g cm^–3,Z=4,F(000)=684,(CuK)=27.0 cm^–1, =1.5418 Å,T=20°C, crystal dimensions=0.75×0.45×0.30 mm. The structure of the title compound shows it to be [Cu(phen)F₂(H₂O)]·2H₂O with pentacoordinate-square pyramidal Cu(II), short Cu-F bonds [1.890(4) and 1.891(4) Å], and short FH-O hydrogen bonds (ca. 2.68 Å) between the complex and lattice water molecule.     

Heavy metal complexes of macrocyclic trithioethers

We report here two crystal structures of heavy metal complexes containing macrocyclic trithioethers. The trithioether, 10S3 (1,4,7-trithiacyclodecane) complexes Pb(II) to form a compound of the formula [Pb(10S3)](ClO₄)₂(H₂O) (Compound 1). This behavior contrasts the related trithioether 9S3 (1,4,7-trithianonane), which readily forms a bis Pb(II) complex. Crystals of Compound 1 consist of [Pb(10S3)(H₂O)]²⁺ units and perchlorate anions which are weakly bound to the Pb²⁺ center. The two perchlorate anions serve as bidentate ligands to a single lead(II) center. However, a third oxygen in one of the perchlorates also serves as a bridging group between two lead(II) centers, linking the [Pb(10S3)(H₂O)]²⁺ units into zigzag chains. Thus, a highly irregular nine-coordinate (S₃O₆) environment around the Pb²⁺ion is formed by the three sulfur donors from the 10S3 ligand, one coordinated water, and five oxygens from three different perchlorate anions. Also, the lone pair electrons on the Pb center are stereochemically active. Compound 2, [Cd(9S3)₂](ClO₄)₂ 2 CH₃NO₂, forms a distorted octahedral structure with unusual hexakis(thioether) coordination to the Cd(II) center. Bond distances and angles are very comparable to those found in the structure of the tetrafluoroborate salt of the complex cation. (1): P2₁/c, a = 9.1720(6) Å, b = 15.7687(11) Å, c = 11.8427(8) Å, = 93.0180(10) , V = 1710.4 (2) ų, Z = 4; (2): P2₁/c , a = 10.4305(10) Å, b = 15.2059(6) Å, c = 9.4919(7) Å, = 99.324(9), V = 1485.6(2) ų, Z = 2.     

Synthesis and crystal structure of a new two-dimensional chromium(III) network through hydrogen bonds

A new chromium(III) complex, [Cr(ox)(bdmpza)(H₂O)], (ox = oxalate dianion and bdmpza = bis(3,5-dimethylpyrazol-1-yl)acetate, respectively), has been synthesized and characterized by X-ray crystallography. This compound crystallizes in the monoclinic space group P2₁/c, with a = 7.008(3) Å, b = 14.229(5) Å, c = 16.497(7) Å, = 101.588(7)°, V = 1611.5(11) ų, Z = 4. The chromium atom has a distorted octahedral environment with different coordination atoms. Bis(3,5-dimethylpyrazol-1-yl)acetate anion is a tridentate ligand, and the oxalate group acts as a chelating bidentate ligand. This compound also forms an infinite two-dimensional network through O–H O hydrogen bonds. The lengths of the hydrogen bonds are 2.765(5) and 2.733(5) Å, respectively.     

Self-assembly of copper(II) tetraaza macrocyclic complex with cyclohexane-1,3-dicarboxylic acid-5-monocarboxylate linked by hydrogen bond

A novel complex with the composition {[Cu(L)](Cl)(H,H-cdc)(H₂O)} _n (1) (L = 3,14-dimethyl-2,6,13,17-tetraazatricyclo[14,4,0^1.18,0^7.12]docosane; H,H-cdc = cyclohexane-1,3-dicarboxylic acid-5-monocarboxylate) has been synthesized and structurally characterized by X-ray diffraction method. It crystallizes in the monoclinic system P2₁/n with a = 9.507(9), b = 12.624(3), c = 26.922(4) Å, = 96.79(1)°, V = 3208(3) ų, Z = 4. The complex contains a 1D hydrogen-bonded polymeric chain with copper(II) macrocycle and bridging H,H-cdc ligand. The copper(II) coordination geometry is best described as a square-plane with four Cu–N bonds. The weak interaction between copper(II) ion and the chloride ion is also found.     

