FTIR studies of intermolecular hydrogen bonding in halogenated ethanols

The effect of halogen substitution on intermolecular hydrogen-bonding in ethanol is studied. Specifically, Fourier-transform infrared (FTIR) spectra of ethanol, 2,2,2-trifluoroethanol (TFE), and 2,2,2-trichloroethanol dissolved in carbon tetrachloride are reported as a function of temperature and concentration. The spectral intensities corresponding to monomer, dimer, and multimer formation are used to determine the effect of halogen substitution on intermolecular hydrogen-bonding. The enthalpy for dimerization was found to evolve from -4.2+/-0.3 kcal/mol in ethanol to -6.8+/-1.0 kcal/mol in TFE. An opposite trend was observed for multimer formation with enthalpies of -3.7+/-0.5 in ethanol and -2.1+/-1.4 kcal/mol in TFE. The majority of this evolution is assigned to the ability of ethanols to form intramolecular hydrogen bonds involving the hydoxyl proton and the halogen substituents.     

Studies of intramolecular hydrogen bonding in protonated and non-protonated hexahydropyridinobenzodioxins

The conformational stability of hexahydropyridobenzodioxin and related derivatives in both protonated and non-protonated forms have been investigated by means of ab initio molecular orbital methods as well as semi-empirical AM1 and PM3 methods. One of the cis conformers (cis2e) has been found to be most stable due to the formation of an intramolecular hydrogen bond, other conformers including the trans isomer cannot form this interaction but are of different stability because of the orientation of the polar oxygens and the nitrogen. The effect of the intramolecular hydrogen bonding on the stability of hexahydropyridobenzodioxin and its methylated derivatives has been examined using various basis sets levels. In protonated form, both the semi-empirical and ab initio calculations give excellent agreement in energetic order; however, different orderings of conformer stabilities are observed by different computational methods in non-protonated form. The results provide insight into the intramolecular hydrogen bonding in computational studies of biologically important molecules.     

Investigations of intramolecular hydrogen bonding in three types of Schiff bases by 2H and 3H NMR isotope effects

Hydrogen bonding within the structures of three Schiff bases (1-3), obtained by condensation of 4-methoxy-, 5-methoxy- and 4,6-dimethoxysalicylaldehyde with methylamine, was investigated by measuring deuterium and tritium NMR isotope effects. The primary deuterium and tritium isotope effects (delta(XH)-delta(XD/T)) and secondary one-bond nitrogen deuterium effect appear to be very useful parameters for defining the character of intramolecular hydrogen bonds. The tritium isotope effects were also determined for nitrogen-hydrogen one-bond coupling constants for both 4-methoxy and 4,6-dimethoxy derivatives. These parameters are seen to be highly sensitive to hydrogen bond characteristics and can be used to distinguish localized and tautomeric hydrogen bonds.     

FTIR study of hydrogen bonding of stearic acid with ethanol, dimethyl sulfoxide,and acetonitrile in supercritical CO_2

FTIR spectroscopy was used to study the hydrogen bonding of stearic acid with ethanol, dimethyl sulfoxide (DMSO),and acetonitrile in supercritical CO_2 at 318.15 K, and 12.5 and 16.5 MPa. The concentrations of the cosolvents range from 0—0.6 mol·L~(-1). The area percentage of absorption bands for hydrogen-bonded and nonhydrogen-bonded species was obtained from the IR spectra. The acid and the cosolvents can form hydrogen bond even when their concentrations are very low. At fixed solute concentration, the extent of hydrogenbonding increases with cosolvent concentration. At higher ethanol concentrations, it seems that one stearic acid molecule can hydrogen bond with more than one ethanol molecules simultaneously. It is seen that the strength of the hydrogen bond formed by the acid and the cosolvents is in the order: DMSO>ethanol>acetonitrile.     

