A restudy of the crystal structure of tetraaquastrontium dicitratoborate trihydrate

The crystal structure of Sr(H₂O)₄[(C₁₂H₁₁O₁₄)B] · 3H₂O (I) has been restudied and determined with a higher accuracy. The crystals are monoclinic, space group P2₁/n, a = 11.405(1) Å, b = 18.814(1) Å, c = 11.987(1) Å, β = 110.79(1)°; Z = 4. The structure was refined by full matrix least-squares calculation to R = 0.0547 on 5343 unique reflections with R _int = 0.0419. The structural units of crystal I are the Sr²⁺ cation, seven water molecules, and doubly charged dicitratoborate anion, which is not equivalent to the singly charged complex dicitratoborate anion identified previously in the crystal structures of complexes of boric and citric acids. The coordination polyhedron of the Sr²⁺ cation is a distorted dodecahedron composed of four O atoms of coordinated water molecules and four O atoms of two complex anions. The crystal packing of I is layered. Thirteen independent O-H…O and O-H…, O′ contacts form an intricate system of hydrogen bonds.     

Structure of the 1:1 complex of dimethyl sulfoxide with hydroquinone: Supramolecular architecture based on D-H⋯A hydrogen bonds (D = O,C; A = O, π)

The hydroquinone-dimethyl sulfoxide-toluene system was investigated by thermal and X-ray diffraction analyses. The crystal structure of the 1:1 complex of hydroquinone with dimethyl sulfoxide was determined. Crystal data: C₈H₁₂O₃S, M = 188.24, triclinic system, space group P1¯, unit cell parameters: a = 7.4202(2) Å, b = 8.4046(3) Å, c = 8.7340(3) Å; α = 100.830(1)°, β = 99.794(1)°, γ = 114.129(1)°; V = 469.35(4) ų, Z = 2, d _calc = 1.332 g/cm³, R1 = 0.028, T = 100 K. The molecules are linked in a supramolecular assembly via D-H...A hydrogen bonds (D = O, C; A = O, π).     

Structural characterization of a mixed-ligand complex of copper(II) with 1,10-phenanthroline and the <Emphasis Type="Italic">m</Emphasis>-aminobenzoate ion

A new copper(II) complex of 1,10-phenanthroline (C1₂H₈N₂) and the meta-aminobenzoate ion (m-amb; C₇H₆NO ₂ ^? ), having the formula Cu(C₁₂H₈N₂)(C₇H₆NO₂)Cl?0.5H₂O, is prepared and characterized by elemental analysis, IR spectroscopy, and single crystal X-ray diffraction. The structure is built up from monomeric units in which the coordination environment around the metal ion is a square plane arising from a bidentate 1,10-phenanthroline molecule, a monodentate m-amb anion, and a chloride ion. A very long (Cu–N = 2.856(5) Å) bond to the nitrogen atom of an adjacent m-amb ion generates [101] polymeric chains in the crystal. The crystal structure is consolidated by N–H???O and O–H???O hydrogen bonds and C–H???O, C–H???Cl, and aromatic π–π stacking interactions. Crystal data: C₁₉H₁₅ClCuN₃O_2.5, M _r = 424.33, monoclinic, P2₁/n (No. 14), a = 9.8200(5) Å, b = 10.9291(7) Å, c = 16.3803(9) Å, β = 105.293(3)°, V = 1695.74(17) ų, Z = 4, R(F) = 0.043, wR(F ²) = 0.122.     

2-(diphenylphosphinylmethoxy)aniline: Synthesis,vibrational spectra,and crystal structure

The synthesis, vibrational spectra, and X-ray diffraction analysis results for 2-(diphenylphosphinylmethoxy) aniline, 2-[(C₆H₅)₂P(O)OCH₂]C₆H₄NH₂(I), are described. The crystals are monoclinic: a = 18.4515(17) Å, b = 10.5421(12) Å, c = 17.897(2) Å, β = 104.479(8)°, V = 3370.7(6) ų, Z = 8, space group P2₁/c, R = 0.0546 for 1770 reflections with I > 2σ(I). The unit cell contains two crystallographically independent molecules Ia and Ib joined by an N-H …O hydrogen bond between a hydrogen atom of the amino group of aniline in molecule Ia (Ib) and the phosphoryl oxygen atom of molecule Ib (Ia) (O…H 2.18 and 2.19 Å, N…O, 2.979(5) and 3.000(5) Å; NHO angle, 154° and 157°).     

