New accessory for studies of isotopic 1H/2H exchange and biomolecular interactions using transmission infrared spectroscopy

We present here a new accessory for IR transmission measurements of ¹H/²H exchange, as an ancillary tool for monitoring structural features of biomolecules in aqueous solution. This new accessory results from the combination of two dialysis membranes and a conventional liquid cell having two cylinders containing ²H₂O buffer. When compared with conventional transmission measurements, carried out either after dissolving lyophilized biomolecules in ²H₂O or after dialyzing the aqueous solution considered against ²H₂O buffer, this accessory shows the following advantages: (1) controlled measurements over the initial steps of this isotopic exchange and absence of molecular aggregation, and (2) smaller sample amounts. This new Fourier transform IR cell can also be used to analyze ligand–biomolecule and drug–cell interactions.      

HPLC-ICP-MS and HPLC-ES-MS/MS characterization of synthetic seleno-arsenic compounds

Various toxicological and metabolic interactions have been reported to exist between arsenic and selenium. In the present study, synthetic seleno-arsenic compounds, potentially suitable for probing metabolic interactions between these two elements, were prepared and tentatively characterized by using high-performance liquid chromatography (HPLC)–electrospray tandem mass spectrometry and HPLC–inductively coupled plasma mass spectrometry. In analogy to the recently identified thio-arsenic species, which can be prepared from their corresponding oxo-arsenic species via reaction with H₂S, the seleno-arsenic compounds were also derived from oxo-arsenic compounds via reaction with H₂Se. Figure H₂Se bubbled into solutions containing oxo‐arsenosugars converts them into their seleno‐arsenosugar analogues.     

Detection of bacteria by surface-enhanced Raman spectroscopy

The detection and identification of dilute bacterial samples by surface-enhanced Raman spectroscopy has been explored by mixing aqueous suspensions of bacteria with a suspension of nanocolloidal silver particles. An estimate of the detection limit of E. coli was obtained by varying the concentration of bacteria. By correcting the Raman spectra for the broad librational OH band of water, reproducible spectra were obtained for E. coli concentrations as low as approximately 10³ cfu/mL. To aid in the assignment of Raman bands, spectra for E. coli in D₂O are also reported. Figure Light scattering apparatus used to detect bacteria     

Iron fractionation for corrosion products from natural gas pipelines by continuous-flow sequential extraction

The forms and quantities of iron species in corrosion product samples from natural gas pipelines were examined, using a continuous-flow sequential extraction system. Sequential extraction consists of four steps that dissolve water soluble iron (FeSO₄), acid soluble iron (FeCO₃), reducible iron (Fe-(oxyhydr)oxides) and oxidisable iron (FeS₂) fractions, respectively. Selectivity of extracting reagents for particular iron species was evaluated by determination of co-extracted anions, using ion chromatography, and evolved CO₂, using indirect flame atomic absorption spectrometer (FAAS). Iron was found predominantly in the reducible fraction (61–99%), indicating that Fe-(oxyhydr)oxides are the major constituents of the corrosion products.      

Instrumental modification intended to save time,and volumes of sample and reagent solutions,in the atomic fluorescence spectrometric determination of mercury

Use of small membrane pumps, instead of peristaltic pumps, to introduce sample and reagent solutions into the spectrometer has several advantages in atomic fluorescence spectrometric determination of mercury. This simple modification results in a substantial saving in the time required for the measurements and so 90% of reagent solution volumes and 95% of sample solution volumes are saved, with a consequent decrease in the volume of waste generated. The sampling frequency is almost tripled, with no deterioration in sensitivity, which is similar to that obtained by use of peristaltic pumps. The relative standard deviation for ten consecutive measurements of a 1 μg L⁻¹ mercury solution was approximately 2%. Figure Small membrane pumps for the atomic fluorescene spectro metric determination of mercury     

Calibration possibilities and modifier use in ETV ICP OES determination of trace and minor elements in plant materials

