Self-assembly of hydrogen-bonded supramolecular structures of two copper(II) 2-bromobenzoate complexes with 4-pyridylmethanol and nicotinamide

The structures of [Cu(2-Brbz)₂(4PM)₂(H₂O)] (1) and [Cu(2-Brbz)₂(NIA)2] · 2H₂O 2 [where 2-Brbz is the 2-bromobenzoate anion, 4-PM is the 4-pyridylmethanol and NIA is nicotinamide] have been determined by X-ray and characterized by EPR spectroscopy. The Cu²⁺ cation in 1 is coordinated by a pair of oxygens from monodentate 2-bromobenzoate anions by a pair of pyridine nitrogens from monodentate 4-pyridylmethanol ligands and finally by a water forming a tetragonal-pyramidal coordination polyhedron. The Cu²⁺ cation in 2 is coordinated by two pairs of oxygens from the asymmetric bidentate 2-bromobenzoate anions and by a pair of pyridine nitrogen atoms from the monodentate nicotinamide in trans positions, forming an extremely elongated bipyramid. The molecules of both complexes are linked by O–H ··· O, C–H ··· O and for 2 by N–H ··· O hydrogen bonds, which create three-dimensional hydrogen-bonding networks. EPR spectra of 1 and 2 are in agreement with X-ray data. Nicotinamide as well as 4-pyridylmethanol are suitable ligands for construction of hydrogen bonding coordination polymers.     

Different coordination modes and supramolecular aggregations in copper(II) pentane-2,4-dionato compounds with 2-pyridone and 3-hydroxypyridine

Abstract  

Copper(II) bis(pentane-2,4-dionato-κ² O,O′) compounds with 2-pyridone (1) and 3-hydroxypyridine (2) were prepared by the reaction of bis(pentane-2,4-dionato-κ² O,O′)copper(II) with selected ligands. The coordination of Cu(II) in both compounds is square pyramidal with the fifth coordination site occupied by the carbonyl oxygen atom of the 2-pyridone ligand in 1 and by the nitrogen atom of 3-hydroxypyridine in 2. The X-ray crystallographic studies revealed different crystal aggregation influenced by the ability of the 2-pyridone ligand to act as a hydrogen bond donor and acceptor, and 3-hydroxypyridine acting only as a hydrogen bond donor. Intermolecular N–H···O hydrogen bonding forms dimers in 1 and infinite chains in 2. Three-dimensional aggregation is achieved by π–π interactions and C–H···π (arene) hydrogen bonding.     

Three new pyridine-2,6-dicarboxylate copper(II) compounds with coordinated pyridine-based ligands: Synthesis, characterisation and crystal structures

Three new Cu(II) compounds of pyridine-2,6-dicarboxylic acid (H₂pdc) with meta-substituted pyridines as additional ligands have been synthesized and structurally characterised using X-ray diffraction. Two of them are mononuclear compounds, i.e. [Cu(pdc)(3acpyr)(H₂O)] (1) (3acpyr = 3-acetylpyridine) and [Cu(pdc)(3HOp)(H₂O)](H₂O)₂ (2) (3HOp = 3-hydroxypyridine). The third compound is polynuclear, i.e. [Cu(pdc)(μ-3HOmp-κN,O)]_n (3) (3HOmp = 3-(hydroxymethyl)pyridine). The three compounds are also characterised by IR, EPR and ligand field spectroscopy. The geometry around the Cu(II) ions is distorted square pyramidal for compounds 1 and 2 and distorted octahedral for compound 3. The lattice of compound 1 is organised by an intra-sheet hydrogen-bond pattern generating double layers. Compound 2 has a lattice arranged by the two water molecules in the lattice with complicated 2D O-H?O intra-sheet hydrogen bonding motifs.The zig-zag chains in compound 3 are further organised in layers, due to the axial coordination at Cu(II), forming a so-called (4, 3) ladder-like one-dimensional coordination polymer. These ladders are interconnected by hydrogen bonding.     