Structure of arsenic 8-mercaptoquinolinate: Synthesis and crystal structure of arsenic 4-methoxy-8-mercaptoquinolinate As[C<Subscript>9</Subscript>H<Subscript>5</Subscript>(OCH<Subscript>3</Subscript>)NS]<Subscript>3</Subscript>

Arsenic 4-methoxy-8-mercaptoquinolinate As[C₉H₅(4-OCH₃)NS]₃ (I) was synthesized and studied by X-ray diffraction. Crystals are trigonal: space group R3, a = b = 13.9867(4) Å, c = 12.4991(5) Å, γ = 120°, V = 2117.58(12) ų, ρ = 1.519 g/cm³, Z = 3. An arsenic atom in the crystal structure occupies a special position on axis 3. The structural unit of the crystal (neutral complex I) has symmetry C3. 4-Methoxy-8-mercaptoquinoline acts as a bidentate (N,S-) ligand. The coordination polyhedron of the arsenic atom is a symmetric octahedron (3S + 3N) or, with allowance for the lone electron pair, ψ-one-capped octahedron (3S + 3N + E). Bond lengths are as follows: As-S, 2.3179(7)Å; As…N 2.688(3) Å. The geometries of coordination polyhedra of arsenic atoms are compared in the crystal structures of As(C₉H₆NS)₃, As[C₉H₅(2-CH₃)NS]₃, and As[C₉H₅(4-CH₃)NS]₃.     

The crystal structure of [Mg(H<Subscript>2</Subscript>O)<Subscript>6</Subscript>][VO(edta)] · 3.5H<Subscript>2</Subscript>O

The crystal structure of complex [Mg(H₂O)₆][VO(edta)] · 3.5H₂O (I) was determined by X-ray diffraction study. The crystals are monoclinic, a = 6.779 Å, b = 13.373(6) Å, c = 25.054 Å, β = 96.55°, Z = 4, space group P2₁. The unit cell contains two independent [VO(edta)]^2? anions, two independent [Mg(H₂O)₆]²⁺ cations, and seven crystal-water molecules. The coordination polyhedron of each vanadium atom is formed by five donor atoms of the edta ligand (2N + 3O) (V(1)-N(1), 2.278 Å; V(1)-N(2), 2.149 Å; V(2)-N(3), 2.301 Å; V(2)-N(4), 2.165 Å; V-O(acet), 2.00 ± 0.02 Å) and the oxygen atom of the oxo group (V-O, 1.60 ± 0.01 Å). The edta ligands and the vanadium atom form three glycinate rings: two R-type rings and one G-type ring (one acetate branch remains free), as well as an E-type ring with an asymmetric gauche configuration. The [Mg(H₂O)₆] cations are slightly distorted octahedra (Mg-O, 2.013–2.132 Å, the OMgO angles are 86.6°–94.2°). The H₂O molecules form a bifurcate system of H-bonds. The crystals of compound I belong to OD-type structures with an incomplete ordering of layers.     

Supramolecular architecture of catechol and its 2:1 complex with dimethylsulfoxide

The crystal structures of catechol (o-dihydroxybenzene) and its 2:1 complex with dimethylsulfoxide are determined at T = 150 K. Crystal data: C₁₄H₁₈O₅S, M = 298.37, triclinic, space group P \(\bar 1\), unit cell parameters: a = 7.7285(13) Å, b = 9.9924(17) Å, c = 10.3188(18) Å, α = 89.963(4)°, β = 89.968(4)°, γ = 69.076(5)°, V = 744.3(2)ų, Z = 2, D _x = 1.331 g/cm³, R1 = 0.048; C₆H₆O₂, M = 110.11, monoclinic, space group P2₁/n, a = 9.8206(6)Å, b = 5.5903(3)Å, c = 10.4439(6)Å, β = 114.952(2)°; V = 519.85(5) ų, Z = 4, D _x = 1.407 g/cm³, R1 = 0.0289. In the 2:1 complex the molecules are joined in a supramolecular ensemble by D-H...A hydrogen bonds (D = O, C; A = O, π); in catechol they are bonded only by O-H...O. The state diagram of the catechol-dimethylsulfoxide system is examined by DTA.     

