Nitric oxide reduction forming hyponitrite triggered by metal-containing complexes

Nitric oxide reduction yielding N₂O is known as a route to detoxify nitric oxide (NO) to relieve nitrosative stress in pathogenic bacteria and fungi. Nitric oxide enzymes are classified into Cu/Fe-heme NO reductases (NORs) and non-heme flavindiiron NO reductases (FNORs). In biological system, the mechanism of NO reduction generating N₂O was proposed to involve NO coordination to metal centers prior to producing cis/trans-hyponitrite-bound intermediate, and the subsequent protonation of hyponitrite-bound-Fe/Cu intermediates releases N₂O. In this review article, we compile the recently published biomimetic model studies of NO-to-[N₂O₂]²⁻ transformation triggered by the designed transition-metal complexes. In biomimetic model study, the ON-NO bond coupling of metal-nitrosyl complexes yielding [N₂O₂]²⁻-bound species may occur via either the inter/intramolecular radical-[NO]⁻-radical-[NO]⁻ coupling or metal-[NO]²⁻ radical coupling with exogenous NO˙. The H-bonding interaction between hyponitrite and protic solvents promoting/stabilizing the formation of hyponitrite complexes was also demonstrated. In addition, the electronic structure of the designed transition-metal-nitrosyl complexes triggering the formation of [N₂O₂]²⁻-bound species and the detailed NO-to-[N₂O₂]²⁻ formation pathways were delineated.     

Conversion of Nitric Oxide into Nitrous Oxide as Triggered by the Polarization of Coordinated NO by Hydrogen Bonding

Reduction of the {Co(NO)}⁸ cobalt–nitrosyl N‐confused porphyrin (NCP) [Co(CTPPMe)(NO)] ( 1 ) produced electron‐rich {Co(NO)}⁹ [Co(CTPPMe)(NO)][Co(Cp*)₂] ( 2 ), which was necessary for NO‐to‐N₂O conversion. Complex 2 was NO‐reduction‐silent in neat THF, but was partially activated to a hydrogen‐bonded species 2 ??? MeOH in THF/MeOH (1:1, v/v). This species coupling with 2 transformed NO into N₂O, which was fragmented from an [N₂O₂]‐bridging intermediate. An intense IR peak at 1622 cm^?1 was ascribed to ν(NO) in an [N₂O₂]‐containing intermediate. Time–course ESI(?) mass spectra supported the presence of the dimeric [Co(NCP)]₂(N₂O₂) intermediate. Five complete NO‐to‐N₂O conversion cycles were possible without significant decay in the amount of N₂O produced.     

Effect of hemoglobin on the NO-donor ability of μ<Superscript>2</Superscript>-<Emphasis Type="Italic">S</Emphasis>-bis(pyrimidine-2-thiolato)tetranitrosyldiiron

The hydrolysis of the iron nitrosyl complex [Fe₂(μ₂-SC₄H₃N₂)₂(NO)₄](C₄H₃N₂S^? is pyrimidine-2-thiolate) in the presence of hemoglobin (Hb) is accompanied by the NO release into a solution. In the absence of Hb, the starting complex is oxidized by nitric oxide that is released into a solution, which leads to further transformations of NO, nitric oxide being present in the solution only partially. The effective rate constant for the decomposition of the complex is high and depends on its concentration. On the one hand, in the presence of Hb, NO molecules rapidly and irreversibly bind to Hb to form HbNO, which is the intermediate in the nitric oxide metabolism. On the other hand, the reversible binding of the iron nitrosyl complex to the surface functional groups of Hb leads to a decrease in its concentration in a solution and deceleration of the formation of NO. Therefore, Hb can ensure the complete and more prolonged assimilation of NO.     

