Synthesis Of 1,5-Dithio-D-Glucopyranose and Some of its Biologically Relevant Derivatives

Abstract

5-Thio-D-glucose was transformed into the 1,5-dithio analog 5 through a sequence involving anomeric bromination followed by a Cerny hydrosulfurization reaction. The nucleophilic reactivity of this first representative of a new class of sugar mercaptans was investigated through the synthetic elaboration of some biologically relevant dithiosaccharides and particularly the first thia-analogs of glucosinolates 18 and 19.     

Imidazolium Based Probes for Recognition of Biologically and Medically Relevant Anions

The imidazolium derivatives due to their positive charge possess one of the most polarized and positively charged proton at C2‐H to form strong ionic hydrogen bond (also termed as double ionic hydrogen bond) with anions and also provide opportunities for anion – π interactions with electron‐deficient imidazolium ring. In the present review article, imidazolium based molecular probes for their ability to recognize inorganic anions like halides, cyanide, perchlorate, carboxylic acids, phosphate, sulfate etc. and their derived molecules viz. nucleotides, DNA, RNA, surfactants, proteins, etc have been discussed. The review covers the literature published after year 2009 and has > 130 references. The previous literature has already been discussed by Yoon et al. in two review articles published in Chem. Soc. Rev. 2006 and 2010.     

水溶性二铁六羰基配合物与生物相关分子的相互作用及其促进一氧化碳释放

二铁六羰基配合物[Fe₂（μ-SCH₂R）₂（CO）6]（R=CH （OH） CH₂（OH）,1）是一个水溶性且能够释放一氧化碳的分子（CORM）,我们应用各种光谱技术研究了其与血红蛋白（Hb）、肌红蛋白（Mb）、牛血清白蛋白（BSA）、谷胱甘肽（GSH）和DNA等生物分子的相互作用。红外光谱结果表明,蛋白质和谷胱甘肽均能促进配合物1分解释放CO。该CO释放过程符合一级动力学模型,其中谷胱甘肽促进CO释放的效率最高。紫外吸收光谱变化和荧光猝灭效应也表明这些生物相关分子与二铁羰基配合物之间存在相互作用。蛋白质和配合物1的CD光谱结果显示,配合物没有引起蛋白质的构象变化。pUC19质粒DNA与配合物1之间的作用表明该配合物不会引起DNA损伤。     

Biologically Relevant Macrocyclic Complexes of Copper Spectral, Magnetic, Thermal and Antibacterial Approach

Copper(II) macrocyclic complexes have been synthesized with five novel ligands: L¹-1,7,10,16-tetraaza-2,6,11,15-tetraone-4,13-dithiacycloocta-decane, L²-1,7,11,17-tetraaza-2,6,12,16-tetraone-4,14-dithia-cyclocosane, L³-1,7,10, 13,19,22-hexaaza-2,6,14,18-tetraone-4,16-dithiacyclo-tetracosane, L⁴-1,7,14,20,tetraaza-2,6,15,19-tetraone-4,17,di- thiatricyclo [22, 4, O^21,26, O^8,13] hexacosa-8,10,12,21,23,25-hexene, L⁵- 1,7,13,19,25,26-hexaaza-2,6,14,18 tetraone-4,16 dithia tricyclo [23, 3, 1, I^8,12] hexacosa [8(26), 10, 12, 20(25), 22, 24] hexane and characterized by elemental analysis, molar conductance, magnetic susceptibility, i.r, u.v.–vis, EPR spectral studies, thermal studies and electrochemical properties. The molar conductance measurements of the complexes in DMSO correspond to 1:2 electrolytes. g-Values are calculated for all of the complexes in the polycrystalline form as well as in DMSO solution. On the basis of i.r, electronic and EPR spectral studies a square planar geometry has been assigned to these complexes. Cyclic voltammograms for all the complexes are similar to quasi-reversible redox processes Cu^IICu^II⇆Cu^IICu^I⇆Cu^ICu^I. The complexes were also evaluated against the growth of bacteria (S. fecalis and E.coli) in vitro. An erratum to this article is available at .     

Spectroscopic and Electrochemical Studies of the Interaction of Some Gold(III) Complexes with Biologically Relevant Thiones

The interaction of gold(III) complexes, [Au(cis‐DACH)Cl₂]Cl and [Au(cis‐DACH)₂]Cl₃ complexes (DACH = cis‐1,2‐diaminocyclohexane), with ¹³C, ¹⁵N‐enriched thiourea (Tu) and 1,3‐diazinane‐2‐thione ligands was investigated. The progress of these reactions was monitored by NMR (¹H, ¹³C, and ¹⁵N) and UV–vis spectroscopy as well as square wave stripping voltammetry. The kinetic studies of the substitution reactions between the above‐mentioned complexes with thiones in aqueous solutions containing 30 mM KCl, which is used to suppress the hydrolysis of the chloride complexes, were conducted. These reactions were followed under pseudo–first‐order conditions as functions of ligand concentration, pH, and temperature. The activation parameters (ΔH^#, ΔS^#) were calculated from Eyring plots, and the negative values of ΔS^≠ lend support for an associative mechanism. The kinetic data also indicated a relatively higher reactivity of [Au(cis‐DACH)Cl₂]Cl than that of [Au(cis‐DACH)₂]Cl₃ toward the thiones.     

