Crown compounds for anions. The nature of chemical bonds in the complexes of halide anions with cyclic trimeric perfluoro-o-phenylenemercury and some of its analogs

Geometries and electronic structures of the complexes of halide anions with cyclic trimerico-phenylenemercury, (o-C₆H₄Hg)₃, perfluoro-o-phenylenemercury, (o-C₆F₄Hg)₃, vinylenemercury, (C₂H₂Hg)₃, and perfluorovinylenemercury, (C₂F₂Hg)₃, were modelled by the MNDO method. Calculations were performed for [L-X]^– semisandwich complexes, [X-L-X]^2– bipyramidal complexes, and [L-X-L]^– sandwich complexes (where X=Hal,L is a mercury-containing macrocycle). Based on the results of calculations, we concluded that it was advantageous to describe the chemical bonding between halide anions and mercury-containing macrocycles in terms of generalized chemical bonds, which were successfully used for -complexes of transition metals. In the [L-X]^– semisandwich complexes, the halide anion and the metallacycle are involved in the formation of three generalized chemical bonds: one headlight-shaped -bond and two two-lobe -bonds. In the [X-L-X]^2– bipyramidal complexes, each halide anion forms three generalized chemical bonds with the macrocycle. It is possible because the macrocycleL has unoccupied molecular orbitals suitable for the formation of such bonds; these MOs consist mainly of the orbitals of mercury atoms directed toward both the upper and lower halogen atoms. In the [L-X-L]^– sandwich complexes, the halide anion cannot be bonded to each ringvia three bonds, and, hence, an unsymmetrical structure is formed, in which the rings are located at different distances from the central atom: the [L-X]^– semisandwich complex solvated by macrocycleL.Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 6, pp. 1035–1042, June, 1995.The authors are grateful to V. I. Faustov for valuable remarks.This work was supported by the Russian Foundation for Basic Research (Project No. 93-03-18342).     

Crown compounds for anions. MNDO calculations of complexes of halide anions with cyclic pentameric difluoromethylidenemercury

Molecular and electronic structures of complexes of halide anions with cyclic pentameric difluoromethylidenemercury [CF₂Hg]₅ have been studied by the MNDO method. Calculations have been performed for [L-X]^– halfsandwich complexes and bipyramidal complexes [X-L-X]^2– having a shape of a spinning top (L is the mercury-containing macrocycle; X = F, Cl, Br, or 1). It has been shown that in complexes of both types, halide anions are bonded to the mercury-containing macrocycle via three generalized chemical bonds: one headlightshaped -bond and two two-lobe n-bonds. The complexes studied have been compared with the analogous complexes of the macrocycles containing three mercury atoms. The similarity and differences in the character of the generalized chemical bonds in relation to the size of the cycle have been considered.V. B. Shur, I. A. Tikhonova, F. M. Dolgushin, A. I. Yanovsky, Yu. T. Struchkov, A. Yu. Volkonsky, and E. V. Solodova, Unpublished results.Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 1, pp. 44–48, January, 1996.     

Binuclear and polynuclear transition metal complexes with macrocyclic ligands. 5. Novel complexes of asymmetric polydentate macrocyclic Schiff bases. Step-by-step synthesis

Reactions of 2,6-bis(3-aminopropylaminocarbonyl)pyridine (1) with 4-tert-butyl-2,6-diformylphenol and 2,5-diformylpyrrole in the presence of Ba(ClO₄)₂ in EtOH afford barium complexes with asymmetric macrocyclic Schiff bases as soft and hard ligands. The reaction of compound 1 with Cu(OCOCMe₃)₂ involves closure of a tetrahydropyrimidine ring to give a mononuclear complex, which was structurally characterized by X-ray diffraction analysis.     

