Effect of Catalase on Biocatalytic Synthesis of Pyruvate by Enzymes from Pseudomonas sp.

Pyruvate was produced from DL-lactate by a kind of green-chemical biocatalyst --cell-free extract from bacterial strain Pseudomonas sp. SM-6. Catalase in cell-free extract, whichcould stabilize the pyruvate formed by lactate oxidase, played an important role in pyruvatepreparation. The effect of catalase in conversion process was evaluated.     

Biocatalytic enantioselective synthesis of N-substituted aspartic acids by aspartate ammonia lyase

The gene encoding aspartate ammonia lyase (aspB) from Bacillus sp. YM55-1 has been cloned and overexpressed, and the recombinant enzyme containing a C-terminal His(6) tag has been purified to homogeneity and subjected to kinetic characterization. Kinetic studies have shown that the His(6) tag does not affect AspB activity. The enzyme processes L-aspartic acid, but not D-aspartic acid, with a K(m) of approximately 15 mM and a k(cat) of approximately 40 s(-1). By using this recombinant enzyme in the reverse reaction, a set of four N-substituted aspartic acids were prepared by the Michael addition of hydroxylamine, hydrazine, methoxylamine, and methylamine to fumarate. Both hydroxylamine and hydrazine were found to be excellent substrates for AspB. The k(cat) values are comparable to those observed for the AspB-catalyzed addition of ammonia to fumarate ( approximately 90 s(-1)), whereas the K(m) values are only slightly higher. The products of the enzyme-catalyzed addition of hydrazine, methoxylamine, and methylamine to fumarate were isolated and characterized by NMR spectroscopy and HPLC analysis, which revealed that AspB catalyzes all the additions with excellent enantioselectivity (>97 % ee). Its broad nucleophile specificity and high catalytic activity make AspB an attractive enzyme for the enantioselective synthesis of N-substituted aspartic acids, which are interesting building blocks for peptide and pharmaceutical synthesis as well as for peptidomimetics.     

电喷雾质谱法分析假单胞菌的代谢产物鼠李糖脂

采用电喷雾质谱(ESI-MS)结合碰撞诱导解离(CA)技术,分析了假单胞菌BS-03,利用甘油产的鼠李糖脂提取物。根据一级和二级质谱图确定了提取物中存在23种鼠李糖脂组分,主要由4种物质(RhC10、RhC10C10、Rh2C10和Rh2C10C10)构成,其中前3种的丰度较高也较平均。该提取物中单鼠李糖脂的含量高于双鼠李糖脂,并且双鼠李糖脂的二级质谱图中普遍存在强度较高的m/z为205、247的特征碎片离子,而单鼠李糖脂中却不存在此特征碎片离子。     

Purification of Pseudomonas sp. Lipase by Continuous Elution Electrophoresis Based on Pb^2＋ Precipitation Method

A Pb^2 precipitation method was designed to get rid of the impure proteins in a lipase. The results show that it was a simple way in the primary treatment of the crude samples and about 20% impure proteins were removed in the precipitation step. Further, continuous elution electrophoresis was also applied as a preparative technique for attaining the highly pure lipase. During the continuous elution electrophoresis, the enzyme was eluted as a single peak and 5.7-fold purification was achieved in a yield of 54.3%. The two steps finally yielded an electrophoretically homogeneous enzyme.     

Biocatalysts Synthesized with Lipase from Pseudomonas cepacia on Glycol-Modified ZIF-8: Characterization and Utilization in the Synthesis of Green Biodiesel

This research presents results on the production of biodiesel from the transesterification of acylglycerides present in palm oil, using the biocatalysts ZIF-8-PCL and Gly@ZIF-8-PCL synthesized by immobilization of Pseudomonas Cepacia Lipase as catalytic materials and using pure ZIF-8 and Gly@ZIF-8 (modified ZIF-8) as supports. The Gly@ZIF-8 carbonaceous material was prepared by wet impregnation of ZIF-8 with ethylene glycol as the carbon source, and then thermally modified. The calcination conditions were 900 °C for two hours with a heating rate of 7 °C/min in an inert atmosphere. A textural characterization was performed, and results showed superficial changes of materials at the microporous and mesoporous levels for the Gly@ZIF-8 material. Both the starting materials and biocatalysts were characterized by infrared spectroscopy (FTIR) and Raman spectroscopy. During the transesterification, using the two biocatalysts (ZIF-8-PCL and Gly@ZIF-8-PCL), two supernatant liquids were generated which were characterized by infrared spectroscopy (FTIR), gas chromatography coupled to mass spectrometry (GC-MS), and nuclear magnetic resonance (NMR). The results show that the two routes of synthesis of supports from ZIF-8 will be configured as effective methods for the generation of effective biocatalysts for biodiesel production.     

