Computational evidence for a variable first shell coordination of the cadmium(II) ion in aqueous solution

In this paper, we present a state-of-the-art 100 ns molecular dynamics simulation of a cadmium(II) aqueous solution that highlights a very flexible ion first coordination shell which transits between hexa- and heptahydrated complexes. From this investigation, a dynamical picture of the water exchange process emerges that takes place through an associative mechanism for the solvent substitution reaction. Our procedure starts from the generation of an effective two-body potential from quantum mechanical ab initio calculations in which the many-body ion-water terms are accounted for by the polarizable continuum method (PCM). This approach is computationally very efficient and has allowed us to carry out extremely long molecular dynamics simulations, indispensable to reproduce the dynamic properties of the cadmium(II) aqueous solution. Quantum mechanical ab initio calculations of the hexa- and heptahydrated complexes extracted from MD configurations have revealed stable minima for both clusters with the water molecules arranged in T(h)() and C(2) symmetries in the hexa- and heptahydrated complexes, respectively, with a slight energetic preference for the heptahydrated one. Finally, a comparison of the calculated hexa- and heptahydrated cluster IR and Raman spectra with the experimental data in the literature, has demonstrated that the IR spectroscopy is not able to distinguish between the two species, whereas the Raman spectrum of the Cd(2+)-(H(2)O)(7) cluster provides a better agreement with the experimental data.     

Relationships between Hg(II)-S bond distance and Hg(II) coordination in thiolates

Extended X-ray absorption fine structure (EXAFS) spectroscopy is a sensitive structural probe of the coordination environments of Hg(II) with thiol (sulfhydryl) groups, and is equally applicable to solid and aqueous organic or inorganic matter. Information on the number and geometric arrangement of S ligands can be derived from metal-ligand distances because the distances vary with Hg stereochemistry and can be accurately measured by the EXAFS technique. To improve the reliability of determining coordination structures of Hg with thiol groups, correlations among Hg-S bond distance, Hg coordination, and S-Hg-S angle in homoleptic Hg(II)-thiolates were calculated from analysis of the structures of the 162 Hg(SR)n motifs (n = 2, 3, 4) contained in the Cambridge Structural Database v. 5.28. Graphical correlations of bond distance with coordination number and with bond angle show distinct ranges of values characteristic of specific structural configurations.     

Axial structure of the Pd(II) aqua ion in solution

Solution chemistry of Pd(II) and Pt(II) complexes is relevant to many fields of chemistry given the widespread applications of their compounds in homogeneous and heterogeneous catalysis, intermediate reaction synthesis, and antitumoral drugs. The well-defined square-planar arrangement of their complexes contrasts with the rather diffuse axial environment in solution. A theoretical proposal for a characteristic hydration shell in this axial region, called the meso-shell, stimulated further experimental and theoretical studies which have led to different pictures. The present work characterizes the structure of the axial region of the Pd(II) aqua ion in solution using a combination of neutron and X-ray diffraction and extended X-ray absorption fine structure (EXAFS) spectroscopy, with empirical potential structure refinement (EPSR). The results confirm the existence of the axial region and structurally characterize the water molecules within it. An important finding not previously reported is that the counterion, in this case the perchlorate anion, competes with water molecules for the meso-shell occupancy. The important role played by the axial region in many ligand substitution reactions is therefore intimately connected with the presence of the counterion and not just hydration water. This must call the attention of the experimental community to the important role that the counterion of the precursor salt must play in the synthesis.     

