Analysis of the nuclear-electronic orbital method for model hydrogen transfer systems

Fundamental issues associated with the application of the nuclear-electronic orbital (NEO) approach to hydrogen transfer systems are addressed. In the NEO approach, specified nuclei are treated quantum mechanically on the same level as the electrons, and mixed nuclear-electronic wavefunctions are calculated with molecular orbital methods. The positions of the nuclear basis function centers are optimized variationally. In the application of the NEO approach to hydrogen transfer systems, the hydrogen nuclei and all electrons are treated quantum mechanically. Within the NEO framework, the transferring hydrogen atom can be represented by two basis function centers to allow delocalization of the proton vibrational wavefunction. In this paper, the NEO approach is applied to the [He-H-He]+ and [He-H-He]++ model systems. Analyses of technical issues pertaining to flexibility of the basis set to describe both single and double well proton potential energy surfaces, linear dependency of the hydrogen basis functions, multiple minima in the basis function center optimization, convergence of the number of hydrogen basis function centers, and basis set superposition error are presented. The accuracy of the NEO approach is tested by comparison to grid calculations for these model systems.     

Impact of nuclear quantum effects on the molecular structure of bihalides and the hydrogen fluoride dimer

The structural impact of nuclear quantum effects is investigated for a set of bihalides, [XHX](-), X = F, Cl, and Br, and the hydrogen fluoride dimer. Structures are calculated with the vibrational self-consistent-field (VSCF) method, the second-order vibrational perturbation theory method (VPT2), and the nuclear-electronic orbital (NEO) approach. In the VSCF and VPT2 methods, the vibrationally averaged geometries are calculated for the Born-Oppenheimer electronic potential energy surface. In the NEO approach, the hydrogen nuclei are treated quantum mechanically on the same level as the electrons, and mixed nuclear-electronic wave functions are calculated variationally with molecular orbital methods. Electron-electron and electron-proton dynamical correlation effects are included in the NEO approach using second-order perturbation theory (NEO-MP2). The nuclear quantum effects are found to alter the distances between the heavy atoms by 0.02-0.05 A for the systems studied. These effects are of similar magnitude as the electron correlation effects. For the bihalides, inclusion of the nuclear quantum effects with the NEO-MP2 or the VSCF method increases the X-X distance. The bihalide X-X distances are similar for both methods and are consistent with two-dimensional grid calculations and experimental values, thereby validating the use of the computationally efficient NEO-MP2 method for these types of systems. For the hydrogen fluoride dimer, inclusion of nuclear quantum effects decreases the F-F distance with the NEO-MP2 method and increases the F-F distance with the VSCF and VPT2 methods. The VPT2 F-F distances for the hydrogen fluoride dimer and the deuterated form are consistent with the experimentally determined values. The NEO-MP2 F-F distance is in excellent agreement with the distance obtained experimentally for a model that removes the large amplitude bending motions. The analysis of these calculations provides insight into the significance of electron-electron and electron-proton correlation, anharmonicity of the vibrational modes, and nonadiabatic effects for hydrogen-bonded systems.     

Analysis of electron-positron wavefunctions in the nuclear-electronic orbital framework

The nuclear-electronic orbital explicitly correlated Hartree-Fock (NEO-XCHF) approach is extended and applied to the positronic systems PsH, LiPs, and e(+)LiH. In this implementation, all electrons and positrons are treated quantum mechanically, and all nuclei are treated classically. This approach utilizes molecular orbital techniques with Gaussian basis sets for the electrons and positrons and includes electron-positron correlation with explicitly correlated Gaussian-type geminal functions. An efficient strategy is developed to reduce the number of variational parameters in the NEO-XCHF calculations. The annihilation rates, electron and positron densities, and electron-positron contact densities are compared to available results from higher-level calculations. Our analysis illustrates that the NEO-XCHF method produces qualitative to semi-quantitative results for these properties at a relatively low computational cost by treating only the essential electron-positron correlation explicitly. The NEO-HF method, which does not include explicit correlation and therefore is extremely efficient, is found to provide qualitatively accurate electron-positron contact densities for the e(+)LiH system but not for the LiPs system. Thus, the utility of the NEO-HF method for determining where annihilation occurs is system dependent and not generally reliable. The NEO-XCHF method, however, provides a computationally practical and reliable approach for determining where annihilation will occur in positronic systems.     

