A 3D interpenetrating supramolecular compound based on Cu ··· N weak coordination: synthesis,crystal structure and DFT investigation

A metal-organic hybrid compound, Cu[(pyc)₂(4,4′-bipy)] ·?H₂O (pyc =?pyridine-2-carboxylate, 4,4′-bipy =?4,4′-bipyridine), has been hydrothermally synthesized and characterized by X-ray determination, IR and elemental analysis. The compound crystallizes in tetragonal, space group I4₁/acd with a =?24.797(2) Å, b =?24.797(2) Å, c =?14.811(2) Å, β =?90°, V =?9106.7(18) ų, C₂₂ H₁₈N₄O₅Cu, Mr =?481.94, Dc =?1.406 g cm^?3, μ(Mo-Kα) =?0.999 mm^?3, F(000) =?3952, Z =?16, the final R =?0.0712 and wR =?0.1886 for 21727 observed reflections (I >?2σ). Compound 1 exhibits a three-dimensional interpenetrating network induced by weak Cu ··· N noncovalent interaction, C–H ··· π?and π–π interactions. Based on crystal data, quantum chemistry calculation at the DFT/B3LPY level was used to reveal the electronic structure of 1.     

Synthesis,crystal structure,and magnetic properties of a salt containing [Cu2Cl7]3− and 4-nitrobenzyl-4′-dimethylaminopyridinium

A new salt, [NO₂BzDMAP]₃[Cu₂Cl₇]?·?H₂O (1), has been synthesized, where [NO₂BzDMAP]⁺ is 1-(4′-nitrobenzyl)-4-dimethylaminopyridinium. Herein, the synthesis, spectral and structural characterization, and magnetic behavior of 1 are reported. It is orthorhombic, with space group Pca2₁, and a?=?26.639(2)?Å, b?=?9.638(1)?Å, and c?=?20.011(2)?Å with V?=?5137.5(7)?ų for Z?=?4. The anion shows a chloride-bridged binuclear structure with Cu?···?Cu distance of 3.872?Å; the two Cu(II) ions have a tetrahedral geometry. The cations stack through p?···?π and π?···?π interactions, and a complicated hydrogen-bonding network structure is formed through C–H?···?Cl and C–H?···?O hydrogen bonds. The variable temperature magnetic susceptibility measurements reveal that 1 exhibits strong antiferromagnetic interaction with J?=??193.0?cm^?1.     

A one-dimensional assembly of a Keggin tungstogermanate and sodium-pyridine-2-carboxylic acid: NaH3(C6H5N2)4[GeW12O40] · 7H2O

A hybrid inorganic-organic assembly, NaH₃(C₆H₅NO₂)₄[GeW₁₂O₄₀] ·?7H2O (1), has been synthesized and characterized by IR, UV, ¹H NMR and single crystal X-ray diffraction. Crystal data: orthorhombic, P2₁2₁2₁, a =?12.819(2) Å, b =?19.326(3) Å, c =?24.164(4) Å, V =?5986.4(18) ų, Z =?4, R ₁ =?0.0541 (I >?2σ). The structure of 1 is based on a 1D zigzag infinite chain assembled by alternating [GeW₁₂O₄₀]^4? and sodium-pyridine-2-carboxylic complex [Na(C₆H₅NO₂)3(H₂O)₂]⁺ via W–O_d–Na–O_d–W.     

Hydrothermal synthesis and crystal structure of a heteropolyoxotungstate formed by sandwich-type heteropolyanion [Gd(PW11O39)2]11− and reduced [Cu(en)2] + cations

A heteropolyoxotungstate, [Cu(en)₂]₂H₈[Gd(PW₁₁O₃₉)₂] ·?(H₂en)_0.5 ·?3H₂O (1), has been hydrothermally synthesized and characterized by IR, XPS, TGA and single-crystal X-ray diffraction. Compound 1 crystallizes in the triclinic system, space group P 1, with a =?12.651(2) ų, b =?20.559(3) ų, c =?21.729(3) ų, α =?71.379(2), β =?82.829(2), γ =?75.532(2)°, V =?5179.5(14) ų, Z =?2, R ₁ =?0.0702 and ωR ₂ =?0.1479. The heteropolyanion is composed of two monovacant [α-PW₁₁O₃₉]^7? Keggin moieties linked via a Gd atom leading to a sandwich-type structure. The Gd center is in a distorted square antiprismatic coordination environment with eight oxygen atoms, four from each of the two [α-PW₁₁O₃₉]^7?moieties.     

