Near-infrared cell-permeable Hg2+-selective ratiometric fluorescent chemodosimeters and fast indicator paper for MeHg+ based on tricarbocyanines

Three tricarbocyanine dyes (IR‐897, IR‐877, and IR‐925) with different thiourea substituents that function as dosimeter units through specific Hg²⁺‐induced desulfurization have been demonstrated in a fast indicator paper for Hg²⁺ and MeHg⁺ ions. In comparison with available Hg²⁺‐selective chemodosimeters, IR‐897 and IR‐877 show several advantages, such as convenient synthesis, very long wavelengths falling in the near‐infrared (NIR) region (650–900 nm) with high molar extinction coefficients, a ratiometric response, and quite low disturbance with Ag⁺ and Cu²⁺ ions. They exhibit large redshifts, which result in a clear color change from deep blue to pea green that can be easily monitored by the naked eye for a convenient indicator paper. In emission spectra, they display a characteristic turn‐off mode at 780 nm and turn‐on mode at 830 nm with titration of Hg²⁺ ions. Remarkably, the signal/noise (S/N) ratio with other thiophilic metal ions (Ag⁺ and Cu²⁺) is greatly enhanced with ratiometric measurement of two channels: excitation spectra mode (I_{810 nm}/I_{670 nm}, monitored at 830 nm) and emission spectra mode (I_{830 nm}/I_{780 nm}, isosbestic absorption point at 730 nm as excitation). The distinct response is dependent upon the electron‐donating effect of the thiourea substituents; that is, the stronger the electron‐donating capability of the thiourea substituents, the faster the Hg²⁺‐promoted cyclization. Additionally, experiments with living SW1116 cells show that these three tricarbocyanine dyes with low toxicity can exhibit special characteristics that are favorable for visualizing intracellular Hg²⁺ and MeHg⁺ ions in biological systems, including excellent membrane permeability, minimal interfering absorption and fluorescence from biological samples, low scattering, and deep penetration into tissues.     

A highly selective turn-on fluorescent chemosensor for copper(II) ion

A new pyrene derivative (1) containing a diaminomaleonitrile moiety exhibits high selectivity for Cu²⁺ detection. Significant fluorescence enhancement was observed with chemosensor 1 in the presence of Cu²⁺. However, the metal ions Ag⁺, Ca²⁺, Cd²⁺, Co²⁺, Fe²⁺, Fe³⁺, Hg²⁺, Mg²⁺, Mn²⁺, Ni²⁺, Pb²⁺, and Zn²⁺ produced only minor changes in fluorescence values for the system. The apparent association constant (K_a) of Cu²⁺ binding in chemosensor 1 was found to be 5.55×10³ M⁻¹. The maximum fluorescence enhancement caused by Cu²⁺ binding in chemosensor 1 was observed over the pH range 5-7.5.     

Study on the synthesis of novel fluorescent macrocyclic sensors and their sensitive properties for Cu2+ and Fe3+ in aqueous solution

In this work, we synthesised and characterised three novel fluorescence macrocyclic sensors containing optically active dansyl groups. The studies for the interaction of the synthesised compounds with various mental ions (Li⁺, Na⁺, K⁺, Ag⁺, Mg²⁺, Ca²⁺, Ba²⁺, Pb²⁺, Zn²⁺, Co²⁺, Cd²⁺, Hg²⁺, Ni²⁺, Cu²⁺, Mn²⁺, Cr³⁺, Al³⁺, Fe³⁺) were performed by fluorescence titration, Job’s plot, ESI-MS and DFT calculations. The results showed that the sensors 1a–1c displayed selective recognition for Cu²⁺ and Fe³⁺ ions and formed stoichiometry 1:1 complex through PET mechanism in DMSO/H₂O solution (1:1, v/v, pH 7.4 of HEPES). The binding constant (K) and detection limit were calculated.     