Trapping and Reactivity of a Molecular Aluminium Oxide Ion

Aluminium oxides constitute an important class of inorganic compound that are widely exploited in the chemical industry as catalysts and catalyst supports. Due to the tendency for such systems to aggregate via Al‐O‐Al bridges, the synthesis of well‐defined, soluble, molecular models for these materials is challenging. Here we show that reactions of the potassium aluminyl complex K₂[( NON )Al]₂ ( NON =4,5‐bis(2,6‐diiso‐propylanilido)‐2,7‐di‐tert‐butyl‐9,9‐dimethylxanthene) with CO₂, PhNCO and N₂O all proceed via a common aluminium oxide intermediate. This highly reactive species can be trapped by coordination of a THF molecule as the anionic oxide complex [( NON )AlO(THF)]^?, which features discrete Al?O bonds and dimerizes in the solid state via weak O???K interactions. This species reacts with a range of small molecules including N₂O (to give a hyponitrite ([N₂O₂]^2?) complex) and H₂, the latter offering an unequivocal example of heterolytic E?H bond cleavage across a main group M?O bond.     

A cyano‐bridged dinuclear 4f–3d array

A cyano‐bridged bimetallic 4f–3d complex, tri­aqua‐1κ³O‐μ‐cyano‐1:2κ²N:C‐penta­cyano‐2κ⁵C‐tetrakis(2‐pyrrolidone‐1κO)­chromium(III)­dysprosium(III) dihydrate, [CrDy(C₄H₇NO)₄(CN)₆(H₂O)₃]·2H₂O, has been prepared and characterized by X‐ray crystallographic analysis. The structure consists of a neutral cyano‐bridged Dy–Cr dimer. A hydrogen‐bonded three‐dimensional architecture is formed through N—H?O, O—H?N and O—H?O hydrogen bonds.     

Cover: Journal of the Chinese Chemical Society 2/2020

This invited paper depicts that nitric oxide reductases have been recognized as NO denitrification to N₂O by utilizing transition metal ions cofactor. Biomimetic model study signifies that transition metal-mediated NO-to-[N₂O₂]²⁻-to-N₂O transformation via either the inter/intra-molecular [NO]⁻-[NO]⁻ coupling or metal-[NO]²⁻ radical coupling with exogenous ·NO. More details about this figure will be discussed by Prof. Wen-Feng Liaw and his co-worker on page 260–266 in this issue.

     

Bis(methanol‐κO)dioxido[3,3′‐(1H‐1,2,4‐triazole‐3,5‐diyl)diphenolato‐κ3O,N4,O′]uranium(VI) methanol monosolvate

The structure of the title compound, [U(C₁₄H₉N₃O₂)O₂(CH₃OH)₂]·CH₃OH, is the first to be reported for an actinide complex including triazole ligands. The U^VI atom exhibits a pentagonal–bipyramidal NO₆ coordination environment, involving two axial oxide ligands [U=O = 1.766 (3) and 1.789 (3) Å], four equatorial O atoms [U—O = 2.269 (3)–2.448 (3) Å] from the ligand and the two coordinated methanol molecules, and one equatorial N atom [U—N = 2.513 (4) Å] from the ligand. In the crystal structure, the complex molecules are linked via intermolecular N—H...O and O—H...O hydrogen bonds to form a two‐dimensional structure.     

Low-temperature activation of nitrogen oxide on Cu-ZSM-5 catalysts

The adsorption and activation of NO molecules on Cu-ZSM-5 catalysts with different Cu/Al and Si/Al ratios (from 0.05 to 1.4 and from 17 to 45, respectively) subjected to different pretreatment was studied by ultraviolet-visible diffuse reflectance (UV-Vis DR). It was found that the amount of chemisorbed NO and the catalyst activity in NO decomposition increased with an increase in the Cu/Al ratio to 0.35–0.40. The intensity of absorption bands at 18400 and 25600 cm⁻¹ in the UV-Vis DR spectra increased symbatically. It was hypothesized that the adsorption of NO occurs at Cu⁺ ions localized in chain copper oxide structures with the formation of mono- and dinitrosyl Cu(I) complexes, and this process is accompanied by the Cu²⁺...Cu⁺ intervalence transfer band in the region of 18400 cm⁻¹. The low-temperature activation of NO occurs through the conversion of the dinitrosyl Cu(I) complex into the π-radical anion (N₂O₂)⁻ stabilized at the Cu²⁺ ion of the chain structure, [Cu²⁺-cis-(N₂O₂)⁻], by electron transfer from the Cu⁺ ion to the cis dimer (NO)₂. This complex corresponds to the L → M charge transfer band in the region of 25600 cm⁻¹. The subsequent destruction of the complex [Cu²⁺-cis-(N₂O₂)⁻] at temperatures of 150–300°C leads to the release of N₂O and the formation of the complex [Cu²⁺O⁻], which further participates in the formation of the nitrite-nitrate complexes [Cu²⁺(NO₂)⁻], [Cu²⁺(NO)(NO₂)⁻], and [Cu²⁺(NO₃)⁻] and NO decomposition products.     

