Substituent effects upon the catalytic activity of aromatic cyclic seleninate esters and spirodioxyselenuranes that act as glutathione peroxidase mimetics

Substituent effects were studied in a series of aromatic cyclic seleninate esters and spirodioxyselenuranes that function as mimetics of the antioxidant selenoenzyme glutathione peroxidase. The methoxy-substituted selenurane proved the most efficacious catalyst for the reduction of hydrogen peroxide with benzyl thiol, and the reaction rates were enhanced for both classes by electron-donating substituents. Hammett plots indicated rho = -0.45 and -3.1 for the seleninates and selenuranes, respectively, suggesting that oxidation at Se is the rate-determining step in their catalytic cycles.     

Remarkable activity of a novel cyclic seleninate ester as a glutathione peroxidase mimetic and its facile in situ generation from allyl 3-hydroxypropyl selenide

1,2-Oxaselenolane Se-oxide is a novel cyclic seleninate ester that functions as a remarkably efficient glutathione peroxidase mimetic by catalyzing the reduction of tert-butyl hydroperoxide to tert-butyl alcohol in the presence of benzyl thiol. The seleninate ester can be conveniently generated in situ by oxidation of allyl 3-hydroxypropyl selenide with tert-butyl hydroperoxide. Its catalytic activity surpasses that of several other known GPx mimetics containing cyclic selenenamide structures, which were also tested for comparison.     

Diselenides and allyl selenides as glutathione peroxidase mimetics. Remarkable activity of cyclic seleninates produced in situ by the oxidation of allyl omega-hydroxyalkyl selenides

A series of aliphatic diselenides and selenides containing coordinating substituents was tested for glutathione peroxidase (GPx)-like catalytic activity in a model system in which the reduction of tert-butyl hydroperoxide with benzyl thiol to afford dibenzyl disulfide and tert-butyl alcohol was performed under standard conditions and monitored by HPLC. Although the diselenides showed generally poor catalytic activity, allyl selenides proved more effective. In particular, allyl 3-hydroxypropyl selenide (25) rapidly generated 1,2-oxaselenolane Se-oxide (31) in situ by a series of oxidation and [2,3]sigmatropic rearrangement steps. The remarkably active cyclic seleninate 31 proved to be the true catalyst, reacting with the thiol via a postulated mechanism in which the thioseleninate 32 is first produced, followed by further thiolysis to selenenic acid 33 and oxidation-dehydration to regenerate 31. In contrast to catalysis with GPx, formation of the corresponding selenenyl sulfide 34 comprises a competing deactivation pathway in the catalytic cycle of 31, as a separate experiment revealed that authentic 34 was a much less effective catalyst than 31. 1,2-Oxaselenane Se-oxide (37), the six-membered homologue of 31, was formed similarly from allyl 4-hydroxybutyl selenide (26), but proved a less effective catalyst than 31. Compounds 31 and 37 are the first examples of unsubstituted monocyclic seleninate esters.     

Revisiting catechol derivatives as robust chromogenic hydrogen donors working in alkaline media for peroxidase mimetics

Colloidal noble metal-based nanoparticles are able to catalyze oxidation of chromogenic substrates by H₂O_2, similarly to peroxidases, even in basic media. However, lack of robust chromogens, which work in high pH impedes their real applications. Herein we demonstrate the applicability of selected catechol derivatives: bromopyrogallol red (BPR) and pyrogallol (PG) as chromogenic substrates for peroxidase-like activity assays, which are capable of working over wide range of pH, covering also basic values. Hyperbranched polyglycidol-stabilized gold nanoparticles (HBPG@AuNPs) were used as model enzyme mimetics. Efficiency of several methods of improving stability of substrates in alkaline media by means of selective suppression of their autoxidation by molecular oxygen was evaluated. In a framework of presented studies the impact of borate anion, applied as complexing agent for PG and BPR, on their stability and reactivity towards oxidation mediated by catalytic AuNPs was investigated. The key role of high concentration of hydrogen peroxide in elimination of non-catalytic oxidation of PG and improvement of optical properties of BPR in alkaline media containing borate was underlined. Described methods of peroxidase-like activity characterization with the use of BPR and PG can become universal tools for characterization of nanozymes, which gain various applications, among others, they are used as catalytic labels in bioassays and biosensors.     