Copper(II) complexes 1-phenylpropane-1,2-dione- and benzil bis(3-piperidylthiosemicarbazone): A structural study

The crystal and molecular structure of copper(II) complexes of benzil bis(3-piperidylthiosemicarbazone), [Cu(Bnzpip)] and 1-phenylpropane-1,2-dione bis(3-piperidylthiosemicarbazone), [Cu(Pmpip)] have been determined. [Cu(Bnzpip)] is monoclinic, space group P2₁/n with a = 13.9375(10) Å, b = 11.6621(4) Å, c = 16.4710(10) Å, = 100.667(2)°, and V = 2630.9(3) ų with Z = 4, for d _calc = 1.399 g/cm³. [Cu(Pmpip)] is also monoclinic, space group P2₁/n with a = 11.292(6) Å, b = 10.219(5) Å, c = 20.292(6) Å, = 101.50(3)°, and V = 2295(2) ų with Z = 4, for d _calc = 1.525 g/cm³. Both complexes involve N₂S₂ coordination, are relatively planar except for the phenyl rings and have similar bond distances and angles to copper(II) complexes of other 3-piperidylthiosemicarbazones.     

Bis[aqua(2,5-bis(4-pyridyl)-1,3,4-oxadiazole)thiocyanate] cadmium(II): A three-dimensional framework built from hydrogen bonds and π-π stacking interactions

A three-dimensional (3D) network complex [Cd(L)₂(NCS)₂(H₂O)₂], L being 2,5-bis(4-pyridyl)-1,3,4-oxadiazole, has been synthesized and structurally determined by X-ray diffraction analysis: triclinic, space group P-1 with a = 7.8863(9) Å, b = 8.6287(10) Å, c = 11.4696(12) Å, = 94.346(2)°, = 109.331(2)°, = 94.354(2)°, Mr = 713.04, V = 730.13(14) ų, Z = 1. The crystal structure of the title complex reveals that it is a neutral molecule and the Cd(II) ion is at the center of symmetry. Each Cd(II) is six-coordinated and the CdN₄O₂ coordination sphere can be considered as an octahedron. The most striking feature of this complex resides in the formation of a 3D network through hydrogen bonds and - stacking interactions.     

Synthesis and crystal structure of a macrocyclic azidotetraamine copper(II) complex

The complex [Cu(L)N₃](H₂O)(ClO₄) (1) (L = 3,14-dimethyl-2,6,13,17-tetraazatricyclo[14,4,0^1.18, 0^7.12]docosane) has been prepared and characterized by X-ray crystallography. 1 crystallizes in the monoclinic space group P2₁/c, with a = 8.907(5), b = 20.036(3), c = 14.773(2) Å, = 103.78(2)°, V = 2560.6(15) ų, and Z = 4. The coordination geometry around the Cu(II) ion is a distorted square-pyramidal with four nitrogen atoms of the macrocycle and one nitrogen atom of the axial azido group.     