1,1′‐Dimethoxy‐3,3′‐dimethyl‐3,3′‐(hexane‐1,6‐diyl)bis(triazen‐2‐ium‐2‐olate): a nitric oxide donor

The title compound, C₁₀H₂₄N₆O₄, is the most stable type of nitric oxide (NO) donor among the broad category of discrete N‐diazeniumdiolates (NO adducts of nucleophilic small molecule amines). Sitting astride a crystallographic inversion center, the molecule contains a symmetric dimethylhexane‐1,6‐diamine structure bearing two planar O²‐methylated N‐diazeniumdiolate functional groups [N(O)=NOMe]. These two groups are parallel to each other and have the potential to release four molecules of NO. The methylated diazeniumdiolate substituent removes the negative charge from the typical N(O)=NO⁻ group, thereby increasing the stability of the diazeniumdiolate structure. The crystal was nonmerohedrally twinned by a 180° rotation about the real [101] axis. This is the first N‐based bis‐diazeniumdiolate compound with a flexible aliphatic main unit to have its structure analyzed and this work demonstrates the utility of stabilizing the N‐diazeniumdiolate functional group by methylation.     

A [Fe(CB6)] platform for binding of small molecules: Insights from DFT calculations

The viability of making [Fe(CB₆)L] (L = H₂, N₂, O₂, nitric oxide [NO^?, NO, and NO⁺], CO₂, and hydrocarbons [CH₄, C₂H₆, C₂H₄, and C₆H₆]) has been investigated by density functional theory (DFT) calculations. The complexes 2 – 18 are thermodynamically stable and may be synthesized. The small molecules are activated to some extent after complexation. Molecular orbital and ΔG calculation revealed that the molecular hydrogen and hydrocarbons can be chemically adsorbed and desorbed on [Fe(CB₆)] without any significant chemical modification and therefore [Fe(CB₆)] may serve as a storage material. The N₂, O₂, and nitric oxide (NO^?, NO, and NO⁺) can be activated using [Fe(CB₆)]. Proton, carbon, boron, and nitrogen NMR chemical shift calculation predicts drastic chemical shift difference before and after the complexation of [Fe(CB₆)] with small molecules. This new findings suggest that the CB₆^2? ligand‐based complex may provide several applications in the future. © 2012 Wiley Periodicals, Inc.     

The HNO donor ability of hydroxamic acids upon oxidation with cyanoferrates(III)

The hydroxamic acids (RC(O)NHOH, HA) exhibit diverse biological activity, including hypotensive properties associated with formation of nitroxyl (HNO) or nitric oxide (NO). Oxidation of two HAs, benzohydroxamic and acetohydroxamic acids (BHA, AHA) by [Fe(CN)₅NH₃]^2? or [Fe(CN)₆]^3? was analyzed by spectroscopic, mass spectrometric techniques, and flow EPR measurements. Mixing BHA with both Fe(III) reactants at pH 11 allowed detecting the hydroxamate radical, (C₆H₅)C(O)NO˙^?, as a one-electron oxidation product, as well as N₂O as a final product. Successive UV–vis spectra of mixtures containing [Fe(CN)₅NH₃]^2? (though not [Fe(CN)₆]^3?) at pH 11 and 7 revealed an intermediate acylnitroso-complex, [Fe(CN)₅NOC(O)(C₆H₅)]^3? (λ_max, 465 nm, very stable at pH 7), formed through ligand interchange in the initially formed reduction product, [Fe(CN)₅NH₃]^3?, and characterized by FTIR spectra through the stretching vibrations ν_(CN), ν_(CO), and ν_(NO). Free acylnitroso derivatives, formed by alternative reaction paths of the hydroxamate radicals, hydrolyze forming RC(O)OH and HNO, postulated as precursor of N₂O. Minor quantities of NO are formed only with an excess of oxidant. The intermediacy of HNO was confirmed through its identification as [Fe(CN)₅(HNO)]^3? (λ_max, 445 nm) as a result of hydrolysis of [Fe(CN)₅(NOC(O)(C₆H₅)]^3? at pH 11. The results demonstrate that hydroxamic acids behave predominantly as HNO donors.     