The possibilities for universal calibration based on multi-element aqueous standard solutions and graphite laboratory reference materials (graphite standards) for the electrothermal vaporization inductively coupled plasma optical emission spectrometric (ETV ICP OES) determination of Al, B, Ba, Cd, Co, Cr, Cu, Fe, Mn, Ni, P, Pb, S, Sr, Ti, V, and Zn in plant materials were investigated. A commercially available state-of-the-art ETV device was coupled with an Echelle ICP spectrometer equipped with a charge-injection-device (CID) camera for spectral detection. The transition area between transport tube and ETV graphite tube and the gas streams for inner gas, bypass gas, and modifier gas were optimized to achieve best transport efficiencies. The influence of four gaseous modifiers (CCl₄, CHCl₃, CCl₂F₂, and C₃H₈) added to the inner gas was studied. Five reference materials (RM P-Alfalfa, Lucerne; NIES CRM No.9 “Sargasso”; CTA-VTL-2 Virginia Tobacco Leaves; NIST SRM 1515 Apple Leaves; IAEA-V-10 Hay Powder) were used for method validation. If certified reference materials are not available, calibration against graphite standards or dried aqueous standard solutions is possible. Three carbonization procedures as sample pretreatment for the plant materials were investigated. Figure Picture of the ETV system (sample changer and graphite-tube furbace) used in this work Presented at the European Symposium on Atomic Spectrometry (ESAS) September 28-October 1, 2008, Weimar, Germany.     

Fluorometry of hydrogen peroxide using oxidative decomposition of folic acid

Hydrogen peroxide (H₂O₂) is one of the most important reactive oxygen species. In the present study, a fluorometry method for detecting H₂O₂ utilizing folic acid was evaluated. Folic acid was decomposed by H₂O₂ in the presence of Cu(II) into pterine-6-carboxylic acid, leading to strong fluorescence enhancement. In the absence of the metal ion, superoxide and H₂O₂ could not decompose folic acid. Also, H₂O₂ plus sodium hypochlorite (a source of singlet oxygen) could not induce fluorescence enhancement. These results demonstrate that H₂O₂ can be selectively detected using folic acid plus Cu(II). The limit of detection (LOD; at S/N=3) for H₂O₂ is 0.5 μM. This method based on the fluorescence enhancement of folic acid was applied in order to determine small amounts of H₂O₂ generated through the autooxidation of semicarbazide (generation rate: ∼0.01 μM min⁻¹), a carcinogenic compound.      

ZrOCl<Subscript>2</Subscript> · 8H<Subscript>2</Subscript>O: An efficient catalyst for rapid one-pot synthesis of 3-carboxycoumarins under ultrasound irradiation in water

In this report, a rapid, efficient and environmental friendly synthesis of 3-carboxycoumarins under ultrasound irradiation in water media is described. The Knoevenagel condensation of Meldrum’s acid with substituted benzaldehydes in the presence of zirconium oxide chloride (ZrOCl₂·8H₂O) and ultrasonic irradiation in water gave the corresponding 3-carboxycoumarins in good to excellent yields.      

Raman spectroscopy after accelerated ageing tests to assess the origin of some decayed products found in real historical bricks affected by urban polluted atmospheres

Bricks, together with stones and mortars, can be considered as one of the most important building materials that constitute our built heritage. Numerous factors which cause several decaying pathologies in bricks can be listed, but it should be emphasised that the most severe and damaging one is the wet and dry deposition of both combustion and greenhouse gases (CO₂, SO _x and NO _x mainly). For instance, after the impact of CO₂ and SO _x , the decayed products promoted in bricks are carbonates and sulphates. Once identified in all these kinds of salts in real samples, it is necessary to make sure that the aggressive atmospheric conditions are sufficient to promote the formation of these salts. Therefore, accelerated exposure test are a good alternative in order to simulate the formation of these decayed compounds and to predict the reactions that promote the decaying mechanism. In this work, brick samples manufactured at different firing temperatures following ancient methods were subjected to humidity/dryness, freeze/thaw, CO₂ and SO₂ (KESTERNICH DIN 50018) accelerated ageing tests followed by a Raman spectroscopy screening in order to verify the formation of sulphate and carbonate salts in bricks on accelerated conditions, simulating the damage caused by a polluted atmosphere throughout many years of exposure.      

Towards biochips using microstructured optical fiber sensors

In this paper we present the first incorporation of a microstructured optical fiber (MOF) into biochip applications. A 16-mm-long piece of MOF is incorporated into an optic-fluidic coupler chip, which is fabricated in PMMA polymer using a CO₂ laser. The developed chip configuration allows the continuous control of liquid flow through the MOF and simultaneous optical characterization. While integrated in the chip, the MOF is functionalized towards the capture of a specific single-stranded DNA string by immobilizing a sensing layer on the microstructured internal surfaces of the fiber. The sensing layer contains the DNA string complementary to the target DNA sequence and thus operates through the highly selective DNA hybridization process. Optical detection of the captured DNA was carried out using the evanescent-wave-sensing principle. Owing to the small size of the chip, the presented technique allows for analysis of sample volumes down to 300 nL and the fabrication of miniaturized portable devices.      

