On the electron transfer through Geobacter sulfurreducens PilA protein

Geobacter sulfurreducens pili composed of the Type IV pili structural peptide PilA have been implicated as efficient electronic conductors. Though investigated experimentally, no detailed theoretical studies have been performed to date that provide quantitative estimation of the transmission spectrum, electron transfer (ET) paths, efficiency of current generation, and other factors needed for understanding possible mechanisms of conductivity. In the present work, we calculate from first principles the possibilities of electron tunneling through 3 PilA fragments which structure was identified recently by NMR. The results indicate that positively charged amino acids, arginines and lysines form electrostatic traps in the middle of the peptide preventing ET at low bias voltages (<～6 V). At higher biases the traps are filled with electrons making possible sequential electron tunneling through the central part of the protein. In addition, leucines and phenylalanines form ET loops facilitating electron stabilization within the protein and sequential ET. Our results indicate that ET through the PilA protein cannot occur by coherent ET, but suggest a sequential (incoherent) mechanism. © 2015 Wiley Periodicals, Inc. J. Polym. Sci., Part B: Polym. Phys. 2015 , 53, 1706–1717     

Electricity generation by Geobacter sulfurreducens attached to gold electrodes

The versatility of gold for electrode manufacture suggests that it could be an ideal material for some microbial fuel cell applications. However, previous studies have suggested that microorganisms that readily transfer electrons to graphite do not transfer electrons to gold. Investigations with Geobacter sulfurreducens demonstrated that it could grow on gold anodes producing current nearly as effectively as with graphite anodes. Current production was associated with the development of G. sulfurreducens biofilms up to 40 microm thick. No current was produced if pilA, the gene for the structural protein of the conductive pili of G. sulfurreducens, was deleted. The finding that gold is a suitable anode material for microbial fuel cells offers expanded possibilities for the construction of microbial fuel cells and the electrochemical analysis of microbe-electrode interactions.     

Oligonucleotide-modified electrodes for fast electron transfer to cytochrome c

Gold electrodes were modified with short ds-oligonucleotides via thiol binding to form a thin and stable surface layer. The modification was characterised by impedance measurements and used as a promoter for fast electron transfer to cytochrome c. The protein was investigated both immobilised and in solution showing reversible electrochemical behaviour in each case. The modification proved to have a good adsorption capability for the redox protein which was also found to be reversible. In the immobilised state at the electrode cytochrome c reacted with superoxide radicals in solution, exemplified by cyclic voltammetric measurements.     

Geobacter sulfurreducens can protect 304L stainless steel against pitting in conditions of low electron acceptor concentrations

The effect of Geobacter sulfurreducens cells was studied on the electrochemical behaviour of 304L stainless steel, emphasizing the role of the soluble electron acceptor (fumarate). In fumarate-lacking media, the presence of G. sulfurreducens induced free potential ennoblement in a few hours. This ennoblement has already been observed in standard media that contained fumarate. Our previous studies have shown that G. sulfurreducens shifted the pitting potential toward the positive values. The pits induced by the presence of the bacteria were wider and deeper than in the absence of bacteria. Here, in fumarate-lacking media, similar shift in pitting potential was observed, but the repassivation phase was strongly improved. AFM analysis showed that pits were identical with those observed in the absence of bacteria at lower potential. In contrast with all the previous work where G. sulfurreducens enhanced corrosion, here at a low concentration of electron acceptor, the presence of the bacteria protected the steel against pitting.     

Direct electron transfer reactions of laccases from different origins on carbon electrodes

Electrochemical studies of laccases from basidiomycetes, i.e., Trametes hirsuta, Trametes ochracea, Coriolopsis fulvocinerea, Cerrena maxima, and Cerrena unicolor, have been performed. Direct (mediatorless) electrochemistry of laccases on graphite electrodes has been investigated with cyclic voltammetry, square wave voltammetry as well as potentiometry. For all mentioned high potential laccases direct electron transfer (DET) has been registered at spectrographic graphite and highly ordered pyrolytic graphite electrodes. The characteristics of DET reactions of the enzymes were analysed under aerobic and anaerobic conditions. It is shown that the T1 site of the laccase is the primary electron acceptor, both in solution (homogenous case) and at surface of the graphite electrode (heterogeneous case). A mechanism of ET for the process of the electro-reduction of oxygen at the laccase-modified graphite electrodes is proposed and the similarity of this heterogeneous process to the laccase catalysed oxygen reduction homogeneous reaction is concluded.     