Synthesis,characterization and antimicrobial activity of five metal complexes of N -acetyl-9-hydroxyl-fluorene-9-hydrazide

Five mononuclear metal (Mn, Co, Ni, Cu, Zn) complexes have been prepared using a monoanionic tridentate ligand N-acetyl-9-hydroxyl-fluorene-9-hydrazidate (ahfhz^?) and characterized by elemental analysis, ESI-MS, IR, UV, ¹H NMR and ¹³C NMR. Antibacterial screening data showed that the cobalt and copper complexes and Hahfhz have moderate antimicrobial activity. The five metal complexes have some antagonistic effect against the ligand to Gram⁺ bacteria Staphylococcus aureus and Bacillus subtilis. The decrease in the efficiency of metal complexes may be assigned to the zero charge of the central core. [Co(ahfhz)₂] ·?2CH₃OH (3) crystallizes in monoclinic system with space group P2₁ /n, a =?13.1379(7) Å, b =?17.7809(10) Å, c =?14.7403(8) Å, β =?110.0580(10)°; in the crystal structure packing N–H ··· O, O–H ··· O and C–H ··· π?hydrogen bonding interactions lead to a supramolecular structure.     

A linear chain polymer {Ag2[S2P(OC2H5)2]2(bix)} n with multiple emission and red luminescence

The linear chain {Ag₂[S₂P(OC₂H₅)₂]₂(bix)} _n 1 was obtained from reaction of Ag[S₂P(OC₂H₅)₂] with bix (bix =?1,4-bis(imidazole-l-ylmethyl)benzene). Compound 1 consists of a dinuclear module with intramolecular Ag ··· Ag interactions (2.9842(5) Å). This interaction shows a profound influence on the observed multiple luminescence emissions for 1. Crystal data for 1 at 293(2) K: Space group P 1, a =?9.7158(1), b =?9.8273(2), c =?10.0758(2) Å, α =?70.989(1), β =?89.308(1), γ =?63.868(1)°, V =?806.75(2) ų, Z =?1, R ₁ =?0.0294.     

An ion-pair complex [TTF][Pd(mnt)2]: synthesis,crystal structure,magnetic property,and electrical conductivity

A new ion-pair complex, [TTF][Pd(mnt)₂] (1), where TTF⁺ =?tetrathiafulvalene and mnt^2??=?maleonitriledithiolate, was synthesized and characterized structurally. Compound 1 crystallizes in triclinic space group P-1, with a?=?8.008(5)?Å, b?=?11.333(8)?Å, c?=?11.373(6)?Å, α?=?108.112(7)°, β?=?91.550(5)°, γ?=?95.232(5)°, and V?=?975.2(11)?ų. The [TTF]⁺ cations (C) and [Pd(mnt)₂]^? anions (A) form mixed stacks in …AACCAACC… fashion, and the neighboring mixed stacks are held together via van der Waals forces in the crystal. Compound 1 shows weak Curie/Weiss-type magnetic behavior from 2 to 370?K; theoretical investigation disclosed the existence of strongly antiferromagnetic coupling in both [Pd(mnt)₂]₂ ^2? and [TTF]₂ ²⁺ dimer pairs via frontier orbitals overlap mechanism and weakly ferromagnetic coupling between the face-to-face overlapped [TTF]⁺ and [Pd(mnt)₂]^? via spin polarization mechanism within a mixed stack. The powdered pellet electrical conductivity measurement indicated that 1 shows semiconductor character with activation energy of 1.1(3)?eV.     

