X-ray spectroscopy of enzyme active site analogues and related molecules: bis(dithiolene)molybdenum(IV) and -tungsten(IV,VI) complexes with variant terminal ligands

The X-ray absorption spectra at the molybdenum and selenium K-edges and the tungsten L2,3-edges are acquired for a set of 14 Mo(IV) and W(IV,VI) bis(dithiolene) complexes related to the active sites of molybdo- and tungstoenzymes. The set includes square pyramidal [MoIVL(S2C2Me2)2]- (L = O2-, R3SiO-, RO-, RS-, RSe-) and [WIV(OR)(S2C2Me2)2]-, distorted trigonal prismatic [MoIV(CO)(SeR)(S2C2Me2)2]- and [WIV(CO)L(S2C2Me2)2]- (L = RS-, RSe-), and distorted octahedral [WVIO(OR)(S2C2Me2)2]-. The dithiolene simulates the pterin-dithiolene cofactor ligand, and L represents a protein ligand. Bond lengths are determined by EXAFS analysis using the GNXAS protocol. Normalized edge spectra, non-phase-shift-corrected Fourier transforms, and EXAFS data and fits are presented. Bond lengths determined by EXAFS and X-ray crystallography agree to < or = 0.02 A as do the M-Se distances determined by both metal and selenium EXAFS. The complexes [MoIV(QR)(S2C2Me2)2]- simulate protein ligation by the DMSO reductase family of enzymes, including DMSO reductase itself (Q = O), dissimilatory nitrate reductase (Q = S), and formate dehydrogenase (Q = Se). Edge shifts of these complexes correlate with the ligand electronegativities. Terminal ligand binding is clearly distinguished in the presence of four Mo-S(dithiolene) interactions. Similarly, five-coordinate [ML(S2C2Me2)2]- and six-coordinate [M(CO)L(S2C2Me2)2]- are distinguishable by edge and EXAFS spectra. This study expands a previous XAS investigation of bis(dithiolene)metal(IV,V,VI) complexes (Musgrave, K. B.; Donahue, J. P.; Lorber, C.; Holm, R. H.; Hedman, B.; Hodgson, K. O. J. Am. Chem. Soc. 1999, 121, 10297) by including a larger inventory of molecules with variant physiologically relevant terminal ligation. The previous and present XAS results should prove useful in characterizing and refining metric features and structures of enzyme sites.     

Versatile new uranyl(VI) dihalide complexes supported by tunable organic amide ligands

A series of uranyl(VI) dihalide complexes UO2X2L2 (X = Cl, Br) supported by organic amide ligands (L = R'C(O)NR2; R' = i-Pr; R = i-Pr, i-Bu, s-Bu) offers the versatile combination of facile synthesis using benchtop methods, air-stable crystalline solids obtained in high yield, high solubility in common organic solvents and tunable steric/electronic properties.     

Generation of bis(dithiolene)dioxomolybdenum(VI) complexes from bis(dithiolene)monooxomolybdenum(IV) complexes by proton-coupled electron transfer in aqueous media

