Synthesis and Structures of β‐Diketoiminate Complexes of Magnesium

The reaction of the β‐diketoiminate lithium complex (dipp)NacNacLi · OEt₂ ((dipp)NacNac = 2‐((2,6‐diisopropylphenyl)amino)‐4‐((2,6‐diisopropylphenyl)imino)‐pent‐2‐enyl) with iPrMgCl and MgI₂ yield the corresponding (dipp)NacNacMgiPr · OEt₂ ( 1 ) and (dipp)NacNacMgI · OEt₂ ( 2 ). The reaction of 2 with NaBH₄ in diethylether gives (dipp)NacNacMg(μ‐H)₃BH · OEt₂ ( 3 ). The core element of compounds 1 – 3 is a six‐membered ring formed by N(1)–C(1)–C(2)–C(3)–N(2) and magnesium. The structures of 1 and 2 show the β‐diketoiminate backbone in a boat‐conformation with the tetrahedrally coordinated metal center at the prow and the opposing carbon atom at the stern. The magnesium atom in 3 is octahedrally coordinated and out of the β‐diketoiminate plane.     

Hydrogen bonding in 2‐amino‐4,6‐dimethoxypyrimidine, 2‐benzylamino‐4,6‐bis(benzyloxy)pyrimidine and 2‐amino‐4,6‐bis(N‐pyrrolidino)pyrimidine: chains of fused rings and a centrosymmetric dimer

Molecules of 2‐amino‐4,6‐di­methoxy­pyrimidine, C₆H₉N₃O₂, (I), are linked by two N—H?N hydrogen bonds [H?N 2.23 and 2.50 Å, N?N 3.106 (2) and 3.261 (2) Å, and N—H?N 171 and 145°] into a chain of fused rings, where alternate rings are generated by centres of inversion and twofold rotation axes. Adjacent chains are linked by aromatic π–π‐stacking interactions to form a three‐dimensional framework. In 2‐­benzylamino‐4,6‐bis(benzyloxy)pyrimidine, C₂₅H₂₃N₃O₂, (II), the mol­ecules are linked into centrosymmetric R(8) dimers by paired N—H?N hydrogen bonds [H?N 2.13 Å, N?N 2.997 (2) Å and N—H?N 170°]. Molecules of 2‐amino‐4,6‐bis(N‐pyrrolidino)­pyrimidine, C₁₂H₁₉N₅, (III), are linked by two N—H?N hydrogen bonds [H?N 2.34 and 2.38 Å, N?N 3.186 (2) and 3.254 (2) Å, and N—H?N 163 and 170°] into a chain of fused rings similar to that in (I).     

2‐Iodo‐N‐(3‐nitrobenzyl)aniline and 3‐iodo‐N‐(3‐nitrobenzyl)aniline exhibit entirely different patterns of supramolecular aggregation

In 2‐iodo‐N‐(3‐nitro­benzyl)­aniline, C₁₃H₁₁IN₂O₂, the mol­ecules are linked into a three‐dimensional structure by a combination of C—H?O hydrogen bonds, iodo–nitro interactions and aromatic π–π‐stacking interactions, but N—H?O and C—H?π(arene) hydrogen bonds are absent. In the isomeric 3‐iodo‐N‐(3‐nitro­benzyl)­aniline, a two‐dimensional array is generated by a combination of N—H?O, C—H?O and C—H?π(arene) hydrogen bonds, but iodo–nitro interactions and aromatic π–π‐stacking interactions are both absent.     

A Solvent Switch for the Stabilization of Multiple Hemiacetals on an Inorganic Platform: Role of Supramolecular Interactions