Furan derivatives of tellurium: Synthesis and structural comparison with the thiophene analogues

α-Bromo-2-acetylfuran adds oxidatively to elemental tellurium and aryltellurium(II) bromide at ambient temperature to afford (2-furoylmethyl)tellurium(IV) dibromides, (FuCOCH₂)₂TeBr₂ (1b) and Ar(FuCOCH₂)TeBr₂ (Fu = 2-C₄H₃O; Ar = 1-C₁₀H₇, 2b; 2,4,6-Me₃C₆H₂, 3b). The iodo analogues 1c-3c can be obtained by metathesis of the bromides with an alkali iodide. Condensation reactions of the parent methyl ketone with Te(IV) chlorides results in the corresponding chloro analogues, (FuCOCH₂)₂TeCl₂ (1a) and Ar(FuCOCH₂)TeCl₂ (2a, 3a and Ar = 4-MeOC₆H₄ (4a)). These diorganotellurium dihalides are reduced with aqueous bisulfite to diorganotellurides 1-3, which can be oxidized readily with dihalogens to the desired diorganotellurium(IV) dihalides. The tellurated furan derivative, bis(2-furyl)tellurium(II), Fu₂Te (5), obtained by detelluration of bis(2-furyl)ditelluride with electrolytic copper, gives crystalline bis(2-furyl)tellurium(IV) dichloride (5a) upon chlorination. Crystal structures of Te(IV) compounds 1a, 1b, 2a-4a, and the telluride 3 together with its thiophene analogue (2,4,6-Me₃C₆H₂)((2-C₄H₃S)COCH₂)Te, 6 have been studied. Among the Te(IV) compounds, the functionalized organic moiety, FuCOCH₂-, behaves as a (C, O) chelating ligand, resulting in a intramolecular 1,4-Te?O secondary bonding interaction. Such an interaction is absent in Te(II) compounds 3 and 6, though they differ in the conformation adopted by the organic ligand. The chalcogen atoms in the heteroaroyl moiety are trans in 3 but cis in 6 which also possesses intermolecular Te?O interaction in its lattice.     

Carbon nanodots as peroxidase mimetics and their applications to glucose detection

Carbon nanodots (C-Dots) were found to possess intrinsic peroxidase-like activity, and could catalytically oxidize 3,3',5,5'-tetramethylbenzidine (TMB) by H(2)O(2) to produce a colour reaction. This offers a simple, sensitive and selective colorimetric method for glucose determination in serum.     

In vitro selection of highly modified cyclic peptides that act as tight binding inhibitors

There is a great demand for the discovery of new therapeutic molecules that combine the high specificity and affinity of biologic drugs with the bioavailability and lower cost of small molecules. Small, natural-product-like peptides hold great promise in bridging this gap; however, access to libraries of these compounds has been a limitation. Since ribosomal peptides may be subjected to in vitro selection techniques, the generation of extremely large libraries (>10(13)) of highly modified macrocyclic peptides may provide a powerful alternative for the generation and selection of new useful bioactive molecules. Moreover, the incorporation of many non-proteinogenic amino acids into ribosomal peptides in conjunction with macrocyclization should enhance the drug-like features of these libraries. Here we show that mRNA-display, a technique that allows the in vitro selection of peptides, can be applied to the evolution of macrocyclic peptides that contain a majority of unnatural amino acids. We describe the isolation and characterization of two such unnatural cyclic peptides that bind the protease thrombin with low nanomolar affinity, and we show that the unnatural residues in these peptides are essential for the observed high-affinity binding. We demonstrate that the selected peptides are tight-binding inhibitors of thrombin, with K(i)(app) values in the low nanomolar range. The ability to evolve highly modified macrocyclic peptides in the laboratory is the first crucial step toward the facile generation of useful molecular reagents and therapeutic lead molecules that combine the advantageous features of biologics with those of small-molecule drugs.     

Synthesis of substituted asymmetrical biphenyl amino esters as alpha helix mimetics

As part of our ongoing project to develop new molecular probes for estrogen receptor-alpha, we are exploring the utility of internally-substituted asymmetric biphenyls as a proteomimetic scaffold. In this study, we describe synthetic methods for preparing the requisite substituted-bromophenol precursors, their further elaboration, and the subsequent Suzuki–Miyaura coupling of these sterically-hindered and electronically-rich aromatic systems. The results provide an efficient route with which to generate further libraries of novel asymmetric biphenyl compounds as potential proteomimetics.     

A novel colorimetric determination of reduced glutathione in A549 cells based on Fe3O4 magnetic nanoparticles as peroxidase mimetics

In this paper, a novel and simple colorimetric method for the determination of reduced glutathione (GSH) based on Fe(3)O(4) magnetic nanoparticles (MNPs) as peroxidase mimetics was developed. The Fe(3)O(4) MNPs prepared via a coprecipitation method, which possess intrinsic peroxidase-like activity, were used as a catalyst in the color development reaction of a peroxidase substrate 2,2'-azino-bis(3-thylbenzo-thiazoline-6-sulfonic acid) diammonium salt (ABTS) and H(2)O(2). The existence of GSH can consume H(2)O(2) and cause a color change of the reaction system which can be detected by the naked eye. Accordingly, the GSH can be detected by measuring the wastage of H(2)O(2). A good linear relationship was obtained from 3.0 to 30.0 μM for GSH. Good recoveries ranging from 96.7 to 107% were obtained. Furthermore, it was used to detect GSH in A549 cells.     