Electron transfer oxidation reaction of bis(dithiolene)monooxomolybdenum(iv) (Mo(IV)OL(x)) complexes is studied as a model of oxidative-half reaction of arsenite oxidase molybdenum enzymes. The reactions are revealed to involve proton-coupled electron transfer. Electrochemical oxidation of Mo(IV)OL(x) yields the corresponding bis(dithiolene)dioxomolybdenum(vi) complexes in basic solution, where the conversion of Mo(IV)OL(dmed) supported by a smaller electron donating dithiolene ligand (1,2-dicarbomethoxyethylene-1,2-dithiolate, L(dmed)) to Mo(VI)O(2)L(dmed) is faster than that of Mo(IV)OL(bdt) with a larger electron donating dithiolene ligand (1,2-benzenedithiolate, L(bdt)) under the same conditions. Titration experiments for the electrochemical oxidation reveal that the reaction involves two-electron oxidation and two equivalents of OH(-) consumption per Mo(IV)OL(x). In the conversion process of Mo(IV)OL(x) to Mo(VI)O(2)L(x), the five-coordinate bis(dithiolene)monooxomolybdenum(v) complex (Mo(V)OL(x)) being a one-electron oxidized species of Mo(IV)OL(x) is suggested to react with OH(-). Mo(V)OL(x) reacts with OH(-) in CH(3)CN or C(2)H(5)CN in a 2?:?2 ratio to give one equivalent Mo(IV)OL(x) and one equivalent Mo(VI)O(2)L(x), which is confirmed by the UV-vis and IR spectroscopies. The low temperature stopped-flow analysis allows investigations of the mechanism for the reaction of Mo(V)OL(x) with OH(-). The kinetic study for the reaction of Mo(V)OL(dmed) with OH(-) suggests that Mo(V)OL(dmed) reacts with OH(-) to give a six-coordinate oxo-hydroxo-molybdenum(v) species, Mo(V)O(OH), and, then, the resulting species undergoes successive deprotonation by another OH(-) and oxidation by a remaining Mo(V)OL(dmed) to yield the final products Mo(IV)OL(dmed) and Mo(VI)O(2)L(dmed) complexes in a 1?:?1 ratio. In this case, the Mo(V)O(2) species are involved as an intermediate in the reaction. On the other hand, in the reaction of Mo(V)OL(bdt) with OH(-), coordination of OH(-) to the Mo(V) centre to give a six-coordinate Mo(V)O(OH)L(bdt) species becomes the rate limiting step and other intermediates are not suggested. On the basis of these results, the ligand effects of the dithiolene ligands on the reactivity of the bis(dithiolene)molybdenum complexes are discussed.     

Preparation and characterizations of new U(IV) and U(VI) complexes with carboxylate ligands

The synthesis and characterization of some uranyl(VI) complexes containing glycolate (gly = CH₂OHCOO⁻) and methoxyacetate (MeOAc = CH₃OCH₂COO⁻) ligands with metal:ligand ratios of 1:1 and 1:2 are reported. In addition, new stable uranium(IV) complexes containing the same ligands, or the oxydiacetate (oda = ⁻OOCCH₂OCH₂COO⁻) anion, have been prepared by photolysing aqueous solutions of uranyl(VI) nitrate in the presence of an excess of ligand. The possible structures of these complexes are discussed on the basis of IR results. The photoproduction mechanism of U(IV) complexes is proposed from electronic and spectrofluorimetric spectra and quantum yield data.     

Trimethylplatinum(IV) complexes with ON bidentate ligands

Complexes of the trimethylplatinum(IV) moiety with bidentate monobasic salicylaldimines C₆H₅(OH)CHNR (R = ethyl, propyl, phenyl) have been prepared and characterized by IR, UV and NMR spectra and magnetic susceptibility measurements. The complexes are dimeric with double PtOPt bridges, and the metal appears to be pseudo-octahedrally hexacoordinated.     

Oxidomolybdenum(VI) complexes with atrane-type [O3N] ligands

Dioxomolybdenum(VI) complex [MoO₂Cl₂(dmso)₂] reacts with a series of tetradentate O₃N-type aminoalcohol–bisphenol ligands to form oxomolybdenum(VI) complexes of type [MoOCl(Lⁿ)]. The reaction of H₃L¹ produces [MoOCl(L¹)] as two separable isomers, whereas the reaction of H₃L² or H₃L³ yields a single product. The X-ray analyses of cis- and trans-[MoOCl(L¹)] reveal that the complexes are formed of monomeric molecules. The ligands have tetradentate coordination through three oxygen donors and one nitrogen donor, which is located trans to the terminal oxo group. The sixth coordination site is occupied by a chloro ligand.     

Terminal cobalt(III) imido complexes supported by tris(carbene) ligands: imido insertion into the cobalt-carbene bond

Highly reactive tris-carbene Co(I) complexes [(TIMENaryl)Co]Cl react with organic azides to yield monomeric Co(III) imido complexes [(TIMENaryl)Co(NAr')](BPh4) (aryl = mes, xyl; Ar = -C6H4-CH3, -C6H4-OCH3). The cobalt-imido fragment in these complexes is electrophilic and, as a result, the imido group readily inserts into the cobalt-carbene bond, yielding bis-carbene imine cobalt complexes.     