A replaceable dual-enzyme capillary microreactor using magnetic beads and its application for simultaneous detection of acetaldehyde and pyruvate

A novel replaceable dual-enzyme capillary microreactor was developed and evaluated using magnetic fields to immobilize the alcohol dehydrogenase (ADH)- and lactate dehydrogenase (LDH)-coated magnetic beads at desired positions in the capillary. The dual-enzyme assay was achieved by measuring the two consumption peaks of the coenzyme β-nicotinamide adenine dinucleotide (NADH), which were related to the ADH reaction and LDH reaction. The dual-enzyme capillary microreactor was constructed using magnetic beads without any modification of the inner surface of the capillary, and showed great stability and reproducibility. The electrophoretic resolution for different analytes can be easily controlled by altering the relative distance of different enzyme-coated magnetic beads. The apparent K(m) values for acetaldehyde with ADH-catalyzed reaction and for pyruvate with LDH-catalyzed reaction were determined. The detection limits for acetaldehyde and pyruvate determination are 0.01 and 0.016 mM (S/N = 3), respectively. The proposed method was successfully applied to simultaneously determine the acetaldehyde and pyruvate contents in beer samples. The results indicated that combing magnetic beads with CE is of great value to perform replaceable and controllable multienzyme capillary microreactor for investigation of a series of enzyme reactions and determination of multisubstrates.     

银纳米粒子生物催化合成的研究进展

综述了银纳米粒子生物催化合成的研究进展,重点阐述了以微生物（细菌、真菌、酵母和链霉菌）、植物浸取液(多酚类化合物和植物蛋白质)和酶（硝酸还原酶、辣根过氧化物酶和磷酸酶）等为催化剂或还原剂合成纳米银生物的方法,并对其未来发展进行了展望。参考文献51篇。     

Purification of low‐concentration phenazine‐1‐carboxylic acid from fermentation broth of Pseudomonas sp. M18 via free flow electrophoresis with gratis gravity

The low‐concentration phenazine‐1‐carboxylic acid (PCA) (=0.3 mM) extracted from fermentation broth of Pseudomonas sp. M18 was selected to be purified with a newly facile free flow electrophoresis (FFE) device with gratis gravity. Three factors of pH value and concentration of background buffer, and the cooling circle of FFE device were investigated for the purification of PCA in the FFE device. It was found that the pH value and concentration of background buffer had mild influences on the separation of PCA whether with cooling circle or not. However, the cooling circle had a much greater impact on the separation of PCA. The controlling of the band zone of PCA in FFE chamber would be difficult if without cooling circle, while the controlling would become easy if with cooling circle. Under the optimal conditions (10 mM pH 5.5 phosphate as background buffer, 30 mM pH 5.5 phosphate buffer as electrode solution, 5.46 mL/min background flux, 10 min residence time of injected sample, and 500 V), PCA could be continuously prepared from its impurities with relative high purity. The flux of sample injection was 115 μL/min, viz. 7 mL sample throughput per hour, and the recovery was up to 85%. All of the experiments indicated that the FFE technique was a good alternative tool for the study on natural biological control agents.     

Biocatalytic synthesis of (R)-(-)-mandelic acid from racemic mandelonitrile by a newly isolated nitrilase-producer Alcaligenes sp. ECU0401

By using acetonitrile as the sole nitrogen source, a microbial strain with high nitrilase activity, named as Alcaligenes sp. ECU0401, was newly isolated from soil, which could enantioselectively transform racemic mandelonitrile into (R)-(-)-mandelic acid, with an enantiomeric excess of >99.9%.     

Pungency evaluation of onion cultivars from the Venezuelan West-Center region by flow injection analysis-UV-visible spectroscopy pyruvate determination

A flow injection analysis (FIA) method was developed for the determination of pyruvate in onion cultivars (Allium cepa L.) from the West-Center region of Venezuela. The reference Schwimmer and Weston (1961) (J. Agric. Food Chem. 9 (1961) 301) Batch method was modified and adapted to FIA conditions. The formation kinetic of the 2,4-dinitrophenylhydrazine (DNPH)–pyruvate complex was evaluated at room temperature and at 37 °C. It was demonstrated the suitability of the chromopher formation at room temperature. The optimal values for the FIA parameters were: sample injection volume 3 mL, flow rate 6 mL min⁻¹, reactor length 1.5 m, sodium hydroxide concentration 1.0 mol L⁻¹ and hydrochloric acid concentration 0.5 mol L⁻¹. The working calibration range was extended from 80 mg L⁻¹ (Batch method) to 700 mg L⁻¹ with the FIA set up. The sample dilution step is thus avoided, simplifying the whole analysis process. The pungency in representative samples of the cultivars Yellow granex 438, Ultra Hybrid and Red onion “Sangre de Toro” was evaluated by the flow injection analysis (FIA)–pyruvate method and the results were compared to the reference Batch pyruvate method and to the taste panel test. Non-significant differences were found at the 95% of confidence level between the FIA method and the Batch reference method. Correlation coefficient when comparing the FIA results to the taste panel test was r² = 0.8353. Significant differences (P < 0.05) were found in the pungency of the cultivars, the Ultra Hybrid having the highest pungency. The pungency order from minor to major was: Red onion, Texas Grano 438 and Ultra Hybrid.     

