The interaction of water with Ni(111) and H/Ni(111) studied by TPD and HREELS

We have used temperature-programmed desorption in combination with specular and off-specular high resolution electron energy loss spectroscopy to study the interaction of H(2)O and D(2)O with the bare and hydrogen-covered Ni(111) surface. Our results for the bare metal surface agree with previous reports and we are able to relate two prominent features in vibrational spectra to nuclear motions at the surface. Pre-covering Ni(111) with hydrogen alters both adsorption and desorption of water significantly. The strong H-Ni bond does not allow for isotopic exchange with co-adsorbed D(2)O. Strong resemblance of desorption traces and vibrational spectra of submonolayer coverages on H-covered Ni(111) and multilayers on bare Ni(111) suggests that adsorption of hydrogen makes this nickel surface hydrophobic.     

CO-NO and CO-O(2) interactions on Cu(100) between 25 and 200 K studied with infrared reflection absorption spectroscopy

Infrared reflection absorption spectroscopy (IRAS) has been used to study CO-NO and CO-O(2) interactions on Cu(100) between 25 and 200 K. A strong repulsive interaction between CO and NO on Cu(100) at 25 K causes tilting of the CO molecules away from the surface normal and a blue-shift of the CO vibrational frequency. Upon warming and decomposition of the NO, the CO molecules return to a bonding position normal to the surface plane. The vibrational frequency of CO blue-shifts from 2087 to 2136 cm(-1) upon coadsorption with N and O atoms formed from NO decomposition. On the other hand, the interaction of CO with O(2) at 27 K on Cu(100) in the submonolayer regime induces a red-shift of the CO vibrational frequency. Atomic oxygen, formed on Cu(100) by dissociation of O(2) at 95 K, induces a blue-shift of the vibrational frequency of coadsorbed CO to 2116 cm(-1). The CO vibrational frequency shifts to 2091 cm(-1) when the surface is annealed to 140 K, implying a change in the adsorption geometry of the oxygen atoms on Cu(100).     

Initial growth of the water layer on (1 x 1)-oxygen-covered Ru(0001) in comparison with that on bare Ru(0001)

The initial growth of a water (D2O) layer on (1 x 1)-oxygen-covered Ru(0001) has been studied in comparison with that on bare Ru(0001) by means of temperature-programmed desorption (TPD) and infrared reflection absorption spectroscopy (IRAS). Although water molecules adsorbed on both bare and (1 x 1)-oxygen-covered Ru(0001) commonly tend to form hydrogen bonds with each other when mobility occurs upon heating, the TPD and IRAS measurements for the two surfaces exhibit distinct differences. On (1 x 1)-oxygen-covered Ru(0001), most of the D2O molecules were desorbed with a peak at 160 K, even at submonolayer coverage, as condensed water desorption. The vibration spectra of adsorbed D2O also showed broad peaks such as a condensed water phase, from the beginning of low coverage. For submonolayer coverage, in addition, we found a characteristic O-D stretching mode at around 2650 cm(-1), which is never clearly observed for D2O on bare Ru(0001). Thus, we propose a distinctive water adsorption structure on (1 x 1)-oxygen-covered Ru(0001) and discuss its influence on water layer growth in comparison with the case of D2O on bare Ru(0001).     

Adsorption kinetics of n-nonyl-beta-D-glucopyranoside at the air-water interface studied by infrared reflection absorption spectroscopy

The adsorption of the surfactant n-nonyl-beta-D-glucopyranoside at the air-water interface after injection of the surfactant into the subphase was studied by infrared reflection absorption spectroscopy. In the first part, we investigated the equilibrium adsorption of n-nonyl-beta-D-glucopyranoside and the Gibbs adsorption isotherm was measured by applying the film balance technique. In the second part, the adsorption kinetics was followed by changes in the surface pressure and in the intensities of the OH band, which is related to the layer thickness, and the CH(2) antisymmetric stretching vibrational band. During an induction period, when the molecules are still highly diluted and the surface pressure is low, they are oriented parallel to the air-water interface. IR band simulations for the CH(2) antisymmetric stretching vibrational band support the idea of horizontally oriented molecules at the air-water interface. Later on, when more molecules are adsorbed to the air-water interface, they suddenly rearrange to an upright orientation as indicated by changes of the OH and the CH(2) bands. The observations are discussed in comparison to results obtained for the adsorption kinetics of n-decyl-beta-D-maltopyranoside, n-dodecyl-beta-D-maltopyranoside, and sodium dodecyl sulfate.     

