Characterization of electrode surface roughness and its impact on ion trap mass analysis

With the recent trend towards mass spectrometer miniaturization, the fabrication of mass analyzers and other ion optical components is being performed at scales where critical dimensions range from several millimeters to several micrometers. Depending on the sizes of the objects and the nature of the fabrication method used, electrode surface roughness can become non‐negligible and affect the analytical performance of the mass analyzer. In this work, a method of characterizing surface roughness is introduced through the concept of spatial roughness frequency. The roughness of a given surface is quantitatively described using spatial roughness components at a series of frequencies and with characteristic intensities. Based on this concept, an analytical method has been developed to describe the electromagnetic field inside an electrode assembly including consideration for the electrode roughness. The methodology is applied in simplified form to cylindrical and rectilinear ion trap analyzers. Four types of surface finishes were applied to ion trap electrodes of various sizes to illustrate the surface roughness effects on the high‐order fields and to compare the analytical performance of the ion traps. Application of this method to arrays of large numbers of micro‐scale ion traps has enabled the impact of fabrication methodology to be evaluated in terms of mass resolution for the ion trap arrays. Copyright © 2008 John Wiley & Sons, Ltd.     

小型离子阱的质量校正

各种野外环境的现场检测、现场诊断、流程监控、排放物检测与控制、突发事件的处理、尤其是化学和生物武器的检测等诸多需要现场使用质谱仪的场合都对质谱仪的小型化提出了迫切的要求。小型离子阱具有较高的灵敏度,可进行MS／MS实验,可利用离子-分子反应来识别特殊的化学基团,因而是小型质谱仪的重要质量分析器。本研究对小型离子阱的工作原理作了简要介绍,并以此为依据提出了进行小型离子阱质量校正的方法,推导了相关的公式,还成功地将其应用于自制的小型矩形离子阱质谱仪进行了质量校正,并指出该方法还可用于仪器RF等电学系统性能的检验。     

气相色谱矩形离子阱质谱联用仪的设计与性能

气相色谱离子阱质谱联用仪(GC-ITMS)广泛地应用于药物分析、环境分析、农药检测和食品分析、有机化学品分析、毒品分析以及医学和生物分析等领域。离子阱质谱作为色谱的检测器,决定了色质联用仪的分析性能,包括检出限、分辨率。离子阱质量分析器从传统的双曲型3D离子阱发展到2D线性离子阱,质量歧视效应得到了极大的改善,灵敏度得到了提高。矩形离子阱作为线性离子阱,结构简单,加工和装配容易,因此应用到GCMS系统中将具有非常大的优势。介绍了矩形离子阱质谱仪的设计方案、仪器整机的性能测试、质量分辨和质量歧视效应分析,与Agilent6890组成GCMS联用仪,对实际样品进行了分析。     

Observation of self-ion-molecule reactions during collisionally activated dissociation in an ion-trap mass spectrometer

This paper describes the formation of protonated molecules ([M + H]+) and adduct ions by self-ion-molecule reactions (SIMR) during collisionally activated decomposition (CAD) of methyne addition ions ([M + CH]+) produced from chemical ionization (CI) or SIMR in both an external and internal source ion-trap mass spectrometer (ITMS). The CAD results for the methyne addition ions of dopamine produced from both SIMR and dimethyl ether CI undertaken in the external and internal source ITMS were compared in order to prove the occurrence of SIMR during CAD processes. Compared with the external source ITMS, the internal source ITMS is much more easily applicable to this type of reaction owing to the large population of neutral analytes present in the trap.     

Modeling of a linear ion trap with driving rectangular waveforms

We consider the operation of a digital linear ion trap with resonant radial ejection. A sequence of rectangular voltage pulses with a dipole resonance signal is applied to the trap electrodes. The periodic waveform is piecewise constant, has zero mean, and is determined by an asymmetry parameter $d$: one value is taken on interval $\left(0,\mathit{dT}\right)$ and another on $\left(\mathit{dT},T\right)$, where $T$ is the RF period. Ion mass scanning is performed by varying the asymmetry parameter $d$ and amplitude of the negative pulse part with time. The ion oscillation frequencies and acceptance of the linear trap are calculated. The dependence of the ion mass to charge ratio $m/z$ on the parameter $d$ is $m/z~d^2$. The maximum value is about $m/z=30$ kDa for typical parameters of the linear trap: frequency 0.5 MHz, rod radius 4 mm, and negative pulse amplitude 1 kV. The dipolar excitation frequency is 0.125 MHz at which the LIT acceptance is maximal.     