Reaction of Zn(OAc)₂ ? 2 H₂O with 2,6‐diisopropylphenyl phosphate (dippH₂) in the presence of pyridine‐4‐carboxaldehyde (Py‐4‐CHO) in methanol resulted in the isolation of a tetrameric zinc phosphate cluster [Zn(dipp)(Py‐4‐CH(OH)(OMe))]₄ ? 4 MeOH ( 1 ) with four hemiacetal moieties stabilized on the double‐4‐ring inorganic cubane cluster. The change of solvent from methanol to acetonitrile leads to the formation of [Zn(dipp)(Py‐4‐CHO)]₄ ( 2 ), in which the coordinated Py‐4‐CHO retains its aldehydic form. Dissolution of 1 in CD₃CN readily converts it to the aldehydic form and yields 2 . Similarly 2 , which exists in the aldehyde form in CD₃CN, readily converts to the hemiacetal form in CD₃OD/CH₃OH. Compound 1 is an unprecedented example in which four hemiacetals have been stabilized on a single molecule in the solid state retaining its stability in solution as revealed by its ¹H NMR spectrum in CD₃OD. The solution stability of 1 and 2 has further been confirmed by ESI‐MS studies. To generalize the stabilization of multiple hemiacetals on a single double‐four‐ring platform, pyridine‐2‐carboxaldehyde (Py‐2‐CHO) was used as the auxiliary ligand in the reaction between zinc acetate and dippH₂, leading to isolation of [Zn(dipp)(Py‐2‐CH(OH)(OMe))]₄ ( 3 ). Understandably, recrystallization of 3 from acetonitrile yields the parent aldehydic form, [Zn(dipp)(Py‐2‐CHO)]₄ ( 4 ). Single‐crystal X‐ray diffraction studies reveal that supramolecular bonding, aided by hydrogen‐bonding interactions involving the hemiacetal functionalities (C?OH, C?OMe, and C?H), are responsible for the observed stabilization. The hemiacetal/aldehyde groups in 1 and 2 readily react with p‐toluidine, 2,6‐dimethylaniline, and 4‐bromoaniline to yield the corresponding tetra‐Schiff base ligands, [Zn(dipp)(L)]₄ (L=4‐methyl‐N‐(pyridin‐4‐ylmethylidene)aniline ( 5 ), 2,6‐dimethyl‐N‐(pyridin‐4‐ylmethylene)‐aniline ( 6 ), and 4‐bromo‐N‐(pyridin‐4‐ylmethylene)aniline ( 7 )). Isolation of 5 – 7 opens up further possibilities of using 1 and 2 as new supramolecular synthons and ligands.     

Hydro­gen bonding in substituted nitro­anilines: isolated nets in 1,3‐­diamino‐4‐nitrobenzene and continuously interwoven nets in 3,5‐­dinitro­aniline

Molecules of 1,3‐diamino‐4‐nitrobenzene, C₆H₇N₃O₂, are linked by N—H?O hydrogen bonds [N?O 2.964 (2) and 3.021 (2) Å; N—H?O 155 and 149°] into (4,4) nets. In 3,5‐di­nitro­aniline, C₆H₅N₃O₄, where Z′ = 2, the mol­ecules are linked by three N—H?O hydrogen bonds [N?O 3.344 (2)–3.433 (2) Å and N—H?O 150–167°] into deeply puckered nets, each of which is interwoven with its two immediate neighbours.     

Phthal­imide at 120 K: perforated molecular ribbons containing three different ring motifs

Molecules of phthal­imide [1H‐iso­indole‐1,3(2H)‐dione], C₈H₅NO₂, are linked by N—H?O hydrogen bonds [H?O 2.02 Å, N?O 2.8781 (16) Å and N—H?O 167°] and by C—H?O hydrogen bonds [H?O 2.54 and 2.56 Å, C?O 3.3874 (18) and 3.4628 (19) Å, and C—H?O 149 and 159°] into molecular ribbons, which are pierced by three different ring motifs; there are two centrosymmetric R(8) rings, each containing a single hydrogen bond, N—H?O in one case and C—H?O in the other, and R(9) rings containing all three hydrogen bonds.     