Self-assembly in transition metal complexes: structural characterization of a copper histamine nitrate [Cu(II)(him)2(NO3)2]

A new monomeric copper (II) complex with histamine (him), [Cu(II)(him)₂(No₃)₂], has been prepared by the reaction of Cu(NO₃)₂ with histaminium dichloride and its structure was determined by x-ray crystallography. The complex crystallizes in the triclinic system, space group with a = 5.7238(4), b = 8.7094(7), c = 9.2481(11) Å, = 69.693(8), = 73.242(7), = 71.050(7)°, V = 400.84(6) ų, and Z = 1. The structure consists of discrete [Cu(II)(him)₂(NO₃)₂] molecules in which the metal atom is centrosymmetrically coordinated by two histamine ligands forming an equatorial plane with Cu–N(imidazole ring) being 2.032(2) and Cu–N(NH₂ group) being 2.023(2) Å. Two O atoms from nitrate anions coordinate on the elongated axial positions with Cu–O being 2.549(2) Å. In the crystal structure, the molecules are organized by hydrogen bonds forming a two-dimensional network.     

Crystal structure of a one-dimensional ladder-shape CoII complex through hydrogen bonds with an amino-acid-like ligand 1,5-diazacyclooctane-N,N′-diacetate acid

The crystal structure of a one-dimensional ladder-shape complex [CoL(H₂O)]·2H₂O, (L being 1,5-diazacyclooctane-N,N-diacetate acid), has been determined by X-ray diffraction analysis: monoclinic, space group P2₁/c with a = 14.406(4) Å, b = 7.380(2) Å, c = 14.594(5) Å, = 112.685(2)°, M _r = 341.23, V = 1431.5(8) ų, Z = 4. The Co^II center is penta-coordinated by two O atoms of the carboxylic pendant arms, two nitrogen donors of the 1,5-diazacyclooctane (DACO) moiety, and a water molecule. The coordination geometry of Co^II could be described as a distorted square pyramid and the DACO backbone adopts a normal boat/chair conformation. The complex forms a one-dimensional ladder-shape structure through inter- and intra-molecular O—H···O hydrogen bonds.     

Crystal structures of (I) 2-(9,9-dipropylfluorene-2-yl)-9,9- dipropylfluorene and (II) 2-(1,1-dimethylpropyl)-7- {4-[(1,1-dimethylpropyl)-9,9-diethylfluoren-2-yl]phenyl}-9,9-diethylfluorene and (III) 2-(4-ethylphenyl) -7-[7-(ethylphenyl)-9,9-dipropylfluoren-2-yl]-9,9-dipropylfluorene

The crystal structures of the three fluorene related molecules, (I) 2-(9,9-dipropylfluorene-2-yl)-9,9-dipropylfluorene, [Exalite 384, C₃₈H₄₂], (II) 2-(1,1-dimethylpropyl)-7-{4-[(1,1-dimethylpropyl)-9,9-diethylfluoren-2-yl] phenyl}-9,9-diethylfluorene, [Exalite 404, C₅₀ H₅₈], and (III) 2-(4-ethylphenyl)-7-[7-(ethylphenyl)-9,9-dipropylfluoren-2-yl]-9,9-dipropylfluorene, [Exalite 416, C₅₄H₅₈], have been determined. Structural details reveal a novel new bonding arrangement at the C2 atoms of symmetry-related fluorene moieties in all three molecules producing a linear type array with an inversion center connecting adjacent asymmetric units within each molecule. Exalite 384 is monoclinic, space group P2₁/c with a = 9.002(2) Å, b = 16.275(4) Å, c = 10.525(1) Å, = 103.05(1), and V = 1502.1(5) ų with Z = 4, for d _calc = 1.103 g/cm³. Exalite 404 is triclinic, space group P1 with a = 10.383(1) Å, b = 13.404(2) Å, c = 7.7007(9) Å, = 105.296(9), = 104.23(1), = 73.707(9), and V = 974.9(2) ų with Z = 2, for d _calc = 1.141. Exalite 416 is monoclinic, space group P2₁/c with a = 15.99(10) Å, b = 11.178(8) Å, c = 23.766(4) Å, = 104.21(4), and V = 4117(4) ų with Z = 4, for d _calc = 1.141 g/cm³.     