Self-assembly and crystal structure of a three-dimensional copper(II) complex

A copper(II) complex of a sulfonate derivative of chrysin, 5,7-bihydroxyflavone-6-sulfonate, Cu(C₁₅H₈O₇S)(3H₂O), has been prepared. The complex was characterized by elemental analysis, spectroscopic measurements and single-crystal X-ray diffraction studies. It crystallizes in the monoclinic space group C2/c, with a?=?16.036(18), b?=?6.944(8), c?=?28.03(3)?Å, β?=?94.463(17)°, V?=?3112(6)?ų, Z?=?8. In the complex, Cu(II) is five-coordinate and all donors are oxygen atoms. Hydrogen bonds and π–π stacking interactions in the crystal lead to the formation of a three-dimensional supramolecular motif.     

A new oxamido-bridged dinuclear copper(II) complex with large antiferromagnetic exchange interactions

A new oxamido-bridged dinuclear compound [Cu₂(µ-pmox)(DMF)₄]?·?2ClO₄ (1) (H₂pmox?=?N,N′-bis-(2-methylpyridyl)oxalamide, DMF?=?dimethylformamide) was synthesized and structurally characterized. The five-coordinate Cu(II) is bridged by oxamido groups and further cross-linked by C–H···O hydrogen bonds between the uncoordinated oxygen of perchlorate and methyl of DMF. The complex was also characterized by infrared spectroscopy and magnetic measurement. The copper complex exhibits strong antiferromagnetic interactions via the trans oxamido bridge with J of ?414?cm^?1, where J is the exchange parameter in the isotropic Hamiltonian H?=??JS₁S₂.     

Structural diversity of a series of chlorocadmate(II) and chlorocuprate(II) complexes based on benzylamine and its N-methylated derivatives

Protonated benzylamine and its N-methylated derivatives, [C₆H₅CH₂NH_3?n(CH₃)_n]⁺ (n?=?0?3), have been adopted as cations in chlorocadmate(II) and chlorocuprate(II) complexes, showing inorganic–organic hybrid architectures. For the Cd(II) compounds, the anionic structures vary from perovskite-type layers (n?=?0) to chains (n?=?1–3). For Cu(II) compounds, the anionic structures range from perovskite-type layers (n?=?0), chains (n?=?1) to mononuclear species (n?=?2–3). Coordination geometries of the metal ions and intermolecular interactions have been analyzed. Their dielectric properties have been measured.     

Synthesis and crystal structure of bis(m-hydroxybenzoato(1-))bis(benzimidazole) copper(II) dihydrate

The crystal structure of the title complex was determined by single-crystal X-ray diffraction methods. The unit cell contains two independent molecules, A and B. B is a mononuclear Cu(II) complex with square-planar coordination geometry formed by two benzimidazole molecules and two hydroxylbenzoate anions. A is a dimer of B, formed by bridging hydroxybenzoate, and copper assumes square-pyramidal geometry. Aromatic π–π stacking is observed between parallel benzimidazole rings of neighboring A molecules. IR spectra of the compound are assigned in line with the crystal structure.     

Structure and magnetic properties of a double out-of-plane carboxylato-bridged Cu(II) compound with pyridine-2-carboxylate

The spectroscopic and magnetic properties, and crystal structure of dark-blue [Cu(2-pca)₂]_n (1), (2-pca = pyridine-2-carboxylate ion) are described. The copper(II) ions are in strongly tetragonally distorted octahedral environments. They are sequentially bridged by a double out-of-plane carboxylate bridge, resulting in the formation of an infinite chain (1D). The equatorial Cu–O bonds (1.957(3) Å) are significantly shorter than the axial bonds (2.737(4) Å). The crystal structure of the compound is stabilized by interchain hydrogen bonds of the C–H?O type. The intrachain copper–copper separation is 5.178(3) Å, whereas the shortest interchain copper–copper distance is 7.614(6) Å. The magnetic properties, investigated in the temperature range 1.8–300 K, revealed the occurrence of a weak intrachain antiferromagnetic coupling, J = −1.04 cm⁻¹, and an interchain exchange interaction, zJ′ = 0.34 cm⁻¹. The title compound appears to be a polymorphic form of the blue-violet compound (2) of identical stoichiometry, the X-ray structure of which was recently reported. Magneto-structural correlations in 1 have been made considering both the carboxylato bridging group and the existence of interchain hydrogen bonds. The structure and magnetic properties of 1 are compared with those of the polymorphic form 2.     