Solid‐State Form Screen of Cardiosulfa and Its Analogues

Cardiosulfa is a biologically active sulfonamide molecule that was recently shown to induce abnormal heart development in zebrafish embryos through activation of the aryl hydrocarbon receptor (AhR). The present report is a systematic study of solid‐state forms of cardiosulfa and its biologically active analogues that belong to the N‐(9‐ethyl‐9H‐carbazol‐3‐yl)benzene sulfonamide skeleton. Cardiosulfa (molecule 1 ; R¹=NO₂, R²=H, R³=CF₃), molecule 2 (H, H, CF₃), molecule 3 (CF₃, H, H), molecule 4 (NO₂, H, H), molecule 5 (H, CF₃, H), and molecule 6 (H, H, H) were synthesized and subjected to a polymorph search and solid‐state form characterization by X‐ray diffraction, differential scanning calorimetry (DSC), variable‐temperature powder X‐ray diffraction (VT‐PXRD), FTIR, and solid‐state (ss) NMR spectroscopy. Molecule 1 was obtained in a single‐crystalline modification that is sustained by N? H???π and C? H???O interactions but devoid of strong intermolecular N? H???O hydrogen bonds. Molecule 2 displayed a N? H???O catemer C(4) chain in form I, whereas a second polymorph was characterized by PXRD. The dimorphs of molecule 3 contain N? H???π and C? H???O interactions but no N? H???O bonds. Molecule 4 is trimorphic with N? H???O catemer in form I, and N? H???π and C? H???O interactions in form II, and a third polymorph was characterized by PXRD. Both polymorphs of molecule 5 contain the N? H???O catemer C(4) chain, whereas the sulfonamide N? H???O dimer synthon R₂²(8) was observed in polymorphs of 6 . Differences in the strong and weak hydrogen‐bond motifs were correlated with the substituent groups, and the solubility and dissolution rates were correlated with the conformation in the crystal structure of 1 , 2 , 3 , 4 , 5 , 6 . Higher solubility compounds, such as 2 (10.5 mg mL^?1) and 5 (4.4 mg mL^?1), adopt a twisted confirmation, whereas less‐soluble 1 (0.9 mg mL^?1) is nearly planar. This study provides practical guides for functional‐group modification of drug lead compounds for solubility optimization.     

Hydrogen bonding in C‐substituted nitroanilines: sheets built from alternating R(12) and R(36) rings in 2‐bromo‐6‐cyano‐4‐nitroaniline

Molecules of the title compound (systematic name: 2‐amino‐3‐bromo‐5‐nitro­benzo­nitrile), C₇H₄BrN₃O₂, are linked by N—H?N and N—H?O hydrogen bonds [H?N 2.19 Å, N?N 3.019 (4) Å and N—H?N 157°, and H?O 2.17 Å, N?O 2.854 (3) Å and N—H?O 134°] to form (10) sheets built from alternating R(12) and R(36) rings, both of which are centrosymmetric.     

Hydrogen‐bonded bilayers in ­piperazinium(2+) bis(mandelate) bis(methanol) solvate

In the title compound, C₄H₁₂N₂²⁺·2C₈H₇O₃^?·2CH₄O, the cations lie across centres of inversion and are disordered over two orientations with equal occupancy; there are equal numbers of (R)‐ and (S)‐mandelate anions present (mandelate is α‐hydroxy­benzene­acetate). The anions and the neutral water mol­ecules are linked by O—H?O hydrogen bonds [O?O 2.658 (3) and 2.682 (3) Å, and O—H?O 176 and 166°] into deeply folded zigzag chains. Each orientation of the cation forms two symmetry‐related two‐centre N—H?O hydrogen bonds [N?O 2.588 (4) and 2.678 (4) Å, and N—H?O 177 and 171°] and two asymmetric, but planar, three‐centre N—H?(O)₂ hydrogen bonds [N?O 2.686 (4)–3.137 (4) Å and N—H?O 137–147°], and by means of these the cations link the anion/water chains into bilayers.     

N‐Propionylhydroxylamine forms a three‐dimensional hydrogen‐bonded framework structure

The title compound, N‐hydroxy­propan­amide, C₃H₇NO₂, crystallizes with Z′ = 3 in P2₁/c. The mol­ecules are linked by three N—H?O hydrogen bonds [N?O 2.8012 (16) to 2.8958 (15) Å; N—H?O 163 to 168°] and by three O—H?O hydrogen bonds [O?O 2.6589 (15) to 2.6775 (17) Å; O—H?O 165 to 177°] into a single three‐dimensional framework.     