Syntheses and spectroscopic studies on zinc(II) and mercury(II) complexes of isatin-3-thiosemicarbazone

Zinc(II) and mercury(II) complexes were prepared by reacting isatin-3-thiosemicarbazone (ISTSCH) with zinc(II) acetate or mercury(II) bromide. The complexes were characterized by IR, Raman, diffuse reflectance, ¹H and ¹³C NMR spectra and elemental analysis. Tetrahedral structures for Zn(ISTSC)₂ and Hg(ISTSCH)Br₂ are suggested.     

The conformational effect of form I helical poly(L-proline) and form II helical poly(L-proline) to the complex formation with helical poly(L-glutamic acid) through hydrogen bonding

The complex formation between helical poly-L-glutamic acid (PLGA) and helical poly-L-proline (PLP) was studied in a methanol-water (2 : 1) cosolvent and a propanol-water cosolvent (9 : 1). Reduced viscosity, circular dichroism, pH, and molar absorptivity were measured. The experimental results exhibit that the interpolymer complex was formed between helical PLGA and helical PLP through hydrogen bonding. When the complex was formed the unit mole ratio of PLGA : PLP(II) is 2 : 1 and PLGA : PLP(I) is 1.5 : 1, the ability of complex formation of PLP (II) with PLGA is better than that of PLP(I). On complexation the conformations of PLGA and PLP change and this change is more enhanced in the PLGA-PLP(II) than the PLGA-PLP(I) complex; its cause is studied. © 1993 John Wiley & Sons, Inc.     

Hydrogen bonding networks in gabapentin protic pharmaceutical salts: NMR and in silico studies

Hydrogen bonds (HBs) play a key role in the supramolecular arrangement of crystalline solids and, although they have been extensively studied, the influence of their strength and geometry on crystal packing remains poorly understood. Here we describe the crystal structures of two novel protic gabapentin (GBP) pharmaceutical salts prepared with the coformers methanesulfonic acid (GBP:METHA) and ethanesulfonic acid (GBP:ETHA). This study encompasses experimental and computational electronic structure analyses of ¹H NMR chemical shifts (CSs), upon in silico HB cleavage. GBP:METHA and GBP:ETHA crystal packing comprise two main structural domains: an ionic layer (characterized by the presence of charge-assisted ⁺NH_GBP⋯ O⁻_METHA/ETHA HB interactions) and a neutral layer generated in a different way for each salt, mainly due to the presence of bifurcated HB interactions. A comprehensive study of HB networks is presented for GBP:METHA, by isolating molecular fragments involved in distinct HB types (NH⋯ O, OH⋯ O, and CH⋯ O) obtained from in silico disassembling of an optimized three-dimensional packing structure. Formation of HB leads to calculated ¹H NMR CS changes from 0.4 to ~5.8 ppm. This study further attempts to assess how ¹H NMR CS of protons engaged in certain HB are affected when other nearby HB, involving bifurcated or geminal/vicinal hydrogen atoms, are removed.     

A comparison of the intramolecular and intermolecular hydrogen bonding of N,N′-ethylenebis(aminobenzylidene) in the solid state with its salen analogue

The crystal structure of H₂amben has been elucidated for the first time. The close NH?N contact between neighbouring molecules supports strongly the notion that intermolecular hydrogen bonding exists within the crystal lattice, creating a series of molecular chains, which are crosslinked in a three-dimensional array. This intermolecular bonding is suggested to account for the anomalously high melting point of H₂amben (176-178 °C) compared to its H₂salen counterpart (126-128 °C). Although strong intramolecular forces are present in both ligands, H₂salen contains no intermolecular hydrogen bonds.     