Sulfonimidamides and Imidosulfuric Diamides: Compounds from an Underexplored Part of Biologically Relevant Chemical Space

Two novel solid reagents—1-sulfonimidoyl- and 1-sulfamimidoyl-3-methylimidazolium derivatives—for the synthesis of sulfonimidamides and imidosulfuric diamides, respectively, were developed. It is shown that these reagents are very effective in substitution reactions with various N- and O-nucleophiles; therefore, they significantly extend the accessibility to the chemical space covered by organosulfur(VI) compounds with S=N bonds. In addition, previously unknown imidosulfuric diamides with free imino nitrogen groups were prepared, and their physical and chemical properties were characterized (including molecular geometry, pK_a, Log P, microsomal stability, and reactivity towards typical electrophiles). Similar to other organosulfur(VI) derivatives with S=N bonds, these compounds can be considered as promising bioisosteres of amides, ureas, or sulfonamides.     

Oxidative Dissolution of Silver Nanoparticles by Biologically Relevant Oxidants: A Kinetic and Mechanistic Study

The oxidative dissolution of silver nanoparticles (AgNPs) plays an important role in the synthesis of well‐defined nanostructured materials, and may be responsible for their activities in biological systems. In this study, we use stopped‐flow spectrophotometry to investigate the kinetics and mechanism of the oxidative dissolution of AgNPs by H₂O₂ in quasi‐physiological conditions. Our results show that the reaction is first order with respect to both [Ag⁰] and [H₂O₂], and parallel pathways that involve the oxidation of H₂O₂ and HO₂^? are proposed. The order of the reaction is independent of the size of the AgNPs (≈5–20 nm). The rate of dissolution increases with increasing pH from 6.0 to 8.5. At 298 K and I=0.1 M , the value of k_b is five orders of magnitude higher than that of k_a (where k_a and k_b are the rate constants for the oxidative dissolution of AgNPs by H₂O₂ and HO₂^?, respectively). In addition, the effects of surface coating and the presence of halide ions on the dissolution rates are investigated. A possible mechanism for the oxidative dissolution of AgNPs by H₂O₂ is proposed. We further demonstrate that the toxicities of AgNPs in both bacteria and mammalian cells are enhanced in the presence of H₂O₂, thereby highlighting the biological relevance of investigating the oxidative dissolution of AgNPs.     

Mixed-Ligand Complexes of 2-(Aminomethyl)benzimidazole Palladium(II) with Various Biologically Relevant Ligands

cis-Dichloro(2-(aminomethyl)benzimidazole)palladium(II), [Pd(AMBI)Cl₂], was synthesized and characterized. The stoichiometry and stability constants of the complexes formed between [Pd(AMBI)(H₂O)₂]²⁺ with various biologically relevant ligands containing different functional groups are investigated. The ligands used are dicarboxylic acids, amino acids, peptides and DNA constitutents. The results show the formation of 1:1 complexes with amino acids and dicarboxylic acids. The effect of the chelate ring size of the dicarboxylic acid complexes on their stability constants is examined. Peptides form both 1:1 complexes and the corresponding deprotonated amide species. Structural effects of the peptide on the amide deprotonation are investigated. DNA pyrimidinic constituents such as uracil, uridine, thymidine and thymine form 1:1 and 1:2 complexes, whereas purinic constituents such as inosine 5′-monophosphate (5′-IMP) and guanosine 5′-monophosphate (5′-GMP) form only 1:1 complexes. The concentration distribution of the complexes in solution was evaluated. The effect of increasing chloride ion concentration on the formation constant of CBDCA with Pd(AMBI)²⁺ was reported.     

Synthesis of Biologically Relevant 1,2,3- and 1,3,4-Triazoles: From Classical Pathway to Green Chemistry

Green Chemistry has become in the last two decades an increasing part of research interest. Nonconventional «green» sources for chemical reactions include micro-wave, mechanical mixing, visible light and ultrasound. 1,2,3-triazoles have important applications in pharmaceutical chemistry while their 1,2,4 counterparts are developed to a lesser extent. In the review presented here we will focus on synthesis of 1,2,3 and 1,2,4-triazole systems by means of classical and « green chemistry » conditions involving ultrasound chemistry and mechanochemistry. The focus will be on compounds/scaffolds that possess biological/pharmacophoric properties. Finally, we will also present the formal cycloreversion of 1,2,3-triazole compounds under mechanical forces and its potential use in biological systems.     

空间距离在三维分子相似度计算中的应用

采用Tripos公司的MOPAC模块计算分子的空间距离,所得距离矩阵用带有约束条件的空间距离方法计算分子的相似度,同时通过4组化合物的计算,与纯空间距离方法进行比较,得到了较为满意的结果。     

一个生物相关单一手性二维金属有机鲱骨形分子网格:双-3-氨基-(S)-酪氨酸钴(Ⅱ)

The first example of homochiral two-dimensional neutral cobalt(Ⅱ)-3-amino-(S)-tyrosine (ATYR) coordination polymer, bis(3-amino-(S)-tyrosinato)cobalt(Ⅱ) 1 was synthesized under the hydrothermal reaction of Co(ClO₄)₂·6H₂O with ATYR in which 1 displays modest second harmonic generation response.     

