Synthesis and characterization of some new 4,4′‐(1,4‐phenylene)dipyrimidine and 6,6′‐(1,4‐phenylene)‐di(pyridin‐2(1H)‐one) derivatives

A series of new 4,4′‐(1,4‐phenylene)dipyrimidines 5a–c, 8a–c , and 10a,b have been synthesized from the reaction of amidines 1a–c with the dienaminone 2 , bis‐chalcone 6 , or ylidenemalono‐ nitrile 9 . The reaction of malononitrile and ethyl cyanoacetate with 2 gave 6,6′‐(1,4‐phenylene)di(pyridin‐2(1H)‐ones) ( 15a,b ). The structures of the products were proved by elemental analyses, IR, MS, ¹H, and ¹³C NMR spectroscopy. © 2005 Wiley Periodicals, Inc. Heteroatom Chem 16:507–512, 2005; Published online in Wiley InterScience ( www.interscience.wiley.com ). DOI 10.1002/hc.20150     

Synthesis of new 3,3′‐(1,4‐phenylene)bis(1,5‐diones) derivatives

Several 3,3′‐(1,4‐phenylene)bis(1,5‐diones) and their chalcone precursors have been prepared in good to excellent yield via aldol addition and Michael addition starting from 3‐acetyl‐2,5‐dimethylfuran or 3‐acetyl‐2,5‐dimethyl‐thiophene with terephthalaldehyde in the presence of appropriate base NaOH or lithium diisopropylamide. The kind and amount of alkali played a critical role in improving the reaction rates and yields of the products. J. Heterocyclic Chem., (2011).     

Helical supramolecular assembly of N2,N2′‐bis[3‐(morpholin‐4‐yl)propyl]‐N1,N1′‐(1,2‐phenylene)dioxalamide dimethyl sulfoxide monosolvate

In the title compound, C₂₄H₃₆N₆O₆·C₂H₆OS, the carbonyl groups are in an antiperiplanar conformation, with O=C—C=O torsion angles of 178.59 (15) and −172.08 (16)°. An intramolecular hydrogen‐bonding pattern is depicted by four N—H...O interactions, which form two adjacent S(5)S(5) motifs, and an N—H...N interaction, which forms an S(6) ring motif. Intermolecular N—H...O hydrogen bonding and C—H...O soft interactions allow the formation of a meso‐helix. The title compound is the first example of a helical 1,2‐phenylenedioxalamide. The oxalamide traps one molecule of dimethyl sulfoxide through N—H...O hydrogen bonding. C—H...O soft interactions give rise to the two‐dimensional structure.     

2,2′‐(1,2‐Ethanediyldithio)bis(1,3‐benzothiazole)

In the title compound, C₁₆H₁₂N₂S₄, which is the result of the S‐alkyl­ation reaction of 2‐mercapto­benzo­thia­zole with ethyl­ene dibromide, the planes of the two benzo­thia­zole moieties form a dihedral angle of 3.84 (14)°. The bridging chain moiety, –SCH₂CH₂S–, adopts an antiperiplanar conformation. There are intermolecular S⃛S non‐bonded contacts of 3.6471 (9) Å, which stabilize the crystal packing.     

Nucleophilic addition to 3‐methyl‐1‐(4‐nitrophenyl)‐2‐phenyl‐4,5‐dihydroimidazolium iodide

Reactions of the 1,2‐diaryl 4,5‐dihydroimidazolium, represented by 3‐methyl‐1‐(4‐nitrophenyl)‐2‐phenyl‐4,5‐dihydroimidazolium iodide 1 , with ethylenediamine afforded a benzylidyne unit transferred product, 2‐phenyl‐2‐imidazoline 2 ; a ring‐opened adduct 4 was produced when excess ethylenediamine was used. Reactions of 1 with hydroxylamine, malononitrile, and nitromethane anions produced ring‐opened products, 5 , 7 , and 8 respectively.     