Metal‐Free,Room‐Temperature Oxygen‐Atom Transfer in the N2O/CO Redox Couple as Catalyzed by [Si2Ox].+ (x=2–5)

The thermal reduction of N₂O by CO mediated by the metal‐free cluster cations [Si₂O_x]^.+ (x =2–5) has been examined in the gas phase using Fourier transform ion cyclotron resonance (FT‐ICR) mass spectrometry in conjunction with quantum chemical calculations. Three successive oxidation/reduction steps occur starting from [Si₂O₂]^.+ and N₂O to form eventually [Si₂O₅]^.+; the latter as well as the intermediate oxide cluster ions react sequentially with CO molecules to regenerate [Si₂O₂]^.+. Thus, full catalytic cycles occur at ambient conditions in the gas phase. Mechanistic aspects of these sequential redox processes have been addressed to reveal the electronic origins of these unparalleled reactions.     

Nickel-mediated N–N bond formation and N2O liberation via nitrogen oxyanion reduction

The syntheses of (DIM)Ni(NO₃)₂ and (DIM)Ni(NO₂)₂, where DIM is a 1,4-diazadiene bidentate donor, are reported to enable testing of bis boryl reduced N-heterocycles for their ability to carry out stepwise deoxygenation of coordinated nitrate and nitrite, forming O(Bpin)₂. Single deoxygenation of (DIM)Ni(NO₂)₂ yields the tetrahedral complex (DIM)Ni(NO)(ONO), with a linear nitrosyl and κ¹-ONO. Further deoxygenation of (DIM)Ni(NO)(ONO) results in the formation of dimeric [(DIM)Ni(NO)]₂, where the dimer is linked through a Ni–Ni bond. The lost reduced nitrogen byproduct is shown to be N₂O, indicating N–N bond formation in the course of the reaction. Isotopic labelling studies establish that the N–N bond of N₂O is formed in a bimetallic Ni₂ intermediate and that the two nitrogen atoms of (DIM)Ni(NO)(ONO) become symmetry equivalent prior to N–N bond formation. The [(DIM)Ni(NO)]₂ dimer is susceptible to oxidation by AgX (X = NO₃⁻, NO₂⁻, and OTf⁻) as well as nitric oxide, the latter of which undergoes nitric oxide disproportionation to yield N₂O and (DIM)Ni(NO)(ONO). We show that the first step in the deoxygenation of (DIM)Ni(NO)(ONO) to liberate N₂O is outer sphere electron transfer, providing insight into the organic reductants employed for deoxygenation. Lastly, we show that at elevated temperatures, deoxygenation is accompanied by loss of DIM to form either pyrazine or bipyridine bridged polymers, with retention of a BpinO⁻ bridging ligand.

Deoxygenation of nitrogen oxyanions coordinated to nickel using reduced borylated heterocycles leads to N–N bond formation and N₂O liberation. The nickel dimer product facilitates NO disproportionation, leading to a synthetic cycle.     

Spectroscopic and Computational Study of a Nonheme Iron Nitrosyl Center in a Biosynthetic Model of Nitric Oxide Reductase

A major barrier to understanding the mechanism of nitric oxide reductases (NORs) is the lack of a selective probe of NO binding to the nonheme Fe_B center. By replacing the heme in a biosynthetic model of NORs, which structurally and functionally mimics NORs, with isostructural ZnPP, the electronic structure and functional properties of the Fe_B nitrosyl complex was probed. This approach allowed observation of the first S=3/2 nonheme {FeNO}⁷ complex in a protein‐based model system of NOR. Detailed spectroscopic and computational studies show that the electronic state of the {FeNO}⁷ complex is best described as a high spin ferrous iron (S=2) antiferromagnetically coupled to an NO radical (S= 1/2) [Fe²⁺‐NO^.]. The radical nature of the Fe_B‐bound NO would facilitate N? N bond formation by radical coupling with the heme‐bound NO. This finding, therefore, supports the proposed trans mechanism of NO reduction by NORs.     