Carboxylate‐Assisted Iridium‐Catalyzed C−H Amination of Arenes with Biologically Relevant Alkyl Azides

An iridium‐catalyzed C?H amination of arenes with a wide substrate scope is reported. Benzamides with electron‐donating and ‐withdrawing groups and linear, branched, and cyclic alkyl azides are all applicable. Cesium carboxylate is crucial for both reactivity and regioselectivity of the reactions. Many biologically relevant molecules, such as amino acid, peptide, steroid, sugar, and thymidine derivatives can be introduced to arenes with high yields and 100 % chiral retention.     

分子生物色谱用于中药活性成分筛选及质量控制方法的研究

报道了近期工作进展,首先阐述了分子生物色谱的基本原理及特点,然后介绍了分子生物色谱对多种中药、不同产地的同种中药活性成分谱图模式的比较,结合已有的工作对活性成分筛选方法、相互作用研究、质量控制方法发展做了细致的说明,并讨论了其发展方向及前景。     

A Chiral Halogen‐Bonding [3]Rotaxane for the Recognition and Sensing of Biologically Relevant Dicarboxylate Anions

The unprecedented application of a chiral halogen‐bonding [3]rotaxane host system for the discrimination of stereo‐ and E/Z geometric isomers of a dicarboxylate anion guest is described. Synthesised by a chloride anion templation strategy, the [3]rotaxane host recognises dicarboxylates through the formation of 1:1 stoichiometric sandwich complexes. This process was analysed by molecular dynamics simulations, which revealed the critical synergy of halogen and hydrogen bonding interactions in anion discrimination. In addition, the centrally located chiral (S)‐BINOL motif of the [3]rotaxane axle component facilitates the complexed dicarboxylate species to be sensed via a fluorescence response.     

New Biologically Hybrid Pharmacophore Thiazolidinone-Based Indole Derivatives: Synthesis,In Vitro Alpha-Amylase and Alpha-Glucosidase along with Molecular Docking Investigations

Amylase and glucosidase enzymes are the primary harmful source in the development of the chronic condition known as diabetes mellitus. The main function of these enzymes is to break the macromolecules into simple sugar units which are directly involved in the solubility of blood, hence increasing blood glucose levels. To overcome this effect, there is a need for a potent and effective inhibitor that inhibits the conversion of macromolecules of sugar into its smaller units. In this regard, we synthesized thiazolidinone-based indole derivatives (1–20). The synthesized derivatives were evaluated for α-amylase and α-glucosidase inhibitory activity. Different substituted derivatives were found with moderate to good potentials having IC₅₀ values ranging, for α-amylase, from 1.50 ± 0.05 to 29.60 ± 0.40 μM and, for α-glucosidase, from IC₅₀ = 2.40 ± 0.10 to 31.50 ± 0.50 μM. Among the varied substituted compounds, the most active analogs four (1.80 ± 0.70 and 2.70 ± 0.70), five (1.50 ± 0.05 and 2.40 ± 0.10, respectively) of the series showed few folds better inhibitory activity than standard drug acarbose (IC₅₀ = 10.20 ± 0.10 and 11.70 ± 0.10 μM, respectively). Moreover, structure–activity relationship (SAR) was established and binding interactions were analyzed for ligands and proteins (α-amylase and α-glucosidase) through a molecular docking study.     

Kinetic Magnetic‐Field Effect Involving the Small Biologically Relevant Inorganic Radicals NO and O2.−

Oxidation of dihydrorhodamine 123 (DHR) to rhodamine 123 (RH) by oxoperoxonitrite (ONOO^?), formed through recombination of NO and O₂^.? radicals resulting from thermal decomposition of 3‐morpholinosydnonimine (SIN‐1) in buffered aerated aqueous solution at pH 7.6, represents a kinetic model system of the reactivity of NO and O₂^.? in biochemical systems. A magnetic‐field effect (MFE) on the yield of RH detected in this system is explored in the full range of fields between 0 and 18 T. It is found to increase in a nearly linear fashion up to a value of 5.5±1.6 % at 18 T and 23 °C (3.1±0.7 % at 40 °C). A theoretical framework to analyze the MFE in terms of the magnetic‐field‐enhanced recombination rate constant k_rec of NO and O₂^.? due to magnetic mixing of T₀ and S spin states of the radical pair by the Δg mechanism is developed, including estimation of magnetic properties (g tensor and spin relaxation times) of NO and O₂^.? in aqueous solution, and calculation of the MFE on k_rec using the theoretical formalism of Gorelik at al. The factor with which the MFE on k_rec is translated to the MFE on the yield of ONOO^? and RH is derived for various kinetic scenarios representing possible sink channels for NO and O₂^.?. With reasonable assumptions for the values of some unknown kinetic parameters, the theoretical predictions account well for the observed MFE.