The solvation of the mercury(II) ion-a 199Hg NMR study

The solvation of the mercury(II) ion in solvents with different solvation properties, water, dimethylsulfoxide, N,N-dimethylthioformamide, and liquid ammonia, has been studied by means of (199)Hg NMR. The (199)Hg chemical shift shows a pronounced dependence on the coordination number of the mercury(II) ion in the solvates resulting in a difference of over 1200 ppm between basically tetrahedral and octahedral complexes. The chemical shifts can furthermore be associated with electron-pair donor properties of the solvents. The spin-lattice relaxation times of the (199)Hg nucleus in the solvates have been measured at different applied magnetic fields, concentrations, temperatures, and isotope substitutions. Possible mechanisms for the (199)Hg relaxation were proposed and the chemical shielding anisotropy in the solvates has been estimated. The (199)Hg relaxation rates and the anisotropy are correlated with the structure of the solvate complexes in solution obtained from recent LAXS and EXAFS studies.     

Experimental evidence for a variable first coordination shell of the cadmium(II) ion in aqueous, dimethyl sulfoxide, and N,N'-dimethylpropyleneurea solution

A combined extended X-ray absorption fine structure (EXAFS) and large angle X-ray scattering (LAXS) investigation has been performed to evaluate the coordination structure of the cadmium(II) ion in aqueous, dimethyl sulfoxide, and N,N'-dimethylpropyleneurea (dmpu) solutions. This approach has singled out the existence of a flexible coordination shell around the cadmium(II) ion in aqueous and dimethyl sulfoxide solutions, whereas a regular octahedral complex is detected in dmpu. The EXAFS and LAXS techniques provide different values of the Cd-O first shell distance (2.27(1) A and 2.302(5) A, respectively) for the hydrated and dimethyl sulfoxide solvated complexes, and this discrepancy is originated by the simultaneous presence of hexa- and heptacoordinated complexes in solution, giving rise to a broad distribution of distances around the ion. These findings demonstrate that, in solution, the cadmium(II) ion forms quite flexible hydration and dimethyl sulfoxide solvate complexes undergoing a solvent exchange with unusually stable seven-coordinated intermediate complexes, and therefore the mean ion-solvent distance is longer in solution than in the solid state. In the dmpu solution, due to the bulkiness of the solvent molecules, the octahedral cadmium(II) solvate is extremely crowded and it is not possible for a seventh ligand to enter the inner-coordination shell. This investigation shows that the combined analysis of the EXAFS and LAXS data allows a reliable determination of the structural properties of electrolyte solutions, also in the presence of flexible coordination shell with a variable number of coordinating molecules.     

Thermochemistry of copper(II) ion solvation in aqueous organic solvents

The integral heat effects of CuCl₂ dissolution in aqueous DMSO, aqueous ethanol and aqueous acetone solutions at 298. 15 K in the electrolyte concentration range 0.001–0.01M were measured by means of calorimetry. ΔH _sol ⁰ values were obtained by extrapolation to zero electrolyte concentration. Literature data were used to determine the thermodynamic characteristics of Cu²⁺ transfer from water to aqueous organic solvents.     

Magnetic anisotropy in Ni(II)-Y(III) binuclear complexes: on the importance of both the first coordination sphere of the Ni(II) ion and the Y(III) ion belonging to the second coordination sphere

The synthesis of a new Ni(II)-Y(III) binuclear complex with a marked elongation axis in the first coordination sphere of the Ni(II) ion is presented. Its zero-field splitting (ZFS) is studied by means of magnetic data and state-of-the-art ab initio calculations. A good agreement between the experimental and theoretical ZFS parameter values is encountered, validating the whole approach. The magnetic anisotropy axes are extracted from the ab initio calculations, showing that the elongation axis around the Ni(II) ion corresponds to the hard axis of magnetization and that the sign of the axial D parameter is imposed by this axis. The Ni-Y axis is found to be an easy axis of magnetization, which is, however, not significant according to the sign of D. The already reported [(H(2)O)Ni(ovan)(2)(μ-NO(3))Y(ovan)(NO(3))]·H(2)O (ovan = o-vanillin) complex is then revisited. In this case, the elongation axis in the Ni(II) coordination sphere is less marked and the ZFS is dominated by the effect of the Y(III) ion belonging to the second coordination sphere. As a consequence, the D parameter is negative and the low-temperature behavior is dominated by the Ni-Y easy axis of magnetization. A competition between the first coordination sphere of the Ni(II) ion and the electrostatic effect of the Y(III) ion belonging to the second coordination sphere is then evidenced in both complexes, and the positive and negative D parameters are then linked to the relative importance of both effects in each complex.     