Bis[μ3‐cis‐N‐(2‐aminopropyl)‐N′‐(2‐carboxylatophenyl)oxamidato(3–)]bis(2,2′‐bipyridine)dichloridotetracopper(II) dihydrate

The title complex, bis[μ₃‐cis‐N‐(2‐aminopropyl)‐N′‐(2‐carboxylatophenyl)oxamidato(3−)]‐1:2:4κ⁷N,N′,N′′,O:O′,O′′:O′′′;2:3:4κ⁷O′′′:N,N′,N′′,O:O′,O′′‐bis(2,2′‐bipyridine)‐2κ²N,N′;4κ²N,N′‐dichlorido‐1κCl,3κCl‐tetracopper(II) dihydrate, [Cu₄(C₁₂H₁₂N₃O₄)₂Cl₂(C₁₀H₈N₂)₂]·2H₂O, consists of a neutral cyclic tetracopper(II) system having an embedded centre of inversion and two solvent water molecules. The coordination of each Cu^II atom is square‐pyramidal. The separations of Cu^II atoms bridged by cis‐N‐(2‐aminopropyl)‐N′‐(2‐carboxylatophenyl)oxamidate(3−) and carboxyl groups are 5.2096 (4) and 5.1961 (5) Å, respectively. A three‐dimensional supramolecular structure involving hydrogen bonding and aromatic stacking is observed.     

A new two‐dimensional managnese(II) coordination polymer constructed by 2,2′‐(1,2‐phenylene)bis(1H‐imidazole‐4,5‐dicarboxylate)

In recent years, N‐heterocyclic carboxylate ligands have attracted much interest in the preparation of new coordination polymers since they contain N‐atom donors, as well as O‐atom donors, and have a rich variety of coordination modes which can lead to polymers with intriguing structures and interesting properties. A new two‐dimensional coordination polymer, namely poly[[μ₃‐2,2′‐(1,2‐phenylene)bis(4‐carboxy‐1H‐imidazole‐5‐carboxylato)‐κ⁶O⁴,N³,N^3′,O^4′:O⁵:O^5′]manganese(II)], [Mn(C₁₆H₈N₄O₈)]_n or [Mn(H₄Phbidc)]_n, has been synthesized by the reaction of Mn(OAc)₂·4H₂O (OAc is acetate) with 2,2′‐(1,2‐phenylene)bis(1H‐imidazole‐4,5‐dicarboxylic acid) (H₆Phbidc) under solvothermal conditions. In the polymer, each Mn^II ion is six‐coordinated by two N atoms from one H₄Phbidc²⁻ ligand and by four O atoms from three H₄Phbidc²⁻ ligands, forming a significantly distorted octahedral MnN₂O₄ coordination geometry. The Mn^II ions are linked by hexadentate H₄Phbidc²⁻ ligands, leading to a two‐dimensional structure parallel to the ac plane. In the crystal, adjacent layers are further connected by N—H…O hydrogen bonds, forming a three‐dimensional structure in the solid state.     

The search for formal electrostatic effects on molecular conformation and crystal packing: crystal structure of 2,2′′‐disubstituted (H versus PPh2) 1,1′‐(1,2‐phenylene)bis(3‐methyl‐1H‐imidazol‐3‐ium) bis(trifluoromethanesulfonate)

Electrostatic interactions between localized integral charges make the stability and structure of highly charged small and rigid organics intriguing. Can σ/π‐electron delocalization compensate reduced conformational freedom by lowering the repulsion between identical charges? The crystal structure of the title salt, C₁₄H₁₆N₄²⁺·2CF₃SO₃⁻, (2), is described and compared with that of the 2,2′′‐bis(diphenylphosphanyl) derivative, (4). The conformations of the dications and their interactions with neighbouring trifluoromethanesulfonate anions are first analyzed from the standpoint of formal electrostatic effects. Neither cation exhibits any geometrical strain induced by the intrinsic repulsion between the positive charges. In contrast, the relative orientation of the imidazolium rings [i.e. anti for (2) and syn for (4)] is controlled by different configurations of the interactions with the closest trifluoromethanesulfonate anions. The long‐range arrangement is also found to be specific: beyond the formal electrostatic packing, C—H…O and C—H…F contacts have no definite `hydrogen‐bond' character but allow the delineation of layers, which are either pleated or flat in the packing of (2) or (4), respectively.     

