Mass spectroscopy of natural products. II—allogibberic acid—A model for the skeletal fragmentation of the molecular ions of GA3 type gibberellins

The positive ion mass spectrum of allogibberic acid was examined and fragmentation routes involving the carbon skeleton are proposed on the basis of mass measurements and metastable ion observations. The results are compared with the mass spectra of 3-hydroxy-epiallogibberic acid, as well as gibberellin A₃ (GA₃), 3-epi-GA₃, 3-dehydro-GA₃ and iso-GA₃, the latter compounds all being capable of undergoing aromatization of ring A giving a key ion corresponding to the molecular ions of the allogibberic acid and 3-hydroxy-epiallogibberic acid models, respectively. All the gibberellin derivatives investigated show the same fragmentation of the skeleton. Thus, the behaviour under electron impact of the GA₃ type gibberellins follows a general pattern.     

Comparison between thermal analysis and mass spectroscopic studies of uranyl oxinates

The 5,7-dichloro, 5,7-dibromo, 5,7-diiodo and 5,6-dinitro derivatives of oxine (ligandsL ₁,–L ₄) were used to prepare uranyl chelates (A ₁–A ₄). Thermal analysis (DTA) and mass spectroscopic studies were performed. The stoichiometries of the chelates were determined by elemental analysis, molecular weight determination applying an -spectroscopic liquid scintillation counter and mass spectral measurements. The uranylligand ratios were found to be 11 for A₁, 13 for A₂, 12 (monohydrate) for A₃, and 12 forA ₄. The correlation between the thermal analysis and mass spectra was examined. The activation energy required for each step of thermal degradation of the ligands and chelates was calculated. The natures of most of the molecular ions obtained in the mass spectra were also explained.     

Identification of radiation‐induced radical structure in azocalix[4]arene: an EPR study

A macrocyclic azocalix[4]arene (1) based ester derivative was synthesized. The single crystals of azocalix[4]arene were produced by slow evaporation of concentrated ethyl acetate solutions. These single crystals were exposed to ⁶⁰Co gamma rays with a dose rate of 0.980 kGy h^‐1 for 48 and 72 h to produce a stable free radical. Electron paramagnetic resonance (EPR) measurements were performed in three mutually perpendicular planes of the single crystal in the magnetic field, in addition, temperature dependence of the EPR signal was studied between 120 K and 450 K. The spectra were found to be temperature and angular dependent. Analysis based on the spectra recorded showed that a free radical was formed by fission of a C–H bond. This radical is described as ^?C_aHC_bH₃ The averages of the principal values of the hyperfine parameters and g‐factor are: g = 2.0034, A_Ha = 1.28 mT, A_H1=H2 = 1.00 mT, and A_H3 = 0.49 mT. Copyright © 2013 John Wiley & Sons, Ltd.     

Gitterschwingungsspektren XVIII.1 Chromthio- und Chromselenospinelle mit 1:1-Ordnung auf den Tetraederpl?tzen

The infrared spectra of spinel-type compounds A⁺A³⁺ Cr₄X₈ (A⁺ = Li, Cu, Ag; A³⁺ = Al, Ga, In; X = S, Se) have been measured. The spectra show that the spinels LiGaCr₄S₈, LiInCr₄S₈, CuGaCr₄S₈, CuInCr₄S₈, AgInCr₄S₈, CuGaCr₄Se₈, CuInCr₄Se₈, and AgInCr₄Se₈, whose structures cannot be determined by X-ray methods in all cases, have a structure with 1:1 ordering on the tetrahedral site (space group $\text{F}\text{4}\text{3m}$). No ordering takes place in AgGaCr₄S₈. The spectra of the ordered spinels are discussed in relation to two-mode type spectra of spinel mixed crystals.     

Synthesis and analytical characterization of novel pyridyl‐substituted 1,1′‐ethenedithiolato complexes

Some 1,1′‐ethenedithiolato complexes of nickel(II), palladium(II), and platinum(II) with different phosphine ligands, such as PPh₃, PEt₃, and dppe were prepared. Starting from 2‐, 3‐ as well as 4‐pyridyl methyl ketone, the complexes 1–15 were obtained in an one‐pot synthesis through reaction with carbon disulfide, using potassium‐tert‐butylate as a base. They were characterized by ¹H, ¹³C, and ³¹P NMR, mass spectra, infrared spectra, and UV–VIS spectra. The molecular structures of the (Ph₃P)₂Pd^II complex 9 containing the 3‐pyridyl‐ethenedithiolato ligand and of the (Et₃P)₂Pt^II complex 12 containing the 4‐pyridyl‐ethenedithiolato ligand were determined. © 2005 Wiley Periodicals, Inc. Heteroatom Chem 16:369–378, 2005; Published online in Wiley InterScience ( www.interscience.wiley.com ). DOI 10.1002/hc.20103     

Tautomerism of aza cycles: II. Synthesis and structure of 5-substituted 3-(2-hydroxyethylsulfanyl)-1<Emphasis Type="Italic">H</Emphasis>-1,2,4-triazoles and their salts. Preference of the 1H,4<Emphasis Type="Italic">H</Emphasis>-1,2,4-triazolium tautomers