Pseudomonas sp. Lipase Immobilized on Magnetic Porous Polymer Microspheres as an Effective and Recyclable Biocatalyst for Resolution of Allylic Alcohols

Magnetic porous polymeric microspheres containing epoxy groups were prepared by suspension polymerization (denoted as magnetic Fe₃O₄@GEM microspheres). Fe₃O₄@GEM with a specific surface area of 30.41 m²/g, average pore diameter of 17.13 nm, and pore volume of 0.13 cm³/g exhibited superparamagnetic behavior with the saturation magnetization of 7.1 emu/g. The content of epoxy groups on Fe₃O₄@GEM was 0.22 mmol/g. Pseudomonas sp. lipase (PSL) was covalently immobilized onto the Fe₃O₄@GEM microspheres through the reaction between the amino groups of the enzyme and the epoxy groups on the microspheres. PSL/Fe₃O₄@GEM exhibited enhanced enantioselectivity for the resolution of allylic alcohol to the corresponding optically active (S)‐allylic alcohol and (R)‐allylic alcohol acetate compared to free PSL. The enantiomeric excess of (S)‐l‐pheny‐2‐propen‐1‐ol for the former (98.1%) was 81.7 times that of the latter (1.2%) when the immobilized PSL was used for transesterification resolution of (R,S)‐l‐pheny‐2‐propen‐1‐ol. Furthermore, the ee_s and ee_p values were still retained at 95.2% and 95.4% after PSL/Fe₃O₄@GEM was recycled 10 times, indicating that PSL/Fe₃O₄@GEM had very good reusability. In addition, the transesterification resolution of (R,S)‐1‐(4‐methylphenyl)‐2‐propen‐1‐ol and (R,S)‐1‐(4‐bromophenyl)‐2‐propen‐1‐ol was catalyzed by PSL/Fe₃O₄@GEM, affording ideal ee_s and ee_p values of 99.3%, 97.4% and 99.6%, 98.2%, respectively. Therefore, PSL/Fe₃O₄@GEM demonstrated its potential as a highly efficient enzymatic reactor and Fe₃O₄@GEM would be very promising carriers for immobilizing enzymes in industrial application.     

Degradation of dibutyltin in sea water by pyoverdins isolated from Pseudomonas chlororaphis

The yellow compounds pyoverdins were isolated from Pseudomonas chlororaphis, which was isolated from mud in Japan. Degradation of tributyltin (TBT), dibutyltin (DBT), and monobutyltin (MBT) by pyoverdin (20 mg) was carried in sea water (30 ml) containing a 6 µg l^?1 concentration of TBT, DBT, and MBT at 24 °C for 24 h in aerobic conditions. TBT, DBT, and MBT in sea water were analyzed by gas chromatography–mass spectrometry in selected ion monitoring mode. DBT in sea water was degraded to MBT by pyoverdins isolated from P. chlororaphis. However, TBT and MBT in sea water was not degraded by pyoverdins. The optimum degradation of DBT in sea water was at pH 4.8–8.2, at a temperature 25–30 °C. Copyright © 2002 John Wiley & Sons, Ltd.     

Degradation of triphenyltin compounds in sea water by pyoverdins from Pseudomonas chlororaphis

The yellow compound species pyoverdin was isolated from Pseudomonas chlororaphis. Degradation of triphenyltin (TPT) by pyoverdin (20 mg) was carried in distilled water (30 ml) containing a 6 µg l^?1 concentration of TPT at 20 °C for 96 h in aerobic conditions. The organotins in water and sea water were analyzed by gas chromatograph–mass spectrometry in selected ion mode. TPT and diphenyltin (DPT) in sea water were degraded to monophenyltin (MPT) with pyoverdins isolated from P. ­chlororaphis. Degradation of TPT in sea water increased with increasing temperature between 4 and 37 °C. Optimum degradation of TPT in sea water was at pH 7–8.5. Degradation of TPT and DPT in distilled water can be faster than in sea water. Also, degradation of TPT in both water and sea water was faster than that of DPT. Tributyltin, dibutyltin, monobutyltin and MPT in water and sea water were not degraded by pyoverdins isolated from P. chlororaphis. Copyright © 2001 John Wiley & Sons, Ltd.     