A Colorimetric and Fluorimetric Chemodosimeter for Copper Ion Based on the Conversion of Dihydropyrazine to Pyrazine

In this research, we successfully synthesized and fully characterized the new compound 5,8,13,16,21,24‐hex‐(triisopropylsilyl)ethynyl)‐6,23‐dihydro‐6,7,14,15,22,23‐hexaza‐trianthrylene ( HHATA , brown color in a mixed solvent of CH₂Cl₂/CH₃CN 1:1, v/v, weakly blue fluorescent), which can be easily oxidized to 5,8,13,16,21,24‐hex‐(triisopropylsilyl)ethynyl)‐6,7,14,15,22,23‐hexazatrianthrylene ( HATA ) (yellow color in CH₂Cl₂/CH₃CN 1:1, v/v), red fluorescent) by Cu²⁺ ions. This reaction only proceeds efficiently in the presence of Cu²⁺ ions when compared with other common metal ions such as Fe³⁺, Co²⁺, Mn²⁺, Hg²⁺, Ni²⁺, Pb²⁺, Ag⁺, Mg²⁺, Ca²⁺, K⁺, Na⁺, and Li⁺. Our result suggests that this reaction can be developed as an effective method for the detection of Cu²⁺ ions.     

An Efficient Way for the Recognition of Zinc Ion via the Fluorescence Enhancement

This study concentrates on the spectral and complexing properties of a tetraoxycalix[2]arene[2]triazine derivative bearing two bipyridines (Calix‐BIPY2) in a mixture of acetonitrile:chloroform (4:1, V:V). The results show that Calix‐BIPY2 has a highly selectivity and sensitivity towards Zn²⁺ over various competing cations (K⁺, Cu²⁺, Cd²⁺, Co²⁺, Fe²⁺, Hg²⁺, Ag⁺, Al³⁺ and Pb²⁺). The complexation of Zn²⁺ induces a remarkable fluorescence enhancement due to combination effects of the binding strength, electron spins state of metal ions, photoinduced charge transfer (PCT) and the rigidity of the complexing unit offered by calixarene‐based hosts.     

Molecular Dynamics Simulations of Metal Ion Binding to the His‐tag Motif

In our previous study, we have observed that the chelation of various metal ions to the His‐tag motifs mostly involves the i and i+2 His residues for Ni²⁺, Cu²⁺, Zn²⁺ and Co²+. In the present study, various 200 ps molecular dynamics simulations were further conducted to investigate the chelating pathway of various metal ions to the His‐tag motif with 6 His residues (His‐tag6) and the binding affinities of these metal binding pockets towards these metal ions. The results indicate that His‐tag6 with the chelated metal ion located in positions His(2,4) or His(3,5) exhibits the strongest affinity for Ni²+ and Cu²+.K⁺ was found to be preferred to chelate in His(1,3) and His(3,5) coordinations. However, Fe³+ was found to have higher affinity towards His(1,3) and His(2,4) binding pockets. Our results also suggest that Ni²⁺ exhibits the highest binding affinity towards His‐tag6 over the other metal ions. Most of the structural variations of the His‐tag6 motif were from the Histidyl side chains during metal ion binding. In addition, there is an inverse linear correlation between the final chelated distance and the charge/volume ratio of metal ion. There is a negative correlation between the metal binding affinity and the averaged potential energy generated from the MD simulations.     

Selective and Sensitive Two New Macroacyclic Schiff base Fluorescent Turn-Off Receptors for Fe3+, DFT Calculation and Their Antibacterial Activity

Two new Macroacyclic Schiff base chemosensors (L₁ and L₂) were synthesized by the one pot condensation reaction of 2-[3-(2-formyl phenoxy)propoxy]benzaldehyde and aminophenol in a 1:2 molar ratio and were characterized by IR, NMR spectroscopy. Both Schiff bases displayed high selectivity and sensitivity towards Fe³⁺ over other metal ions in H₂O-DMF solution (Ag⁺,Cu²⁺, Ni²⁺, Zn²⁺, Mg⁺², Mn⁺², Pb⁺², Co⁺², Hg⁺², Cr⁺³, Na⁺, Ba⁺² and Cd²⁺) due to their structure including oxygen donor atoms. The test results showed fluorescence quenching of the fluorophores when Fe³⁺ was bound to the recognition units. From test results, a high selectivity for Fe³⁺ were discovered in this type of sensors, especially, the probe based on 2-aminophenol exhibited more significant quenching in fluorescence intensity compared with 4-aminophenol-based due to its rigidity structure. In addition, the structure of ligands and their antibacterial properties was investigated.     

