Structural characterization of a pentacene monolayer on an amorphous SiO2 substrate with grazing incidence x-ray diffraction

Grazing incidence X-ray diffraction reveals that a pentacene monolayer, grown on an amorphous SiO2 substrate that is commonly used as a dielectric layer in organic thin film transistors (OTFTs), is crystalline. A preliminary energy-minimized model of the monolayer, based on the GIXD data, reveals that the pentacene molecules adopt a herringbone arrangement with their long axes tilted slightly from the substrate normal. Although this arrangement resembles the general packing features of the (001) layer in single crystals of bulk pentacene, the monolayer lattice parameters and crystal structure differ from those of the bulk. Because carrier transport in pentacene OTFTs is presumed to occur in the semiconductor layers near the dielectric interface, the discovery of a crystalline monolayer structure on amorphous SiO2 has important implications for transport in OTFTs.     

Conductance switching in an organic material: from bulk to monolayer

Fluorescein sodium, which does not exhibit electrical bistability in thin films, can be switched to a high conducting state by the introduction of carbon nanotubes as channels for carrier transport. Thin films based on fluorescein sodium/carbon nanotubes display memory switching phenomenon among a low conducting state and several high conducting states. Read-only and random-access memory applications between the states resulted in multilevel memory in these systems. Results in thin films and in a monolayer (deposited via layer-by-layer assembly) show that instead of different molecular conformers, multilevel conducting states arise from the different density of high conducting fluorescein molecules.     

Raman study on pentacene:C60 bulk heterojunction films

We measured 785 nm excited Raman and infrared spectra of pentacene-d₁₄. The observed spectra were assigned on the basis of the Raman and infrared spectra calculated by the density functional theory (DFT) method at the B3LYP/6⬜311 + G** level. We measured 785 nm excited Raman spectrum of a pentacne-d₁₄:C₆₀ bulk heterojunction film. The spectrum was assigned on the basis of the wavenumber shifts upon deuteration of pentacene. The assignments of the 1462 and 493 cm^↙1 A_g bands of C₆₀ were confirmed. The 511, 453, and 256 cm^↙1 bands, which were observed only in pentacene:C₆₀ bulk heterojunction films, did not show large deuteration shifts. This result indicates that the 511, 453, and 256 cm^↙1 bands are attributed to activation of the silent modes of C₆₀ due to symmetry lowering_.     

Optical second-harmonic generation from a monolayer of centrosymmetric molecules adsorbed on silver

An increase in the optical second-harmonic signal arising from an electrochemically treated silver surface upon adsorption of a monolayer of the centrosymmetric molecule pyrazine is reported and an effective second-order non-linear polariz-ability for the adsorbed species deduced. These investigations illustrate the potential of second-harmonic generation in the elucidation of interfaces.     

Molecular orientation of evaporated pentacene films on gold: alignment effect of self-assembled monolayer

Pentacene films deposited on self-assembled monolayers (SAMs) bearing different terminal functional groups have been studied by reflection-absorption IR, grazing angle XRD, NEXAFS, AFM, and SEM analyses. A film with pentacene molecules nearly perpendicularly oriented was observed on Au surfaces covered with an SAM of alkanethiol derivative of X-(CH2)(n)-SH, with X = -CH(3), -COOH, -OH, -CN, -NH(2), C(60), or an aromatic thiol p-terphenylmethanethiol. On the other hand, a film with the pentacene molecular plane nearly parallel to the substrate surface was found on bare Au surface. A similar molecular orientation was found in thinner ( approximately 5 nm) and thicker (100 nm) deposited films. Films deposited on different surfaces exhibit distinct morphologies: with apparently smaller and rod-shaped grains on clean bare Au surface but larger and islandlike crystals on SAM-modified surfaces. X-ray photoemission electron microscopy (X-PEEM) was used to analyze the orientation of pentacene molecules deposited on a SAM-patterned Au surface. With the micro-NEXAFS spectra and PEEM image analysis, the microarea-selective orientation control on Au was characterized. The ability to control the packing orientation in organic molecular crystals is of great interest in fabricating organic field effect transistors because of the anisotropic nature of charge transport in organic semiconducting materials.     

Surface-directed molecular assembly of pentacene on monolayer graphene for high-performance organic transistors

Organic electronic devices that use graphene electrodes have received considerable attention because graphene is regarded as an ideal candidate electrode material. Transfer and lithographic processes during fabrication of patterned graphene electrodes typically leave polymer residues on the graphene surfaces. However, the impact of these residues on the organic semiconductor growth mechanism on graphene surface has not been reported yet. Here, we demonstrate that polymer residues remaining on graphene surfaces induce a stand-up orientation of pentacene, thereby controlling pentacene growth such that the molecular assembly is optimal for charge transport. Thus, pentacene field-effect transistors (FETs) using source/drain monolayer graphene electrodes with polymer residues show a high field-effect mobility of 1.2 cm(2)/V s. In contrast, epitaxial growth of pentacene having molecular assembly of lying-down structure is facilitated by π-π interaction between pentacene and the clean graphene electrode without polymer residues, which adversely affects lateral charge transport at the interface between electrode and channel. Our studies provide that the obtained high field-effect mobility in pentacene FETs using monolayer graphene electrodes arises from the extrinsic effects of polymer residues as well as the intrinsic characteristics of the highly conductive, ultrathin two-dimensional monolayer graphene electrodes.     