Coordination chemistry of anticrowns: Complexation of cyclic trimeric perfluoro-o-phenylenemercury with nitro compounds

Cyclic trimeric perfluoro-o-phenylenemercury (o-C₆F₄Hg)₃ (1) is capable of reacting with nitromethane to give complex {[(o-C₆F₄Hg)₃](CH₃NO₂)} (2) containing one molecule of the nitro compound per one macrocycle molecule. In this complex, the nitromethane ligand is bound to 1 by its both oxygen atoms, one of which is simultaneously coordinated to all three Hg centres of the macrocycle while the other interacts with a single Hg centre. The complex of similar composition, {[(o-C₆F₄Hg)₃](C₆H₅NO₂)} (3), is produced in the interaction of 1 with nitrobenzene. In this complex too, the both oxygen atoms of the nitro group are involved in the bonding to the macrocycle. A distinctive feature of 3 is that here one oxygen atom of the coordinated nitro derivative is bound by only two Hg centres of 1 whereas the other interacts again with a single Hg site. The reaction of 1 with 5-nitroacenaphthene affords a 1:1 complex, {[(o-C₆F₄Hg)₃](C₁₂H₉NO₂)} (4), having a polydecker sandwich structure in the crystal. Unlike in 3, the aromatic rings of the nitroarene units in 4 are disposed virtually in parallel to the macrocycles. The nitro compound in 4 behaves again as a bidentate ligand, forming three Hg-O bonds with one of the adjacent macrocycles and a single Hg-O bond with another molecule of 1. The complex is characterized also by shortened Hg-C contacts between the Hg centres of 1 and the carbon atoms of the nitroarene moiety as well as shortened C-C contacts between the carbon atoms of the nitroarene and the macrocycle. In the interaction of 1 with 1-nitropyrene, complexes of two compositions, viz. {[(o-C₆F₄Hg)₃](C₁₆H₉NO₂)} (5) and {[(o-C₆F₄Hg)₃](C₁₆H₉NO₂)₃} (6) are formed. An X-ray diffraction study of 6 has shown that in this adduct two of three coordinated molecules of the nitro compound are located on one side of the metallacycle plane while the third nitroarene molecule is disposed on its other side. The aromatic rings of all three nitropyrene ligands in 6 are practically parallel to the mean plane of the macrocycle. In contrast to 2-4, each molecule of the nitroarene in 6 is bonded to 1 by a single oxygen atom which is coordinated only to one Hg centre. In the case of one of the nitropyrene ligands that forms much longer Hg-O bond with 1 than two others, an additional contribution to the bonding is made by shortened Hg-C contacts between the macrocycle and the carbon atoms of the aromatic pyrene core and also by shortened C-C contacts between the carbon atoms of the coordinated nitroarene and 1. The synthesized adducts are the first examples of complexes of an anticrown with nitro compounds.     

Synthesis and structures of boron complexes of acyl hydroxy coumarins

New boron chelates were synthesized by the reactions of 3-acetyl-4-hydroxycoumarin and 8-acyl-7-hydroxy-4-methylcoumarins with boron trifluoride etherate and hydroxybenzodioxaborole. The structure of 3-acetyl-4-difluoroboryloxycoumarin containing an intramolecular C=O...B coordination bond was established by X-ray diffraction. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 11, pp. 2012–2015, November, 2006.     

Syntheses and crystal structures of SmIII and ThIV complexes with macrocyclic cavitand cucurbituril

Slow evaporation of solutions of samarium nitrate and thorium chloride in hydrochloric acid containing the macrocyclic cavitand cucurbituril (C₃₆H₃₆N₂₄O₁₂) afforded crystals of the [{Sm(H₂O)₅(NO₃)}₂(C₃₆H₃₆N₂₄O₁₂)](NO₃)₄·6.5H₂O and [{Th(H₂O)₅Cl}₂(C₃₆H₃₆N₂₄O₁₂)]Cl₆·13H₂O complexes, respectively. The [Sm(C₃₆H₃₆N₂₄O₁₂)(H₂O)₅(SO₄)][Sm(H₂O)₅(SO₄)₂]·17H₂O complex was generated upon heating (130 °C) of a mixture of samarium sulfate, cucurbituril, and water in a sealed tube. X-ray diffraction analysis demonstrated that the metal atoms in these complexes are bound to the portal oxygen atoms of the cucurbituril molecules. In addition, the portal oxygen atoms of cucurbituril are linked to the coordinated H₂O molecules via hydrogen bonds.     