Donor-substituted diphenylacetylene derivatives act as electron donors and acceptors

Despite the predominant electron donor character of p-phenylenediamine, our studies on extended p-phenylenediamine derivatives show that they can not only be chemically oxidized, giving well-known Wurster-type radical cations, but also be chemically reduced, giving radical anions. Making use of EPR/ENDOR spectroscopy and supported by DFT calculations, we were able to reveal the extent of π-electron delocalization in the paramagnetic species and to shed light onto the geometry and bond lengths. While for the radical anions spin was found to be mostly delocalized into the π-system, the radical cations can be described as essentially N-centered. Furthermore, we performed electrochemical characterizations using cyclic voltammetry to gain insight into the thermodynamics of the redox processes. The photophysical properties of the parent extended p-phenylenediamine were investigated by absorption, emission, and excitation spectroscopy. The fluorescence quantum yield and the excited-state lifetime of the neutral precursors in hexane and acetonitrile were determined to establish elementary differences originating from solvent effects.     

Glucuronic acid derivatives as branching units for the synthesis of glycopeptide mimetics

Natural glycopeptides and glycoproteins exhibit a large structural diversity, which can be mimicked by synthetic glycopeptide derivatives to assist the investigation of biological functions and structure-activity relationships. Here, dendronized saccharides were synthesized to provide glycosyl amino acids, equipped with a branching element for the preparation of branched glycopeptide mimetics. An optimized Staudinger-type reaction served as key reaction en route to the complex glycopeptide 14, in which three mannose moieties were connected to the branched glucuronyl scaffold.     

Concise synthesis of 1,3-di-O-substituted tetrahydropyran derivatives as conformationally stable pyranose mimetics

A practical synthetic route to 1,3-di-O-substituted tetrahydropyrans has been developed. An important feature of these obtained glycomimetics is the bulky t-butyl functionality at the C-4 position, which imposes a chair conformation as the lowest energy conformer, making these compounds ideal pyranose mimetics.     

Synthesis of bicyclic pyrimidine derivatives as ATP analogues

A highly efficient and general solid-phase synthesis of bicyclic pyrimidine derivatives that target purine dependent proteins is reported. The synthesis of the key intermediate, 4,6-disubstituted-5-amino-pyrimidine, involved reduction of the corresponding nitro derivatives using 1,1'-dioctyl-viologen in a triphasic milieu. The mild reduction conditions enable the use of any acid labile solid support as well as a wide range of combinatorial substituents, thus enabling the synthesis of large libraries of highly diverse bicyclic pyrimidines. Alternative reduction conditions with tin(II) chloride and structure-reactivity studies are discussed as well.     

Synthesis of bis‐pyrrole tetra esters and alcohols as novel mimetics of the anticancer mitomycin

Open‐chain bis‐Reissert compounds 1 were converted to the corresponding bis‐oxazolium intermediates via acid‐catalyzed intramolecular cyclization. These oxazolium compounds exist in a variety of tautomeric structures in which the meso‐ionic form can be intercepted by reaction with dipolarophiles in a 1,3‐dipolar‐cycloaddition reaction to produce a variety of highly functionalized bis‐pyrrole esters 2 . In turn, the bis‐pyrrole esters could be converted to the corresponding bis‐pyrrole tetrols 3 in high yields. J. Heterocyclic Chem., 2011.     

Colorimetric quantification of galactose using a nanostructured multi-catalyst system entrapping galactose oxidase and magnetic nanoparticles as peroxidase mimetics

A colorimetric method for quantification of galactose, which utilizes a nanostructured multi-catalyst system consisting of Fe(3)O(4) magnetic nanoparticles (MNPs) and galactose oxidase (Gal Ox) simultaneously entrapped in large pore sized mesocellular silica, is described. Gal Ox, immobilized in a silica matrix, promotes reaction of galactose to generate H(2)O(2) that subsequently activates MNPs in silica mesopores to convert a colorimetric substrate into a colored product. By using this colorimetric method, galactose can be specifically detected. Along with excellent reusability via application of simple magnetic capturing, enhanced operational stability was achieved by employing a cross-linked enzyme aggregate (CLEA) method for Gal Ox immobilization. This protocol leads to effective prevention of enzyme leaching from the pores of mesocellular silica. The analytical utility of the new colorimetric biosensor was demonstrated by its use in diagnosing galactosemia, a genetic metabolic disorder characterized by the inability to utilize galactose, through analysis of clinical dried blood spot specimens. A microscale well-plate format was employed that possesses a multiplexing capability. The multi-catalyst system entrapping Gal Ox and MNPs represents a new approach for rapid, convenient, and cost-effective quantification of galactose in human blood and it holds promise as an alternative method for galactosemia diagnosis, replacing the laborious procedures that are currently in use.     