A new one‐dimensional CdII coordination polymer incorporating 2,2′‐(1,2‐phenylene)bis(1H‐imidazole‐4,5‐dicarboxylate)

Imidazole‐4,5‐dicarboxylic acid (H₃IDC) and its derivatives are widely used in the preparation of new coordination polymers owing to their versatile bridging coordination modes and potential hydrogen‐bonding donors and acceptors. A new one‐dimensional coordination polymer, namely catena‐poly[[diaquacadmium(II)]‐μ₃‐2,2′‐(1,2‐phenylene)bis(1H‐imidazole‐4,5‐dicarboxylato)], [Cd(C₁₆H₆N₄O₈)_0.5(H₂O)₂]_n or [Cd(H₂Phbidc)_1/2(H₂O)₂]_n, has been synthesized by the reaction of Cd(OAc)₂·2H₂O (OAc is acetate) with 2,2′‐(1,2‐phenylene)bis(1H‐imidazole‐4,5‐dicarboxylic acid) (H₆Phbidc) under solvothermal conditions. In the polymer, one type of Cd ion (Cd1) is six‐coordinated by two N atoms and two O atoms from one H₂Phbidc⁴⁻ ligand and by two O atoms from two water molecules, forming a significantly distorted octahedral CdN₂O₄ coordination geometry. In contrast, the other type of Cd ion (Cd2) is six‐coordinated by two N atoms and two O atoms from two symmetry‐related H₂Phbidc⁴⁻ ligands and by two O atoms from two symmetry‐related water molecules, leading to a more regular octahedral coordination geometry. The Cd1 and Cd2 ions are linked by H₂Phbidc⁴⁻ ligands into a one‐dimensional chain which runs parallel to the b axis. In the crystal, the one‐dimensional chains are connected through hydrogen bonds, generating a two‐dimensional layered structure parallel to the ab plane. Adjacent layers are further linked by hydrogen bonds, forming a three‐dimensional structure in the solid state.     

Two mononuclear Tc complexes: [2,2′‐(3‐phenylpropylimino)‐ and [2,2′‐(propylimino)bis(ethanethiolato)](4‐methoxybenzenethiolato)oxidotechnate(V)

The molecular structures of the two mononuclear title complexes, namely (4‐methoxybenzenethiolato‐κS)oxido[2,2′‐(3‐phenylpropylimino)bis(ethanethiolato)‐κ³S,N,S′]technetium(V), [Tc(C₁₄H₂₁NS₂)(C₇H₇OS)O], (I), and (4‐methoxybenzenethiolato‐κS)oxido[2,2′‐(propylimino)bis(ethanethiolato)‐κ³S,N,S′]technetium(V), [Tc(C₇H₁₅NS₂)(C₇H₇OS)O], (II), exhibit the same coordination environment for the central Tc atoms. The atoms are five‐coordinated (TcNOS₃) with a square‐pyramidal geometry comprising a tridentate 2,2′‐(3‐phenylpropylimino)bis(ethanethiolate) or 2,2′‐(propylimino)bis(ethanethiolate) ligand, a 4‐methoxybenzenethiolate ligand and an additional oxide O atom. Intermolecular C—H...O and C—H...S hydrogen bonds between the monomeric units result in two‐dimensional layers with a parallel arrangement.     

Influence of 1,4‐dioxane solvent inclusion on the crystal structure of 5,5′‐diphenyl‐2,2′‐(p‐phenylene)di‐1,3‐oxazole (POPOP)

Crystallization of 5,5′‐diphenyl‐2,2′‐(p‐phenylene)di‐1,3‐oxazole (POPOP), C₂₄H₁₆N₂O₂, from chloroform or 1,4‐dioxane yielded crystals in pure and solvated forms, respectively. The solvated crystals of POPOP were found to contain 1,4‐dioxane in a strict 1:2 compound–solvent stoichiometry, C₂₄H₁₆N₂O₂·C₄H₈O₂, thus being a defined solvent‐inclusion compound. The crystal system is monoclinic in both cases and the asymmetric unit of the cell contains only half of the molecule (plus one dioxane molecule in the case of the solvated structure), owing to the centrosymmetry of the di‐1,3‐oxazole molecule.     

(R)‐(6,6′‐Dihydroxybiphenyl‐2,2′‐diyl)bis(diphenylphosphine oxide) methanol solvate

The title compound, C₃₆H₂₈O₄P₂·CH₄O, was synthesized directly from the methoxy analogue. The crystal structure shows that one OH group interacts with an O atom of a phosphine oxide group in an adjacent mol­ecule, while the other OH group complexes with the methanol solvent molecule via intermolecular hydrogen bonds. An O atom of one phosphine oxide group interacts with the hydroxy H atom of methanol via a hydrogen bond. There are intra‐ and intermolecular π–π interactions between the phenyl rings. All these interactions result in the formation of supramolecular chiral parallelogram channels via self‐assembly.     