The coordination behaviour of ferrocene-based pyridylphosphine ligands towards Zn(II), Cd(II) and Hg(II)

The reaction of Group 12 metal dihalides MX(2) with the P,N-ligands [Fe(C(5)H(4)-PPh(2))(C(5)H(4)-2-py)] (1) (2-py = pyrid-2-yl), [Fe(C(5)H(4)-PPh(2))(C(5)H(4)-CH(2)-2-py)] (2) and [Fe(C(5)H(4)-PPh(2))(C(5)H(4)-3-py)] (3) (3-py = pyrid-3-yl) was investigated. For a 1 : 1 molar ratio of MX(2) and the respective ligand, three structure types were found in the solid state, viz. chelate, cyclic dimer and chain-like coordination polymer. The M(II) coordination environment is distorted pseudo-tetrahedral in each case. The P-M-N angle is much larger in the chelates (≥119°) than in the ligand-bridged structures (≤109°). 1 prefers the formation of chelates [MX(2)(1-κ(2)N,P)]. 3 forms coordination polymers [MX(2)(μ-3)](n). With the more flexible 2 all three structure types can occur. Dynamic coordination equilibria were observed in solution for the molecular complexes obtained with 1 and 2. NMR data indicate that the N- and P-donor sites interact most strongly with Zn(II) and Hg(II), respectively. While the formation of bis(phosphine)mercury complexes (soft-soft) was easily achieved, no bis(pyridine)zinc complex (borderline-borderline) could be obtained, which is surprising in view of the HSAB principle.     

The coordination chemistry of Zn(II), Cd(II) and Hg(II) complexes with 1,2,4-triazole derivatives

This perspective illustrates the coordination features of complexes constructed by 1,2,4-triazole derivatives and transition metal ions which belong to Group IIB, namely Zn(II), Cd(II) and Hg(II), demonstrates their behaviors in thermal stabilities, gas or liquid adsorption, fluorescence and nonlinear optical properties and also discusses the relation between their properties and crystal structures. Various 1,2,4-triazole derivatives containing versatile donor sites for coordination can be obtained through introducing different substituent groups to C3, N4 and C5 positions, thus offering rich coordination modes. The structures of these complexes rely on their triazole ligands, as well as mixed ligands, metal ions, anions and synthetic conditions. Obviously, the diversity in structure induces the controllability of properties, since the properties are influenced by several factors, which is significant for the applications of potential multifunctional materials.     

A multi-channel sensor based on 8-hydroxyquinoline ferrocenoate for probing Hg(II) ion

A new sensing molecule 8-hydroxyquinoline ferrocenoate (Fc-Q) which combines ferrocene and 8-hydroxyquinoline moieties was synthesized and applied as a multi-channel sensor for the detection of Hg²⁺ ion. Fc-Q can coordinate with Hg²⁺ to give colorimetric, fluorescent and electrochemical responses. Upon complexation with Hg²⁺ ion, the characteristic absorption peak is red-shifted (Δλ = 45 nm), the fluorescent intensity is quenched at 303 nm, and the oxidation peak is cathodic shifted (ΔE_1/2 = −149 mV). Quantitatively analyzed Hg²⁺ ions at the range of ppb level could be achieved by electrochemical response. For the practical application of sensing Hg²⁺ in real world water, Fc-Q modified screen-printed carbon electrodes were obtained for facile, sensitive, and on-site analysis of Hg²⁺.     