Photoisomerization of azobenzene derivatives confined in gold nanoparticle aggregates

Photoisomerization is an important reaction that confers photoresponsive functionality on nanoparticles. Although photoisomerization of molecules forming self-assembled monolayers on two-dimensional surfaces or three-dimensional clusters has been studied, a detailed picture of interactions of molecules undergoing isomerization with nanoparticles is not available. In this paper, we report on the photoisomerization of azobenzene derivatives spatially confined in gold nanoparticle (AuNP) aggregates. AuNP aggregates allow us to simultaneously probe the structural changes of molecules via surface-enhanced Raman spectroscopy (SERS) and the accompanying changes in interparticle interactions via surface plasmon couplings. AuNP aggregates are formed by the adsorption of synthesized azobenzene-derivatized sulfides (Az) onto the surfaces of AuNPs. The photoisomerization of the adsorbed Az from trans to cis by excitation at 365 nm causes the AuNPs to move close to each other in the aggregates, leading to a redshift of the surface plasmon coupling band in the UV-vis spectra and a concomitant rise in SERS intensity. SERS spectra reveal that the vibrational modes containing the N=N stretching character redshift upon irradiation, suggesting that the N=N bond is significantly weakened when Az is in the cis form in the AuNP aggregates. The weakening of the N=N bond is attributed to the interaction of the N=N bond, which is more exposed to the outside in the cis conformation, with the nearby AuNPs that have come closer by the isomerization of adsorbed Az. We find that backisomerization from cis to trans occurs much faster in the AuNP aggregates (k = 1.9 × 10(-2) min(-1)) than in solution (k = 1.3 × 10(-3) min(-1)) because of the reduced N=N bond order of cis-Az in the aggregates.     

Crystal-face-selective adsorption of Au nanoparticles onto polycrystalline diamond surfaces

Crystal-face-selective adsorption of Au nanoparticles (AuNPs) was achieved on polycrystalline boron-doped diamond (BDD) surface via the self-assembly method combined with a UV/ozone treatment. To the best of our knowledge, this is the first report of crystal-face-selective adsorption on an inorganic solid surface. Hydrogen-plasma-treated BDD samples and those followed by UV/ozone treatment for 2 min or longer showed almost no adsorption of AuNP after immersion in the AuNP solution prepared by the citrate reduction method. However, the samples treated by UV/ozone for 10 s showed AuNP adsorption on their (111) facets selectively after the immersion. Moreover, the sample treated with UV/ozone for 40-60 s showed AuNP adsorption on the whole surface. These results indicate that the AuNP adsorption behavior can be controlled by UV/ozone treatment time. This phenomenon was highly reproducible and was applied to a two-step adsorption method, where AuNPs from different batches were adsorbed on the (111) and (100) surface in this order. Our findings may be of great value for the fabrication of advanced nanoparticle-based functional materials via bottom-up approaches with simple macroscale procedures.     