Synthesis and structure investigation of Co(III) complex salts with the perrhenate anion

Complex salts of the composition [Co(NH₃)₆](ReO₄)₃·2H₂O (I), [Co(en)₃](ReO₄)₃ (II), [Co(NH₃)₅H₂O](ReO₄)₃·2H₂O (III), and [Co(NH₃)₅Cl](ReO₄)₂·0.5H₂O (IV) are obtained. Their crystal structures are determined by single crystal XRD. Crystallographic characteristics: (I) a = 9.9797(3) Å, b = 12.6994(3) Å, c = 14.7415(4) Å, β = 102.870(1)°, C2/c space group; (II) a = 8.0615(3) Å, b = 8.4483(4) Å c = 8.8267(4) Å, α = 61.923(2)°, β = 89.552(2)°, γ = 72.295(2)°, P1 space group; (III) a = 8.0086(4) Å, b = 12.9839(6) Å, c = 17.5122(7) Å, β=91.858(1)°, P2₁/n space group; (IV) a = 14.9446(3) Å, b = 14.6562(4) Å, c = 12.2434(4) Å, Cmc2₁ space group.     

Crystal structures of a family of layered coordination polymers containing divalent metal ions (Mn<Superscript>2+</Superscript>, Co<Superscript>2+</Superscript>, Ni<Superscript>2+</Superscript> and Zn<Superscript>2+</Superscript>) and the 3-amino 4-methyl benzoate ion

The syntheses and crystal structures of the layered coordination polymers M(C₈H₈NO₂)₂ [M = Mn (1), Co (2), Ni (3) and Zn (4)] are described. These isostructural compounds contain centrosymmetric trans-MN₂O₄ octahedra as parts of infinite sheets; the ligand bonds to three adjacent metal ions in μ³-N,O,O′ mode from both its carboxylate O atoms and its amine N atom. In each case, weak intra-sheet N–H?O and C–H?O hydrogen bonds may help to consolidate the structure. Crystal data: 1, C₁₆H₁₆MnN₂O₄, M _r = 355.25, monoclinic, P2₁/c (No. 14), a = 10.6534(2) Å, b = 4.3990(1) Å, c = 15.5733(5) Å, β = 95.1827(10)°, V = 726.85(3) ų, Z = 2, R(F) = 0.026, wR(F ²) = 0.067. 2, C₁₆H₁₆CoN₂O₄, M _r = 359.24, monoclinic, P2₁/c (No. 14), a = 10.6131(10) Å, b = 4.3374(4) Å, c = 15.3556(17) Å, β = 95.473(4)°, V = 703.65(12) ų, Z = 2, R(F) = 0.041, wR(F ²) = 0.091. 3, C₁₆H₁₆N₂NiO₄, M _r = 359.02, monoclinic, P2₁/c (No. 14), a = 10.6374(4) Å, b = 4.2964(2) Å, c = 15.2827(8) Å, β = 95.9744(14)°, V = 694.66(6) ų, Z = 2, R(F) = 0.028, wR(F ²) = 0.070. 4, C₁₆H₁₆N₂O₄Zn, M _r = 365.68, monoclinic, P2₁/c (No. 14), a = 10.6385(5) Å, b = 4.2967(3) Å, c = 15.2844(8) Å, β = 95.941(3)°, V = 694.89(7) ų, Z = 2, R(F) = 0.038, wR(F ²) = 0.107.     

Crystal structure of KAsUO<Subscript>6</Subscript>·<Subscript>3</Subscript>H<Subscript>2</Subscript>O at 100 and 293 K

The crystal structure of KAsUO₆·3H₂O was solved at 100 K and 293 K. KAsUO₆·3H₂O at T = 100 K: tetragonal, P4/ncc, a = 7.2037(6) Å, c = 17.811(2) Å; Z = 4, R1 = 0.0263, wR2 = 0.0546, for 618 independent reflections; at T = 293 K: tetragonal, P4/ncc, a = 7.1600(4) Å, c = 17.746(1) Å; Z = 4, R1 = 0.0263, wR2 = 0.0433 for 427 independent reflections. The results of X-ray analysis are compared with our previous data on heat capacity of this compound, and changes that take place in the structure at elevated temperature are considered.     