Crown compounds for anions. Sandwich complexes of cyclic trimeric perfluoro-o-phenylenemercury with hexacyanoferrate(III) and nitroprusside anions

Cyclic trimeric perfluoro-o-phenylenemercury (o-C₆F₄Hg)₃ (1) is able to bind hexacyanoferrate(III) and nitroprusside anions to form complexes {[(o-C₆F₄Hg)₃]₂[Fe(CN)₆]}³⁻ and {[(o-C₆F₄Hg)₃]₂[Fe(CN)₅NO]}²⁻, respectively, which contain one anionic species per two macrocycles. According to X-ray diffraction data, the complexes have unusual sandwich structures wherein the anionic guest is located between the planes of two molecules of 1 and is coordinated to each of these through two types of Fe-C-N-Hg bridges. One type is the simultaneous coordination of a cyanide ligand to all three Hg centres of the cycle. The other type is the coordination of a cyanide group to a single Hg atom of the macrocycle. In both types, the bonding of the anionic guest with the macrocyclic host is accomplished with the participation of π-electrons of the cyanide ligands. The synthesized compounds are the first examples of host-guest complexes of a macrocyclic multidentate Lewis acid with anionic metal complexes.     

Transition metal complexes with heterocyclic analogs of fluorene. 1. Synthesis, structures, and haptotropic rearrangements of tricarbonylchromium complexes of dibenzothiophene

The complex formation of dibenzothiophene with chromium carbonyl complexes of the general formula L₃Cr(CO)₃ (L = Py, NH₃, or CO) afforded ⁶-C₁₂H₈SCr(CO)₃ (1). In the presence of tetramethylethylenediamine, complex 1 was selectively metallated with BuLi at position 4 of the coordinated ring to form ⁶-4-LiC₁₂H₈SCr(CO)₃ (2). In decane, the tricarbonylchromium group is reversibly and intramolecularly migrates from the unsubstituted to substituted ring due to the inter-ring haptotropic rearrangement (IRHR) at 130 °C for 100 h. In decane, the rate constant of IRHR was estimated experimentally by ¹H NMR spectroscopy and theoretically by the density functional theory (DFT).     

Dinuclear and polynuclear transition metal complexes with macrocyclic ligands. 6. New dinuclear copper(ii) complexes with macrocyclic Schiff bases derived from 4-tert-butyl-2,6-diformylphenol

New dinuclear complexes containing Cu^II atoms in the cavity of a macrocyclic Schiff base were prepared by template condensation of 4-tert-butyl-2,6-diformylphenol with 1,3-diaminopropane in the presence of Cu^II trimethylacetate and chloride as well as by extra-ligand exchange. The mononuclear Cu^II complex with two 1,3-diaminopropane molecules can serve as an intermediate in this template synthesis. The reaction of Cu^II trimethylacetate with the unsymmetrical macrocyclic Schiff base synthesized earlier afforded a new dinuclear copper(ii) complex with the amine and imine nitrogen atoms in the coordination sphere. The structures of the new complexes were established by X-ray diffraction analysis and studied by the density functional theory (gradient-corrected PBE functional, TZ2p basis set).     

Syntheses and crystal structures of supramolecular compounds of tetranuclear ZrIV and HfIV aqua hydroxo complexes with macrocyclic cavitand cucurbituril

Slow evaporation of hydrochloric acid solutions of zirconium(iv) or hafnium(iv) oxochlorides and cucurbituril in air afforded compounds with composition [M₄(OH)₈(H₂O)₁₆]Cl₈·(C₃₆H₃₆N₂₄O₁₂)·16H₂O, where M = Zr (1) or Hf (2). According to the X-ray diffraction data, complexes 1 and 2 are isostructural. Their crystal structures can be described as packings of polymer chains consisting of alternating cucurbituril molecules and tetranuclear cations [M₄(OH)₈(H₂O)₁₆]⁸⁺ linked to each other via an extensive network of hydrogen bonds. Compound 2 is the first structurally characterized tetranuclear hafnium aqua complex.     