Statistical theory for hydrogen bonding fluid system of A_aD_d type(II):Properties of hydrogen bonding networks

Making use of the invariant property of the equilibrium size distribution of the hydrogen bonding clus- ters formed in hydrogen bonding system of AaDd type,the analytical expressions of the free energy in pregel and postgel regimes are obtained.Then the gel free energy and the scaling behavior of the number of hydrogen bonds in gel phase near the critical point are investigated to give the corre- sponding scaling exponents and scaling law.Meanwhile,some properties of intermolecular and in- tramolecular hydrogen bonds in the system,sol and gel phases are discussed.As a result,the explicit relationship between the number of intramolecular hydrogen bonds and hydrogen bonding degree is obtained.     

2-(benzimidazol-2-yl)-3-hydroxychromone derivatives: spectroscopic properties and a possibile alternative intramolecular proton phototransfer

Three 2-(benzimidazol-2-yl)-3-hydroxychromone derivatives were synthesized. Their spectroscopic and fluorescent properties, due to excited state intramolecular proton transfer (ESIPT) from OH to carbonyl, were studied. Theoretical possibility of an alternative intramolecular H-bonding and experimental evidence for such behavior are discussed.      

3-(Aryl)-2-sulfanylpropenoates of mercury(II) and phenylmercury(II)

Compounds [HQ]₂[Hg(L)₂] and [HQ][PhHg(L)] [where HQ = diisopropylammonium cation; L = pspa, fspa, tspa, where p = 3-(phenyl), f = 3-(2-furyl), t = 3-(2-thienyl), and spa = 2-sulfanylpropenoato] have been prepared by the reaction of mercury(II) acetate or phenylmercury(II) acetate with the corresponding acid in the presence of diisopropylamine in ethanol. The compounds have been characterized by elemental analysis, FAB mass spectrometry and IR and NMR (¹H, ¹³C) spectroscopy. The crystal structures of the [HQ]₂[Hg(L)₂] compounds show the presence of diisopropylammonium cations and [Hg(L)₂]²⁻ anions. In each anion the Hg atom is in an HgO₂S₂ environment and this can be described as nido-tbp. The crystal structures of the [HQ][PhHg(L)] compounds show the presence of diisopropylammonium cations and [PhHg(L)]⁻ anions in which the Hg atom adopts an HgCOS distorted T-environment. The NMR data suggest that the coordination mode of the ligand L²⁻ determined by X-ray diffractometry in the solid remains in solution.     

Nickel(II) and zinc(II) complexes of N-substituted di(2-picolyl)amine derivatives: Synthetic and structural studies

The interaction of di(2-picolyl)amine (1) and its secondary N-substituted derivatives, N-(4-pyridylmethyl)-di(2-picolyl)amine (2), N-(4-carboxymethyl-benzyl)-di(2-picolyl)amine (3), N-(4-carboxybenzyl)-di(2-picolyl)amine (4), N-(1-naphthylmethyl)-di(2-picolyl)amine (5), N-(9-anthracenylmethyl)-di(2-picolyl)amine (6), 1,4-bis[di(2-picolyl)aminomethyl]benzene (7), 1,3-bis[di(2-picolyl)aminomethyl]benzene (8) and 2,4,6-tris[di(2-picolyl)amino]triazine (9) with Ni(II) and/or Zn(II) nitrate has resulted in the isolation of [Ni(1)(NO₃)₂], [Ni(2)(NO₃)₂], [Ni(3)(NO₃)₂], [Ni(4)(NO₃)₂]·CH₃CN, [Ni(5)(NO₃)₂], [Ni(6)(NO₃)₂], [Ni₂(7)(NO₃)₄], [Ni₂(8)(NO₃)₄], [Ni₃(9)(NO₃)₆]·3H₂O, [Zn(3)(NO₃)₂]·0.5CH₃OH, [Zn(5)(NO₃)₂], [Zn(6)(NO₃)₂], [Zn(8)(NO₃)₂] and [Zn₂(9)(NO₃)₄]·0.5H₂O. X-ray structures of [Ni(4)(NO₃)₂]·CH₃CN, [Ni(6)(NO₃)₂] and [Zn(5)(NO₃)₂] have been obtained. Both nickel complexes exhibit related distorted octahedral coordination geometries in which 4 and 6 are tridentate and bound meridionally via their respective N₃-donor sets, with the remaining coordination positions in each complex occupied by a monodentate and a bidentate nitrato ligand. For [Ni(4)(NO₃)₂]·CH₃CN, intramolecular hydrogen bond interactions are present between the carboxylic OH group on one complex and the oxygen of a monodentate nitrate on an adjacent complex such that the complexes are linked in chains which are in turn crosslinked by intermolecular offset π-π stacking between pyridyl rings in adjacent chains. In the case of [Ni(6)(NO₃)₂], two weak CH?O hydrogen bonds are present between the axial methylene hydrogen atoms on one complex and the oxygen of a monodentate nitrate ligand on a second unit such that four hydrogen bonds link pairs of complexes; in addition, an extensive series of π-π stacking interactions link individual complex units throughout the crystal lattice. The X-ray structure of [Zn(5)(NO₃)₂] shows that the metal centre once again has a distorted six-coordinated geometry, with the N₃-donor set of N-(1-naphthylmethyl)-di(2-picolyl)amine (5) coordinating in a meridional fashion and the remaining coordination positions occupied by a monodentate and a bidentate nitrato ligand. The crystal lattice is stabilized by weak intermolecular interactions between oxygens on the bound nitrato ligands and aromatic CH hydrogens on adjacent complexes; intermolecular π-π stacking between aromatic rings is also present.     