Fluorescent Au@Ag core-shell nanoparticles with controlled shell thickness and Hg(II) sensing

Au-Ag core-shell nanoparticles have been synthesized using synthetic fluorescent dipeptide β-Ala-Trp (β-Ala is β-alanine; Trp is l-tryptophan) in water at pH 6.94 and at room temperature. The synthesis of the Au-Ag core-shell nanomaterial does not involve any external reducing and stabilizing agents, and the constituents of dipeptide β-alanine and l-tryptophan are naturally occurring. Therefore, the synthesis procedure is ecofriendly. Moreover, the shell thickness has also been controlled, and the optical property of the core-shell nanomaterial varies with the shell thickness. The core-shell nanomaterial exhibits a fascinating fluorescence property. This fluorescent Au@Ag core-shell nanoparticle can detect toxic Hg(II) ions ultrasensitively (with a lower limit of detection of 9 nM) even in presence of Zn(II), Cd(II), and other bivalent metal ions (Ca(II), Mg(II), Ni(II), Mn(II), Ba(II), Sr(II), Pb(II), and Fe(II)). Au-Ag core-shell nanomaterials can also be reused for sensing Hg(II) ions.     

VIS spectroscopy studies of pseudooctahedral solvation complexes of cobalt(II) ion in mixed solvents

Solvation of cobalt(II) ion in mixed solvents (acetonitrile (AN)-dimethylsulfoxide (DMSO), AN-methanol (MeOH), AN---H₂O, MeOH---H₂O, DMSO---H₂O) has been studied by VIS absorption spectroscopy. A new application of the partial least-squares (PLS) method for the quantitative analysis of the spectral data has allowed to determine the number of solvation complexes and the solvent compositions of their maximum concentration in the solutions investigated. The results have been discussed in respect of the ability of the mixed solvents to solvate preferentially Co(II) ion.     

Fluorescence signaling systems for sensing Hg(II) ion derived from A2B-corroles

Selective detection of Hg(II) ions in solution by a series of novel free base bis-(nitrophenyl) corroles (1-4) with general formula A(2)B (where A = nitrophenyl, and B = N,N-dimethylaminophenyl, thienyl, naphthyl and tridecyloxyphenyl group) is described. Among the free base corroles, 4, with a tridecyloxy long chain moiety, has been found to exhibit the highest Hg(II) sensing ability. The detection is based on the fluorescence quenching of the corroles, arising from the combined effect of static (coordination) and dynamic (exciplex formation) factors.     

The pentacyanopyridine-4-aldoximeferrate(II) ion estimation of the ligand's coordination site

Summary Pyindine-4-aldoxime reacts with the aquopentacyanoferrate(II) ion by forming a complex compound of 1:1 molar ratio. ThepK _a value of the oxime group in the complex, the influence ofpH changes on its formation as well as IR data indicate the coordination of pyridine-4-aldoxime through the pyridine nitrogen.

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Das Pentacyanopyridin-4-aldoximferrat(II)-Ion. Bestimmung der Koordinationsstelle

Zusammenfassung Pyridin-4-aldoxim reagiert mit dem Aquopentacyanoferrat(II)-Ion und bildet einen Komplex mit dem Molarverhältnis 1:1. DerpK _a Wert der Oxim-Gruppe im Komplex, der Einfluß despH auf seine Bildung, wie auch die IR Daten weisen auf die Koordination des Pyridin-4-aldoxim über den Pyridin-Stickstoff hin.