Synthesis and structures of two cobalt complexes [NaCoII(NTA)(H2O)] n and NH4[CoIII(IDA)2] · 2H2O

Two cobalt complexes [NaCo^II(nta)(H₂O)] _n (H₃nta?=?nitrilotriacetic acid) (1) and NH₄[Co^III(ida)₂]?·?2H₂O (H₂ida?=?iminodiacetic acid) (2) have been synthesized and characterized by single-crystal X-ray diffraction analysis. Compound 1 crystallizes in the orthorhombic system, space group P2₁2₁2₁ with a?=?7.9770(12)?Å, b?=?9.7613(15)?Å, c?=?12.1945(18)?Å, V?=?949.5(2)?ų, Z?=?4, and R ₁?=?0.0705 for 1597 observed reflections. Compound 2 crystallizes in the monoclinic system, space group P2(1)/c with a?=?5.1801(3)?Å, b?=?11.2073(6)?Å, c?=?12.2891(7)?Å, V?=?707.09(7)?ų, Z?=?2, and R ₁?=?0.0349 for 1143 observed reflections. In compound 1, the Co is coordinated by a nitrogen and five oxygen atoms in a distorted octahedral geometry {CoNO₅}, and the Na is coordinated by one water molecule and four carboxyl oxygen atoms in slightly distorted square pyramidal geometry. The entire structure shows a three-dimensional network. In compound 2, Co atom is equatorially coordinated by two ida ligands in a distorted octahedral geometry {CoN₂O₄}. The discrete [Co(ida)₂]^2? anions are linked by hydrogen bonding to a three-dimensional supramolecular network.     

Ternary copper(II) complex of 1,10-phenanthroline and L-glycine: crystal structure and interaction with DNA

A ternary copper(II) complex, [Cu(phen)(L-Gly)(H₂O)] ·?NO₃ ·?1.5H₂O (phen =?1,10-phenanthroline, L-Gly =?L-glycine), has been synthesized and structurally characterized. The complex crystallized in a monoclinic system with space group C2/c, a =?20.572(3) Å, b =?6.9987(10) Å, c =?23.561(3) Å, β?= 98.776(5)°. The five-coordinate copper(II) center is a distorted square pyramid. Absorption spectra, fluorescence spectra and viscosity measurements showed interaction between the copper complex and DNA through an intercalative mode. The complex exhibited efficient DNA cleavage activity at micromolar concentration in the presence of ascorbate with hydroxyl radicals as the active species.     

A new organic-inorganic hybrid material constructed from Keggin polyanion and transition metal complexes: [Co(2,2′-bipy)3]1.5[SiWVWVI 11O40Co(2,2′-bipy)2(H2O)] · 0.5H2O

A new organic-inorganic hybrid compound constructed from Keggin-type polyanion clusters and transition metal complexes, [Co(2,2′-bipy)₃]_1.5[SiW^VW^VI ₁₁O₄₀Co(2,2′-bipy)₂(H₂O)] ·?0.5H₂O (1), has been hydrothermally prepared and characterized by elemental analysis, IR, UV–Vis, TG-DTA and single crystal X-ray diffraction. Compound 1 crystallized in the monoclinic system, space group C2/c, a =?46.995(15), b =?14.487(5), c =?26.205(9)Å, β =?90.000(0)°, V =?17841(10)ų, Z =?4. Compound 1 contains a [SiW^VW^VI ₁₁O₄₀Co(2,2′-bipy)₂(H₂O)]^3? polyoxoanion in which [Co(2,2′-bipy)₂(H₂O)]²⁺ is covalently bonded to the α-Keggin-type heteropolyanion [SiW^VW^VI ₁₁O₄₀]^5? via a terminal oxygen.     