An amperometric hydrogen peroxide biosensor based on immobilization of horseradish peroxidase on an electrode modified with magnetic dextran microspheres

A new kind of magnetic dextran microsphere (MDMS) with uniform shape and narrow diameter distribution has been prepared from magnetic iron nanoparticles and dextran. Horseradish peroxidase (HRP) was successfully immobilized on the surface of an MDMS-modified glassy-carbon electrode (GCE), and the immobilized HRP displayed excellent electrocatalytic activity in the reduction of H₂O₂ in the presence of the mediator hydroquinone (HQ). The effects of experimental variables such as the concentration of HQ, solution pH, and the working potential were investigated for optimum analytical performance. This biosensor had a fast response to H₂O₂ of less than 10 s and an excellent linear relationship was obtained in the concentration range 0.20 μmol L⁻¹–0.68 mmol L⁻¹, with a detection limit of 0.078 μmol L⁻¹ (S/N = 3) under the optimum conditions. The response showed Michaelis–Menten behavior at larger H₂O₂ concentrations, and the apparent Michaelis–Menten constant was estimated to be 1.38 mmol L⁻¹. Moreover, the selectivity, stability, and reproducibility of the biosensor were evaluated, with satisfactory results. Figure Amperometric response of the biosensor to successive additions of H₂O₂ and the plot of amperometric response vs. H₂O₂ concentration     

Ferric nitrate in the presence of catalytic amounts of KBr or NaBr: an efficient and homoselective catalytic media for the selective oxidation of sulfides to sulfoxides

Abstract  A mild, efficient, and highly selective oxidation method of sulfides to sulfoxides using Fe(NO₃)₃·9H₂O and catalytic amounts of KBr or NaBr in the presence of wet SiO₂ (50% w/w) has been developed. A variety of aliphatic and aromatic sulfides were selectively oxidized at room temperature in good to excellent yields. Graphical abstract        

Comparison of protein immobilisation methods onto oxidised and native carbon nanofibres for optimum biosensor development

The properties of native and oxidised graphene layered carbon nanofibres are compared, and their utilisation in enzyme biosensor systems using different immobilisation methods are evaluated. The efficient oxidation of carbon nanofibres with concentrated H₂SO₄/HNO₃ is confirmed by Raman spectroscopy while the introduction of carboxylic acid groups on the surface of the fibres by titration studies. The oxidised fibres show enhanced oxidation efficiency to hydrogen peroxide, while at the same time they exhibit a more efficient and selective interaction with enzymes. The analytical characteristics of biosensor systems based on the adsorption or covalent immobilisation of the enzyme glucose oxidase on carbon nanofibres are compared. The study reveals that carbon nanofibres are excellent substrates for enzyme immobilisation allowing the development of highly stable biosensor systems. Figure Immobilization of proteins on carbon nanofibres     

Photo-induced cold vapor generation with low molecular weight alcohol, aldehyde, or carboxylic acid for atomic fluorescence spectrometric determination of mercury

With UV irradiation, Hg²⁺ in aqueous solution can be converted into Hg⁰ cold vapor by low molecular weight alcohols, aldehydes, or carboxylic acids, e.g., methanol, formaldehyde, acetaldehyde, glycol, 1,2-propanediol, glycerol, acetic acid, oxalic acid, or malonic acid. It was found that the presence of nano-TiO₂ more or less improved the efficiency of the photo-induced chemical/cold vapor generation (photo-CVG) with most of the organic reductants. The nano-TiO₂-enhanced photo-CVG systems can be coupled to various analytical atomic spectrometric techniques for the determination of ultratrace mercury. In this work, we evaluated the application of this method to the atomic fluorescence spectrometric (AFS) determination of mercury in cold vapor mode. Under the optimized experimental conditions, the instrumental limits of detection (based on three times the standard deviation of 11 measurements of a blank solution) were around 0.02–0.04 μg L⁻¹, with linear dynamic ranges up to 15 μg L⁻¹. The interference of transition metals and the mechanism of the photo-CVG are briefly discussed. Real sample analysis using the photo-CVG-AFS method revealed that it was promising for water and geological analysis of ultralow levels of mercury. Image of the photo-CVG instrumentation showing the photoreactor inside the water cooling unit     

Investigation of polynuclear Zr(IV) hydroxide complexes by nanoelectrospray mass-spectrometry combined with XAFS