仪器装置与实验技术小型矩形离子阱质谱仪的研制

研制的小型质谱仪以电子轰击源(EI)和矩形离子阱(RIT)质量分析器为核心部件,采用渗透阀控制的直接进样系统,高增益的电子倍增器用于离子检测,通过小信号放大系统对电子倍增器输出的弱电流再次放大,并输出电压信号,计算机上的NI数据采集卡和Labview操作软件对电压信号进行采集处理。由旋片机械泵和分子泵组成的真空系统可以形成10-5Pa的质谱工作环境。对研制的仪器进行了初步测试,得到了相应的质谱图,通过质量校正表明,结果令人满意。     

数字化矩形离子阱质谱仪的设计及性能

将数字化离子阱技术和矩形离子阱(RIT)技术相结合,建立了数字化矩形离子阱质谱仪.此技术和装置既具有数字化电源的结构简单、输出稳定和易精确控制等特点,又结合了矩形离子阱的高离子存储效率、结构简单以及加工和装配容易等优点.构建了基于电喷雾(ESI)电离源的数字化矩形离子阱质谱仪系统,并使用Fenfluramine和PPG2000分别对此系统的质量分辨率和质量范围进行了测试.研究结果表明:一个用印刷线路板(PCB)制作的简单矩形离子阱,在200 V(半峰值)的数字束缚电压的驱动下,获得了大于500的质量分辨率和超过2600 Th的质量范围.实验证明,数字化离子阱技术的应用可以显著提高矩形离子阱的性能,特别是质量范围等关键的质谱仪指标.     

Numerical observation of preferred directionality in ion ejection from stretched rectilinear ion traps

We report on numerical investigations of directionality of ion ejection in stretched rectilinear ion traps (RIT). Three 4-electrode trap geometries have been investigated. In all cases, one pair of electrodes has slits at their center and the other pair has no slits. The studied traps include the RIT-S, in which the mass analyzer electrodes are symmetrically positioned around the central axis; the RIT-X, in which the mass analyzer has a stretch in the direction of the electrodes which have slits (labeled as x-direction); and the RIT-Y, in which the mass analyzer has a stretch in the direction of the electrodes which have no slits (labeled as y-direction).Our analysis has been carried out on two-dimensional (2D) fields at the centre of an infinitely long mass analyzer. The boundary element method (BEM) has been used for field computations. The trajectory of ion motion has been generated using Runge Kutta fourth order integration.Three sets of simulations have been carried out on each of the RIT-S, the RIT-X and the RIT-Y to check for directionality of ion ejection. In the first, we numerically obtain the stability region on the potential (U_dc– V_rf) axes. In the second we generate an escape velocity plot with U_dc=0 for different values of V_rf. In the third, we simulate the mass selective boundary ejection experiment on a single ion.In the symmetric RIT-S, as expected, all three simulations show that there is an equal probability of ion reaching the trap boundary in either of the x- or y-directions. For the stretched traps, however, the results are dramatically different. For the RIT-X, all three simulations suggest that ion destabilization at the stability boundary occurs in the x-direction. Similarly, for the RIT-Y, ions preferentially get destabilized in the y-direction. That is, ions reaching the trap boundary overwhelmingly prefer the stretch direction.     

离子阱颗粒质谱研究进展

随着质谱技术的不断发展,对超高质量颗粒物质的分析已经成为质谱领域研究的一个重要方向.离子阱颗粒质谱(particle ion trap mass spectrometry)作为用于完整颗粒质量分析的有利工具,拓展了质谱技术在巨大颗粒物质量分析中的应用范围.本文对离子阱颗粒质谱仪器的研究进展及其在各个领域的应用进行了综述,并展望了离子阱颗粒质谱未来的发展趋势.     

Ion trap mass analysis at high pressure: an experimental characterization

In recent years, it has become increasingly interesting to understand the performance of mass spectrometers at pressures much higher than those employed with conventional operating conditions. This interest has been driven by several influences, including demand for the development of reduced‐power miniature mass spectrometers, desire for improved ion transfer into and through mass spectrometers, enhanced‐yield preparative mass separations, and mass filtering at the atmospheric pressure interface. In this study, an instrument was configured to allow for the performance characterization of a rectilinear ion trap (RIT) at pressures up to 50 mtorr with air used as the buffer gas. The mass analysis efficiency, mass resolution, isolation efficiency, and collision‐induced dissociation (CID) efficiency were evaluated at pressures ranging from 1 to 50 mtorr. The extent of degradation of mass resolution, isolation efficiency and ion stability as functions of pressure were characterized. Also, the optimal resonance ejection conditions were obtained at various pressures. Operations at 50 mtorr demonstrated improved CID efficiency in addition to peak widths of 2 and 5 m/z units (full width at half‐maximum, FWHM) for protonated caffeine (m/z 195) and Ultramark (m/z 1521) respectively. Copyright © 2009 John Wiley & Sons, Ltd.     