Synthesis,structural, photophysical and thermal properties of some praseodymium(III) complexes

Some carboxylato-bridged praseodymium(III) complexes (1–5) having tp [hydrotris(pyrazol-1-yl)borate] and sodium p-X-benzoate (where X =?H, F, Cl, NO₂) have been synthesized and characterized by different techniques including X-ray crystallography. The X-ray studies demonstrated that 1, 3 and 5 crystallized in triclinic space group P 1 with cell dimensions a =?11.761(13) Å, b =?12.536(13) Å, c =?17.726(19) Å for 1, a =?9.309(8) Å, b =?12.667(11) Å, c =?14.421(12) Å for 3, a =?11.5688(9) Å, b =?12.0055(9) Å, c =?12.3005(10) Å for 5. In 1–4 the coordination number of praseodymium is seven, whereas in 5 it is eight. IR suggested that the benzoate groups in 1–5 are bidentate bridging. The photophysical properties of these complexes have been studied in solution at room temperature. Thermogravimetric analysis showed that these complexes undergo complete decomposition with formation of praseodymium oxide.     

A 1-D alternating copper(II) chain based on three acetate-bridging modes: synthesis,crystal structure,DNA binding and magnetic properties

A new 1-D alternating copper(II) polymer, [Cu₂(L)(OAc)₄]_n (1) (L = 5-chloro-2-(pyridine-2-yl)benzo[d]thiazole), has been isolated and characterized by single-crystal X-ray diffraction, elemental analysis, IR spectroscopy, and magnetic susceptibility. The complex crystallized in the triclinic space group P-1, a = 8.2277(16) Å, b = 9.4233(19) Å, c = 15.831(3) Å, α = 103.38(3)°, β = 99.95(3)°, γ = 92.70(3)°, V = 1171.3(4) Å³, and comprises a 1-D polymer linked by three kinds of acetate-bridging modes in an alternating manner. UV–visible and fluorescence spectra revealed that 1 is bound to CT-DNA in a partial intercalation mode. Through gel electrophoresis assays, 1 displayed an efficient oxidative cleavage activity on supercoiled plasmid DNA (pUC19) in the presence of H₂O₂. Magnetic measurements were performed from 2 to 300 K, and the experimental results were satisfactorily reproduced with J₁ = –160 ± 20 cm^?1, J₂ = 5.8 ± 0.2 cm^?1, zJ′ = 0.381 ± 0.005 cm^?1 and g = 2.1, showing antiferromagnetic coupling between Cu1 and Cu1i, ferromagnetic exchange between Cu2 and Cu2ii, and a weak ferromagnetic molecular field correction accounting for all interspecies interactions.     

Synthesis,crystal structure and magnetic properties of 2D bi-layered coordination polymer

A new coordination polymer, [Ni(pydc)(H₂O)₂]?·?H₂O (1) (H₂pydc?=?pyridine-3,4-dicarboxylic acid), have been synthesized by treating Ni(II) nitrate with 3,4-pyridinedicarboxylic acid under hydrothermal conditions. The single-crystal X-ray structure reveals that 1 is a 2D bi-layered coordination polymer. Single-crystals are triclinic, space group P 1 , with a?=?7.065(3), b?=?7.812(4), c?=?9.031(4)?Å, α?=?75.568(8), β?=?68.970(8), γ?=?75.927(8)°, V?=?444.0(3)?ų, Z?=?2. Variable temperature magnetic susceptibility measurements demonstrate a ferromagnetic interaction in 1.     

Synthesis of 2-D graphite-like and 3-D diamond-like silver(I) polymers with 1,3-imidazolidine-2-thione

Two metal–organic coordination polymers, [Ag₂(imdt)₃(OAc)₂] _n (1) (imdt = 1,3-imidazolidine-2-thione, OAc = CH₃COO^?) and [Ag(imdt)Cl] _n (2), were synthesized under similar conditions by using Et₃N (triethylamine) as buffering agent. X-ray diffraction shows that 1 crystallizes in the monoclinic system, C2 /c space group, a = 13.822(5) Å, b = 9.082(3) Å, c = 16.965(6) Å, V = 2114.2(14) ų, Z = 8, D _c = 2.012 g cm^?3. Compound 2 crystallizes in the orthorhombic system, P2₁2₁2₁ space group, a = 7.993(6) Å, b = 7.993(6) Å, c = 10.548(7) Å, V = 673.9(7) ų, Z = 4, D _c = 2.419 g cm^?3. Both 1 and 2 exhibit different architectures due to their different anions. Compound 1 shows a 2-D graphite-like network structure and 2 shows a 3-D diamond-like network structure.     