Monitoring of extracellular pyruvate, lactate, and ascorbic acid during cerebral ischemia: a microdialysis study in awake gerbils

In vivo microdialysis coupled with liquid chromatography was developed for the continuous monitoring of brain neurochemicals during cerebral ischemia in awake, free moving gerbils. The dead volume of the microdialysis system was estimated to be less than 30 μl. The detection limits of the present assay were 0.2 to 2.0 μM for analytes at a signal to noise ratio of five. To validate this assay, a focal cerebral ischemia was produced by occlusion of one common carotid artery for 60 min and then reperfusion for additional 3 h in awake gerbils. A microdialysis probe was inserted into the striatum of the gerbil. Dialysates were autoinjected and analyzed extracellular pyruvate, lactate, and ascorbic acid by liquid chromatography with a UV detector during cerebral ischemia. Significant changes of pyruvate and the lactate/pyruvate ratio were observed. Biphasic and dynamic changes in ascorbic acid and lactate were proposed to correlate a secondary damage. This assay can be used as a tool to study dynamic changes of brain neurochemicals in awake animals.     

On-line microdialysis assay of l-lactate and pyruvate in vitro and in vivo by a flow-injection system with a dual enzyme electrode

A flow-injection biosensor system with an on-line microdialysis sampling is proposed for the simultaneous assay of l-lactate and pyruvate in serum and rat brain. The dialysate collected in the sample loop by perfusing Ringer’s solution through the microdialysis probe is automatically injected into the flow-injection line with a dual enzyme electrode arranged in parallel for the flow direction. The dual enzyme electrode is constructed by hybridizing a poly(1,2-diaminobenzene) film to two sensing parts, which respond selectively to l-lactate and pyruvate, respectively, without any cross-reactivity. Both the sensing parts respond linearly to the concentrations of both analytes between 0.01 and 5 mM, without any interference from oxidizable species and low-molecular weight proteins present in the dialysate. The proposed flow-injection analysis (FIA) method can be successfully applied to the simultaneous in vitro and in vivo assays of both analytes in serum and rat brain, respectively. The system can be automatically processed at an analytical speed of 19 dialysates h⁻¹ over a period of 5 h.     

Production of Biodegradable Polymer from Agro-Wastes in Alcaligenes sp. and Pseudomonas sp.

The present study was aimed to evaluate the suitability of agro-wastes and crude vegetable oils for the cost-effective production of poly-β-hydroxybutyrate (PHB), to evaluate growth kinetics and PHB production in Alcaligenes faecalis RZS4 and Pseudomonas sp. RZS1 with these carbon substrates and to study the biodegradation of PHB accumulated by these cultures. Alcaligenes faecalis RZS4 and Pseudomonas sp. RZS1 accumulates higher amounts of PHB corn (79.90% of dry cell mass) and rice straw (66.22% of dry cell mass) medium respectively. The kinetic model suggests that the Pseudomonas sp. RZS1 follows the Monod model more closely than A. faecalis RZS4. Both the cultures degrade their PHB extract under the influence of PHB depolymerase. Corn waste and rice straw appear as the best and cost-effective substrates for the sustainable production of PHB from Alcaligenes faecalis RZS4 and Pseudomonas sp. RZS1. The biopolymer accumulated by these organisms is biodegradable in nature. The agro-wastes and crude vegetable oils are good and low-cost sources of nutrients for the growth and production of PHB and other metabolites. Their use would lower the production cost of PHB and the low-cost production will reduce the sailing price of PHB-based products. This would promote the large-scale commercialization and popularization of PHB as an ecofriendly bioplastic/biopolymer.     

Biocatalytic Gelation of Silica in the Presence of a Lipase

The effect of the lipase from Burkholderia cepacia (previously known as Pseudomonas cepacia) on the gelation kinetics and gel structure was examined on a type of silica aerogel made from a mixture of methyltrimethoxysilane and tetramethoxysilane. For this purpose, gels were made with increasing concentrations of lipase in otherwise constant other conditions (pH, water and Si precursors concentrations). It was found that the enzyme accelerated the gelation kinetics, hence was participating in some way to the hydrolysis of the silica precursor. The structure of the gel was simultaneously modified to produce an increasing proportion of Q⁴ silicon sites.     

Biocatalytic synthesis of gold nanoparticles with cofactor regeneration in recombinant Escherichia coli cells

Here we report the enzymatic synthesis of gold nanoparticles (Au NPs) by an engineered Escherichia coli harboring an NADH cofactor regeneration system coupled with glycerol dehydrogenase, which can be triggered by the addition of exogenous glycerol.