Synthesis, structures, and magnetic properties of binuclear carboxylate complexes with NiII and NiIII atoms

The reaction of NiCl₂·6H₂O with Me₃CCOOH and KOH taken in a molar ratio of 1:2:2 in water afforded the nonanuclear antiferromagnetic complex Py₂Ni₂(Me₃CCOOH)₂(OOCCMe₃)₂(μ-OOCCMe₃)₂(μ-OH₂), which apparently contains Ni^II and Ni^III atoms. The complex was isolated by extraction with CH₂Cl₂, benzene, or hexane. The reactions of this complex with pyridine bases (pyridine (Py), 3,4-lutidine (Lut), and nicorandil (Nic)) gave the adducts L₄Ni₂(OOCCMe₃)₂(μ-OOCCMe₃)₂(μ-OH) (L=Py, Lut, or Nic, respectively). According to magnetic measurements, intramolecular ferromagnetic exchange interactions in these adducts are complemented by intermolecular antiferromagnetic interactions. Pyrolysis of the pyridine adduct in air or under an inert atmosphere in xylene yielded the antiferromagnetic complex Py₂Ni₂(Me₃CCOOH)₂(OOCCMe₃)₂(μ-OOCCMe₃)₂(μ-OH₂), which contains Ni^II atoms. The structures of all the complexes synthesized were established by X-ray diffraction analysis. The electronic absorption spectra of these compounds are considered. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 4, pp. 725–738, April, 1998.     

Synthesis,characterizations and crystal structures of new antimony (III) complexes with dithiocarbamate ligands

Eight new antimony (III) complexes containing dithiocarbamate ligands (R₂NCS₂)₂SbBr [R₂NCS₂ = OC₄H₈NCS₂ (1), C₂H₅NC₄H₈NCS₂ (2), Me₂NCS₂ (3), C₄H₈NCS₂ (4)] and (R₂NCS₂)₃Sb[R₂NCS₂ = C₅H₁₀NCS₂ (5), Bz₂NCS₂ (6), Et₂NCS₂ (7), (HOCH₂CH₂)₂NCS₂ (8)] have been synthesized by the reactions of antimony (III) halides with dithiocarbamate ligands in 1:2 or 1:3 stoichiometries. All the complexes have been characterized by elemental analysis, melting point as well as spectral [IR and NMR (¹H and ¹³C)] studies. The crystal structures of complexes 1, 5 and 8 have been determined by X-ray single crystal diffraction, and their electrochemical character has also been studied.     

Palladium complexes of multidentate pyrazolylmethyl pyridine ligands: Synthesis,structures and phenylacetylene polymerization

The compounds, 2,6-bis(3,5-dimethylpyrazol-1-ylmethyl)pyridine (_MeNˆNˆN) (L1) and 2,6-bis(3,5-ditertbutylpyrazol-1-ylmethyl)pyridine (_tBuNˆNˆN) (L2), react with either [Pd(NCMe)₂Cl₂] or [Pd(COD)ClMe] to form the mononuclear palladium complexes [Pd(_MeNˆNˆN)Cl₂] (1), [Pd(_MeNˆNˆN)ClMe] (2), [Pd(_tBuNˆNˆN)Cl₂] (3) and [Pd(_tBuNˆNˆN)ClMe] (4). Reactions of 1, 2 and 4 with the halide abstractor, NaBAr₄ (Ar = 3,5-(CF₃)₂C₆H₃), led to the formation of stable tridentate cationic species [Pd(_MeNˆNˆN)Cl]⁺(5), [Pd(_MeNˆNˆN)Me]⁺ (6) and [Pd(_tBuNˆNˆN)Cl]⁺ (7) respectively. The analogous carbonyl linker cationic species [Pd{(3,5-Me₂pz-CO)₂-py}Cl]⁺ (9) and [Pd{(3,5-^tBu₂pz-CO)₂-py}Cl]⁺ (10), prepared by halide abstraction of the neutral complexes [Pd{(3,5-Me₂pz-CO)₂-py}Cl₂] and [Pd{(3,5-^tBu₂pz-CO)₂-py}Cl₂] by NaBAr₄, were however less stable with t_1/2 of 14 and 2 days respectively. Attempts to crystallize 1 and 3 from the mother liquor resulted in the isolation of the salts [Pd(_MeNˆNˆN)Cl]₂[Pd₂Cl₆] (11) and [Pd(_tBuNˆNˆN)Cl]₂[Pd₂Cl₆] (12). Although when complexes 1–4 were reacted with modified methylaluminoxane (MMAO) or NaBAr₄, no active catalysts for ethylene oligomerization or polymerization were formed, activation with silver triflate (AgOTf) produced active catalysts that oligomerized and polymerized phenylacetylene to a mixture of cis-transoidal and trans-cisoidal polyphenylacetylene.     