Direct electron transfer reactions between human ceruloplasmin and electrodes

In an effort to find conditions favouring bioelectrocatalytic reduction of oxygen by surface-immobilised human ceruloplasmin (Cp), direct electron transfer (DET) reactions between Cp and an extended range of surfaces were considered. Exploiting advances in surface nanotechnology, bare and carbon-nanotube-modified spectrographic graphite electrodes as well as bare, thiol- and gold-nanoparticle-modified gold electrodes were considered, and ellipsometry provided clues as to the amount and form of adsorbed Cp. DET was studied under different conditions by cyclic voltammetry and chronoamperometry. Two Faradaic processes with midpoint potentials of about 400 mV and 700 mV vs. NHE, corresponding to the redox transformation of copper sites of Cp, were clearly observed. In spite of the significant amount of Cp adsorbed on the electrode surfaces, as well as the quite fast DET reactions between the redox enzyme and electrodes, bioelectrocatalytic reduction of oxygen by immobilised Cp was never registered. The bioelectrocatalytic inertness of this complex multi-functional redox enzyme interacting with a variety of surfaces might be associated with a very complex mechanism of intramolecular electron transfer involving a kinetic trapping behaviour.     

New degenerate metal-oxide electrodes for nearly reversible direct electron transfer to the redox proteins

Heavily doped cadmium tin oxide (CTO) film electrodes were developed for fast electron exchange with redox proteins. The metal oxide films showed nearly reversible electron transfer for the [2Fe–2S] proteins spinach ferredoxin (Sp fd) and putidaredoxin (Pdx), and the well-studied heme protein horse heart cytochrome c. These represent a family of proteins that are of comparable size, but vary significantly in overall charge, formal redox potential, and type of metal center. The unmediated electron exchange was achieved through variation of metal oxide film synthesis parameters that led to an increase of the charge carrier concentration up to the levels typical for degenerate semiconductors. In addition, the flat band potential of the films was shifted close to or more positive of the formal redox potentials of proteins such that the semiconductor electrodes would be utilized in an accumulation mode. The rates and sustainability of electron transfer for the two ferredoxins obtained on these cadmium tin oxide electrodes are as high or higher than previously reported.     

Dynamics of adiabatic electron transfer reactions at metal electrodes

We have investigated the dynamics of adiabatic electron transfer reactions at metal electrodes using a Hamiltonian suggested by Schmickler (J. Electroanal. Chem., 204 (1986) 31). We show that in the adiabatic limit the problem reduces to that of dynamics of a single variable, the shift of the ionic orbital caused by its interaction with the solvent. This variable is identified as the reaction co-ordinate for the problem and we show that in certain limits, it obeys a non-linear Volterra type integral equation, with a stochastic inhomogeneous term. For an inhomogenous term with the autocorrelation function decaying exponentially, this may be converted into a differential equation for Brownian motion. This equation can be analysed to obtain the rate, through the associated Fokker-Planck equation. The rate so obtained, has a correction to the pre-exponential factor obtained by Schmickler. A possible extension to inner sphere reactions is also discussed.     

Direct electron transfer reaction of glucose oxidase at bare silver electrodes and its application in analysis

The direct electron transfer reaction of glucose oxidase (GOx) at a bare silver electrode is verified. The electron transfer number n = 2, electron transfer coefficient α = 0.45 and rate constant of the electrochemical reaction K_s = 0.1 s⁻¹ are obtained. This communication presents a multimolecular adsorption model to explain the properties of the direct electron reaction between GOx and bare silver electrodes. The residual valence force may be an important factor to ensure a direct electron transfer reaction on the bare electrode. On the basis of the experimental fact that only biologically active GOx exhibits electrochemical activity in solution, a facile analytical method for analyzing the active GOx concentration is developed. The results determined correspond very well to that of a spectrometric method.     

Unmediated by DNA electron transfer in redox-labeled DNA duplexes end-tethered to gold electrodes

Electron transfer (ET) between gold electrodes and redox-labeled DNA duplexes, immobilized onto the electrodes through the alkanethiol linker at the 3'-end and having internal either methylene blue (MB) or anthraquinone (AQ) redox labels, was shown to depend on the redox label charge and the way the redox label is linked to DNA. For loosely packed DNA monolayers, the conjugation of the positively charged MB to DNA through the long and flexible alkane linker provided ET whose kinetics was formally governed by the diffusion of the redox label to the negatively charged electrode surface. For the uncharged AQ label no ET signal was detected. The conjugation of AQ to DNA through the short and more conductive acetylene linker did not provide the anticipated DNA-mediated ET to the AQ-moiety: ET appeared to be low-efficient if any in the studied system, for which no intercalation of AQ within the DNA duplex occurred. The ET communication between the electrode and AQ, built in DNA through the acetylene linker, was achieved only when Ru(NH(3))(6)(3+) molecules were electrostatically attached to the DNA duplex, thus forming the electronic wire. These results are of particular importance both for the fundamental understanding of the interfacial behavior of the redox labeled DNA on electrodes and for the design of biosensors exploiting a variation of ET properties of DNA in the course of hybridization.     