X-ray study of rhodium(III) sulfates

Compounds with compositions [Rh(H₂O)₆]₂(SO₄)₃·4H₂O (I), (H₃O)[Rh(H₂O)₆](SO₄)₂ (II), [Rh(H₂O)₅OH](SO₄)·0.5H₂O (III), and [Rh(H₂O)₆]₂(SO₄)·(H₂SO₄) _x ·5H₂O (IV) have been studied. The crystal structures of II, III, and IV were determined. All compounds crystallized in the monoclinic crystal system. Crystal data for II: a = 7.279(2) Å, b = 10.512(7) Å, c = 15.806(3) Å, β = 96.71(3)°, space group P2₁/n, Z = 2, d _calc = 2.334 g/cm³; III: a = 20.433(4) Å, b = 7.820(2) c = 11.215(2) Å, β = 114.14(1)°, space group C2/c, Z = 8, d _calc = 2.559 g/cm³; IV: a = 6.2250(4 Å), b = 27.0270(12) Å, c = 7.2674(5) Å, β = 97.04(3)°, space group P2₁/c, Z = 4, d _calc = 2.143 g/cm³. The compounds were studied by IR spectroscopy and powder X-ray diffraction. All of the isolated crystalline phases are sparingly soluble in ethanol and well soluble in water.     

X-ray structural study of fluorinated β-diketonate complexes of zirconium(IV)

Three novel complexes of zirconium(IV) are prepared and characterized by single crystal X-ray diffraction: zirconium(IV) pivaloyltrifluoroacetonate Zr(ptac)₄, zirconium(IV) trifluoroacetylacetonate Zr(tfac)₄, and zirconium(IV) hexafluoroacetylacetonate Zr(hfac)₄. Crystal data for C₃₂H₄₀F₁₂ZrO₈: a = 19.9842(6) Å, b = 11.8417(3) Å, c = 16.4831(5) Å; β = 95.2880(10)°, monoclinic, space group Cc, Z = 4, d _calc = 1.491 g/cm³, R = 0.061. Crystal data for C₂₀H₁₆F₁₂ZrO₈: a = 21.5063(15) Å, b = 7.9511(5) Å, c = 16.0510(10) Å; β = 113.736(4)°, monoclinic, space group C2/c, Z = 4, d _calc = 1.860 g/cm³, R = 0.047. Crystal data for C₂₀H₄F₂₄ZrO₈: a = 15.3533(13) Å, b = 20.2613(15) Å, c = 19.6984(17) Å; β = 95.828(2)°, monoclinic, space group P2₁/c, Z = 2, d _calc = 2.004 g/cm³, R = 0.078. All the structures are molecular and include isolated mononuclear Zr(β-dik)₄ complex molecules. Coordination environment of zirconium atom is made by eight oxygen atoms of four β-diketonates; the coordination polyhedron is an almost regular square antiprism. The Zr-O distances fall within 2.14–2.23 Å. Complexes in the structures are joined by van der Waals interactions. Using the structural data, the van der Waals energies of crystal lattices of the studied compounds are calculated by the atom-atom potential method.     

Crystal structure,luminescent and thermochromic properties of bis(tetraethylammonium) hexachlorotellurate(IV)

The crystal structure of (C₂H₅)₄N)₂TeCl₆ was determined by X-ray diffraction (a = 14.130(2) Å, b = 14.547(2)Å, c = 13.296(2)Å, β= 90.356(3)°; space group C2/c, Z = 4, ρ_(calcd) = 1.387 g/cm³). The crystal structure is composed of the [TeCl₆]^2? anions and tetraethylammonium cations ((C₂H₅)₄N)⁺. The electronic and geometric aspects that determine the spectral luminescence and thermochromic properties of the complex are discussed.     