     

Quantum chemical investigation of hyperfine coupling constants on first coordination sphere water molecule of gadolinium(III) aqua complexes

Hyperfine interactions (HFI) on the nuclei of the first coordination sphere water molecules in a model [Gd(H(2)O)(8)](3+) aqua complex and in the magnetic resonance imaging contrast agent [Gd(DOTA)(H(2)O)](-) were studied theoretically. Density functional theory (DFT) calculations combined with classical molecular dynamics (MD) simulations have been used in order to take into account dynamic effects in aqueous solution. DFT relativistic calculations show a strong spin-polarization of the first coordination sphere water molecules. This spin-polarization leads to a positive (17)O isotropic hyperfine coupling constant (A(iso)((17)O) = 0.58 +/- 0.11 MHz) and to a significant increase of the effective distance (r(eff)(Gd-O) = 2.72 +/- 0.06 A) of dipolar interaction compared to the mean internuclear distance (r(Gd-O) = 2.56 +/- 0.06 A) obtained from the MD trajectory of [Gd(DOTA)(H(2)O)](-) in aqueous solution. The point-dipole model for anisotropic hyperfine interaction overestimates therefore the longitudinal relaxation rate of the (17)O nucleus by approximately 45%. The (1)H isotropic hyperfine coupling constant of the bound water molecule is predicted to be very small (A(iso)((1)H) = 0.03 +/- 0.02 MHz), and the point-dipole approximation for first coordination sphere water protons holds. The calculated hyperfine parameters are in good agreement with available experimental data.     

Structural requirements for Hg(II) antidotes

A study involving (a) the structural chemistry of Hg(II) complexes with thiol containing ligands, (b) the stability constants for such systems and (c) the relative efficacy of 29 compounds as antidotes for mercury poisoning has been carried out to determine the structural requirements for Hg(II) antidotes. This leads to the suggestion that instances in which two thiol groups on the same chelate molecule are simultaneously bonded to the same Hg(II) species in a complex, water soluble or otherwise, are not found and Hg(II) species bearing two sulfur donors generally have a bond angle of 180° or so between these two bonds. It was hypothesized, from this, that chelating agents bearing a single sulfhydryl group might be almost as effective as mercury antidotes as those bearing two groups. Data on the stability constants and antidotal effectiveness are presented for such structures, but in general molecules which do not have the potential ability to chelate are also inferior as antidotes. From the data assembled it would appear that the presence of a second donor group is required. Because of the lability of the mercury-thiol bond, this second site seems necessary to provide the required kinetic stability for the complex. In the case of dithiols, the mercury may move back and forth from one sulfur donor site to another but may not (and possibily cannot) bind firmly and simultaneously to both donor sites.     

Structural and dynamical properties of the Hg2+ aqua ion: a molecular dynamics study

Molecular dynamics simulations of the Hg2+ ion in aqueous solution have been carried out using an effective two-body potential derived from quantum mechanical calculations. A stable heptacoordinated structure of the Hg2+ first hydration shell has been observed and confirmed by extended X-ray absorption fine structure (EXAFS) experimental data. The structural properties of the Hg2+ hydration shells have been investigated using radial and angular distribution functions, while the dynamical behavior has been discussed in terms of reorientational correlation functions, mean residence times of water molecules in the first and second hydration shells, and self-diffusion coefficients. The effect of water-water interactions on the Hg2+ hydration properties has been evaluated using the SPC/E and TIP5P water models.     

Cryptand derived fluorescence signaling systems for sensing Hg(II) ion: A comparative study

Two laterally non-symmetric aza-oxa cryptands have been derivatized with the electron-withdrawing fluorophore, 7-nitrobenz-2-oxa-1,3-diazole to obtain the corresponding mono-, bis- and tris-products. In each case, no appreciable emission is observed when the fluorophore is excited due to an efficient photoinduced intramolecular electron transfer (PET) from the lone pair on nitrogen present in the bridges. In the presence of a number of transition and heavy metal ions, their emission characteristics change. The electron-withdrawing ability of the fluorophore drastically alters the binding ability of the cryptand such that Hg(ii) affords largest enhancement of fluorescence. In contrast, mono-, bis- and tris-anthryl (electron-donating) derivatives of these cryptands do not exhibit any selectivity towards Hg(ii) and affords low fluorescence enhancement. Also, the difference in cavity dimension of the o-cryptand and m-cryptand plays a crucial role in terms of selectivity.