Tungsten(VI) complexes with aminobis(phenolato) [O,N,O] donor ligands

The reaction between trisdiolatotungsten(VI) complex [W(eg)(3)] (1) (eg = 1,2-ethanediolato dianion) and phenolic ligand precursor methylamino-N,N-bis(2-methylene-4,6-dimethylphenol) (H(2)L(Me)) or methylamino-N,N-bis(2-methylene-4-methyl-6-tert-butylphenol) (H(2)L(tBu)) affords monomeric oxotungsten complex [WO(eg)(L(Me))] (2) or [WO(eg)(L(tBu))] (3), respectively. These complexes react further with chlorinating reagents, which leads to the displacement of ethanediolato ligands from the complex units and formation of cis and trans isomers of the corresponding dichloro complexes [WOCl(2)(L(Me))] (4) and [WOCl(2)(L(tBu))] (5), respectively. Identical dichloro complexes were also prepared by the reaction between the above-mentioned phenolic ligand precursors and [WOCl(4)]. Molecular structures of 3, cis-4, trans-4, and cis-5 were verified by X-ray crystallography. Complexes 2-5 can be activated by Et(2)AlCl to catalyze ring-opening metathesis polymerization of norbornene.     

Structure and O2-reactivity of copper(I) complexes supported by pyridylalkylamine ligands

The structure and O2-reactivity of a series of copper(I) complexes supported by the pyridylalkylamine ligands are summarized, and the ligand effects such as the chelate ring size effect (five- vs. six-membered ring), the denticity effect (tetradentate vs. tridentate vs. didentate), the steric effect of 6-methylpyridine and the steric and/or electronic effects of N-alkyl substituents are discussed in detail.     

Synthesis and characterization of new organotin(IV) complexes with polyfunctional ligands

New mono-, di- and tri-organotin(IV) derivatives containing the neutral bis(2-pyridylthio)methane ligand, [(pyS)₂CH₂] and tris(2-pyridylthio)methane ligand, [(pyS)₃CH] have been synthesized from reaction with SnR_nCl_4−n (R = Me, ⁿBu, Ph and Cy, n = 1-3) acceptors. Mono-nuclear adducts of the type {[(pyS)₂CH₂]R_nSnCl_4−n} and {[(pyS)₃CH]R_nSnCl_4−n} have been obtained and characterized by elemental analyses, FT-IR, ESI-MS, multinuclear (¹H and ¹¹⁹Sn) NMR spectral data. The ¹H and ¹¹⁹Sn NMR and ESI-MS data suggest for the triorganotin(IV) derivatives a complete dissociation of the compounds in solution. The mono- and di-organotin(IV) derivatives show a greater stability in solution, and their spectroscopic data are in accordance with the existence of six-coordinated RSnCl₃N₂ or R₂SnCl₂N₂ species.     

The uranium-nitrogen bond in U IV complexes supported by the hydrotris(3,5-dimethylpyrazolyl)borate ligand

Insertion of benzonitrile and acetonitrile into the U-C bond of [U(Tp(Me2))Cl(2)(CH(2)SiMe(3))](Tp(Me2)= HB(3,5-Me(2)pz)(3)) gives the ketimide complexes [U(Tp(Me2))Cl(2){NC(R)(CH(2)SiMe(3))}](R = Ph (1); Me (2)). The identity of complex was ascertained by a single-crystal X-ray diffraction study. In the solid state exhibits octahedral geometry with a short U-N bond length to the ketimide ligand. We also report herein the synthesis and the X-ray crystal structures of the uranium amide complexes [U(Tp(Me2))Cl(2)(NR(2))](R = Et (3); Ph (4)). A detailed comparison of the U-N bond lengths in these compounds with other known U-N (and Th-N) distances in amide and ketimide actinide(IV) complexes is performed, confirming the short character of the U-N bond length in 1.     

Synthesis, structure, and catalytic properties of V(IV), Mn(III), Mo(VI), and U(VI) complexes containing bidentate (N, O) oxazine and oxazoline ligands