Alternative wavefunction ansatz for including explicit electron-proton correlation in the nuclear-electronic orbital approach

The nuclear-electronic orbital (NEO) approach treats specified nuclei quantum mechanically on the same level as the electrons with molecular orbital techniques. The explicitly correlated Hartree-Fock (NEO-XCHF) approach was developed to incorporate electron-nucleus dynamical correlation directly into the variational optimization of the nuclear-electronic wavefunction. In the original version of this approach, the Hartree-Fock wavefunction is multiplied by (1+G?), where G? is a geminal operator expressed as a sum of Gaussian type geminal functions that depend on the electron-proton distance. Herein, a new wavefunction ansatz is proposed to avoid the computation of five- and six-particle integrals and to simplify the computation of the lower dimensional integrals involving the geminal functions. In the new ansatz, denoted NEO-XCHF2, the Hartree-Fock wavefunction is multiplied by √(1+G?) rather than (1+G?). Although the NEO-XCHF2 ansatz eliminates the integrals that are quadratic in the geminal functions, it introduces terms in the kinetic energy integrals with no known analytical solution. A truncated expansion scheme is devised to approximate these problematic terms. An alternative hybrid approach, in which the kinetic energy terms are calculated with the original NEO-XCHF ansatz and the potential energy terms are calculated with the NEO-XCHF2 ansatz, is also implemented. Applications to a series of model systems with up to four electrons provide validation for the NEO-XCHF2 approach and the treatments of the kinetic energy terms.     

Multi-component molecular orbital theory for electrons and nuclei including many-body effect with full configuration interaction treatment: isotope effects on hydrogen molecules

A multi-component molecular orbital (MC_MO) theory is developed for a combined quantum system of electrons and nuclei with the full configuration interaction (CI) scheme of Cartesian Gaussian-type functions. The technique of graphical unitary group approach (GUGA) is modified to obtain the CI matrix elements for many kinds of quantum particles efficiently. The optimum basis sets for quantum nuclei are proposed with the fully variational procedure. The average internuclear distances, dipole polarizabilities, and nuclear vibrational excitation energies for isotopic hydrogen molecules calculated with optimized basis sets are found to adequately reproduce the corresponding experimental values.     

Quantum wave packet ab initio molecular dynamics: an approach to study quantum dynamics in large systems

A methodology to efficiently conduct simultaneous dynamics of electrons and nuclei is presented. The approach involves quantum wave packet dynamics using an accurate banded, sparse and Toeplitz representation for the discrete free propagator, in conjunction with ab initio molecular dynamics treatment of the electronic and classical nuclear degree of freedom. The latter may be achieved either by using atom-centered density-matrix propagation or by using Born-Oppenheimer dynamics. The two components of the methodology, namely, quantum dynamics and ab initio molecular dynamics, are harnessed together using a time-dependent self-consistent field-like coupling procedure. The quantum wave packet dynamics is made computationally robust by using adaptive grids to achieve optimized sampling. One notable feature of the approach is that important quantum dynamical effects including zero-point effects, tunneling, as well as over-barrier reflections are treated accurately. The electronic degrees of freedom are simultaneously handled at accurate levels of density functional theory, including hybrid or gradient corrected approximations. Benchmark calculations are provided for proton transfer systems and the dynamics results are compared with exact calculations to determine the accuracy of the approach.     

Density functional theory treatment of electron correlation in the nuclear-electronic orbital approach

This paper presents the nuclear-electronic orbital density functional theory [NEO-DFT(ee)] method for including electron-electron correlation and nuclear quantum effects self-consistently in quantum chemical calculations. The NEO approach is designed to treat a relatively small number of nuclei quantum mechanically, while the remaining nuclei are treated classically. In the NEO-DFT(ee) approach, the correlated electron density is used to obtain the nuclear molecular orbitals, and the resulting nuclear density is used to obtain the correlated electron density during an iterative procedure that continues until convergence of both the nuclear and electronic densities. This approach includes feedback between the correlated electron density and the nuclear wavefunction. The application of this approach to bihalides and acetylene indicates that the nuclear quantum effects do not significantly impact the electron correlation energy, but the quantum nuclear energy is enhanced in the NEO-DFT(ee) B3LYP method. The excellent agreement of the NEO-DFT(ee)-optimized bihalide structures with the vibrationally averaged geometries from grid-based quantum dynamical methods provides validation for the NEO-DFT(ee) approach. Electron-proton correlation could be included by the development of an electron-nucleus correlation functional. Alternatively, explicit electron-proton correlation could be included directly into the NEO self-consistent-field framework with Gaussian-type geminal functions.     