Co-adsorption of water and hydrogen on Ni(111)

We have studied the surface coverage dependence of the co-adsorption of D and D(2)O on the Ni(111) surface under UHV conditions. We use detailed temperature-programmed desorption studies and high resolution electron energy loss spectroscopy to show how pre-covering the surface with various amounts of D affects adsorption and desorption of D(2)O. Our results show that the effects of co-adsorption are strongly dependent on D-coverage. In the deuterium pre-coverage range of 0-0.3 ML, adsorption of deuterium leaves a fraction of the available surface area bare for D(2)O adsorption, which shows no significant changes compared to adsorption on the bare surface. Our data indicate phase segregation of hydrogen and water into islands. At low post-coverages, D(2)O forms a two-phase system on the remaining bare surface that shows zero-order desorption kinetics. This two phase system likely consists of a 2-D solid phase of extended islands of hexamer rings and a 2-D water gas phase. Increasing the water post-dose leads at first to 'freezing' of the 2-D gas and is followed by formation of ordered, multilayered water islands in-between the deuterium islands. For deuterium pre-coverages between 0.3 and 0.5 ML, our data may be interpreted that the water hexamer ring structure, (D(2)O)(6), required for the formation of an ordered multilayer, does not form anymore. Instead, more disordered linear and branched chains of water molecules grow in-between the extended, hydrophobic deuterium islands. These deuterium islands have a D-atom density in agreement with a (2x2)-2D structure. The disordered water structures adsorbed in-between form nucleation sites for growth of 3-D water structures. Loss of regular lateral hydrogen bonding and weakened interaction with the substrate reduces the binding energy of water significantly in this regime and results in lowering of the desorption temperature. At deuterium pre-coverages greater than 0.5 ML, the saturated (2x2)-2D structure mixes with (1x1)-1D patches. The mixed structures are also hydrophobic. On such surfaces, submonolayer doses of water lead to formation of 3-D water structures well before wetting the entire hydrogen-covered surface.     

Water adsorption on Rh(111) at 20 K: from monomer to bulk amorphous ice

The adsorption of water (D(2)O) molecules on Rh(111) at 20 K was investigated using infrared reflection absorption spectroscopy (IRAS). At the initial stage of adsorption, water molecules exist as monomers on Rh(111). With increasing water coverage, monomers aggregate into dimers, larger clusters (n = 3-6), and two-dimensional (2D) islands. Further exposure of water molecules leads to the formation of three-dimensional (3D) water islands and finally to a bulk amorphous ice layer. Upon heating, the monomer and dimer species thermally migrate on the surface and aggregate to form larger clusters and 2D islands. Based on the temperature dependence of OD stretching peaks, we succeeded in distinguishing water molecules inside 2D islands from those at the edge of 2D islands. From the comparison with the previous vibrational spectra of water clusters on other metal surfaces, we conclude that the number of water molecules at the edge of 2D islands is comparable with that of water molecules inside 2D islands on the Rh(111) surface at 20 K. This indicates that the surface migration of water molecules on Rh(111) is hindered as compared with the cases on Pt(111) and Ni(111) and thus the size of 2D islands on Rh(111) is relatively small.     

In situ monitoring of protein adsorption on a nanoparticulated gold film by attenuated total reflection surface-enhanced infrared absorption spectroscopy

In situ surface enhanced infrared absorption spectroscopy (SEIRAS) with an attenuated total reflection (ATR) configuration has been used to monitor the adsorption kinetics of bovine hemoglobin (BHb) on a Au nanoparticle (NP) film. The IR absorbance for BHb molecules on a gold nanoparticle film deposited on a Si hemispherical optical window is about 58 times higher than that on a bare Si optical window and the detection sensitivity has been improved by 3 orders of magnitude. From the IR signal as a function of adsorption time, the adsorption kinetics and thermodynamics can be explored in situ. It is found that both the electrostatic interaction and the coordination bonds between BHb residues and Au NP film surface affect the adsorption kinetics. The maximum adsorption can be obtained in solution pH 7.0 (close to the isoelectric point of the protein) due to the electrostatic interaction among proteins. In addition, the isotherm of BHb adsorption follows well the Freundlich adsorption model.     