Polynuclear species of zirconium in acidic aqueous solution are investigated by combining X-ray absorption spectroscopy (XAFS) and nanoelectrospray mass spectrometry (ESI-MS). Species distributions are measured between pH_C 0 and pH_C 3 for [Zr] = 1.5–10 mM. While the monomer remains a minor species, with increasing pH the degree of polymerization increases and the formation of tetramers, pentamers, octamers, and larger polymers is observed. The high resolution of the mass spectrometer permits the unambiguous determination of polynuclear zirconium hydroxide complexes by means of their isotopic patterns. The relative abundances of mononuclear and polynuclear species present simultaneously in solution are measured, even if one of the species contributes only 0.1% of the Zr concentration. For the first time it has been directly observed that the hydrolysis of polynuclear Zr species is a continuous process which leads to charge compensation through the sequential substitution of water molecules by hydroxide ligands until doubly charged polymers dominate at conditions (H⁺ and Zr concentrations) close to the solubility of Zr(OH)₄(am). The invasiveness of the electrospray process was minimized by using very mild declustering conditions, leaving the polynuclear species within a solvent shell of approximately 20 water molecules. Figure Schematic Diagram of Multiplexed Measurement of 9 Anti-Nuclear Antibodies Using the AtheNa Multilyte Assay     

Modelling of toluene solid-phase microextraction for indoor air sampling

Solid-phase microextraction (SPME) is a convenient and efficient sampling technique recently applied to indoor air analysis. We propose here a theoretical model of the adsorption kinetics of toluene on SPME fibre under static extraction conditions. We discuss the effects of sampling volume and initial concentration of analyte on the adsorption kinetics. This model is used to estimate the limits of detection taking into account operating conditions and to calculate theoretical calibration curves. Results of comparison with experimental data are encouraging: only 11% difference for calibration curves and 30% for the estimation of the limit of detection. On the basis of this kinetics model, the solid concentration gradient in the Carboxen coating was modelled with Fick’s second law of diffusion in unsteady-state mass-transfer mode. Mass diffusion from the gas sample to the SPME fibre was also investigated. It was shown that diffusion is the limiting step of the mass-transfer process in the static mode. Thus, the model developed, allows a better understanding of adsorption on Carboxen fibre and in the future could be a useful tool for cheap and time-saving development of SPME methods and the estimation of sampling performance. Figure PDMS/Carboxen SPME fibre (scanning electron microscopy – magnification x 220)     

Rapid analysis of native neomycin components on a portable capillary electrophoresis system with potential gradient detection

A simple method based on capillary electrophoresis with potential gradient detection was developed to separate and detect neomycin components within 4 min without a derivatization step. Satisfactory separation and good repeatability were obtained using a separation buffer composed of 1 mM ammonium citrate (pH 3.5). The linearity of the method ranged from 10 to 1000 ppm with a limit of detection for neomycin B of about 7 ppm. After a simple dilution and filtering pretreatment step, neomycin components in three real samples were successfully analyzed without any major interference. Due to its simplicity and reliability, this method could provide an excellent alternative to the assays currently listed in U.S. and European Pharmacopoeia. The experiments were performed on a portable capillary electrophoresis system and, hence, the method can be readily applied to field analysis and point-of-care testing. Figure Photo of portable CE-P2-PGD system     

Digital bioanalysis

Digital microfluidics has recently emerged as a new paradigm in the world of lab-on-a-chip technology. A wide variety of bioanalyses have been successfully implemented in this format. This paper reviews the various techniques that have been adapted to digital microfluidic systems, and the current state of the field. Figure A multiplexed digital microfluidic device. Six analytical platforms are wired in series, allowing multiple independent analyses to be performed simultaneously from a single set of controls.     

Use of the diffusive gradients in thin films technique to evaluate (bio)available trace metal concentrations in river water

Concentrations of Cd, Cu, Cr, Pb, Ni and Zn were monitored in the Svitava River (the Czech Republic) during April and September 2005. Total concentrations and total dissolved concentrations were obtained through regular water sampling, and the diffusive gradients in thin films technique (DGT) were used to gain information on the kinetically labile metal concentrations. Each measured concentration was compared with the corresponding average (bio)available concentration calculated from the mass of metal accumulated by the moss species Fontinalis antipyretica. The concentrations of Cd, Pb, Cr and Zn measured using DGT corresponded well with those obtained after the deployment of Fontinalis antipyretica moss bags in the Svitava River, but the concentrations of Cu and Ni did not. The calculated (bio)available Cu concentration correlated well with the total dissolved concentration of Cu, whereas no correlation was found to exist between the concentrations of Ni. Scheme of the Svitava River monitoring station, including the DGT sampling units and Fontinalis antipyretica moss bags Electronic supplementary material Supplementary material is available in the online version of this article at and is accessible for authorized users.