Complicated weak interactions in a hybrid material containing tetra(isothiocyanate)cobalt(II) and 1,1′-ethylene-2,2′-dipyridinium: synthesis,crystal structure,and magnetic properties

A new inorganic–organic hybrid material, [EtdiPy][Co(NCS)₄] (1) ([EtdiPy]²⁺?=?1,1′-ethylene-2,2′-dipyridinium), was synthesized and characterized by elemental analysis, IR spectrum, UV-Vis spectrum, ESI-MS, and single-crystal X-ray diffraction. Compound 1 is monoclinic, space group P2₁/n, with a?=?21.691(5)?Å, b?=?8.639(2)?Å, c?=?21.748(5)?Å, β?=?90.124(3)°, V?=?4075.1(16)?ų, D _c?=?1.550?g cm^?3, Z?=?8, F(000)?=?1928, and R ₁?=?0.0435. The C–H···S hydrogen bond, short S···C, S···N interactions, p···π, and π···π interactions observed in the solid state of 1 give a 3-D structure. Magnetic measurements from 2 to 300?K have shown weak antiferromagnetic exchange with θ?=??0.892?K in 1.     

A copper(II) complex with 2-(2′-pyridyl)benzimidazole and l-arginine: synthesis,structure, antibacterial activities,and DNA interaction

A Cu(II) complex with 2-(2′-pyridyl)benzimidazole and l-arginine has been synthesized and investigated by elemental analysis, molar conductivity, IR, UV/vis, and X-ray diffraction. The complex crystallizes in the triclinic space group P1 with six molecules in a unit cell of dimensions a?=?10.6397(5)?Å, b?=?19.2178(8)?Å, c?=?20.0387(9)?Å, α?=?75.3670(10)°, β?=?79.4670(10)°, γ?=?87.4470(10)°, V?=?3897.6(3)?ų, R ₁?=?0.0408, and wR ₂?=?0.0502. The complex contains six crystallographically independent complexes, Cu1, Cu2, Cu3, Cu4, Cu5, and Cu6, which have a distorted square-pyramidal geometry. The complex was screened for its in vitro antibacterial activities against two Gram-positive (Bacillus subtilis and Staphylococcus aureus) and two Gram-negative (Escherichia coli and Salmonella) micro-organisms. The complex exhibited good antibacterial activities against the micro-organisms compared with HPB and Cu(ClO₄)₂. Interaction of the complex with DNA was studied by electronic absorption spectroscopy, fluorescence spectroscopy, circular dichroic spectroscopy, viscosity measurements, and agarose gel electrophoresis. Results suggest that the complex could bind to CT-DNA via partial intercalation, and cleave the plasmid DNA with involvement of hydroxyl radicals, and probably singlet oxygen-like copper-oxo species in the presence of ascorbate.     

Synthesis and structures of three triphosphonate compounds containing d10 transition metal ions