Synthesis of seven complexes containing oxazoline ([(L(1))(2)V=O] (4), [(L(1))(2)MoO(2)] (5), [(L(1))(2)UO(2)] (6); HL(1) (1) [HL(1) = 2-(4',4'-dimethyl-3'-4'-dihydroxazol-2'-yl)phenol]), chiral oxazoline ([(L(2))(2)UO(2)] (7); HL(2) (2) [HL(2) = (4'R)-2-(4'-ethyl-3'4'-dihyroxazol-2'-yl)phenol]), and oxazine ([(L(3))(2)V=O] (8), [(L(3))(2)Mn(CH(3)COO(-))] (9), [(L(3))(2)Co] (10); HL(3) (3) [HL(3) = 2-(5,6-dihydro-4H-1,3-oxazolinyl)phenol]) and their characterization by various techniques such as UV-vis, IR, and EPR spectroscopy, mass spectrometry, cyclic voltammetry, and elemental analysis are reported. The novel oxazine (3) and complexes 4, 5, 8 and 9 were also characterized by X-ray crystallography. Oxazine 3 crystallizes in the monoclinic system with the P2(1)/n space group, complexes 4 and 9 crystallize in the monoclinic system with the P2(1)/c space group, and complexes 5 and 8 crystallize in the orthorhombic system with the C222(1) space group and the P2(1)2(1)2(1) chiral space group, respectively. The representative synthetic procedure involves the reaction of metal acetate or acetylacetonate derivatives with corresponding ligand in ethanol. Addition of Mn(OAc)(2).4H(2)O to an ethanol solution of 3 gave the unexpected complex Mn(L(3))(2).(CH(3)COO(-)) (9) where the acetate group is coordinated with the metal center in a bidentate fashion. The catalytic activity of complexes 4-9 for oxidation of styrene with tert-butyl hydroperoxide was tested. In all cases, benzaldehyde formed exclusively as the oxidation product.     

Synthesis and structures of bis(dithiolene)tungsten(IV,VI) thiolate and selenolate complexes: approaches to the active sites of molybdenum and tungsten formate dehydrogenases

Formate dehydrogenases are molybdenum- or tungsten-containing enzymes that catalyze the oxidation of formate to carbon dioxide. Among the significant characteristics of the mononuclear active sites are coordination of two pyranopterindithiolene ligands and selenocysteinate to the metal in oxidation states IV-VI. The first detailed investigation of the synthesis and structures of bis(dithiolene)tungsten selenolate and analogous thiolate complexes of relevance to formate dehydrogenases has been undertaken. Some 17 complexes of the types [WIV(QR)(S2C2Me2)2]-, [WVIO(QR)(S2C2Me2)2]-, and [WVIS(QR)(S2C2Me2)2]- (Q = S, Se; R = tert-butyl, 1-adamantyl) and the desoxo species [WVI(SR)(OSiR'3)(S2C2Me2)2] (R' = Me, Ph) were prepared. Ten structures of representative members of these types were determined; WIV complexes are square-pyramidal and WVI complexes are six-coordinate, with geometries intermediate between octahedral and trigonal-prismatic. Selenolate complexes are less stable than similar thiolate species; decomposition products were identified as [WV2(mu2-Q)2(S2C2Me2)2]2- and [WIV,V2(mu2-Se)(S2C2Me2)4]-. The several [MoIV(QR)(S2C2Me2)2]- complexes prepared earlier and the tungsten compounds synthesized in this work form a family of molecules whose overall stereochemistry and metric features are those expected in the absence of protein structural constraints.     

Ruthenium complexes with tridentate PNX (X = O, S) donor ligands

The ligands, PhPNXMe (1), PhPNXPh (2), and PhPNSMe (3), (PhPNX = 2-Ph2P-C6H4CH[double bond, length as m-dash]NC6H4X-2; X = O, S) have been prepared. A range of new ruthenium complexes were synthesised using these and related ligands, namely: [{RuCl(PhPNO)}2Cl] (4), [Ru(PhPNO)2] (5), [RuCl(PhPNXR)(PPh3)]BPh4 [X = O, R = Me (6); X = O, R = Ph (7); X = S, R = Me (8)], [{RuCl(PhPNX'R)}2Cl]X [X' = O, R = Me, X = Cl(-) (9); X' = S, R = Me, X = BPh4(-) or PF6(-) (10)], and [RuCl(PhPNO-eta 6C6H5)]BPh4 (11). The catalytic activity of these complexes with respect to the hydrosilyation of acetophenone and the hydrogenation of styrene has been investigated, giving an insight into the requirements for an active complex in these reactions.     