2,2′‐Bipyridinium bis(perchlorate)

The title compound, [H₂bipy](ClO₄)₂ or C₁₀H₁₀N₂²⁺·2ClO₄^?, was obtained at the interface between an organic (2,2′‐bi­pyridine in methanol) and an aqueous phase (perchloric acid in water). The compound crystallizes in space group P and comprises discrete diprotonated trans‐bipyridinium cations, [H₂bipy]²⁺, and ClO₄^? anions. The cations and anions are connected through N—H?O and C—H?O hydrogen bonds [distances N?O 2.817 (4) and 2.852 (4) Å, and C?O 3.225 (6)–3.412 (5)Å]. The C—C bond distance between the two rings is 1.452 (5) Å. The bipyridinium cation has a trans conformation and the N—C—C—N torsion angle is 152.0 (3)°.     

Synthesis of 2,2′‐(p‐phenylene)bisbenzazoles compounds from terephthalohydroxamoyl chloride

In this study, synthesis of symmetric compounds of 2,2′‐(p‐phenylene)bisbenzothiazole, 2,2′‐(p‐phenyl‐ene)bisbenzimidazole and 5,5′‐dimethyl‐2,2′‐(p‐phenylene)bisbenzoxazole were benefited from the reaction of terephthalohydroxamoyl chloride with 2‐amino‐4‐methyl phenol, o‐aminothio phenol and o‐phenylenedi‐amin compounds. The structures of these compounds were confirmed by elemental analysis, mass, ¹H‐NMR and FT‐IR techniques.     

Bis[S‐6‐(2,2:6′,2′′‐terpyridin‐4′‐yloxy)hexyl thioacetate]manganese(II) bis(hexafluorophosphate)

The structure of a manganese(II) complex of terpyridine functionalized with acetylsulfanyl‐terminated hexyloxy chains, [Mn(C₂₃H₂₅N₃O₂S)₂](PF₆)₂, is described. This type of complex is of interest in the study of single‐molecule transport properties in open‐shell systems. The manganese coordination environment is distorted octahedral but, importantly, with no larger deviations from the idealized geometry than those observed for other metal–terpyridine complexes. The Mn—N bond lengths range from 2.192 (2) to 2.272 (3) Å. The title compound crystallizes with the cation and anions all on general positions, with the hexafluorophosphate anions exhibiting orientational disorder. When compared with other bis‐terpyridine complexes, this structure demonstrates that manganese(II) is no more prone to undergo low‐symmetry distortions than systems with ligand field stabilization energy contributions.     

Dimethyl 2,2′‐bipyridine‐6,6′‐dicarboxylate and bis(dimethyl 2,2′‐bipyridine‐6,6′‐dicarboxylato‐κ2N,N′)copper(I) tetrafluoroborate

The single‐crystal X‐ray structures of dimethyl 2,2′‐bipyridine‐6,6′‐dicarboxylate, C₁₄H₁₂N₂O₄, and the copper(I) coordination complex bis(dimethyl 2,2′‐bipyridine‐6,6′‐dicarboxylato‐κ²N,N′)copper(I) tetrafluoroborate, [Cu(C₁₄H₁₂N₂O₄)₂]BF₄, are reported. The uncoordinated ligand crystallizes across an inversion centre and adopts the anticipated anti pyridyl arrangement with coplanar pyridyl rings. In contrast, upon coordination of copper(I), the ligand adopts an arrangement of pyridyl donors facilitating chelating metal coordination and an increased inter‐pyridyl twisting within each ligand. The distortion of each ligand contrasts with comparable copper(I) complexes of unfunctionalized 2,2′‐bipyridine.     