Molecular Vise Approach to Create Metal‐Binding Sites in MOFs and Detection of Biomarkers

We report a new approach to create metal‐binding site in a series of metal–organic frameworks (MOFs), where tetratopic carboxylate linker, 4′,4′′,4′′′,4′′′′‐methanetetrayltetrabiphenyl‐4‐carboxylic acid, is partially replaced by a tritopic carboxylate linker, tris(4‐carboxybiphenyl)amine, in combination with monotopic linkers, formic acid, trifluoroacetic acid, benzoic acid, isonicotinic acid, 4‐chlorobenzoic acid, and 4‐nitrobenzoic acid, respectively. The distance between these paired‐up linkers can be precisely controlled, ranging from 5.4 to 10.8 Å, where a variety of metals, Mg²⁺, Al³⁺, Cr³⁺, Mn²⁺, Fe³⁺, Co²⁺, Ni²⁺, Cu²⁺, Zn²⁺, Ag⁺, Cd²⁺ and Pb²⁺, can be placed in. The distribution of these metal‐binding sites across a single crystal is visualized by 3D tomography of laser scanning confocal microscopy with a resolution of 10 nm. The binding affinity between the metal and its binding‐site in MOF can be varied in a large range (observed binding constants, K_obs from 1.56×10² to 1.70×10⁴ L mol^?1), in aqueous solution. The fluorescence of these crystals can be used to detect biomarkers, such as cysteine, homocysteine and glutathione, with ultrahigh sensitivity and without the interference of urine, through the dissociation of metal ions from their binding sites.     

Binding Interaction of Captopril with Metal Ions: A Fluorescence Quenching Study

The binding interaction of captopril (CPL) with biologically active metal ions Mg²⁺, Ca²⁺, Mn²⁺, Co²⁺, Ni²⁺, Cu²⁺ and Zn²⁺ was investigated in an aqueous acidic medium by fluorescence spectroscopy. The experimental results showed that the metal ions quenched the intrinsic fluorescence of CPL by forming CPL‐metal complexes. It was found that static quenching was the main reason for the fluorescence quenching. The quenching constant in the case of Cu²⁺ was highest among all quenchers, perhaps due to its high nuclear charge and small size. Quenching of CPL by metal ions follows the order Cu²⁺>Ni²⁺>Co²⁺>Ca²⁺>Zn²⁺>Mn²⁺>Mg²⁺. The quenching constant K_sv, bimolecular quenching constant K_q, binding constant K and the binding sites "n" were determined together with their thermodynamic parameters at 27 and 37°C. The positive entropy change indicated the gain in configurational entropy as a result of chelation. The process of interaction was spontaneous and mainly ΔS‐driven.     

Tridentate benzimidazole ligand and its metal complexes: Synthesis,characterization, photo physical and sensor properties

A tridentate bisbenzimidazole-pyridine ligand (L-C⁵) with two pentyl side-units and its metal complexes with Mn²⁺, Fe²⁺, Co²⁺, Ni²⁺, Cu²⁺ and Zn²⁺ metal ions were synthesized and characterized. The structures of the ligand (L-C⁵) and its five coordinate [Mn(L-C⁵)Cl₂] were elucidated by single crystal X-ray diffraction studies. The absorption and photoluminescence properties of the compounds were studied in solution media. The ligand is highly fluorescent, and binding of the metal ions to the ligand has caused significant changes in the emission band (shift or quenching). Moreover, the effect of aggregation on UV–Vis. absorption and emission properties was examined in MeOH-water mixtures. The ligand was found to show aggregation-induced quenching in the MeOH-water mixture. The ligand was also screened for its colorimetric and fluorometric sensing ability of several metal ions [Na⁺, K⁺, Mg²⁺, Al³⁺, Ca²⁺, Mn²⁺, Fe²⁺, Fe³⁺, Co²⁺, Ni²⁺, Cu²⁺, Zn²⁺, Hg²⁺, Pb²⁺]. The ligand showed selective sensing ability towards Zn²⁺, and the limit of detection was calculated as 3.09 × 10⁻⁷ m . The ligand also showed a distinguishable color change in the presence of Fe²⁺ under daylight.     