Orbital-orthogonality constraints and basis-set optimization

A new procedure is presented for introducing arbitrary orbital-orthogonality constraints in the variational optimization of otherwise nonorthogonal multiconfiguration electronic wave functions. It is based on suitable analytical changes to the expressions for the first and second derivatives of the electronic energy with respect to the independent variational parameters, and can be applied in the presence of symmetry constraints. It is tested using a second-derivative optimization procedure, the Optimized Basis Set -- Generalized Multiconfiguration Spin-Coupled (OBS-GMCSC) approach, that can treat basis-function exponential parameters as variational parameters, to be optimized simultaneously with configuration, spin-coupling, and orbital coefficients. This enables rigorous optimization of basis-set exponential parameters even for fully orthogonal multiconfiguration wave functions. Test calculations are carried out, with optimized even-tempered basis sets, on Li(2) and on the CH radical. For the latter, special attention is paid to the electronic spin density at the nuclei.     

Multicomponent density functional theory study of the interplay between electron-electron and electron-proton correlation

The interplay between electron-electron and electron-proton correlation is investigated within the framework of the nuclear-electronic orbital density functional theory (NEO-DFT) approach, which treats electrons and select protons quantum mechanically on the same level. Recently two electron-proton correlation functionals were developed from the electron-proton pair densities obtained from explicitly correlated wavefunctions. In these previous derivations, the kinetic energy contribution arising from electron-proton correlation was neglected. In this paper, an electron-proton correlation functional that includes this kinetic energy contribution is derived using the adiabatic connection formula in multicomponent DFT. The performance of the NEO-DFT approach using all three electron-proton correlation functionals in conjunction with three well-established electronic exchange-correlation functionals is assessed. NEO-DFT calculations with these electron-proton correlation functionals capture the increase in the hydrogen vibrational stretching frequencies arising from the inclusion of electron-electron correlation in model systems. Electron-proton and electron-electron correlation are found to be uncoupled and predominantly additive effects to the total energy for the model systems studied. Thus, electron-proton correlation functionals and electronic exchange-correlation functionals can be developed independently and subsequently combined together without re-parameterization.     

Rydberg states with quantum Monte Carlo

Calculations on Rydberg states are performed using quantum Monte Carlo methods. Excitation energies and singlet-triplet splittings are calculated for two model systems, the carbon atom (3P and 1P) and carbon monoxide ((1Sigma and 3Sigma). Kohn-Sham wave functions constructed from open-shell localized Hartree-Fock orbitals are used as trial and guide functions. The fixed-node diffusion quantum Monte Carlo (FN-DMC) method depends strongly on the wave function's nodal hypersurface. Nodal artefacts are investigated for the ground state of the carbon atom. Their effect on the FN-DMC results can be analyzed quantitatively. FN-DMC leads to accurate excitation energies but to less accurate singlet-triplet splittings. Variational Monte Carlo calculations are able to reproduce the experimental results for both the excitation energies and the singlet-triplet splittings.     

Application of Löwdin's canonical orthogonalization method to the Slater‐type orbital configuration‐interaction basis set

We apply Löwdin's canonical orthogonalization method to investigate the linearly dependent problem arising from the variational calculation of atomic systems using Slater‐type orbital configuration‐interaction (STO‐CI) basis functions. With a specific arithmetic precision used in numerical computations, the nonorthogonal STO‐CI basis is easily linearly dependent when the number of basis functions is sufficiently large. We show that Löwdin's canonical orthogonalization method can successfully overcome such problem and simultaneously reduce the dimension of basis set. This is illustrated first through an S‐wave model He atom, and then the real two‐electron atoms in both the ground and excited states. In all of these calculations, the variational bound state energies of the two‐electron systems are obtained in reasonably high accuracy using over‐redundant STO‐CI bases, however, without using extended high‐precision technique. © 2015 Wiley Periodicals, Inc.     

Multi-component molecular orbital study of isotope effects on lithium hydride molecules with the configuration interaction scheme

The multi-component molecular orbital method, which can take account of the quantum effect of the electrons and nuclei, is applied to the calculation of lithium hydride isotope species with the configuration interaction (CI) scheme. The optimum basis set functions for quantum nuclei are proposed by the fully variational procedure under single electronic–single nuclear excitation CI level. The average internuclear distances and dipole moments for isotopic lithium hydride molecules calculated with small basis functions are reasonable agreement with the corresponding experimental values.     