Strategies for generating peptide radical cations via ion/ion reactions

Several approaches for the generation of peptide radical cations using ion/ion reactions coupled with either collision induced dissociation (CID) or ultraviolet photo dissociation (UVPD) are described here. Ion/ion reactions are used to generate electrostatic or covalent complexes comprised of a peptide and a radical reagent. The radical site of the reagent can be generated multiple ways. Reagents containing a carbon–iodine (C―I) bond are subjected to UVPD with 266‐nm photons, which selectively cleaves the C―I bond homolytically. Alternatively, reagents containing azo functionalities are collisionally activated to yield radical sites on either side of the azo group. Both of these methods generate an initial radical site on the reagent, which then abstracts a hydrogen from the peptide while the peptide and reagent are held together by either electrostatic interactions or a covalent linkage. These methods are demonstrated via ion/ion reactions between the model peptide RARARAA (doubly protonated) and various distonic anionic radical reagents. The radical site abstracts a hydrogen atom from the peptide, while the charge site abstracts a proton. The net result is the conversion of a doubly protonated peptide to a peptide radical cation. The peptide radical cations have been fragmented via CID and the resulting product ion mass spectra are compared to the control CID spectrum of the singly protonated, even‐electron species. This work is then extended to bradykinin, a more broadly studied peptide, for comparison with other radical peptide generation methods. The work presented here provides novel methods for generating peptide radical cations in the gas phase through ion/ion reaction complexes that do not require modification of the peptide in solution or generation of non‐covalent complexes in the electrospray process. Copyright © 2015 John Wiley & Sons, Ltd.     

用离子阱经H2++H2碰撞反应碰撞反应制备H4+

用Penning型离子阱经碰撞反应H2++H2→H4+产生稳定的H4+。主要的反应产物是H3+,但十分明显地观测到H4+信号。H4+在阱中稳定存在时间长达0.1s量级。远比Kirchner等人测量的10-6s量级长。最后讨论了生成H4+的反应过程机制。     

Ion trap tandem mass spectrometric determination of F2-isoprostanes

A new tandem mass spectrometry (MS/MS) method based on the use of an ion trap mass spectrometer for the identification and quantitation of F(2)-isoprostanes has been developed. It consists of two solid-phase extractions and two derivation steps followed by gas chromatography/negative ion chemical ionization tandem mass spectrometry (GC/NICI-MS/MS) analysis. This method is highly selective and sensitive and it has been successfully applied to biological samples.     

用数字离子阱进行快速质量分析

利用数字离子阱技术进行样品的快速质量分析.在样品离子被引入离子阱的过程中,同时扫描数字射频工作电压的频率和离子共振偶极电压的频率,使得离子在进入离子阱质量分析器后,立即被相应的共振偶极电压所共振激发而逐出离子阱,并被离子探测器测量到.本方法相较于传统离子阱分析过程省去了离子引入、离子冷却和离子清空3个阶段,减少了约3/4的实验分析时间.通过对扫描速度、离子门电压参数的优化,数字束缚射频频率从1000～ 400 kHz线性扫描,扫描速度为2385 Th/s,离子门电压为9V,对利血平(m/z 609),精氨酸(m/z 174)等样品的进行测试,离子信号强度达到最优.结果表明,利用本方法可以获得与离子阱质量分析传统方法相同的质谱结果.     

Determination of organotins in water by micro liquid chromatography–electrospray/ion trap mass spectrometry

Due to the varying toxicity the species of organotins in their widespread applications, it is important for analytical methods to address their speciation. Traditional methods call for the hydrolysis and subsequent derivatization of the organotins before analysis. These methods can be time‐consuming, derivatization can be incomplete and high levels of background interference produce difficulties in identification and quantification. The use is described of a non‐derivatization and non‐hydrolysis micro‐liquid chromatography–electrospray/ion trap mass spectrometry for separation and detection of the organotins. Copyright © 1999 John Wiley & Sons, Ltd.     

Alkali and Alkaline Earth Metal Ions Complexes with a Partial Peptide of the Selectivity Filter in K+ Channels Studied by a Cold Ion Trap Infrared Spectroscopy

The infrared (IR) spectra of alkali and alkaline earth metal ion complexes with the Ac-Tyr-NHMe (GYG) peptide have been measured by laser photodissociation in a cold ion trap coupled with an electrospray mass spectrometer. The GYG peptide corresponds to a portion of the ion selectivity filter in the KcsA K⁺ channel that allows K⁺ to pass, but blocks Na⁺ even though it has a smaller ionic radius than K⁺. This current study extends a previous investigation on Na⁺ and K⁺ to the entire set of alkali metaI ions and alkaline earth dications. IR-IR hole-burning (IR² dip) spectroscopy has established the coexistence of several conformers of the GYG-metal ion complexes. The structures of the conformers were assigned by comparison between the isomer-selected IR spectra and theoretical IR spectra obtained from quantum chemical calculations. It was found that the structure of the dominant conformer correlates with the ability of the ion to permeate through the K⁺ channel.     