Cobalt(II) and cobalt(III) complexes with 4′‐(4‐cyanophenyl)‐2,2′:6′,2′′‐terpyridine

4′‐Cyanophenyl‐2,2′:6′,2′′‐terpyridine (cptpy) was employed as an N,N′,N′′‐tridentate ligand to synthesize the compounds bis[4′‐(4‐cyanophenyl)‐2,2′:6′,2′′‐terpyridine]cobalt(II) bis(tetrafluoridoborate) nitromethane solvate, [Co^II(C₂₂H₁₄N₄)₂](BF₄)₂·CH₃NO₂, (I), and bis[4′‐(4‐cyanophenyl)‐2,2′:6′,2′′‐terpyridine]cobalt(III) tris(tetrafluoridoborate) nitromethane sesquisolvate, [Co^III(C₂₂H₁₄N₄)₂](BF₄)₃·1.5CH₃NO₂, (II). In both complexes, the cobalt ions occupy a distorted octahedral geometry with two cptpy ligands in a meridional configuration. A greater distortion from octahedral geometry is observed in (I), which indicates a different steric consequence of the constrained ligand bite on the Co^II and Co^III ions. The crystal structure of (I) features an interlocked sheet motif, which differs from the one‐dimensional chain packing style present in (II). The lower dimensionality in (II) can be explained by the disturbance caused by the larger number of anions and solvent molecules involved in the crystal structure of (II). All atoms in (I) are on general positions, and the F atoms of one BF₄⁻ anion are disordered. In (II), one B atom is on an inversion center, necessitating disorder of the four attached F atoms, another B atom is on a twofold axis with ordered F atoms, and the C and N atoms of one nitromethane solvent molecule are on a twofold axis, causing disorder of the methyl H atoms. This relatively uncommon study of analogous Co^II and Co^III complexes provides a better understanding of the effects of different oxidation states on coordination geometry and crystal packing.     

2,2′‐(Iminodimethylene)bis(1H‐benzimidazolium)(1+) chloride

The title compound, C₁₆H₁₆N₅⁺·Cl⁻ (nbbH⁺·Cl⁻), displays N—H⋯N, N—H⋯Cl and π–π inter­actions in the crystal packing. The Cl⁻ anion is chelated by the nbbH⁺ cation via two N—H⋯Cl hydrogen bonds. Inter‐ion N—H⋯N and N—H⋯Cl hydrogen bonds link ions related by 2₁ screw axes into chains along the c axis. These chains are further linked by glide‐plane operations to generate a three‐dimensional network, which is additionally stabilized by inter­chain π–π inter­actions.     

Supramolecular interactions in a copper(II) 4′‐(4‐bromophenyl)‐2,2′:6′,2′′‐terpyridine complex

The title compound, [4′‐(4‐bromophenyl)‐2,2′:6′,2′′‐terpyridine]chlorido(trifluoromethanesulfonato)copper(II), [Cu(CF₃O₃S)Cl(C₂₁H₁₄BrN₃)], is a new copper complex containing a polypyridyl‐based ligand. The Cu^II centre is five‐coordinated in a square‐pyramidal manner by one substituted 2,2′:6′,2′′‐terpyridine ligand, one chloride ligand and a coordinated trifluoromethanesulfonate anion. The Cu—N bond lengths differ by 0.1 Å for the peripheral and central pyridine rings [2.032 (2) (mean) and 1.9345 (15) Å, respectively]. The presence of the trifluoromethanesulfonate anion coordinated to the metal centre allows Br...F halogen–halogen interactions, giving rise to the formation of a dimer about an inversion centre. This work also demonstrates that the rigidity of the ligand allows the formation of other types of nonclassical interactions (C—H...Cl and C—H...O), yielding a three‐dimensional network.     

1,1′‐Di(hydrazinocarbonylmethyl)‐2,2′‐biimidazole monohydrate and 1,1′‐di[2‐(hydrazinocarbonyl)ethyl]‐2,2′‐bi­imidazole

The crystal structures of the title compounds, alternatively called 2,2′‐(2,2′‐bi­imid­azole‐1,1′‐diyl)­diaceto­hydra­zide monohydrate, C₁₀H₁₄N₈O₂·H₂O, (I), and 3,3′‐(2,2′‐bi­imid­azole‐1,1′‐diyl)­dipropion­o­hydra­zide, C₁₂H₁₈N₈O₂, (II), respectively, have been determined. The mol­ecules consist of half‐mol­ecule asymmetric units related by a twofold rotation in (I) and by a center of inversion in (II). The imidazole rings of both mol­ecules crystallize in a nearly coplanar fashion [dihedral angles of 5.91 (3) and 0.0 (1)° for (I) and (II), respectively]. Both planar hy­dra­zinocarbonylalkyl substituents are essentially planar and assume the E orientation.