Experimental and ab initio calculational studies on nitrato[2,4-dichloro-6-((pyridin-2-ylmethylimino)methyl)phenolato]copper(II)

The mononuclear Schiff-base copper(II) compound, [Cu(C₁₃H₉C_l2N₂O)(NO₃)], has been synthesized and characterized by elemental analysis and X-ray single crystal determination. The compound crystallizes in the orthorhombic, space group Cmc2₁ with unit cell dimensions a?=?6.713(1), b?=?22.147(3), c?=?9.976(1)?Å?, M _r?=?405.67, V?=?1483.2(3)?ų, Z?=?4, R ₁?=?0.0568 and wR ₂?=?0.1331. X-ray structure determination revealed that the compound possesses crystallographic mirror symmetry. The Cu^II ion in the compound is five-coordinate in a distorted trigonal bipyramid with one O and two N atoms of the Schiff-base and by two O atoms of the nitrate anion. In the crystal structure, the molecules are linked via intermoleclular C?H?···?O non-classical hydrogen bonds, forming a two-dimensional network. Density functional theory (DFT) and Hartree-Fock (HF) calculations of the structure, atomic charge distribution and natural bond orbital analyses have been performed. The calculated results show that the Cu^II ion mainly adopts spd² hybridization and forms five bonds with the NNO donor set of the Schiff-base ligand and with two O atoms of nitrate from four orientations. The coordinate stabilization energies show that the Schiff-base copper(II) compound is very stable.     

Hydrothermal synthesis,structures and characterization of two new copper(II) triphosphonate compounds

Two copper(II) triphosphonate compounds, Cu[(APTPH₄)(phen)(H₂O)]?·?2.16H₂O (1) and [Cu(APTPH₄)(2,2′-bipy)(H₂O)]?·?2.63H₂O (2), have been prepared by a low temperature hydrothermal reaction from 1-aminopropane-1,1,3-triphosphonic acid (APTPH₆), CuO and a second ligand, phen?=?1,10-phenanthroline, or 2,2′-bipy?=?2,2′-bipyridyl. These two compounds were characterized by single crystal X-ray diffraction, elemental analysis, IR and TG. Crystal data for 1: Monoclinic, space group P2₁ /c, a?=?14.4830(7)?Å, b?=?9.1721(5)?Å, c?=?16.7403(8)?Å, β?=?90.101(2)°. For compound 2: Triclinic, space group P 1, a?=?7.1215(7)?Å, b?=?10.460(2)?Å, c?=?14.671(2)?Å, α?=?82.983(2)°, β?=?83.882(2)°, γ?=?80.617(2)°. In both compounds, each Cu²⁺ ion is five-coordinate with two oxygen atoms from the triphosphonate, two nitrogen atoms from the second ligand and one water molecule, to form a distorted square-pyramidal geometry. Both complexes have 3D supramolecular structures constructed by hydrogen bonds and π–π stacking interactions.     

Variation in crystalline architectures through supramolecular interactions in copper(II) complexes with tridentate N2O donor Schiff bases

Three copper(II) complexes, [Cu(L¹)(H₂O)(ClO₄)]·0.5H₂O (1), [Cu(L²)(H₂O)(ClO₄)]·0.5H₂O (2), and [Cu(L²)(NCNC(OCH₃)NH₂)]ClO₄ (3), where HL¹ = 4-bromo-2-(-(quinolin-8-ylimino)methyl)phenol and HL² = 1-(-(quinolin-8-ylimino)methyl)naphthalen-2-ol, have been prepared and characterized by elemental analysis, IR, UV–vis and fluorescence spectroscopy and single-crystal X-ray diffraction studies. The copper(II) centers assume five-coordinate square-pyramidal geometries in 1 and 2, whereas square planar copper(II) is present in 3. A methanol molecule has been inserted in the pendant end of the ligated dicyanamide in 3. Various supramolecular architectures are formed by hydrogen bonding, π?π, C–H?π, and lp?π interactions.     