Molecular dynamics simulations of liquid crystal molecules on a polyimide monolayer

Preliminary results are presented on the molecular dynamics simulations of alignment of the liquid crystal molecule, 4-n-octyl-4'-cyanobiphenyl (8CB), on a polyimide (pyromelltic dianhydride-p-phenylene diamine) oligomer monolayer. We actually simulated a three-layer system, i.e., liquid crystal molecule/polyimide oligomer/a basal plane of graphite. First, simulations of the oligomers adsorbed on graphite were done in order to obtain reasonable adsorption structures, as the pre-stage simulation of the three-layer system. Then, by placing a liquid crystal layer on top, the three-layer system was simulated. The stable liquid crystal alignment direction on the polyimide monolayer was found roughly to be the polyimide chain direction with zero pretilt in this combination of liquid crystal and polymer materials. The calculated adsorption energy of an 8CB molecule to the polyimide monolayer was 128 kJ mol^-1 and the carbonyl group of the polyimide was the main adsorption site.     

Real-time monitoring of nanomolar binding to a cyclodextrin monolayer immobilized on a Si/SiO2/novolac surface using white light reflectance spectroscopy: the case of triclosan

The monitoring of the antibacterial agent triclosan binding at nanomolar concentration from an aqueous solution by employing a well-packed monolayer with a predetermined single orientation made of specifically synthesized 2,3-dimethyl-6-(undec-10-enamide)-6-deoxy-β-cyclodextrin (DMBUA) on a silicon wafer (Si/SiO(2)) coated with a novolac resin is reported. A white light reflectance spectroscopy (WLRS) setup was used for the real-time monitoring of the DMBUA deposition and triclosan binding processes. Film thicknesses obtained by WLRS were in very good agreement with the ones measured by X-ray reflectivity (XRR) experiments. Triclosan binds strongly to the DMBUA monolayer (logK(assoc)=6.68). NMR studies in aqueous solution indicated that the chlorophenolyl ring rather than the dichlorophenyl ring is preferentially inserted into DMBUA cups. The current detecting system that requires no tedious surface chemistry, no thiolated cyclodextrins, no gold surfaces, and no expensive equipment may be useful in capturing small molecules and may permit various applications, e.g., preparation of antimicrobial surfaces.     

Exploring the electronic structure of elemental lithium: from small molecules to nanoclusters, bulk metal, and surfaces

Clusters of lithium atoms ranging in size from Li4 to Li40 and bulk metallic solids, including surfaces, are investigated through first principles electronic structure calculations, which are based upon density functional theory and the electron localization function (ELF). It is found that large lithium ppi-type contributions in the electronic wavefunction cause the electrons to localize in interstitial regions, which leads to multicenter bonding for both the clusters and the solids, including their surfaces. For the smaller clusters these stabilizing ppi interactions also lead to short Li-Li interatomic distances, which in conjunction with the longer bonds induces "distance alternation" in the range from 2.45 A to 3.15 A. This consequence of the additional ppi interactions is absent in simple solids due to symmetry. The electronic structure of the clusters is topologically insensitive to deformations that do not affect their general shape, but changes significantly upon isomerization. The ramifications upon dynamic properties is that the clusters are quasi-rigid at low temperatures and retain their shape though the distance alternation pattern is suppressed. The picture which emerges for bonding in the bulk solid is that the metallic state arises from the presence of a large number of partially occupied multicenter bonds. For nanoscale clusters only the surface of these clusters exhibits strong localization, whereas their interiors display localization properties similar to the bulk metallic solid. On the other hand, localized states similar to those of the clusters ("dangling bonds") are found on the (001) surface of body-centered cubic (bcc) and face-centered cubic (fcc) lithium solids.     

Synthesis of a conducting SiO2-carbon composite from commercial silicone grease and its conversion to paramagnetic SiO2 particles

The thermal decomposition of commercial silicone grease was carried out in a closed reactor (Swagelok) that was heated at 800 degrees C for 3 h, yielding a SiO2-carbon composite with a BET surface area of 369 m2/g. The bulk conductivity (5.72 x 10(-6) S x cm(-2)) of the SiO2-carbon composite was determined by impedance measurements. The as-prepared SiO2-carbon composite was further annealed at 500 degrees C in air for 2 h, which led to the formation of white paramagnetic silica particles (confirmed by ESR), possessing a surface area of 111 m2/g. The present synthetic technique requires unsophisticated equipment and a low-cost commercial precursor, and the reaction is carried out without a solvent, surfactant, or catalyst. The mechanism for the formation of a porous SiO2-carbon composite from the silicone grease is also presented.     