Cyclodextrin-derived chalcogenides as glutathione peroxidase mimics and their protection of mitochondria against oxidative damage

A series of novel glutathione peroxidase (GPx) mimics based on organochalcogen cyclodextrin (CD) dimer were synthesized. Their GPx-like antioxidant activities were studied using hydrogen peroxide H₂O₂, tert-butylhydroperoxide (BHP), and cumene hydroperoxide (CHP) as substrates and glutathione as thiol co-substrate. The results showed that 6A,6B-ditelluronic acid-A,6B′-tellurium bridged γ-cyclodextrin (6-diTe-γ-CD) had the highest peroxidase activity, which was ~670-fold higher than ebselen, a well-known GPx mimic. Reduction of lipophilic CHP often proceeded much faster than reduction of the more hydrophilic H₂O₂ or BHP, which cannot bind into the hydrophobic interior of the CD. The biological activities were also evaluated for their capacity to protect mitochondria against ferrous sulfate/ascorbate-induced oxidative damage. 6-diTe-γ-CD was the best inhibitor which significantly suppressed ferrous sulfate/ascorbate-induced cytotoxicity as determined by swelling of mitochondria, lipid peroxidation and cytochrome c oxidase activity. Our data suggests that 6-diTe-γ-CD has potential pharmaceutical application in the treatment of ROS-mediated diseases.     

Controlled ring-opening polymerization of cyclic esters with phosphoric acid as catalysts

(R)-(?)-1,1′-Binaphthyl-2,2′-diyl hydrogen phosphate (BPA) has been demonstrated as an efficient organocatalyst for controlled ring-opening homopolymerization of ε-caprolactone (ε-CL) and copolymerization of ε-CL with glycolide and lactide. High molar mass PCL with narrow molar mass distribution has also been synthesized from the bulk ring-opening polymerization (ROP) of ε-CL with BPA as catalysts; the highest molar mass of PCL is 4.35?×?10⁴ g/mol with polydispersity index of 1.20. The successful synthesis of high molar mass PCL is attributed to the bifunctional activation mechanism for the ROP of ε-CL catalyzed by BPA. More interestingly, ppm level of BPA is sufficient to catalyze controlled ROP of ε-CL.     

In-silico studies of glutathione peroxidase4 activators as candidate for multiple sclerosis management

Multiple sclerosis (MS) is an autoimmune and inflammatory demyelinating disease of the central nervous system (CNS) that affects approximately 2.8 million people worldwide. Although numerous studies have been conducted to investigate novel therapeutic targets and lead compounds, few drug choices are available to treat MS patients. The etiology of this disease is still poorly understood. However, oxidative stress is proposed as one of the underlining pathology. The neuronal antioxidant enzyme glutathione peroxidase 4 (GPx4) is responsible for scaffolding toxic peroxide phospholipids and reducing neuronal death within the CNS. Therefore, screening for lead compounds able to activate this essential enzyme might protect neuronal cells from damage and slow the disease progression. This study aimed to identify potential activators of GPx4, an essential inhibitor to ferroptosis, as a novel neuroprotective strategy in MS treatment. For understanding the binding of the four selected compounds to GPX4 protein showing the mechanism of the interaction, molecular docking analysis and molecular dynamic (MD) simulation were used. The study was carried out through various computational methods using Autodock Vina for docking of the protein and ligand and Desmond for MD simulation. The four tested compounds used to activate GPx4 are as follows: ferrostatin, lapatinib, liproxstatin-1, and PKUMDL-LDL-102. Results showed that the lapatinib had greater log P value (6.17) which indicates higher permeability through blood brain barrio (BBB) to exirt the proposed neurological effect. In the molecular docking analysis, the best docking scores was displayed by Lapatinib (?7.6 kcal/mol). Ferrostatin, Lapatinib, and Liproxstatin-1 almost bind in the similar sites of the target protein, while PKUMDL-LC-102 binds at a different site. Furthermore, MD simulation study showed a stable system for lapatinib and liproxstatin-1 as confirmed by RMSD and RMSF values during 100 ns trajectories. Additionally, the most negative ΔG Bind score (the lowest) which considered the best was exhibited by lapatinib (?47.52 Kcal/mol). The test compounds were further inspected for their intersction with GPx4 in terms of hydrophobic, hydrogen and other bonding types beside the stability of these bonds by observing the protein–ligand contact within 100 ns trajectories. Interestingly, the receptor–ligand complex showed deep continuous bands for Lapatinib with Lys127 and Gly128. In conclusion, among the four studied compounds Lapatinib could be a promising scaffold for developing effective leads capable of activating GPx4 and assist in the treatment of MS.