A three‐dimensional hybrid framework based on novel [Co4Mo4] bimetallic oxide clusters with 3,5‐bis(3‐pyridyl)‐1,2,4‐triazole ligands

In the title organic–inorganic hybrid complex, poly[[[μ‐3,5‐bis(3‐pyridyl)‐1,2,4‐triazole]tri‐μ₃‐oxido‐tetra‐μ₂‐oxido‐oxidodicobalt(II)dimolybdenum(VI)] monohydrate], {[Co₂Mo₂O₈(C₁₂H₉N₅)]·H₂O}_n, the asymmetric unit is composed of two Co^II centers, two [Mo^VIO₄] tetrahedral units, one neutral 3,5‐bis(3‐pyridyl)‐1,2,4‐triazole (BPT) ligand and one solvent water molecule. The cobalt centers both exhibit octahedral [CoO₅N] coordination environments. Four Co^II and four Mo^VI centers are linked by μ₂‐oxide and/or μ₃‐oxide bridges to give an unprecedented bimetallic octanuclear [Co₄Mo₄O₂₂N₄] cluster, which can be regarded as the first example of a metal‐substituted octamolybdate and exhibits a structure different from those of the eight octamolybdate isomers reported to date. The bimetallic oxide clusters are linked to each other through corner‐sharing to give two‐dimensional inorganic layers, which are further bridged by trans‐BPT ligands to generate a three‐dimensional organic–inorganic hybrid architecture with six‐connected distorted α‐Po topology.     

Low-dimensional compounds containing bioactive ligands. XXII. First crystal structure,cytotoxic activity and DNA and HSA binding of a zirconium(IV) complex with 8-hydroxyquinoline-2-carboxylic acid

A new zirconium(IV) complex, diaquabis(8-hydroxyquinoline-2-carboxylato-κ³N,O²,O⁸)zirconium(IV) dimethylformamide disolvate, [Zr(C₁₀H₅NO₃)₂(H₂O)₂]·2C₃H₇NO or [Zr(QCa)₂(H₂O)₂]·2DMF ( 1 ) (HQCaH is 8-hydroxyquinoline-2-carboxylic acid and DMF is dimethylformamide), was prepared and characterized by elemental analysis, IR spectroscopy and single-crystal X-ray structure analysis. Complex 1 is a mononuclear complex in which the Zr^IV atoms sit on the twofold axis and they are octacoordinated by two N and six O atoms of two tridentate anionic QCa²⁻ ligands, and two aqua ligands. Outside the coordination sphere are two DMF molecules bound to the complex unit by hydrogen bonds. The structure and stability of complex 1 in dimethyl sulfoxide were verified by NMR spectroscopy. The cytotoxic properties of 1 and HQCaH were studied in vitro against eight cancer cell lines, and their selectivity was tested on the BJ-5ta noncancerous cell line. Both the complex and HQCaH exhibited low activity, with IC₅₀ > 200 µM. DNA and human serum albumin (HSA) binding studies showed that 1 binds to calf thymus (CT) DNA via intercalation and is able to bind to the tryptophan binding site of HSA (Trp-214).     

A Highly Oxidizing and Isolable Oxoruthenium(V) Complex [RuV(N4O)(O)]2+: Electronic Structure,Redox Properties,and Oxidation Reactions Investigated by DFT Calculations