Synthesis and spectroscopic studies of trans-bis-(3,5-dimethyl-4-nitrosopyrazole) dimer

Bis-(3,5-dimethyl-4-nitrosopyrazole) dimer was prepared by reaction of acetyl acetone with nitrous acid and condensation with hydrazine. Spectroscopic techniques, including IR, UV, ¹H NMR, and ¹³C NMR, and CHN analysis were used to identify the product.     

An NMR, IR and theoretical investigation of (1)H chemical shifts and hydrogen bonding in phenols

The change in (1)H NMR chemical shifts upon hydrogen bonding was investigated using both experimental and theoretical methods. The (1)H NMR spectra of a number of phenols were recorded in CDCl(3) and DMSO solvents. For phenol, 2- and 4-cyanophenol and 2-nitrophenol the OH chemical shifts were measured as a function of concentration in CDCl(3). The plots were all linear with concentration, the gradients varying from 0.940 (phenol) to 7.85 (4-cyanophenol) ppm/M because of competing inter- and intramolecular hydrogen bonding. Ab initio calculations of a model acetone/phenol system showed that the OH shielding was linear with the H...O=C distance (R) for R < 2.1 A with a shielding coefficient of - 7.8 ppm/A and proportional to cos(2)phi where phi is the H...O=C--C dihedral angle. Other geometrical parameters had little effect. It was also found that the nuclear shielding profile is unrelated to the hydrogen bonding energy profile. The dependence of the OH chemical shift on the pi density on the oxygen atom was determined as ca 40 ppm/pi electron. This factor is similar to that for NH but four times the value for sp(2) hybridized carbon atoms. The introduction of these effects into the CHARGE programme allowed the calculation of the (1)H chemical shifts of the compounds studied. The CHARGE calculations were compared with those from the ACD database and from GIAO calculations. The CHARGE calculations were more accurate than other calculations both when all the shifts were considered and also when the OH shifts were excluded. The calculations from the ACD and GIAO approaches were reasonable when the OH shifts were excluded but not as good when all the shifts were considered. The poor treatment of the OH shifts in the GIAO calculations is very likely due to the lack of explicit solvent effects in these calculations.     

Solid state NMR study of hydrogen bonding, miscibility, and dynamics in multiphase polymer systems

The application of solid state NMR (SS NMR) to the study of multiphase polymer systems is growing rapidly. This article aims to provide an overview of the current state of development of this field, paying particular attention to the study of hydrogen bonding in hydrogen-bonded polymer materials through SS NMR investigations. The effection of hydrogen bonds on the miscibility, phase separation and dynamic behavior of selected systems will also be discussed, based on work during the last 10 to 15 years.     