Synthesis and crystal structure of Schiff base transition metal complex [Co(PMBP-smdtc)2]⋅2H2O

A cobalt(II) complex, [Co(PMBP-smdtc)₂]2H₂O, in which PMBP-smdtc is the l-phenyl-3-methyl-4-benzoyl-5-pyrazolone Schiff base of S-methyldithiocarbazate, has been synthesized and characterized by IR spectrum and single crystal X-ray diffraction. The crystal is monoclinic: space group C2/c, with a = 12.455(2) Å, b = 16.024(2) Å, c = 20.513(3) Å, = 101.18(1)°, V = 4016.3(10) ų, and Z = 4. The cobalt ion is octahedrally coordinated by two tridentate Schiff base ligands with ONS donor atoms. The molecules are bridged together by two water molecules through H-bond along b axis and one-dimensional indented chain structure is formed.     

Synthesis and crystal structure of [Cu(azpy)(H2O)4][Cu2(nta)2(azpy)]····6H2O: A two-dimensional network solid

The copper(II) complex [Cu(azpy)(H₂O)₄][Cu₂(nta)₂(azpy)]····6H₂O (nta = nitrilotriacetate, azpy = 4,4-azobispyridine) has been synthesized and structurally characterized. It crystallizes in the triclinic space group P , a = 8.6985(3) Å, b = 9.4776(3) Å, c = 14.6544(5) Å, = 71.5360(10)°, = 85.7600(10)°, = 88.1420(10)°, V = 1142.74(7) ų, Z = 1. The crystal structure consists of one-dimensional linear chain cations and dimeric anions. The copper centers in the anion possess distorted trigonal bipyramidal geometry, while Cu(2) has a distorted octahedral geometry in the cation. Coordinated water molecules in the one-dimensional chain form interionic hydrogen bonds with the oxygen atoms of the carboxylate of nta of the dimmer anion. These hydrogen bonds result in the formation of a two-dimensional network.     

Synthesis and crystal structure of bis(2,2′-bipyridyl)mononitritozinc(II) perchlorate. An example of a six-coordinate cis-octahedral ZnN4O2 chromophore

The crystal structure of bis(2,2-bipyridyl)mononitritozinc(II) perchlorate, [Zn(bipy)₂ (ONO)][ClO₄] (1) has been determined. The complex is monoclinic, with a = 10.9195(4) Å, b = 12.2320(5) Å, c = 16.5477(8) Å, = 105.6150(10), P2₁/n space group, with final R1 = 0.0657 and wR2 = 0.1630. The complex involves a [Zn(bipy)₂ (ONO)]⁺ cation and a [ClO₄]^– anion. The ZnN₄O₂ chromophore is six-coordinate, with a cis-distortion of the two oxygens of the nitrite, O(1) and O(2), at distances 2.216(5) and 2.197(5) Å from the zinc (Zn– O _mean = 2.206(5) Å, O = 0.019(5) Å) and two out of plane Zn–N bonds, Zn–N(2) and Zn–N(3), at 2.129(4) and 2.135(4) Å (Zn–n _mean/out = 2.132(4) Å, n _2,3 = 0.006(4) Å). The two inplane nitrogens, N(1) and N(4), at distances Zn–N(1) = 2.090(4) and Zn–N(4) = 2.085(4) Å (Zn–n _mean/in = 2.087(4) Å, n _1,4 = 0.005(4) Å) are greater than 2.0 Å, but slightly shorter than the axial bonds. The inplane angles ₁, ₂, and ₃ in 1 have values 150.33(18), 108.98(17), and 99.73(18) respectively. The stereochemistry is cis-distorted octahedral, with an ₃ = 99.37(18), which is lower than ₃ = 103.4(1) observed in [Zn(bipy)₂(ONO)][NO₃] (5). Comparison with the corresponding [Cu(bipy)₂(ONO)][Y] complexes suggested that the cis-distortion of the CuN₄O₂ chromophore in the copper(II) series does not originate in the Jahn–Teller or pseudo-Jahn–Teller effect.     