A Series of Isolable Silanoic Thio‐, Seleno‐, and Telluroesters (LSi(X)OR) with Donor‐Supported SiX Double Bonds (L=β‐Diketiminate; X=S,Se, Te)

The first silicon analogues of carbonic (carboxylic) esters, the silanoic thio‐, seleno‐, and tellurosilylesters 3 (Si?S), 4 (Si?Se), and 5 (Si?Te), were prepared and isolated in crystalline form in high yield. These thermally robust compounds are easily accessible by direct reaction of the stable siloxysilylene L(Si:)OSi(H)L′ 2 (L=HC(CMe)₂[N(aryl)₂], L′=CH[(C?CH₂)‐CMe][N(aryl)]₂; aryl=2,6‐iPr₂C₆H₃) with the respective elemental chalcogen. The novel compounds were fully characterized by methods including multinuclear NMR spectroscopy and single‐crystal X‐ray diffraction analysis. Owing to intramolecular N→Si donor–acceptor support of the Si?X moieties (X=S, Se, Te), these compounds have a classical valence‐bond N⁺–Si–X^? resonance betaine structure. At the same time, they also display a relatively strong nonclassical Si?X π‐bonding interaction between the chalcogen lone‐pair electrons (n_π donor orbitals) and two antibonding Si? N orbitals (σ*_π acceptor orbitals mainly located at silicon), which was shown by IR and UV/Vis spectroscopy. Accordingly, the Si?X bonds in the chalcogenoesters are 7.4 ( 3 ), 6.7 ( 4 ), and 6.9 % ( 5 ) shorter than the corresponding Si? X single bonds and, thus, only a little longer than those in electronically less disturbed Si?X systems (“heavier” ketones).     

Two‐component molecular crystals composed of chloronitrobenzoic acids and 4‐aminopyridine

The crystal structures of the four isomeric organic salts 4‐amino­pyridinium 2‐chloro‐4‐nitro­benzoate, (I), 4‐amino­pyridinium 2‐chloro‐5‐nitro­benzoate, (II), 4‐amino­pyridinium 5‐chloro‐2‐nitro­benzoate, (III), and 4‐amino­pyridinium 4‐chloro‐2‐nitro­benzoate, (IV), all C₅H₇N₂⁺·C₇H₃ClNO₄^?, are presented. Compound (I) has one intramolecular hydrogen bond, one intermolecular C—H?O hydrogen bond and π–π‐stacking interactions. Compound (II) has N—H?O, C—H?O and C—H?Cl hydrogen bonds, and Cl?O—C electrostatic interactions. Compound (III) has N—H?O and C—H?O hydrogen bonds. Compound (IV) has a π–π‐stacking interaction, but no C—H?O hydrogen bonds.     

4‐Vinyl­benzyl analogs of adenine and uracil: reactive monomers for nucleobase polymeric resins

The crystal structures of 9‐(4‐vinyl­benzyl)­adenine, C₁₄H₁₃N₅, and 1‐(4‐vinyl­benzyl)­uracil, C₁₃H₁₂N₂O₂, are composed of zigzag ribbon‐like structures that are stabilized by conventional (N—H?N‐type) hydrogen bonds for the former and conventional (N—H?O‐type) and non‐conventional (C—H?O‐type) hydrogen bonds for the latter; the hydrogen‐bonding patterns are represented by graph‐sets R(9) and R(8), respectively. The adenine and uracil moieties in these alkyl­ated derivatives are planar and are inclined at angles of 84.44 (4) and 79.07 (7)°, respectively, with respect to the phenyl rings.     

The Existence of Tricyanomethane

Calcium tricyanomethanide reacts with hydrogen fluoride under formation of tricyanomethane and Ca(HF₂)₂. Tricyanomethane is stable below ?40 °C and was characterized by IR, Raman, and NMR spectroscopy. The vibrational spectra were compared to the quantum‐chemical frequencies at the PBE1PBE/6‐311G(3df,3dp) level of theory and confirm the predicted C_3v symmetry of the molecule with regular C? H (109.8 pm), C? C (146.7 pm), and C?N (114.7 pm) bonds.     

C[triple‐bond]C—H⋯N hydrogen bonding in 3‐methylthio‐4‐propargylthioquinoline

The title compound, C₁₃H₁₁NS₂, contains a C[triple‐bond]C—H?N hydrogen bond to a pyridine‐type N atom, with a C?N distance of 3.305 (4) Å and an H?N distance of 2.28 Å. This is one of the shortest C—H?N hydrogen bonds known.     