In situ generation of oxo-sulfidobis(dithiolene)tungsten(VI) complexes: active-site models for the aldehyde ferredoxin oxidoreductase family of tungsten enzymes

Oxo-sulfidobis(dithiolene)tungsten(VI) complexes were prepared in situ by the reaction of oxobis(dithiolene)tungsten(V) precursors with hydrosulfide (SH-). The complexes, characterized by UV-vis, electrospray ionization mass spectrometry, IR, and resonance Raman spectroscopies, model the proposed coordination environment and observed hydrolytic reactions of members of the aldehyde ferredoxin oxidoreductase family of tungsten enzymes.     

Syntheses and characterisation of new dioxouranium(VI) complexes with tridentate sulfur donor ligands

New dioxouranium(VI) complexes with the tridentate dibasic Schiff bases derived from salicylaldehyde, 5-chlorosalicylaldehyde, 5-bromosalicylaldehyde, 5-nitrosalicylaldehyde, 3,5-dichlorosalicylaldehyde, 4-methoxysalicylaldehyde, 5-methoxysalicylaldehyde, 3-ethoxysalicylaldehyde, 2-hydroxy-1-naphthaldehyde and 2-aminoethanethiol have been synthesised by the reaction of methanolic solution of dioxouranium(VI) acetate dihydrate and the Schiff base. The Schiff bases behave as ONS tridentate donor dibasic ligands. The complexes are of the type UO₂L · CH₃OH, where LH₂ = the tridentate, dibasic Schiff base. The complexes have been characterised on the basis of elemental analysis, infrared and electronic spectra, conductance, magnetic susceptibility and molecular weight measurements. The complexes are diamagnetic, monomers, and octahedral.     

Synthesis,characterization and theoretical investigations of new uranium (VI) and thorium (IV) complexes with 1-furfurylaldehyde-derived Schiff bases as ligands

The present work describes the synthesis and characterization of thorium (IV) and dioxouranium (VI) coordination compounds with three Schiff bases derived from 1-furfurylaldehyde. All coordination compounds were characterized by elemental analysis, ultraviolet–visible spectroscopy, Fourier transform infrared spectroscopy, fluorescence spectroscopy, and thermal analysis. The structural pattern, the geometry of the complexes and the coordination number of the metal ions were assigned on the basis of physico-chemical parameters, such as FTIR and UV–Vis spectra. The elemental analyses show a 1:1 stoichiometry for thorium coordinative compounds and 1:2 stoichiometry for uranyl ion, respectively. The obtained coordination compounds are stable in air, soluble in some organic solvents (DMF, acetonitrile, DMSO) and show fluorescent properties. The coordination compounds have high molar conductance that indicates their electrolytes nature. On the basis of the obtained experimental results, combined with theoretical studies, the structures of the compounds under study were proposed.     

Synthesis and structural characterization of cross-linked histidine-phenol Cu(ii) complexes as cytochrome c oxidase active site models

Tridentate cross-linked histidine-phenol Cu(ii) ether and ester complexes, chemical analogs of the active site of several heme-copper oxidases, have been synthesized and crystallized.     

Monodithiolene molybdenum(V, VI) complexes: a structural analogue of the oxidized active site of the sulfite oxidase enzyme family