Gas-phase ion chemistry in the ternary silane-propyne-phosphine system

The gas-phase ion chemistry of propyne-phosphine and silane-propyne-phosphine mixtures was studied by ion trap mass spectrometry. For the binary mixture, the effect of different partial pressures of the reagents on the yield of C and P-containing ions was evaluated. Reaction sequences and rate constants were determined and reaction efficiencies were calculated from comparison of experimental and collisional rate constants. In the ternary silane-propyne-phosphine systems, the reaction pathways leading to formation of Si(m)C(n)P(p)H(q) (+) ions were determined and the rate constants of the most important steps were measured. For some ion species, selected by double isolation procedures (MS/MS), the low ion abundances prevented determination of the reaction rate constants. Si, C and P-containing ions are mainly produced in reactions of Si(m)P(p)H(q) (+) ions with propyne, while the reactivity of the Si(m)C(n)H(q) (+) ions towards PH(3) and of the C(n)P(p)H(q) (+) ions towards SiH(4) is very low. The formation of hydrogenated Si--C--P ions is interesting for their possible role as precursors of amorphous silicon carbides doped with phosphorus, obtained in a single step, by deposition from properly activated silane-propyne-phosphine mixtures.     

Gas-phase ion chemistry in the ternary SiH(4)-C(3)H(6)-PH(3) system

Propene-phosphine and the silane-propene-phosphine gaseous mixtures were studied by ion trap mass spectrometry. For the binary mixture the variation of ion abundances under different partial pressures and the mechanisms of ion-molecule reactions are reported. Moreover, the rate constants of the main processes were measured and compared with the collisional rate constants to determine the reaction efficiencies. In the ternary silane-propene-phosphine mixture the mechanisms of formation of Si(m)C(n)P(p)H(+)(s) ion clusters were elucidated, but the complexity of the system and the low abundances of the ions usually isolated by successive steps prevented the determination of rate constants. The hydrogenated ternary ions are mainly formed by reactions of Si(r)P(s)H(+)(t) ions with propene, whereas a minor contribution comes from reactions of Si(m)C(n)H(+)(p) ions with phosphine. The C(v)P(w)H(+)(z) ions show very low reactivity with silane. The formation processes of these species are discussed in relation to their possible role as precursors of amorphous silicon carbides doped with phosphorus obtained by deposition from properly activated silane-propene-phosphine mixtures.     

Gas-phase ion chemistry in XH4--C3H4--ZH3 (X==Si, Ge; Z==N, P) mixtures

The gas-phase ion chemistry of silane-allene-ammonia, germane-allene (or propyne)-ammonia (or phosphine) systems was studied by ion trap mass spectrometry. Reaction sequences were determined and rate constants were measured for the main processes observed. The mixture containing silane displays higher reactivity with respect to that with germane. Comparison with analogous systems provides useful information about the reactivity of different hydrocarbon molecules and the different affinities of silicon and germanium towards nitrogen and phosphorus. The most interesting product ions observed are those containing Si (or Ge), C and N (or P) elements together, as these ion species may be considered precursors of doped amorphous carbides, which are widely used in semiconductor devices.     

印刷线路板分压离子阱的离子单向出射性能研究

印刷线路板(Printed-Circuit-Board,PCB)分压离子阱是一种新型质量分析器,其突出优点在于内部电场可通过调节射频分压比进行优化.本实验在PCB分压离子阱离子出射方向的两组离散电极上配置了非对称的射频分压,以引入奇次阶场成分,使得射频电场的场中心(即离子运动中心)发生偏移,从而实现离子单向出射.通过数值计算软件SIMION和AXSIM分析了射频分压比差值与其内部电场分布的关系,并模拟离子运动轨迹,得到离子出射情况和模拟质谱峰.模拟结果表明,当两组离散电极的射频分压比差值为20％时,在合适的AC频率条件下,对于m/z=609 Th的离子,PCB分压离子阱的离子单向出射率可达90％以上,且质量分辨率大于2500.本研究可使PCB分压离子阱在基本不损失质量分辨率和使用单检测器模式下,大幅提高离子检测效率,因而在小型化质谱仪应用中具有显著优势.