Site‐Selective Remote Radical C−H Functionalization of Unactivated C−H Bonds in Amides Using Sulfone Reagents

A general and practical strategy for remote site‐selective functionalization of unactivated aliphatic C?H bonds in various amides by radical chemistry is introduced. C?H bond functionalization is achieved by using the readily installed N‐allylsulfonyl moiety as an N‐radical precursor. The in situ generated N‐radical engages in intramolecular 1,5‐hydrogen atom transfer to generate a translocated C radical which is subsequently trapped with various sulfone reagents to afford the corresponding C?H functionalized amides. The generality of the approach is documented by the successful remote C?N₃, C?Cl, C?Br, C?SCF₃, C?SPh, and C?C bond formation. Unactivated tertiary and secondary C?H bonds, as well as activated primary C?H bonds, can be readily functionalized by this method.     

Interaction of the important species HNO and HFSO2 in the atmosphere: Theoretical study of the N?H and S?H blue‐shifted hydrogen bonds

Ab initio molecular orbital and density functional theory (DFT) in conjunction with different basis sets calculations were performed to study the N? H…O and S? H…O blue‐shifted H‐bonds in the HNO…HFSO₂ complex. The geometric structures, vibrational frequencies, and interaction energies were calculated by both standard and CP‐corrected methods. Natural bond orbital (NBO) analysis was used to investigate the origin of blue‐shifted H‐bonds, showing that the decrease in the σ*(N? H) and σ*(S? H) is due to the electron density redistribution effect. The structure reorganization effect on the blue‐shifted hydrogen bonds was discussed in detail. © 2006 Wiley Periodicals, Inc. Int J Quantum Chem, 2007     

A quasi‐diamondoid hydrogen‐bonded framework in an­hydro­us sulfanilic acid

The title compound (C₆H₇NO₃S) exists as a zwitterion (4‐ammonio­benzene­sulfonate), ⁺H₃NC₆H₄SO₃^?, and these units are linked into a three‐dimensional framework by two distinct two‐centre N—H?O hydrogen bonds [H?O 1.84 and 1.87 Å; N?O 2.767 (2) and 2.746 (2) Å; N—H?O 166 and 172°] and a planar three‐centre N—H?(O)₂ hydrogen bond [H?O 2.03 and 2.37 Å; N?O 2.816 (2) and 2.877 (2) Å; N—H?O 162 and 111°; O?H?O 86°].     

Cooperative influence of water binding to peptides by N?H···OH2 and CO···HOH hydrogen bonds: Study by Ab Initio calculations

In this article, the geometry structures of hydrogen bond chains of formamide and N‐methylacetamide and their hydrogen‐bonded complexes with water were optimized at the MP2/6‐31G* level. Then, we performed Møller–Plesset perturbation method with 6‐311++g**, aug‐cc‐pvtz basis sets to study the cooperative influence to the total hydrogen bond energy by the N? H ··· OH₂ and C?O ··· HOH hydrogen bonds. On the basis of our results, we found that the cooperativity of the hydrogen‐bonded complexes become weaker as N? H ··· OH₂ and C?O ··· HOH hydrogen bonds replacing N? H ··· O?C hydrogen bonds in protein and peptide. It means that the N? H and C?O bonds in peptide prefer to form N? H ··· O?C hydrogen bond rather than to form C?O ··· HOH and N? H ··· OH₂. It is significant for understanding the structures and properties of the helical or sheet structures of protein and peptide in biological systems. © 2011 Wiley Periodicals, Inc. Int J Quantum Chem, 2011     

Thermal Decomposition of 4‐Nitroimidazole Catalyzed by Pb(NO3)2

The thermal decomposition of 4‐nitroimidazole catalyzed by Pb(NO₃)₂ was studied by the combination technique of in situ thermolysis cell with rapid‐scan Fourier transform infrared spectroscopy (thermolysis/RSFT‐IR). The results showed that the decomposition of 4‐nitroimidazole began with the split of the C–NO₂ bond in the temperature range of 185–210 °C. The strongly oxidative product NO₂ destroyed the instable annulus of 4‐nitroimidazole instantly, all the other C?N, C?C, C–H and N–H bonds of the five membered ring were broken simultaneously, and the detected gas products of 4‐nitroimidazole decomposition were NO₂, CO₂ and CO.