Synthesis and characterization of three ionic pairs of Fe(II) and Co(II) complexes with tridentate salicylideneglycine

Three new transition metal complexes, [Fe^II(H₂O)₆][(C₉H₇NO₃)₂Fe^II] · H₂O (1), H[K(H₂O)₃][(C₉H₇NO₃)₂Co^II] · H₂O (2), and [Co^II(H₂O)₆][(C₉H₇NO₃)₂Co^II] · H₂O (3), with salicylideneglycine have been synthesized and characterized by elemental analysis, IR spectra, UV-Vis spectroscopy, and X-ray crystallography. The structure analyses indicate that the tridentate salicylideneglycine binds through aliphatic nitrogen, phenoxy, and carboxylic oxygen in the anion. There are many inter- and intra-molecular hydrogen bonds among lattice water, the anion, and the cation to form a 3-D network. The thermogravimetric analyses and the quantum chemistry calculations of compounds 1, 2, and 3 are also discussed.     

Kristallzucht und Strukturverfeinerung von Quecksilber(II)‐amidchlorid – HgClNH2

Crystal Growth and Refinement of the Crystal Structure of Mercury(II) Amide Chloride – HgClNH₂ Single crystals were prepared by recrystallization of HgClNH₂ from aqueous NH₃/NH₄⁺ solution at 160 °C. They were used for a single‐crystal X‐ray structure redetermination. The previously reported [W. N. Lipscomb, Acta. Crystallogr. 1951 , 4, 266.] structural topology determined on basis of X‐ray powder diffraction data is now confirmed. However, a higher symmetry is found: Space group type Pmma (instead of Pmm2), a = 6.709(1) Å, b = 4.351(1) Å, c = 5.154(1) Å, Z = 2. The crystal structure contains zig‐zag‐chains [Hg(NH₂)_2/2]⁺. Four Cl atoms complete the coordination sphere of Hg to a distorted octahedron. These share common faces and edges in layers [HgCl_4/4(NH₂)_2/2]. These layers are connected via hydrogen bonds N–H…Cl.     

Syntheses and structures of 2,4-dichloro-6-(cyclopropyliminomethyl)phenol and its copper(II) complex

A new Schiff base ligand, 2,4-dichloro-6-(cyclopropyliminomethyl)phenol, and a copper(II) complex containing it have been synthesized and characterised. The ligand and complex crystallise in space groups Cmca and C2/c, respectively. In the complex, the Cu atom is four-coordinate (distorted tetrahedral), bonded to two imine N and two phenolate O atoms from two Schiff base ligands. Bond lengths associated with the donor atoms in the complex are different to those in the ligand. The structure is compatible with spectra of the bulk sample.     

Syntheses,crystal structures,and urease inhibitory properties of copper(II) and zinc(II) complexes with 2-bromo-4-chloro-6-[(2-dimethylaminoethylimino)methyl]phenol

A new copper(II) complex, [CuL(μ _1,1-N₃)] _n (1), and a new zinc(II) complex, [ZnL(μ ₂-acetato-O, O′)₂] _n (2) (HL = 2-bromo-4-chloro-6-[(2-dimethylaminoethylimino)methyl]phenol), were prepared and characterized by elemental analyses, infrared spectroscopy, and single-crystal X-ray diffraction. Complex 1 is an end-on azide-bridged polynuclear copper(II) complex and 2 is a syn–anti bidentate acetate-bridged polynuclear zinc(II) complex. Each metal in the complex is five-coordinate with square-pyramidal geometry. Complex 1 shows good urease inhibitory properties, while 2 does not.     