Structures of divalent transition metal salts of 4-aminonaphthalene-1-sulfonate: unexpected variations in layering pattern

Salts of 4-aminonaphthalene-1-sulfonate with divalent Mg, Mn, Co, and Ni cations have been crystallized and their structures determined by single crystal X-ray methods. The Mg and Mn salts are isostructural. Crystal data for hexa-aquamagnesium(II) 4-aminonaphthalene-1-sulfonate dihydrate, [Mg(H₂O)₆](H₂NC₁₀H₆SO₃)₂ 2H ₂O: monoclinic, P2₁/c, Z = 2, a = 8.622(3), b = 7.043(3), c = 23.178(3) Å, =93.78(2)°, V = 1404.3(7) ų; hexa-aquamanganese(II) 4-aminonaphthalene-1-sulfonate dihydrate, [Mn(H₂O)₆](H₂NC₁₀H₆SO₃)₂ 2H ₂O: monoclinic, P2₁/c, Z = 2, a = 8.652(3), b = 7.031(4), c = 23.402(2) Å, =93.09(2)°, V = 1421.5(9) ų. The structures are composed of alternating layers of octahedral metal–aqua complexes and sulfonate anions linked by an extensive network of hydrogen bonds. The extra water molecules of crystallization are located in the hexa-aquametal cation layers. The repeat unit along the c axis is a double layer. The Co and Ni compounds are isostructural with each other, but compared to the Mg and Mn compounds, have a strikingly different structure. Crystal data for hexa-aquacobalt(II) 4-aminonaphthalene-1-sulfonate trihydrate, [Co(H₂O)₆](H₂NC₁₀H₆SO₃)₂ 3H ₂O: orthorhombic, Pbca, Z = 8, a = 8.518(1), b = 14.327(2), c = 45.367(6) Å, V = 5536(1) ų; hexa-aquanickel(II) 4-aminonaphthalene-1-sulfonate trihydrate, [Ni(H₂O)₆](H₂NC₁₀H₆SO₃)₂ 3H ₂O: orthorhombic, Pbca, Z = 8, a = 8.4976(6), b = 14.288(1), c = 45.076(3) Å, V = 5472.9(7) ų. These structures also contain layers of octahedral hexa-aquametal complexes and additional water molecules of crystallization sandwiched by layers of sulfonate anions, however the stacking pattern is more complex with a quadruple layer repeat unit and two different types of anion layers.     

Crystal structure of a macrocyclic tetraamine isocyanato zinc(II) complex

The complex, [Zn(L)(NCO)]Cl · 3H₂O (1) (L = 3,14-dimethyl-2,6,13,17-tetraazatricyclo[14,4,0^1.18,0^7.12]docosane), has been synthesized and structurally characterized. 1 crystallizes in the monoclinic system, space group P2₁/n with a = 10.530(3), b = 9.315(2), c = 27.188(3) Å, = 92.58(1)°, V = 2664.1(9)ų, and Z = 4. The zinc atom is in a distorted squarepyramidal environment with the four nitrogen atoms of the macrocycle and one nitrogen atom of the isocyanate ligand.     

Structure of bis(2-amino-5-methylpyridinium) tetrachlorozincate at 298 and 150 K

Reaction of 2-amino-5-methylpyridine with zinc chloride and HCl in aqueous solution yields bis(2-amino-5-methylpyridinium) tetrachlorozincate. The complex crystallizes in the monoclinic space group P2₁/c, with minimal tetrahedral distortion of the ZnCl₄ ^2– ion at both 298 and 150 K; at 298 K, a = 8.090(2) Å, b = 14.795(6) Å, c = 15.850(4) Å, = 101.93 (2); at 150 K, a = 8.0986(2) Å, b = 14.7190(5) Å, c = 15.7684(7) Å, = 102.862(2). The anisotropic cell contraction results in significant changes in nonbonding Cl Cl contacts.