Active media based on SiO2 matrices with incorporated molecules of rhodamine dyes

SiO₂ matrices with incorporated molecules of Rhodamine 6G and Rhodamine 800 laser dyes were synthesized by the sol?Cgel method. The spectral properties of the matrices were studied. It was found that the incorporation of Rhodamine 6G molecules into the xerogel network decreased their association. The influence of the molar ratio of water and formamide on the transparency of the samples was studied. Laser emission of SiO₂ matrices activated with Rhodamine 800 was obtained in the near infrared spectral range. The values of laser spectrum halfwidth of SiO₂ matrices with Rhodamine 6G and Rhodamine 800 are 2?C6?nm. A well-defined structure of the laser emission spectra of the matrices at microsecond pumping duration testifies to their relatively high optical quality.     

A molecular simulation study of an organosilane self-assembled monolayer/SiO2 substrate interface

The bonding network of an alkylsilane self-assembled monolayer (SAM)SiO(2) substrate interface is investigated by means of canonical Monte Carlo (MC) simulations. SAMSiO(2) systems with different interfacial bonding topologies are sampled by the Metropolis MC method, and the AMBER potential with a newly developed organosilicon parameters are used to obtain an optimized structure with a given bonding topology. The underlying substrates are modeled as hydroxy-terminated (100) or (111) cristobalites. The SAMSiO(2) interface is characterized by a polysiloxane bonding network which comprises anchoring bonds and cross-linking bonds, namely, molecule-substrate and molecule-molecule Si-O-Si bonds, respectively. We show that at thermal equilibrium, the ratio of the number of anchoring bonds to cross-linking bonds decreases as a total Si-O-Si bond density increases, and that nevertheless, number of anchoring bonds always dominate over that of cross-linking bonds. Moreover we show that the total Si-O-Si bond density strongly affects the lateral ordering of the alkylsilane molecules, and that increase in the Si-O-Si bond density disorders the molecular packing. Our results imply that a lab-to-lab variation in the experimentally prepared SAMs can be attributed to different Si-O-Si bond densities at the SAMSiO(2) interface.     

Chiral pair monolayer adsorption of iodine-substituted octadecanol molecules on graphite

High-resolution scanning tunneling microscopy has been used to examine the adsorbate structures formed when a racemic mixture of (9R,10R)-9,10-diiodooctadecan-1-ol and (9S,10S)-9,10-diiodooctadecan-1-ol is adsorbed at the basal plane of highly ordered pyrolytic graphite. The herringbone structure characteristic of the adsorption of long-chain molecules on graphite is observed. Close examination of the micrographs indicates a unique structure in which the chiral molecules adsorb in pairs, with one enantiomer filling half of the unit cell, and the other enantiomer filling the other half. Instead of forming separate chiral domains, as is sometimes observed when a racemic mixture adsorbs on an achiral surface, chiral pairs are formed and the pairs form an ordered monolayer, exposing opposite faces of the same molecule. An achiral racemic mixture is observed to form a chiral structure on an achiral surface in the regions of the surface examined here.     

Water at surfaces and interfaces: From molecules to ice and bulk liquid

The structure and growth of water films on surfaces is reviewed, starting from single molecules to two-dimensional wetting layers, and liquid interfaces. This progression follows the increase in temperature and vapor pressure from a few degrees Kelvin in ultra-high vacuum, where Scanning Tunneling and Atomic Force Microscopies (STM and AFM) provide crystallographic information at the molecular level, to ambient conditions where surface sensitive spectroscopic techniques provide electronic structure information. We show how single molecules bind to metal and non-metal surfaces, their diffusion and aggregation. We examine how water molecules can be manipulated by the STM tip via excitation of vibrational and electronic modes, which trigger molecular diffusion and dissociation. We review also the adsorption and structure of water on non-metal substrates including mica, alkali halides, and others under ambient humid conditions. We finally discuss recent progress in the exploration of the molecular level structure of solid-liquid interfaces, which impact our fundamental understanding of corrosion and electrochemical processes.     

Enantioselective crystal growth of leucine on a self-assembled monolayer with covalently attached leucine molecules

Enantioselective crystal growth of leucine occurs on a solid surface modified with a self-assembled monolayer depending on the chirality of the enantiomer attached, as evidenced by the X-ray diffraction method.     

Tunnelling electron transfer from bulk electron centers of magnesium oxide to adsorbed molecules of nitrous oxide

Tunneling electron transfer from bulk F⁺-centers of MgO to molecules of N₂O adsorbed on MgO surface has been detected and studied.

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F⁺- N₂O, .