Heteroleptic tin (II) dialkoxides stabilized by intramolecular coordination Sn(OCH2CH2NMe2)(OR) (R = Me, Et, Pr, Bu, Ph). Synthesis, structure and catalytic activity in polyurethane synthesis

A straightforward method of synthesis of heteroleptic tin (II) alkoxides stabilized by one intramolecular coordination bond was developed. Addition of one equivalent of dimethylamino ethanol to diamide Sn(N(SiMe₃)₂)₂ (5) yields alkoxy-amido derivative Sn(OCH₂CH₂NMe₂)(N(SiMe₃)₂) (2). Further addition of alcohol leads to corresponding heteroleptic dialkoxides Sn(OCH₂CH₂NMe₂)(OR) (R = Me (6), Et (7), ⁱPr (8), ^tBu (9), Ph (10)). Catalytic activity of tin (II) compounds in polyurethane formation was tested.     

Studies of intramolecular hydrogen bonds (IMHB): crystal and molecular structure of 2-(2′-hydroxy-phenyl)imidazoles

The molecular and crystal structure of 2-(2′-hydroxyphenyl)imidazole (2) and 1-methyl-2-(2′-hydroxyphenyl)imidazole (5) have been determined by X-ray analysis. Compound (2) presents a strong intramolecular hydrogen bond (IMHB) responsible for the planarity of the molecule. In both compounds the molecules form chains through N---H…O (compound 2) and O---H…N hydrogen bonds (compound 5) but giving rise to the same packing mode. Ab initio calculations (6–31G**) have been carried out on both compounds in order to study the effect of the IMHB on the structure.     

Infrared studies on hydrogen bonding interaction between acrylic esters with 1-dodeconal and phenol in carbon tetrachloride

The influence of the hydroxyl group in 1-dodeconal and phenol on the carbonyl vibration of representative compounds belonging to methyl methacrylate, ethyl methacrylate and butyl methacrylate in carbon tetrachloride has been studied by Fourier transform infrared spectroscopic method. The integrated intensities and change in dipole moments for O–H and C=O bonds were calculated. The formation constants of the 1 : 1 complexes have been calculated using Nash's method. The values of the formation constant and Gibbs energy vary with the ester chain length, which suggests that the strengths of the intermolecular hydrogen bonds (O–H ··· O=C) are dependent on the alkyl group of the acrylic ester and the results show that the proton accepting ability of acrylic esters is in the order methyl methacrylate < ethyl methacrylate < butyl methacrylate. The strength of the intermolecular C=O: HO bonds is also shown to be dependent on the basicity of the C=O group of acrylic esters and the acidity of the proton donor.     

Synthesis,structures and magnetic properties of copper (II) and cobalt (II) complexes containing pyridyl-substituted nitronyl nitroxide and 3,5-dinitrobenzoate

Four new metal-radical complexes - [Cu(NIT3Py)₂(DTB)₂] 1, [Co(NIT3Py)₂(DTB)₂(CH₃OH)₂] 2, [Cu(NIT4Py)₂(DTB)₂(H₂O)₂] 3, [Co(NIT4Py)₂(DTB)₂(H₂O)₂] 4, (NIT3Py = 2-(3^′-pyridyl)-4,4,5,5-tetramethylimidazoline-1-oxyl-3-oxide], NIT4Py = 2-(4^′-pyridyl)-4,4,5,5-tetramethylimidazoline-1-oxyl-3-oxide], DTB = 3,5-dinitrobenzoic anion) have been synthesized by using transition metal ions, nitronyl nitroxide radicals as spin carriers, and incorporating 3,5-dinitrobenzoic acid (DTB) as a coligand.