Piperidine adsorption on hydrated alpha-alumina (0001) surface studied by vibrational sum frequency generation spectroscopy

The adsorption of piperidine vapor on the hydrated alumina (alpha-Al2O3, corundum) (0001) surface was investigated using vibrational broad bandwidth and scanning sum frequency generation (SFG) spectroscopy. The interfacial vibrational signature in the C-H stretching region of piperidine at the alumina (0001) surface is shown to be a sensitive spectroscopic probe revealing the adsorption mechanism. The neat piperidine surface, aqueous piperidine surface, and aqueous piperidium chloride surface were also investigated in the C-H stretching region by SFG to establish vibrational reference frequencies. After piperidine adsorption, piperidine vapor was removed and piperidine was found to be chemisorbed onto the alumina (0001) surface through protonation by surface hydroxyl groups. The O-H stretching region of the alumina surface before and after piperidine adsorption was also investigated, and the results revealed the decrease of the surface number density of alumina surface hydroxyl groups.     

Vibrational dynamics of DNA. II. Deuterium exchange effects and simulated IR absorption spectra

In Paper I, we studied vibrational properties of normal bases, base derivatives, Watson-Crick base pairs, and multiple layer base pair stacks in the frequency range of 1400-1800 cm(-1). However, typical IR absorption spectra of single- and double-stranded DNA have been measured in D(2)O solution. Consequently, the more relevant bases and base pairs are those with deuterium atoms in replacement with labile amino hydrogen atoms. Thus, we have carried out density functional theory vibrational analyses of properly deuterated bases, base pairs, and stacked base pair systems. In the frequency range of interest, both aromatic ring deformation modes and carbonyl stretching modes appear to be strongly IR active. Basis mode frequencies and vibrational coupling constants are newly determined and used to numerically simulate IR absorption spectra. It turns out that the hydration effects on vibrational spectra are important. The numerically simulated vibrational spectra are directly compared with experiments. Also, the (18)O-isotope exchange effect on the poly(dG):poly(dC) spectrum is quantitatively described. The present calculation results will be used to further simulate two-dimensional IR photon echo spectra of DNA oligomers in the companion Paper III.     

Density functional theory (DFT) and DRIFTS investigations of the formation and adsorption of enolic species on the Ag/Al2O3 surface

Molecular structure and vibrational frequencies of the novel surface enolic species intermediate on Ag/Al2O3 have been investigated by means of density functional theory (DFT) calculations and in situ infrared spectroscopy. The geometrical structures and vibrational frequencies were obtained at the B3P86 levels of DFT and compared with the corresponding experimental values. Theoretical calculations show that the calculated IR spectra are in good agreement with the experimental spectroscopic results. In addition, the adsorption energy of enolic species on the Ag/Al2O3 catalyst surface was also evaluated. The reaction mechanism from C2H5OH to enolic species on Ag/Al2O3 catalyst was proposed.     

氧在CuCl(111)表面吸附的密度泛函理论研究

运用广义梯度密度泛函理论的PW91方法结合周期平板模型,在DNP基组下研究了氧分子和氧原子在CuCl(111)表面上的吸附.对氧分子在CuCl(111)表面吸附的相关计算和比较发现,覆盖度为0.25单层时的吸附构型为稳定的吸附构型,氧分子倾斜地吸附在CuCl(111)表面的顶位时比较稳定,吸附后O2分子的伸缩振动频率与自由O2分子相比发生了红移.态密度和Mulliken电荷布居分析结果表明,整个吸附体系发生了由Cu原子向O2分子的电荷转移.氧原子在CuCl(111)表面吸附的计算结果表明,氧原子倾向于以穴位(hollow)吸附在CuCl(111)表面,通过Mulliken电荷布居和态密度分析对氧原子在CuCl表面的吸附行为作了进一步探讨.     