Crystal structures of two one-dimensional coordination polymers constructed from Mn<Superscript>2+</Superscript> ions,chelating hexafluoro-acetylacetonate anions,and flexible bipyridyl bridging ligands

The syntheses and crystal structures of two one-dimensional coordination polymers, [Mn(C₅HO₂F₆)₂(C₁₆H₂₀N₂)] _n (1) and [Mn(C₅HO₂F₆)₂(C₂₀H₂₀N₂)] _n (2), are described, where C₅HO₂F₆ ^? is the hexafluoro acetylacetonate anion, C₁₆H₂₀N₂ is 1,6-bis(4-pyridyl)-hexane, and C₂₀H₂₀N₂ is 1,4-bis[2-(3-pyridyl)ethyl]-benzene. In both phases, the metal ion lies on a crystallographic twofold axis and is coordinated by two chelating C₅HO₂F₆ ^? anions and two bridging bipyridyl ligands to generate a cis-MnN₂O₄ octahedron. The bridging ligands, which are completed by crystallographic inversion symmetry in both compounds, connect the metal nodes into zigzag [20 1 ] chains in 1 and contorted [001] chains in 2. Intrachain C–H???O interactions occur in 1 but not in 2, which may be correlated with the relative orientations of the ligands. Crystal data: 1, C₂₆H₂₂F₁₂MnN₂O₄, M _r = 709.40, monoclinic, C2/c (No. 15), a = 9.3475(2) Å, b = 16.6547(3) Å, c = 18.3649(4) Å, β = 91.1135(8)°, V = 2858.50(10) ų, Z = 4, R(F) = 0.030, w R(F ²) = 0.075. 2, C₃₀H₂₂F₁₂MnN₂O₄, M _r = 757.44, monoclinic, C2/c (No. 15), a = 19.9198(2) Å, b = 10.6459(2) Å, c = 16.8185(3) Å, β = 119.8344(8)°, V = 3093.91(9) Å3, Z = 4, R(F) = 0.032, w R(F ²) = 0.078.     

Crystal structures of rhodium(III) aqua ion with tetrahedral anions

The crystal structures of compounds of the composition [Rh(H₂O)₆]₂(SO₄)₃·5H₂O (I) and [Rh(H₂O)₆]PO₄ (II) are determined. Crystallographic data for I: a = 7.272(9) Å, b = 27.047(1) Å, c = 12.464(9) Å, β = 97.038(10)°, P2₁ space group, Z = 4, d _x = 2.184 g/cm³; for II: a = 9.746(6)Å, b = 6.877(7) Å, c = 23.623(6) Å, β = 100.601(10)°, C2/c space group, Z = 8, d _x = 2.611 g/cm³. Compounds are analyzed by IR spectroscopy and powder XRD. Crystalline phase I is well soluble in water, whereas II is almost insoluble.     

Separate Crystallization of Lanthanide Oxalates and Calcium Oxalates from Nitric Acid Solutions

The separation of lanthanides from calcium compounds in the form of oxalates from hot nitric acid solutions of Ln(NO₃)₃ and Ca(NO₃)₂ with the insertion of oxalic acid and a Ln₂(C₂O₄)₃ · nH₂O crystal seed was studied by mass-spectrometric, atomic emission, microscopic, X-ray diffraction, and fluorescence analyses. The produced single-phase precipitate was found to contain an isomorphic impurity of La–Sm oxalates, while calcium oxalate remained in the hot nitric acid solution (95°С) saturated with oxalic acid. This facile and efficient method provides Ln₂(C₂O₄)₃ · nH₂O (n = 9.5 mol) in one step in a 80.1 rel. % yield, with the major phase being at least 99.4 wt %. The unit cell parameters were determined for the crystals of the isomorphic lanthanide oxalate mixture: a = 11.243(2) Å, b = 9.591(2) Å, c = 10.306(2) Å; α = γ = 90°, β = 114.12(1)°; Z = 2; V = 1013.7(5) ų.     