Isolation and purification of PQQ-dependent lactate dehydrogenase from Gluconobacter and use for direct electron transfer at carbon and gold electrodes

This research details the isolation and purification of a new type of lactate dehydrogenase that is dependent upon the coenzyme pyrroloquinoline quinone (PQQ). PQQ-dependent enzymes have been of interest in the literature over the last decade due to the fact that many of them can undergo direct electron transfer (DET) at electrode surfaces which is of interest for biosensor and biofuel cell applications. In the paper, we detail the isolation of PQQ-dependent lactate dehydrogenase (PQQ-LDH) from two sources of Gluconobacter (Gluconobacter sp. 33 and Gluconobacter suboxydans). This paper also shows the first evidence that PQQ-LDH can undergo direct electron transfer at gold and carbon electrode surfaces for future use in biosensors and biofuel cells.     

Enzymatic mechanisms and electron transfer mediation in chronoamperometric biosensors

Electron transfer mediation to an anode, whose potential is judiciously controlled, provides the conceptual basis for the development of novel chronoamperometric biosensors. The mediators are appropriately selected redox couples (Ox/Red) which are amenable to recycling in the following type of enzyme E catalyzed reaction sequence

Direct electron transfer between heme-containing enzymes and electrodes as basis for third generation biosensors

Direct electron transfer (DET) between redox enzymes and electrodes found the basis for third generation biosensors. Recent investigations in the authors’ laboratories on the bioelectrochemistry of heme-containing proteins and enzymes, primarily peroxidases, but also cellobiose dehydrogenase, will be reviewed.     

Photoinduced electron transfer from DABCO to trans-nitrostilbenes

The anion radical of the trans isomers of 4-nitro-, 4,4'-dinitro-, and 4-nitro-4'-methoxystilbene was generated by triplet quenching with 1,4-diazabicyclo[2.2.2]octane (DABCO) in polar solvents at room temperature using laser flash photolysis. Electron transfer and trans → cis photoisomerization are competing processes. The radical ions decay by electron back-transfer yielding the initial ground states.     

The determination of electron transfer rates for several quinonoid compounds at platinum and gold electrodes

Rapid scan cyclic voltammetric methods were used to determine the standard heterogeneous rate constants of single electron transfer reactions involving several quinonoid molecules at platinum and gold electrodes. Measurements were made in acetonitrile, dimethylformamide, dimethylsulphoxide and propylene carbonate solutions. Corresponding activation energies were evaluated on the basis of theoretical treatments of Marcus and of Levich, Dogonadze and Chizmadzhev and were compared with theoretically calculated values. Discrepancies between theory and experiment are discussed qualitatively in terms of reactant and solvent structures.     

Determination of heterogeneous electron transfer rate constants at microfabricated iridium electrodes

There has been an increasing use of both solid metal and microfabricated iridium electrodes as substrates for various types of electroanalysis. However, investigations to determine heterogeneous electron transfer rate constants on iridium, especially at an electron beam evaporated or dc magnetron sputtered surface, have not previously been performed. This paper compares the results of these microfabricated surfaces using ultramicroelectrode arrays and steady-state currents. Even though the dc magnetron sputtered iridium surface demonstrated a slightly more reversible electrochemical behavior than the electron beam evaporated surface, overall the microfabricated microelectrodes and ring electrode indicated similar reversibility to the polished metallic iridium disk electrode.     

Direct electron transfer of PQQ-glucose dehydrogenase at modified carbon nanotubes electrodes

In order to establish efficient enzyme-electrode-contacts for the pyrroloquinoline quinone dependent glucose dehydrogenase (PQQ-GDH) different immobilisation strategies are investigated. Multi-walled carbon nanotubes (MWCNT) on gold electrodes are modified by chemical treatment and by (poly)-aniline derivatives. The electropolymerisation of methoxy-m-anilinesulfonic acid and m-aminobenzoic acid on the MWCNTs allows the covalent coupling of the PQQ-GDH. Such a poly-[ASA-ABA]/MWCNT/Au electrode can achieve current densities of up to 500 μA/cm² at a potential of 100 mV vs. Ag/AgCl. Furthermore investigations with small amounts of free PQQ indicate direct electron transfer between enzyme and electrode.     

Local electron transfer rate measurements on modified and unmodified glassy carbon electrodes

A natural and artificial distribution of electron transfer activity on glassy carbon electrodes can be observed and quantified by the use of scanning electrochemical microscopy (SECM). A large (sevenfold) spread in rate constant is found for randomly sampled sites on polished, untreated glassy carbon surfaces. Direct-mode oxidation with the SECM tip was used to produce small regions of oxidized carbon on a polished surface. A large increase in electron transfer rate for the Fe(II/III) ion is observed on the locally oxidized carbon surface in comparison to the unoxidized region. Rate constant measurements made along a line profiles the transition from unoxidized to oxidized surfaces. SECM images of defect sites show reaction–rate variations. Rate constants measured at several locations of the defective surface allows discrimination between the kinetic and topographic components of the SECM image. Dedicated to the 80th birthday of Keith B. Oldham