Binding of Cu+ and Cu2+ with peptides: Peptides = oxytocin,Arg8‐vasopressin,bradykinin, angiotensin‐I,substance‐P,somatostatin, and neurotensin

The intrinsic binding ability of 7 natural peptides (oxytocin, arg⁸‐vasopressin, bradykinin, angiotensin‐I, substance‐P, somatostatin, and neurotensin) with copper in 2 different oxidation states (Cu^I/II) derived from different Cu^+/2+ precursor sources have been investigated for their charge‐dependent binding characteristics. The peptide‐Cu^I/II complexes, [M − (n‐1)H + nCu^I] and [M − (2n‐1)H + nCu^II], are prepared/generated by the reaction of peptides with CuI solution/Cu‐target and CuSO₄ solution and are analyzed by using matrix‐assisted laser desorption/ionization (MALDI) time‐of‐flight mass spectrometry. The MALDI mass spectra of both [M − (n‐1)H + nCu^I] and [M − (2n‐1)H + nCu^II] complexes show no mass shift due to the loss of ─H atoms in the main chain ─NH of these peptides by Cu⁺ and Cu²⁺ deprotonation. The measured m/z value indicates the reduction of Cu^I/II oxidation state into Cu⁰ during MALDI processes. The number and relative abundance of Cu⁺ bound to the peptides are greater compared with the Cu²⁺ bound peptides. Oxytocin, arg⁸‐vasopressin, bradykinin, substance‐P, and somatostatin show the binding of 5Cu⁺, and angiotensin‐I and neurotensin show the binding of 7Cu⁺ from both CuI and Cu targets, while bradykinin shows the binding of 2Cu²⁺, oxytocin, arg⁸‐vasopressin, angiotensin‐I, and substance‐P; somatostatin shows the binding of 3Cu²⁺; and neurotensin shows 4Cu²⁺ binding. The binding of more Cu⁺ with these small peptides signifies that the bonding characteristics of both Cu⁺ and Cu²⁺ are different. The amino acid residues responsible for the binding of both Cu⁺ and Cu²⁺ in these peptides have been identified based on the density functional theory computed binding energy values of Cu⁺ and the fragment transformation method predicted binding preference of Cu²⁺ for individual amino acids.     

A Fluorescent Chemosensor for Al3+ Based on CO Isomerization Derivated from Curcumin

A simple and nontoxic fluorescent chemosensor of di‐O‐methyl curcumin has been prepared from curcumin. The sensor exhibited selective and sensitive fluorescent responses toward Al³⁺ over a wide range of metal ions, such as Mn²⁺, Ce³⁺, Pt²⁺, Sn⁴⁺, Hg⁺, Sb³⁺, K⁺, Ca²⁺, Mg²⁺, Ba²⁺, Cu²⁺, Ni²⁺, Na⁺, NH₄⁺, Ag⁺, Pb²⁺, Zn²⁺, Fe²⁺, Fe³⁺, Hg²⁺ and Cr³⁺ in ethanol/water. The free ligand showed quite weak fluorescence emission due to the isomerization of C?O double bond in the excited state, however, after addition of Al³⁺, fluorescence emission results in a prominent fluorescence enhancement.     

Control of a photoswitching chelator by metal ions: DFT,NBO, and QTAIM analysis

Ability of aroylhydrazones to change conformation upon interaction with light makes them promising candidates for molecular switches. Isomerization can be controlled through complexation with selected metal ions which bind with different affinity. N′‐[1‐(2‐hydroxyphenyl)ethyliden]iso‐nicotinoylhydrazide (HAPI) is an example of a dual‐wavelenght photoswitching molecule, whose complexation with metal ions was recently experimentally investigated (Franks et al. J. Inorg. Chem. 2014, 53, 1397). In this contribution, complexes between HAPI and K⁺, Ca²⁺, Mn²⁺, Fe²⁺, Fe³⁺, Cu⁺, Cu²⁺, and Zn²⁺ ions were investigated using Density Functional Theory, Natural Bond Order analysis, and Quantum Theory of Atoms in Molecules. The most important parameters that determine complex stability are found to be ion radius and charge transferred from ligands to the ion: smaller ion radii and larger CT values characterize formation of more stable complexes. Our results explain experimentally observed effect of different metal ions on photoisomerization through determination of metal ion affinity (MIA): photoisomerization is inhibited if MIA exceeds 100 kcal/mol; for MIA between 50 and 100 kcal/mol excess of metal ions prevents isomerization, whereas in case of MIA below 50 kcal/mol metal ions have no influence on light–HAPI interaction. © 2015 Wiley Periodicals, Inc.     

