Cyclic and Lasso Peptides: Sequence Determination,Topology Analysis,and Rotaxane Formation

A broadly applicable chemical cleavage methodology to facilitate MS/MS sequencing was developed for macrocyclic and lasso peptides, which hold promise as exciting new therapeutics. Existing methods such as Edman degradation, CNBr cleavage, and enzymatic digestion are either limited in scope or completely fail in cleavage of constrained nonribosomal peptides. Importantly, the new method was utilized for synthesizing a unique peptide‐based rotaxane (both cyclic and threaded) from the lasso peptide, benenodin‐1 ΔC5.     

Efficient Synthesis of Cyclic Block Copolymers by Rotaxane Protocol by Linear/Cyclic Topology Transformation

High‐yielding synthesis of cyclic block copolymer (CBC) using the rotaxane protocol by linear‐cyclic polymer topology transformation was first demonstrated. Initial complexation of OH‐terminated sec‐ammonium salt and a crown ether was followed by the successive living ring‐opening polymerizations of two lactones to a linear block copolymer having a rotaxane structure by the final capping of the propagation end. CBC was obtained in a high yield by an exploitation of the mechanical linkage through the translational movement of the rotaxane component to transform polymer structure from linear to cyclic. Furthermore, the change of the polymer topology was translated into a macroscopic change in crystallinity of the block copolymer.     

Platinum Metallacycle-Based Molecular Recognition: Establishment and Application in Spontaneous Formation of a [2]Rotaxane with Light-Harvesting Property

Macrocyclic molecule-based host–guest systems, which provide contributions for the design and construction of functional supramolecular structures, have gained increasing attention in recent years. In particular, platinum(II) metallacycle-based host–guest systems provide opportunities for chemical scientists to prepare novel materials with various functions and structures due to the well-defined shapes and cavity sizes of platinum(II) metallacycles. However, the research on platinum(II) metallacycle-based host–guest systems has been given little attention. In this article, we demonstrate the host–guest complexation between a platinum(II) metallacycle and a polycyclic aromatic hydrocarbon molecule, naphthalene. Taking advantage of metallacycle-based host–guest interactions and the dynamic property of reversible Pt coordination bonds, a [2]rotaxane is efficiently prepared by employing a template-directed clipping procedure. The [2]rotaxane is further applied to the fabrication of an efficient light-harvesting system with multi-step energy transfer process. This work comprises an important supplement to macrocycle-based host–guest systems and demonstrates a strategy for efficient production of well-defined mechanically interlocked molecules with practical values.     

Formation of a Pillar[5]arene‐Based Two‐Dimensional Poly‐Pseudo‐Rotaxane: Threading and Crosslinking by the Same Guest Molecules

A one‐pot reaction of the A1/A2‐thiopyridyl pillar[5]arene L with silver(I) trifluoroacetate in the presence of the linear dinitrile guest C8 , [CN(CH₂)_nCN, n=8], afforded the first example of a two‐dimensional (2D) poly‐pseudo‐rotaxane {[(μ₄‐Ag)₂( C8 @ L )₂(μ ‐C8 )](CF₃CO₂)₂}_n. Surprisingly, in this structure the C8 guest not only threads into the pillar[5]arene unit but also crosslinks the 1D coordinative polymeric arrays. The formation of the 2D poly‐pseudo‐rotaxane is driven by an adaptive rearrangement of the components that minimizes the steric clashes not only between the threaded guests but also between the threaded and crosslinked guests where crosslinking occurs. A pathway for the formation of the 2D poly‐pseudo‐rotaxane is proposed.     

Synthesis of Biaryl-Bridged Cyclic Peptides via Catalytic Oxidative Cross-Coupling Reactions

Biaryl-bridged cyclic peptides comprise an intriguing class of structurally diverse natural products with significant biological activity. Especially noteworthy are the antibiotics arylomycin and its synthetic analogue G0775, which exhibits potent activity against Gram-negative bacteria. Herein, we present a simple, flexible, and reliable strategy based on activating-group-assisted catalytic oxidative coupling for assembling biaryl-bridged cyclic peptides from natural amino acids. The synthetic approach was utilized for preparing a number of natural and unnatural biaryl-bridged cyclic peptides, including arylomycin/G0775 and RP 66453 cyclic cores.     