Structure of diisopropylammonium dicitratoborate and crystallochemical features of alkylammonium complexes with boric and citric acids

Single crystals of diisopropylammonium dicitratoborate of the formula (C₃H₇)₂NH₂[(C₆H₆O₇)₂B] (I) were prepared and characterized by X-ray diffraction. The crystals are monoclinic, space group C2/c, a = 15.9978(5) Å, b = 11.0805(4) Å, c = 13.1872(4) Å, α = 90°, β = 103.34(1)°, γ = 90°, Z = 8, V = 2274.5 (1) Å ³, Z = 8, ρ_calc = 1.440 g/cm³, 2237 reflections with I > 2σ(I); R1 = 0.0408. Structure I is built from complex spiran-type dicitratoborate anions and diisopropylammonium cations. In the crystal packing, the anions and the cations form staggered stacks linked by a system of hydrogen bonds involving three independent contacts O(N)-H...O. X-ray diffraction data for structure I were compared with those for complexes of boric and citric acids with ammonium and alkylammonium cations.     

Crystal and molecular structure of (±)-2-[(1<Emphasis Type="Italic">S</Emphasis>,3<Emphasis Type="Italic">S</Emphasis>)-3-acetyl-2,2-dimethylcyclobutyl]-N-(<Emphasis Type="Italic">p</Emphasis>-tolyl)acetamide

The structure of (±)-2-[(1S,3S)-3-acetyl-2,2-dimethylcyclobutyl]-N-(p-tolyl)acetamide has been determined by single crystal X-ray diffraction analysis. The crystal belongs to triclinic system, space group P-1, a = 8.8700(18) Å, b = 10.331(2) Å, c = 10.363(2) Å, α = 71.11(3)°, β = 65.06(3)°, γ = 72.18(3)°, V = 798.6(3) ų, Z = 2, formula unit C₁₇H₂₃NO₂. The title compound has a fragment of 2,2-dimethylcyclo-butane and its conformation represents semi-chair. The intermolecular hydrogen bonds N-H...O and C-H...O are revealed.     

Synthesis and crystal structure of a supramolecular adduct of the aqua nitrato complex of gadolinium [Gd(NO<Subscript>3</Subscript>)(H<Subscript>2</Subscript>O)<Subscript>7</Subscript>]<Superscript>2+</Superscript> with macrocyclic cavitand cucurbit[6]uril

A supramolecular adduct of gadolinium aqua nitrato complex and cucurbit[6]uril { [Gd(NO₃)(H₂O)₇](C₅H₅N)@(C₃₆H₃₆N₂₄O₁₂)}(NO₃)₂·10H₂O is obtained by slow diffusion of methanol into an aqueous solution containing gadolinium nitrate, pyridine, and cucurbit[6]uril. According to single crystal X-ray diffraction data, water molecules coordinated to metal atom make hydrogen bonds to polarized carbonyl groups of the macrocycle. The heptaaquanitratogadolinium(III) [Gd(NO₃)(H₂O)₇]²⁺ cation is structurally characterized for the first time. Crystal system is triclinic, space group \(P\overline 1 \), a = 12.3137(4) Å, b = 14.2334(5) Å, c = 19.5629(6) Å; α = 80.850(1)°, β = 86.879(1)°, γ = 68.855(1)°; V = 3157.15(18) ų, Z = 2. Oriented hydrogen-bonded chains of alternating cucurbit[6]uril molecules and gadolinium aqua cations form in the crystal structure.     

Molecular structure of 2-methoxy-4-pyrrolidinyl-6-trinitromethyl-1,3,5-triazine

An X-ray diffraction study of 2-methoxy-4-pyrrolidinyl-6-trinitromethyl-1,3,5-triazine was carried out. The crystals are triclinic; C₉H₁₁N₇O₇; M = 329.25; a = 8.536(1) Å, b = 9.378(2) Å, c = 9.7401(8) Å; α = 79.13(1)°, β = 73.974(8)°; γ = 72.76(1)°; V = 710.8(2) ų, d _c = 1.54 g/cm³, Z = 2, space group P1ˉ. The molecule on the whole is planar, except the pyrrolidine ring, which has a twist conformation. No significant π-π interactions and hydrogen bonds of C-H⋯N or C-H⋯O type were found in the crystal, and the molecule packing is stabilized only due to van der Waals interactions. Original Russian Text Copyright ? 2008 by V. V. Bakharev, A. A. Gidaspov, I. A. Litvinov, and E. V. Mironova __________ Translated from Zhurnal Strukturnoi Khimii, Vol. 49, No. 1, pp. 187–189, January–February, 2008.