Fourier transform infrared spectroscopy study of the effect of pH on anion and cation adsorption onto poly(acrylo‐amidino diethylenediamine)

The role of hydrogen bonding in the chemistry of transition‐metal complexes remains a topic of intense scientific and technological interest. Poly(acrylo‐amidino diethylenediamine) was synthesized to study the effects of hydrogen bonding on complexes at different pHs. The polymer was synthesized through the coupling of diethylene triamine with polyacrylonitrile fiber in the presence of AlCl₃ · 6H₂O addition. The adsorption capacity of this polymer was 11.4 mequiv/g. The ions used for the adsorption test were CrO, PO, Cu²⁺, Ni²⁺, Fe²⁺, and Ag⁺. All experiments were confirmed with Fourier transform infrared. In the study of anion adsorption, at low pHs, only ionic bonds existed, whereas at high pHs, no bonds existed. However, in the middle pH region, both ionic bonds and hydrogen bonds formed between poly(acrylo‐amidino diethylenediamine) and the chromate ion or phosphate ion. When poly(acrylo‐amidino diethylenediamine) and metal ions (Cu²⁺, Ni²⁺, Fe²⁺, and Ag⁺) formed complexes, a hydrogen‐bonding effect was not observed with Fourier transform infrared. The quantity of metal ions adsorbed onto poly(acrylo‐amidino diethylenediamine) followed the order Ag⁺ > Cu²⁺ > Fe²⁺ > Ni²⁺. © 2004 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 42: 2010–2018, 2004     

Fine Control of the Redox Reactivity of a Nonheme Iron(III)–Peroxo Complex by Binding Redox‐Inactive Metal Ions

Redox‐inactive metal ions are one of the most important co‐factors involved in dioxygen activation and formation reactions by metalloenzymes. In this study, we have shown that the logarithm of the rate constants of electron‐transfer and C−H bond activation reactions by nonheme iron(III)–peroxo complexes binding redox‐inactive metal ions, [(TMC)Fe^III(O₂)]⁺‐M^{n +} (M^{n +}=Sc³⁺, Y³⁺, Lu³⁺, and La³⁺), increases linearly with the increase of the Lewis acidity of the redox‐inactive metal ions (ΔE ), which is determined from the g_zz values of EPR spectra of O₂^.−‐M^{n +} complexes. In contrast, the logarithm of the rate constants of the [(TMC)Fe^III(O₂)]⁺‐M^{n +} complexes in nucleophilic reactions with aldehydes decreases linearly as the ΔE value increases. Thus, the Lewis acidity of the redox‐inactive metal ions bound to the mononuclear nonheme iron(III)–peroxo complex modulates the reactivity of the [(TMC)Fe^III(O₂)]⁺‐M^{n +} complexes in electron‐transfer, electrophilic, and nucleophilic reactions.     

Metal‐Ion‐Mediated Tuning of Duplex DNA Binding by Bis(2‐(2‐pyridyl)‐1H‐benzimidazole)

Studies of double‐stranded‐DNA binding have been performed with three isomeric bis(2‐(n‐pyridyl)‐1H‐benzimidazole)s (n=2, 3, 4). Like the well‐known Hoechst 33258, which is a bisbenzimidazole compound, these three isomers bind to the minor groove of duplex DNA. DNA binding by the three isomers was investigated in the presence of the divalent metal ions Mg²⁺, Co²⁺, Ni²⁺, Cu²⁺, and Zn²⁺. Ligand–DNA interactions were probed with fluorescence and circular dichroism spectroscopy. These studies revealed that the binding of the 2‐pyridyl derivative to DNA is dramatically reduced in the presence of Co²⁺, Ni²⁺, and Cu²⁺ ions and is abolished completely at a ligand/metal‐cation ratio of 1:1. Control experiments done with the isomeric 3‐ and 4‐pyridyl derivatives showed that their binding to DNA is unaffected by the aforementioned transition‐metal ions. The ability of 2‐(2‐pyridyl)benzimidazole to chelate metal ions and the conformational changes of the ligand associated with ion chelation probably led to such unusual binding results for the ortho isomer. The addition of ethylenediaminetetraacetic acid (EDTA) reversed the effects completely.     