The electronic structure and redox properties of the highly oxidizing, isolable Ru^V?O complex [Ru^V(N₄O)(O)]²⁺, its oxidation reactions with saturated alkanes (cyclohexane and methane) and inorganic substrates (hydrochloric acid and water), and its intermolecular coupling reaction have been examined by DFT calculations. The oxidation reactions with cyclohexane and methane proceed through hydrogen atom transfer in a transition state with a calculated free energy barrier of 10.8 and 23.8 kcal mol^?1, respectively. The overall free energy activation barrier (ΔG^≠=25.5 kcal mol^?1) of oxidation of hydrochloric acid can be decomposed into two parts: the formation of [Ru^III(N₄O)(HOCl)]²⁺ (ΔG=15.0 kcal mol^?1) and the substitution of HOCl by a water molecule (ΔG^≠=10.5 kcal mol^?1). For water oxidation, nucleophilic attack on Ru^V?O by water, leading to O? O bond formation, has a free energy barrier of 24.0 kcal mol^?1, the major component of which comes from the cleavage of the H? OH bond of water. Intermolecular self‐coupling of two molecules of [Ru^V(N₄O)(O)]²⁺ leads to the [(N₄O)Ru^IV? O₂? Ru^III(N₄O)]⁴⁺ complex with a calculated free energy barrier of 12.0 kcal mol^?1.     

Not Limited to Iron: A Cobalt Heme–NO Model Facilitates N–N Coupling with External NO in the Presence of a Lewis Acid to Generate N2O

Some bacterial heme proteins catalyze the coupling of two NO molecules to generate N₂O. We previously reported that a heme Fe–NO model engages in this N?N bond‐forming reaction with NO. We now demonstrate that (OEP)Co^II(NO) similarly reacts with 1 equiv of NO in the presence of the Lewis acids BX₃ (X=F, C₆F₅) to generate N₂O. DFT calculations support retention of the Co^II oxidation state for the experimentally observed adduct (OEP)Co^II(NO?BF₃), the presumed hyponitrite intermediate (P^.+)Co^II(ONNO?BF₃), and the porphyrin π‐radical cation by‐product of this reaction, and that the π‐radical cation formation likely occurs at the hyponitrite stage. In contrast, the Fe analogue undergoes a ferrous‐to‐ferric oxidation state conversion during this reaction. Our work shows that cobalt hemes are chemically competent to engage in the NO‐to‐N₂O conversion reaction.     

Four‐ and five‐coordinate copper(II) complexes with N‐(4,4‐diphenyl‐5‐oxo‐4,5‐dihydro‐1H‐imidazol‐2‐yl)glycine

The two title mononuclear compounds are four‐coordinate bis[N‐(5‐oxo‐4,4‐diphenyl‐4,5‐dihydro‐1H‐imidazolidin‐2‐ylidene)glycinato]copper(II) dimethylformamide disolvate, [Cu(C₁₇H₁₄N₃O₃)₂]·2C₃H₇NO, (I), and five‐coordinate aquabis[N‐(5‐oxo‐4,4‐diphenyl‐4,5‐dihydro‐1H‐imidazolidin‐2‐ylidene)glycinato]copper(II) dimethylformamide disolvate, [Cu(C₁₇H₁₄N₃O₃)₂(H₂O)]·2C₃H₇NO, (II). In (I), the Cu^II ion lies on an inversion centre with one‐half of the complex molecule in the asymmetric unit, while in (II) there are two independent ligand molecules in the asymmetric unit, with the Cu^II ion and coordinated water molecule located on a general position. In both crystal structures, the complex molecules assemble in ribbons via N—H...O hydrogen‐bond networks.     

Stabilization of tetrameric metavanadate ion by tris(1,10-phenanthroline)cobalt(III): synthesis,spectroscopic, and X-ray structural study of [Co(phen)3]3(V4O12)2Cl · 27H2O

A new complex salt of composition [Co(phen)₃]₃(V₄O₁₂)₂Cl ? 27H₂O (phen = 1,10-phenanthroline and [V₄O₁₂]^4? = tetrameric metavanadate, dodecaoxotetravanadate ion) was synthesized by the reaction of appropriate salts in aqueous medium. The complex salt has been characterized by elemental analyses, thermogravimetric analysis, cyclic voltammetry, FT-IR, and UV-Vis spectroscopies, solubility product and conductance measurements. Single crystal X-ray structure determination revealed ionic structure consisting of three complex cations, [Co(phen)₃]³⁺, two [V₄O₁₂]^4? anions, one chloride and 27 lattice water molecules. Detailed structural and spectroscopic analyses of [Co(phen)₃]₃(V₄O₁₂)₂Cl ? 27H₂O showed that the large anion is stabilized by large cationic metal complex as there is preferred shape compatibility that leads to a large number of lattice-stabilizing non-covalent interactions.