Three new triphosphonate compounds, [Zn(APTPH₄)(2,2′-bipy)(H₂O)]?·?2H₂O (1), [Cd(APTPH₄)(2,2′-bipy)(H₂O)]?·?2H₂O (2), and [Zn(APTPH₄)(phen)₂]?·?phen?·?4H₂O (3) (APTPH₆?=?1-aminopropane-1,1,3-triphosphonic acid, 2,2′-bipy?=?2,2′-bipyridine, phen?=?1,10-phenanthroline), are synthesized by a low-temperature hydrothermal method. Compounds 1 and 2 are isomorphous, both one-dimensional (1D) coordination polymers expanded into three-dimensional (3D) supramolecular structures by hydrogen bonds and π–π stacking interactions. Compound 3 is a molecular complex and forms a 3D network through an S-shaped water hexamer. Crystal data for 1: Triclinic, space group P 1, a?=?6.6814(5)?Å, b?=?10.0929(7)?Å, c?=?15.438(2)?Å, α?=?81.544(2)°, β?=?79.066(2)°, γ?=?82.278(2)°, Z?=?2; for 2: Triclinic, space group P 1, a?=?6.9380(8)?Å, b?= 10.043(2)?Å, c?=?15.681(2)?Å, α?=?81.357(2)°, β?=?78.510(2)°, γ?=?81.902(2)°, Z?=?2; Crystal data for 3: Triclinic, space group P 1, a?=?12.540(2)?Å, b?=?12.596(2)?Å, c?=?14.997(2)?Å, α?=?100.795(2)°, β?=?113.328(2)°, γ?=?101.358(2)°, Z?=?2.     

Syntheses,crystal structures and magnetic study of two binuclear manganese(II) complexes with aromatic N-oxide as bridging ligand

Two new binuclear complexes, [Mn₂(μ-dmpo)₂(SCN)₄(H₂O)₂] (1) (where dmpo?=?3,5-dimethylpyridine N-oxide), [Mn₂(μ-po)₂(H₂O)₆I₂]I₂ (2) (where po?=?pyridine N-oxide), have been synthesized and their crystal structures determined by X-ray crystallography. Complexes 1 and 2 crystallize in monoclinic, space group P2₁/c, with unit cell dimensions a?=?8.8836(18)?Å, b?=?15.450(3)?Å, c?=?15.484(3)?Å, β?=?91.020(3)° for 1, and a?=?8.8352(13)?Å, b?=?17.927(3)?Å, c?=?8.3338(12)?Å, β?=?103.765(2)° for 2. In each binuclear complex two Mn(II) were bridged by two 3,5-dimethylpyridine N-oxides or by two pyridine N-oxides and the distances between the bridged Mn(II) ions are 3.599?Å for 1 and 3.552?Å for 2. Variable temperature (4–300?K) magnetic measurements were performed for 1 and the susceptibility data were fitted by using a binuclear Mn(II) magnetic coupling formula producing the 2J?=??2.17?cm^?1.     

Manifestations of noncovalent interactions in the solid state. Dimeric and polymeric self-assembly in imidazolium salts via face-to-face cation—cation π-stacking

Abstract

X-ray crystallographic investigation of the tertiary structure of simple 1-methylimidazolium (1-Meim) salts reveals that cation—cation face-to-face π—stacking with interplanar separations in the range typically seen for molecule—molecule and molecule—cation interactions are possible. Two salts are reported. 1-Meim-CF₃SO₃, 1, exists as a centrosymmetric dimer with an interplanar separation of only 3.16 Å. The two imidazolium rings are slipped to the extent that the interaction can be regarded as a manifestation of C—H…C—H dipole interactions. 1-Meim-NO₃ exists as a one-dimensional (1-D) polymer with interplanar separations of 3.65 Å. The cations are not as severely slipped as for 1 and the interactions can be regarded as the result of cation—cation and anion—anion complementary electrostatics. Semi-empirical calculations are used to rationalize the π-π stacking in both 1 and 2. Crystal data: 1-Meim-CF₃SO₃, 1, triclinic, P1, a=6.416(3) Å, b=7.617(4) Å, c=9.569(4) Å, α=85.36(4)°, β=86.08(3)°, γ=85.18(4)°, V=463.6(4) Å,³ Z=2, D_c =1.66 g cm^?3, μ=3.7 cm^?1, T=17°C, R=0.054 and R _w=0.076 for 1241 reflections; 1-Meim-NO₃, 2, monoclinic, P2₁/c, a=9.009(7) Å, b=9.988(6) Å, c=7.308(5) Å, β=94.93(6)°, V=655.2(8) Å,³ Z=4, D_c =1.47 g cm^?3, μ=1.2 cm^?1, T=17°C, R=0.060 and R _w=0.068 for 483 reflections.