Synthesis and crystal structures of PrIII and NdIII complexes with the macrocyclic cavitand cucurbit[6]uril

The [{Pr(NO₃)₂(H₂O)₃}{Pr(NO₃)(H₂O)₄} (C₃₆H₃₆N₂₄O₁₂)](NO₃)₃·4H₂O and [{Nd(NO₃)(H₂O)₄} ₂(NO₃@C₃₆H₃₆N₂₄O₁₂)][Nd(NO₃)₆] complexes were prepared by heating a mixture of lanthanide nitrates, cucurbit[6]uril, and water in a sealed tube. X-ray diffraction study demonstrated that the metal atoms in the former complex are linked to the macrocycle through tridentate coordination of the portal oxygen atoms of cucurbit[6]uril to the praseodymium(III) cation. The neodymium(III) complex is the first example of lanthanide compounds with cucurbit[6]uril belonging to coordination polymers. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 9, pp. 1511–1517, September, 2006.     

Synthesis, characterization and crystal structures of di-three-coordinated copper(I) macrocyclic Schiff base complexes

The air-stable di-copper(I) complexes Cu₂L(SCN)₂ (1) and Cu₂L(SCN)_1.86I_0.14 (2) of the N₄ macrocyclic Schiff base ligand L have been synthesized and characterized by IR, elemental analysis, UV-Vis and crystal structure determination. X-ray analysis of the complexes shows an approximate distorted trigonal planar geometry around each copper(I) ion that is constructed from one N-bonded thiocyanate (or iodide in 2) group and two imine nitrogen atoms. DFT calculations were used to determine the structural features of the Cu₂L(SCN)₂ complex, and these were consistent with the experimental data for the complex.     

Coordination chemistry of mercury-containing anticrowns. Synthesis and structures of the complexes of cyclic trimeric perfluoro-o-phenylenemercury with ethanol, THF and bis-2,2′-tetrahydrofuryl peroxide

Cyclic trimeric perfluoro-o-phenylenemercury (o-C₆F₄Hg)₃ (1) is capable of reacting with ethanol to form a 1:1 complex, {[(o-C₆F₄Hg)₃](EtOH)} (2), having a pyramidal structure. The ethanol molecule in 2 is coordinated through the oxygen atom to all Hg atoms of the macrocycle. The interaction of 1 with THF followed by drying of the product obtained in vacuum also gives the corresponding pyramidal 1:1 complex {[(o-C₆F₄Hg)₃](THF)} (3). However, when a THF solution of 1 is slowly concentrated to a small volume and the resulting crystals are not dried, three cocrystallized adducts, viz., {[(o-C₆F₄Hg)₃](THF)₂} (4), {[(o-C₆F₄Hg)₃](THF)₃} (5) and {[(o-C₆F₄Hg)₃](THF)₄} (6), containing two, three and even four THF molecules, respectively, are produced. Complex 4 has a bipyramidal structure. Complexes 5 and 6 are also characterized by the presence of a bipyramidal fragment formed by two coordinated THF species. The topological analysis of the DFT-calculated function of the electron density distribution in the crystals of 2 and 3 revealed the critical points (3, −1) on each of the three Hg···O lines, which is in accord with the X-ray diffraction data indicating on the presence of the triply coordinated Lewis base molecule in both adducts. If a THF solution of 1 is held for a month at 20 °C on air under stirring, a sandwich complex of 1 with previously unknown bis-2,2′-tetrahydrofuryl peroxide (THFPO) is formed. The THFPO ligand in this sandwich, {[(o-C₆F₄Hg)₃]₂(THFPO)} (7), provides all its four oxygen atoms for the bonding to the molecules of 1. Two of these oxygen atoms, belonging to the tetrahydrofuryl moieties, are cooperatively bound each by three Hg atoms of the neighbouring macrocyclic unit whereas two others, belonging to the peroxide group, coordinate to a single Hg atom of the adjacent macrocycle.     