Copper(II) coordination compounds with ferulic acid

The first two molecular structures of the ferulic acid (3-(4-hydroxy-3-methoxyphenyl)-2-propenoic acid, C₁₀H₁₀O₄) coordination compounds are presented, namely, [Cu₂(C₁₀H₉O₄)₄(CH₃CN)₂] 1 and [Cu₂(C₁₀H₉O₄)₄(C₆H₆N₂O)₂]·4CH₃CN (C₆H₆N₂O = nicotinamide) 2. Both compounds were synthesised from the starting mixture of Cu₂O and CuCl upon copper oxidation in the acetonitrile solution. The single-crystal X-ray diffraction analysis of 1 and 2 reveals the binuclear structure of the ‘paddle–wheel’ type for both complexes. 1 and 2 are unstable outside mother liquid due to loosely bound acetonitrile molecules. The final products of decomposition are [Cu₂(C₁₀H₉O₄)₄] 1a and [Cu₂(C₁₀H₉O₄)₄(C₆H₆N₂O)₂] 2a, which were characterized by several physico-chemical methods. The triplet X-band EPR spectra of 1a and 2a, showing signals B_Z1  15 mT, B₂  460 mT and B_Z2  580 mT, are in agreement with the expected data for the binuclear tetracarboxylate units, found in the structures of the parent complexes 1 and 2. Together with the room temperature magnetic susceptibility data, μ_eff/B.M. 1.40 (1a), 1.48 (2a), the EPR spectra analysis confirm the antiferromagnetic interaction in 1a and 2a. This is suggesting preservation and stability of the paddle–wheel structures in 1a and 2a.     

Self-assembly of copper(II) complexes with substituted aroylhydrazones and monodentate N-heterocycles: synthesis,structure and properties

Two ternary copper(II) complexes [Cu(L¹)(py)] (1) and [Cu(L²)(Himdz]?·?CH₃OH (2) with substituted aroylhydrazones, 5-bromo-salicylaldehyde-3,5-dimethoxy-benzoylhydrazone (H₂L¹) and 5-bromo-salicylaldehyde-p-methyl-benzoylhydrazone (H₂L²), pyridine (py) and imidazole (Himdz), have been synthesized. Their crystal structures and spectroscopic properties have been studied. In each complex, the metal is in a square-planar N₂O₂ coordination formed by the phenolate-O, the imine-N and the deprotonated amide-O atoms of L^2?, and the sp²?N atom of the neutral heterocycle. In the solid state, 1 exists as a centrosymmetric dimer due to very weak apical coordination of the metal bound phenolate-O. Complex 2 has no such apical coordination and exists as a monomer. Self-assembly via C–H?···?O, N–H?···?O and O–H?···?N interaction leads to a one-dimensional chain arrangement; other non-covalent interactions such as C–H?···?π and π?···?π are not involved.     

Zinc(II) and lead(II) coordination polymers built by 3-(4-carboxyphenylhydrazono)pentane-2,4-dione

Two coordination polymers [Zn(L)₂(4,4′-bipy)₂] _n (4,4′-bipy = 4,4′-bipyridine) (1) and [Pb(η ²-L)(µ₃-η ²-CH₃COO)(H₂O)] _n (2) have been prepared by the reaction of 3-(4-carboxyphenylhydrazono)pentane-2,4-diketone (HL) with zinc(II) or lead(II) in solution. Polymer 1 shows an infinite zigzag chain, in which Zn(II) are linked by 4,4′-bipy bridges with carboxylate of L^? monodentate to Zn(II). In 2, Pb(II) are bridged by tetradentate µ₃-η ²-CH₃COO^? to form a linear 1-D chain, and each Pb(II) is chelated by carboxylate of L^?. Their molecular structures have been characterized by elemental analysis, infrared, and single-crystal X-ray diffraction. Thermal and fluorescent properties of the two complexes have been investigated.     

Polynuclear Cu(II), Ni(II) and Cd(II) coordination compounds with bis(pyrimidin-2-yl)amine and dicyanamide

In this study the synthesis, crystal structure and characterization of three new transition metal polynuclear compounds with formula [Cu(dipm)(μ-dca)₂]_n(H₂O) (1), [Ni(dipm)(μ-dca)₂]_n(C₂H₆O)_1/2 (2) and [Cd(dipm)(μ-dca)₂]_n (3) (in which dipm = bis(pyrimidin-2-yl)amine and dca = dicyanamide) are reported. The isostructural compounds 1 and 2 contain a double-bridging end-to-end dca unit connecting two metal ions and a single bridging end-to-end dca unit between subsequent metals. Compound 3 exhibits only single bridging end-to-end dca units, oriented in three directions, giving rise to a 3D framework.