XMVB: a program for ab initio nonorthogonal valence bond computations

An ab initio nonorthogonal valence bond program, called XMVB, is described in this article. The XMVB package uses Heitler-London-Slater-Pauling (HLSP) functions as state functions, and calculations can be performed with either all independent state functions for a molecule or preferably a few selected important state functions. Both our proposed paired-permanent-determinant approach and conventional Slater determinant expansion algorithm are implemented for the evaluation of the Hamiltonian and overlap matrix elements among VB functions. XMVB contains the capabilities of valence bond self-consistent field (VBSCF), breathing orbital valence bond (BOVB), and valence bond configuration interaction (VBCI) computations. The VB orbitals, used to construct VB functions, can be defined flexibly in the calculations depending on particular applications and focused problems, and they may be strictly localized, delocalized, or bonded-distorted (semidelocalized). The parallel version of XMVB based on MPI (Message Passing Interface) is also available.     

A fragment molecular-orbital-multicomponent molecular-orbital method for analyzing HD isotope effects in large molecules

We have developed a fragment molecular orbital (FMO)-multi-component MO (MC_MO) method to analyze isotope effect due to differences between the quantum effects of protons and deuterons for large molecules such as proteins and DNA. The FMO-MC_MO method enables the determination of both the electronic and the protonic (deuteronic) wave functions simultaneously, and can directly express isotope effects, including coupling effects between nuclei and electrons. In our calculations of two polyglycines, which serve as prototypes for biological molecules, by this method, we clearly observed the geometrical relaxation induced by the HD isotope effect in the intramolecular hydrogen bonding portions of the molecules. The HD isotope effect on the interfragment interaction energy, including that of the hydrogen bonding parts, was also demonstrated: the hydrogen bond was weakened by replacement of hydrogen with deuterium. We also developed electrostatic potential approximations for use in the FMO-MC_MO calculations, and the accuracy of the energy differences induced by the isotope effect was independent of the approximation level of the FMO-MC_MO. Our results confirmed that the FMO-MC_MO method is a powerful tool for the detailed analysis of changes in hydrogen bonding and interaction energies induced by the HD isotope effect for large biological molecules.     

Calculations of the electronic structures of cage molecules using free-electron orbitals as a basis

A non-empirical molecular orbital method, particularly suitable for calculations on cage-like molecules, is described. The method uses as basis functions the set of free-electron functions which are the solutions of Schrödinger's equation for an electron confined between two concentric, spherical potential energy barriers. Application of the theory to the SCF calculation of the energies of the delocalized electrons in benzene and tetrasulphur tetranitride shows that the model is capable of interpreting the properties of such systems. However, it does highlight a difficulty in the calculation of excited state energies with one-centre models which appears to be largely unrecognized.Extension of the method to a consideration of all the valence electrons, using P₄ as an example, reveals problems the origin of which is an inadequate treatment of the core electrons. It is suggested that these problems may best be dealt with by use of a suitable pseudo potential.     

Resonance and aromaticity: an ab initio valence bond approach

Resonance energy is one of the criteria to measure aromaticity. The effect of the use of different orbital models is investigated in the calculated resonance energies of cyclic conjugated hydrocarbons within the framework of the ab initio Valence Bond Self-Consistent Field (VBSCF) method. The VB wave function for each system was constructed using a linear combination of the VB structures (spin functions), which closely resemble the Kekulé valence structures, and two types of orbitals, that is, strictly atomic (local) and delocalized atomic (delocal) p-orbitals, were used to describe the π-system. It is found that the Pauling-Wheland's resonance energy with nonorthogonal structures decreases, while the same with orthogonalized structures and the total mean resonance energy (the sum of the weighted off-diagonal contributions in the Hamiltonian matrix of orthogonalized structures) increase when delocal orbitals are used as compared to local p-orbitals. Analysis of the interactions between the different structures of a system shows that the resonance in the 6π electrons conjugated circuits have the largest contributions to the resonance energy. The VBSCF calculations also show that the extra stability of phenanthrene, a kinked benzenoid, as compared to its linear counterpart, anthracene, is a consequence of the resonance in the π-system rather than the H-H interaction in the bay region as suggested previously. Finally, the empirical parameters for the resonance interactions between different 4n+2 or 4n π electrons conjugated circuits, used in Randi?'s conjugated circuits theory or Herdon's semi-emprical VB approach, are quantified. These parameters have to be scaled by the structure coefficients (weights) of the contributing structures.