Adsorption kinetics, orientation, and self-assembling of N-acetyl-L-cysteine on gold: a combined ATR-IR, PM-IRRAS, and QCM study

The adsorption of N-acetyl-L-cysteine from ethanol solution on gold has been studied by in situ attenuated total reflection infrared (ATR-IR) spectroscopy, polarization modulation infrared reflection absorption spectroscopy, and a quartz crystal microbalance. After an initial fast adsorption, in situ ATR-IR revealed two considerably slower processes, besides further adsorption. The appearance of carboxylate bands and the partial disappearance of the carboxylic acid bands demonstrated that part of the molecules on the surface underwent deprotonation. In addition, the C=O stretching vibration of the carboxylic acid group shifted to lower and the amide II band to higher wavenumbers, indicating hydrogen-bonding interactions within the adsorbate layer. Based on the initial ATR-IR spectrum, which did not reveal deprotonation, the orientation of the molecule within the adsorbate layer was determined. For this, density functional theory was used to calculate the transition dipole moment vectors of the vibrational modes of N-acetyl-l-cysteine. The projections of the latter onto the z-axis of the fixed surface coordinate system were used to determine relative band intensities for different orientations of the molecule. The analysis revealed that the amide group is tilted with respect to and points away from the surface, whereas the carboxylic acid is in proximity to the surface, which is also supported by a shift of the C-O-H bending mode. This position of the acid group favors its deprotonation assisted by the gold surface and easily enables intermolecular interactions. Periodic acid stimuli revealed reversible protonation/deprotonation of part of the adsorbed molecules. However, only non-hydrogen-bonded carboxylic acid groups showed a response toward the acid stimuli.     

Ideal nonideality in adsorption of 2-aminoethanethiol and 2-mercaptoethane sulfonic acid to form electrostatically stabilized binary self-assembled monolayers on Au(111)

In formation of binary self-assembled monolayers (SAMs) composed of 2-aminoethanethiol (AET) and 2-mercaptoethane sulfonic acid (MES) by adsorption from an ethanol solution on Au(111), the adsorption shows nearly ideal nonideality in that the surface ratio of MES to AET in the SAM is unity and does not depend on the mixing ratio of MES to AET in the bathing ethanol solution used for preparing SAMs, chi(soln)MES, over the wide range of chi(soln)MES between 0.01 and 0.95. X-ray photoelectron spectroscopy confirms that at least 80% of AET molecules adsorbed are protonated in this range of chi(soln)MES, indicating that the electrostatic interaction between positively charged AET and negatively charged MES is responsible to the observed nonideality. Correspondingly, there appears only one cathodic peak in a linear-sweep voltammogram of the reductive desorption of the SAM, having a narrow full width at half-maximum of about 20 mV. This suggests the presence of strong lateral attractive interaction between the adsorbed thiolates.     

Investigations of the structure of H2O clusters adsorbed on TiO2 surfaces by near-infrared absorption spectroscopy

The overtone and combination bands of the fundamental vibration modes (nu(1), symmetric stretching; nu(2), bending; and nu(3), asymmetric stretching) attributed to the H(2)O molecules adsorbed on a TiO(2) surface could be observed in the near-infrared (NIR) region. Especially, two absorption bands attributed to the combination (nu(2) + nu(3)) and (nu(1) + nu(3)) modes of the H(2)O molecules adsorbed on the TiO(2) surface were observed at around 1940 and 1450 nm, respectively. From detailed investigations on the (nu(2) + nu(3)) combination band, it was found that H(2)O molecules absorbed on a TiO(2) surface aggregate to form clusters due to the high surface tension of H(2)O arising from the intermolecular hydrogen bonds, and the hydrogen-bonded H(2)O in the bulk part of the cluster and the hydrogen-bond-free H(2)O in the outside spherical part of the cluster could be easily distinguished. Furthermore, it was quantitatively confirmed that the relaxation of the surface energy accompanying the adsorption of H(2)O on the TiO(2) surface stabilized the adsorption states of the hydrogen-bonded H(2)O molecules, while on the other hand, the hydrogen-bond-free H(2)O molecules became unstable as compared to the liquid-phase H(2)O molecules.     