The Astexin-1 Lasso Peptides: Biosynthesis,Stability, and Structural Studies

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CyClick Chemistry for the Synthesis of Cyclic Peptides

Here, we report a novel “CyClick” strategy for the macrocyclization of peptides that works in an exclusively intramolecular fashion thereby precluding the formation of dimers and oligomers via intermolecular reactions. The CyClick chemistry is highly chemoselective for the N‐terminus of the peptide with a C‐terminal aldehyde. In this protocol, the peptide conformation internally directs activation of the backbone amide bond and thereby facilitates formation of a stable 4‐imidazolidinone‐fused cyclic peptide with high diastereoselectivity (>99 %). This method is tolerant to a variety of peptide aldehydes and has been applied for the synthesis of 12‐ to 23‐membered rings with varying amino acid compositions in one pot under mild reaction conditions. The reaction generated peptide macrocycles featuring a 4‐imidazolidinone in their scaffolds, which acts as an endocyclic control element that promotes intramolecular hydrogen bonding and leads to macrocycles with conformationally rigid turn structures.     

A Guiding Principle for Strengthening Crosslinked Polymers: Synthesis and Application of Mobility‐Controlling Rotaxane Crosslinkers

Three component mobility controlling vinylic rotaxane crosslinkers with two radically polymerizable vinyl groups ( RC_R s) were synthesized to prove that the mobility of the components of the RC_R s plays a crucial role in determining the properties of rotaxane‐crosslinked polymers (RCPs). RC_R s (R=H, Me, or Et) were obtained from living ring‐opening polymerization. RCP_Et was prepared using RC_Et , which exhibits the lowest component mobility. The low component mobility is reflected in inferior mechanical strength and stretching ability in tensile stress tests compared to components with good (R=Me) and high (R=H) mobility. However, RCP_Et exhibited significantly higher stress and strain values than the corresponding covalently crosslinked polymers ( CCP_R s). These results indicate that a suitable component mobility substantially enhances the mechanical strength of RCPs. This behavior could serve as a guiding principle for the molecular design of advanced RCs.     

Generation of a Genetically Encoded,Photoactivatable Intein for the Controlled Production of Cyclic Peptides

Cyclic peptides are important natural products and hold great promise for the identification of new bioactive molecules. The split‐intein‐mediated SICLOPPS technology provides a generic access to fully genetically encoded head‐to‐tail cyclized peptides and large libraries thereof (SICLOPPS=split‐intein circular ligation of peptides and proteins). However, owing to the spontaneous protein splicing reaction, product formation occurs inside cells, making peptide isolation inconvenient and precluding traditional in vitro assays for inhibitor discovery. The design of a genetically encoded, light‐dependent intein using the photocaged tyrosine derivative ortho‐nitrobenzyltyrosine incorporated at an internal, non‐catalytic position is now reported. Stable intein precursors were purified from the E. coli expression host and subsequently subjected to light activation in vitro for both the regular protein splicing format and cyclic peptide production, including the natural product segetalin H as an example. The activity of the intein could also be triggered in living cells.     

六元和七元瓜环与两类端邻苯二甲酰亚胺基紫精轮烷的组装及性质

设计合成了2种不同碳链长度的客体分子1,1'-二甲基邻苯二甲酰亚胺基-4,4'-联吡啶溴化物 (G1)和1,1'-二丁基邻苯二甲酰亚胺基-4,4'-联吡啶溴化物(G2). 利用紫外-可见吸收光谱、 核磁共振波谱和等温滴定量热等方法研究了客体分子G1和G2与六元(Q[6])和七元瓜环(Q[7])的超分子自组装方式. 结果表明, 在加热回流情况下G1与Q[6]利用滑移法能与紫精基团包结形成[2]轮烷结构, 而Q[7]在常温下就能滑过封端基团邻苯二甲酰亚胺与紫精基团包结形成[2]准轮烷结构.