The active sites of the xanthine oxidase and sulfite oxidase enzyme families contain one pterin-dithiolene cofactor ligand bound to a molybdenum atom. Consequently, monodithiolene molybdenum complexes have been sought by exploratory synthesis for structural and reactivity studies. Reaction of [MoO(S(2)C(2)Me(2))(2)](1-) or [MoO(bdt)(2)](1-) with PhSeCl results in removal of one dithiolate ligand and formation of [MoOCl(2)(S(2)C(2)Me(2))](1-) (1) or [MoOCl(2)(bdt)](1-) (2), which undergoes ligand substitution reactions to form other monodithiolene complexes [MoO(2-AdS)(2)(S(2)C(2)Me(2))](1-) (3), [MoO(SR)(2)(bdt)](1-) (R = 2-Ad (4), 2,4,6-Pr(i)(3)C(6)H(2) (5)), and [MoOCl(SC(6)H(2)-2,4,6-Pr(i)(3))(bdt)](1-) (6) (Ad = 2-adamantyl, bdt = benzene-1,2-dithiolate). These complexes have square pyramidal structures with apical oxo ligands, exhibit rhombic EPR spectra, and 3-5 are electrochemically reducible to Mo(IV)O species. Complexes 1-6 constitute the first examples of five-coordinate monodithiolene Mo(V)O complexes; 6 approaches the proposed structure of the high-pH form of sulfite oxidase. Treatment of [MoO(2)(OSiPh(3))(2)] with Li(2)(bdt) in THF affords [MoO(2)(OSiPh(3))(bdt)](1-) (8). Reaction of 8 with 2,4,6-Pr(i)(3)C(6)H(2)SH in acetonitrile gives [MoO(2)(SC(6)H(2)-2,4,6-Pr(i)(3))(bdt)](1-) (9, 55%). Complexes 8 and 9 are square pyramidal with apical and basal oxo ligands. With one dithiolene and one thiolate ligand of a square pyramidal Mo(VI)O(2)S(3) coordination unit, 9 closely resembles the oxidized sites in sulfite oxidase and assimilatory nitrate reductase as deduced from crystallography (sulfite oxidase) and Mo EXAFS. The complex is the first structural analogue of the active sites in fully oxidized members of the sulfite oxidase family. This work provides a starting point for the development of both structural and reactivity analogues of members of this family.     

Vanadium(IV) and -(V) complexes with O,N-chelating aminophenolate and pyridylalkoxide ligands

Two different monoanionic O,N-chelating ligand systems, i.e., [OC6H2(CH2NMe2)-2-Me2-4,6]- (1) and [OCMe2([2]-Py)]- (2), have been applied in the synthesis of vanadium(V) complexes. The tertiary amine functionality in 1 caused reduction of the vanadium nucleus to the 4+ oxidation state with either [VOCl3], [V(=NR)Cl3], or [V(=NR)(NEt2)3] (R = Ph, (3a, 5a), R = p-Tol (3b, 5b)), and applying 1 as a reducing agent resulted in the synthesis of the vanadium(IV) complexes [VO(OC6H2(CH2NMe2)-2-Me2-4,6)2] (4) and [V(=NPh)(OC6H2(CH2NMe2)-2-Me2-4,6)2] (6). In the case of [V(=N-p-Tol)(NEt2)(OC6H2(CH2NMe2)-2-Me2-4,6)2] (7b), the reduction was sufficiently slow to allow its characterization by 1H NMR and variable-temperature studies showed it to be a five-coordinate species in solution. Although the reaction of 1 with [V(=N-p-Tol)(O-i-Pr)3] (9b) did not result in reduction of the vanadium nucleus, vanadium(V) compounds could not be isolated. Mixtures of the vanadium(V) (mono)phenolate, [V(=N-p-Tol)(O-i-Pr)2(OC6H2(CH2NMe2)-2-Me2-4,6)] (10), and the vanadium(V) (bis)phenolate, [V(=N-p-Tol)(O-i-Pr)(OC6H2(CH2NMe2)-2-Me2-4,6)2] (11), were obtained. With the pyridylalkoxide 2, no reduction was observed and the vanadium(V) compounds [VOCl2(OCMe2([2]-Py))] (12) and [V(=N-p-Tol)Cl2(OCMe2([2]-Py)] (13) were obtained. 51V NMR showed 7b and 12 to be five-coordinate in solution, whereas for 10, 11, and 13 a coordination number of 6 was found. Compounds 12 and 13 showed decreased activity compared to their nonchelated vanadium(V) analogues when applied as catalysts in ethene polymerization. Two polymorphic forms with a difference in the V-N-C angle of 12.5 degrees have been found for 6. Crystal data: 6.Et2O, triclinic, P1, a = 11.1557(6) A, b = 12.5744(12) A, c = 13.1051(14) A, alpha = 64.244(8) degrees, beta = 70.472(7) degrees, gamma = 87.950(6) degrees, V = 1547(3) A3, Z = 2; 6.C6H6, triclinic, P1, a = 8.6034(3) A, b = 13.3614(4) A, c = 15.1044(5) A, alpha = 98.182(3) degrees, beta = 105.618(2) degrees, gamma = 107.130(2) degrees, V = 1551.00(10) A3, Z = 2; 12, orthorhombic, Pbca, a = 11.8576(12) A, b = 12.6710(13) A, c = 14.722(2) A, V = 2211.9(4) A3, Z = 8.