NaBH4-induced assembly of immobilized Au nanoparticles into chainlike structures on a chemically modified glass surface

A facile method of obtaining chainlike assemblies of gold nanoparticles (AuNPs) on a chemically modified glass surface based on NaBH(4) treatment is developed. Citrate-stabilized AuNPs (17 nm) are immobilized on a glutaraldehyde-functionalized glass surface and assembled into chainlike structures after treatment with aqueous sodium borohydride (NaBH(4)) solution. The production and morphology of the AuNP chainlike assemblies are controlled by the density of the immobilized NPs, the concentration of NaBH(4) solution, and the treatment time. The AuNP assemblies are stable in water and can undergo drying. X-ray photoelectron spectroscopic data show that the number of citrate ions on the AuNPs decreased by 43% after treatment with 5 mg/mL NaBH(4) solution. The NaBH(4)-induced partial removal of the citrate ions and the roughness of the glass surface greatly affect the binding force of AuNPs on the substrate. The immobilized AuNPs begin to move at the solid-liquid interface without desorbing when the strength of the binding force was decreased. These mobile NPs form chainlike assemblies under the driving force of van der Waals interaction and diffusion. This interface-based formation of chainlike assemblies of AuNPs may provide a simple protocol for the 1D assembly of other Au-coated colloidal nanoparticles.     

Dual-frequency 2D IR on interaction of weak and strong IR modes

Dual-frequency 2D IR heterodyne photon-echo spectroscopy of C[triple bond]N and C=O stretching vibrational modes in 2-cyanocoumarin is reported. We have shown that the interaction among these modes provides convenient and useful structural constraints for molecules. Implementation of two pulse sequences, 4, 4, and 6 microm and 6, 6, and 4 microm, allowed the clear determination of contributions caused by vibrational relaxation. Positive correlation between C[triple bond]N and C=O frequency distributions was observed in 2-cyanocoumarin. Because C[triple bond]N modes are highly localized and have frequencies in a spectral region with minimal water absorption, the C[triple bond]N/C=O interactions have a strong potential for use as structural reporters in proteins. In addition to CN/CO peaks, the cross-peaks responsible for the C[triple bond]N/C=C interaction are also observed in the 2D IR spectra, where C=C is a coumarin ring stretching mode. We have demonstrated that 2D IR spectroscopy can utilize interactions of strong IR modes with weak local modes as structural reporters.     

Intermolecular Hydrogen Bonds Formed Between Amino Acid Molecules in Aqueous Solution Investigated by Temperature-jump NanosecondTime-resolved Transient Mid-IR Spectroscopy

Carboxyl (COO?) vibrational modes of two amino acids histidine and glycine in D2O solution were investigated by temperature-dependent FTIR spectroscopy and temperature-jump nanosecond time-resolved IR di?erence absorbance spectroscopy. The results show that hydrogen bonds are formed between amino acid molecules as well as between the amino acid molecule and the solvent molecules. The asymmetric vibrational frequency of COO? around 1600-1610 cm?1 is blue shifted when raising temperature, indicating that the strength of the hydrogen bonds becomes weaker at higher temperature. Two bleaching peaks at 1604 and 1612 cm?1 were observed for histidine in response to a temperature jump from 10 ±C to 20 ±C. The lower vibrational frequency at 1604 cm?1 is assigned to the chain COO? group which forms the intermolecular hydrogen bond with NH3+ group, while the higher frequency at 1612 cm?1 is assigned to the end COO? group forming hydrogen bonds with the solvent molecules. This is because that the hydrogen bonds in the former are expected to be stronger than the latter. In addition the intensities of these two bleaching peaks are almost the same. In contrast, only the lower frequency at 1604 cm?1 bleaching peak has been observed for glycine. The fact indicates that histidine molecules form a dimer-like intermolecular chain while glycine forms a relatively longer chain in the solution. The rising phase of the IR absorption kinetics in response to the temperature-jump detected at 1604 cm?1 for histidine is about 30§10 ns, within the resolution limit ofour instrument, indicating that breaking or weakening the hydrogen bond is a very fast process.