A Highly Selective and Sensitive Fluorescent Chemosensor for Detection of Al3+ in Totally Aqueous Media

A fluorescent chemosensor ( 1 ) based on 2‐hydroxy‐1‐naphthaldehyde Schiff‐base was developed for the detection of Al³⁺ in 100% aqueous solution. Upon addition of Al³⁺, a significant fluorescence enhancement was observed, which was not affected by other metal ions including Na⁺, K⁺, Ca²⁺, Mg²⁺, Mn²⁺, Co²⁺, Ni²⁺, Cu²⁺, Cr³⁺, Ag⁺, Pb²⁺, Zn²⁺, Cd²⁺, Hg²⁺, Fe²⁺ and Fe³⁺ under weak acid conditions. Moreover, the specific response to Al³⁺ was visible under natural light. The binding mode between 1 and Al³⁺ was clarified by ESI‐MS and ¹H NMR.     

A New Fluorescent Chemosensor for Metal Ions Based upon 1,8‐Naphthalimide and 8‐Hydroxyquinoline

A new fluorescent chemosensor based upon 1,8‐naphthalimide and 8‐hydroxyquinoline was synthesized, and its fluorescent properties in the presence of different metal cations (Hg²⁺, Ag⁺, Zn²⁺, Fe²⁺, Cd²⁺, Pb²⁺, Ca²⁺, Cu²⁺, Mg²⁺, and Ba²⁺) were investigated. It displayed fluorescence quenching with some heavy and transition metal (HTM) ions, and the quenching strongly depended on the nature of HTM ions.     

A New Luminescent Ruthenium(II) Polypyridine‐derived Dipicolylamine Complex as a Sensor for Cu2+ Ions

A chemo‐sensor [Ru(bpy)₂(bpy‐DPF)](PF₆)₂ ( 1 ) (bpy=2,2′‐bipyridine, bpy‐DPF=2,2′‐bipyridyl‐4,4′‐bis(N,N‐di(2‐picolyl))formylamide) for Cu²⁺ using di(2‐picolyl)amine (DPA) as the recognition group and a ruthenium(II) complex as the reporting group was synthesized and characterized successfully. It demonstrates a high selectivity and efficient signaling behavior only for Cu²⁺ with obvious red‐shifted MLCT (metal‐to‐ligand charge transfer transitions) absorptions and dramatic fluorescence quenching compared with Zn²⁺ and other metal ions.     

Metal-Induced Fluorescence Quenching of Photoconvertible Fluorescent Protein DendFP

Sensitive and accurate detection of specific metal ions is important for sensor development and can advance analytical science and support environmental and human medical examinations. Fluorescent proteins (FPs) can be quenched by specific metal ions and spectroscopically show a unique fluorescence-quenching sensitivity, suggesting their potential application as FP-based metal biosensors. Since the characteristics of the fluorescence quenching are difficult to predict, spectroscopic analysis of new FPs is important for the development of FP-based biosensors. Here we reported the spectroscopic and structural analysis of metal-induced fluorescence quenching of the photoconvertible fluorescent protein DendFP. The spectroscopic analysis showed that Fe²⁺, Fe³⁺, and Cu²⁺ significantly reduced the fluorescence emission of DendFP. The metal titration experiments showed that the dissociation constants (K_d) of Fe²⁺, Fe³⁺, and Cu²⁺ for DendFP were 24.59, 41.66, and 137.18 μM, respectively. The tetrameric interface of DendFP, which the metal ions cannot bind to, was analyzed. Structural comparison of the metal-binding sites of DendFP with those of iq-mEmerald and Dronpa suggested that quenchable DendFP has a unique metal-binding site on the β-barrel that does not utilize the histidine pair for metal binding.