Synthesis, characterizations and crystal structures of new organoantimony(V) complexes with various isomers of fluoromethylbenzoate ligands

Six new organoantimony(V) complexes containing various isomers of fluoromethylbenzoate ligands [RC₆H₃COO]₂SbPh₃ and [RC₆H₃COO]SbPh₄ [R = 3-F-4-(CH₃) (1, 4), 4-F-2-(CH₃) (2, 5), 5-F-2-(CH₃) (3, 6)] have been synthesized by the reactions of triphenylantimony(V) dichloride or tetraphenylantimony(V) bromide with various isomers of fluoromethylbenzoate ligands in 1:2 or 1:1 stoichiometries. All the complexes have been characterized by elemental analysis, IR and NMR [¹H, ¹³C and ¹⁹F] studies. The crystal structures of complexes 1, 3, 4, 5 and 6 have been determined by X-ray single crystal diffraction. The structure of complexes show that the five-coordinated antimony(V) atom adopts a distorted trigonal bipyramidal geometry. Furthermore, weak but significant intermolecular C–H···O, C–H···F hydrogen bonds, C–H···pi stacking lead to aggregation and assembly of these complexes into 1D and 2D supramolecular frameworks.     

Tetranuclear rhenium chalcogenide cluster complexes with a cubane core. Synthesis,structures, and properties

The results of studies of rhenium chalcogenide cluster complexes with the [Re₄Q₄] cubane core, where Q = S, Se, or Te, are reviewed. Different approaches to the synthesis of these compounds are surveyed and their properties and structures are considered. Substitution reactions in the cluster core and replacements of terminal ligands are discussed. The formation of polymers consisting of the tetranuclear rhenium chalcogenide cyanide clusters as structural building blocks is considered.     

Synthesis,characterization and crystal structures of dinuclear macrocyclic Schiff base copper(I) complexes bearing different bridges

Utilizing a new 20-membered macrocyclic Schiff base ligand with two coordination sites formed from the [2+2] condensation of 1,3-diaminopropane and benzene-1,3-dicarboxaldehyde in the presence of CuX (X = Cl⁻, Br⁻, I⁻) salts, air-stable dicopper(I) complexes were synthesized in acetonitrile, intramolecularly linked via two halide groups, and characterized by different physico-chemical techniques. The single crystal X-ray diffraction technique indicates these complexes consist of two N₂X₂ donor sets that have distorted tetrahedral coordination environments around the copper(I) ions. In these halogen-bridged binuclear Cu₂LX₂ systems the Cu?Cu separation can be controlled, as this distance is reduced on increasing the halide size and hence the X?X repulsion, with the rigidity of the macrocycle playing a significant role.     

Thio-azo proligands based on 5,6-derivatives-1,10-phenanthroline and their use for iron(II) complexes: Synthesis,characterization and crystal structures

The preparation and characterization of 5,6-substituted-1,10-phenanthrolines, phdtos = 5,6-bistosyl-1,10-phenanthroline (1) and phdbt = 5,6-dibenzyltiol-1,10-phenanthroline (2) are described. The synthesis of (1) was achieved in good yield via the corresponding dihydroxide and 2 was obtained by cross-coupling reaction of 5,6-dibromo-1,10-phenanthroline and benzylthiol mediated by a palladium catalytic system in refluxing toluene (120 °C). These phenanthroline derivatives were used as ligands to afford [Fe^II(phdtos)₃](PF₆)₂ (5) and [Fe^II(phdbt)₃](PF₆)₂ (6) complexes.