New complexing agents, potentially tautomeric 3-(2-hydroxyethylsulfanyl)-1H-1,2,4-triazole, its 5-methyl-and 5-phenyl-substituted analogs, and some their salts, were synthesized, and their structure was discussed on the basis of the ¹H and ¹³C NMR, IR, and mass spectra, X-ray diffraction data, and published data. In keeping with the rule formulated previously for N-unsubstituted 1,2,4-triazoles having dissimilar substituents, the synthesized compounds were found to exist as 3-(2-hydroxyethylsulfanyl)-5-R-1H-1,2,4-triazole tautomers (3-R_A-5-R_D-1H-1,2,4-triazoly). They are protonated at the nitrogen atom in position 4 of the triazole ring. The ¹H and ¹³C NMR spectra of these compounds in trifluoroacetic acid suggest the presence of two forms due to equilibrium between the neutral and protonated species. Analysis of the crystallographic data for the triazolium salts and published data showed preference of the 1H,4H-1,2,4-triazolium tautomer.     

Intrakonfigurations‐, Trip‐Multiplett‐ sowie anomal polarisierte A1gund A2g‐Übergänge in elektronischen und vibratorischen Resonanz‐Raman‐Spektren von (spinentarteten) trans‐Di(cyano)phthalocyaninatorhenaten

Intraconfigurational, Trip‐Multiplet, and Anomalously Polarised A_1g and A_2g Transitions in Electronic and Vibrational Resonance Raman Spectra of (Spin‐Degenerate) trans ‐Di(cyano)phthalocyaninatorhenates Brown bis(tetra(n‐butyl)ammonium) trans‐di(cyano)phthalocyaninato(2‐)rhenate(II) ( 1 ) is prepared by melting bis(phthalocyaninato(2‐)rhenium(II)) with tetra(n‐butyl)ammonium cyanide. According to electrochemical data, 1 is oxidised by iodine to yield blue tetra(n‐butyl)ammonium trans‐di(cyano)phthalocyaninato(2‐)rhenate(III) ( 2 ), whose cation exchange in the presence of bis(triphenylphosphine)iminium salts has been confirmed by x‐ray structure determination. 1 and 2 dissolve without dissociation of the cyano ligands in conc. sulfuric acid. Dilution with cold water precipitates blue trans‐di(cyano)phthalocyaninato(2‐)rhenium(III) acid. 1 and 2 are oxidised by bromine yielding violet trans‐di(cyano)phthalocyaninato(1‐)rhenium(III). Oxidation of 2 with dibenzoylperoxide and N‐chlorsuccinimide is described. 1 and 2 are characterised by polarised resonance Raman(RR) spectra, FIR/MIR spectra, and UV‐Vis‐NIR spectra. Due to a Kramers degenerate ground electronic state of low‐spin Re^II, a polarisation anomaly of the totally symmetric vibrations a_1g at 598 and 672 cm^–1 with depolarisation ratios ρ_l > 3 is observed in the RR spectra of 1 . Weak bands in the unusual UV‐Vis‐NIR spectrum of 1 , starting at 10200 cm^–1, are attributed to trip‐multiplet (TM) transitions. An electronic RR effect is detected for 2 . The selectively enhanced anomalously polarised line at 1009 cm^–1 with ρ_l ≈ 15 and the (de)polarised lines between 1688 and 2229 cm^–1 are attributed to intraconfigurational transitions A_1g → A_2g > A_1g, B_1g, B_2g, E_g arising from the ³T_1g ground electronic state of low‐spin Re^III split by spin‐orbit coupling and low symmetry (D ). Some of their vibronic bands are detected in the IR spectrum between 1900 and 4000 cm^–1. B and Q transitions of 2 at 16700 and 31900 cm^–1, respectively, as well as eight weak TM transitions are observed between 5050 and 26100 cm^–1.     

Synthesis and magnetic properties of a new layered oxide La<Subscript>1.5</Subscript>Sr<Subscript>1.5</Subscript>Mn<Subscript>1.25</Subscript>Ni<Subscript>0.75</Subscript>O<Subscript>6.67</Subscript>

A new oxide phase La_1.5Sr_1.5 Mn_1.25Ni_0.75O_{6.67 ± 0.05}, a member of the A_{n + 1} BnO_3n+1(n=2) Rad-dlesden—Popper homologue series, was synthesized, and its structure and magnetic properties characterized. Magnetic anomalies associated with the competition between antiferromagnetic and ferromagnetic orders are observed in the range of the temperatures studied (2-400 K). The ESR spectra of the compound feature the constriction of a magnetic signal and a shift toward g(Mn⁴⁺).     

The analytical resolution of parallel first‐ and second‐order reaction mechanisms

Given the species A₁ and A₂, the competition among the three different elementary processes (1) (2) (3) is frequently found in thermal and photochemical reaction systems. In the present paper, an analytical resolution of the system (1)–(3), performed under plausible contour conditions, namely, finite initial molar concentrations for both reactants, [A₂]₀ and [A₁]₀, and nonzero reaction rate coefficients k₁, k₂, and k₃, leads to the equation [A₁] = ((δ[A₂]^γ ? [A₂])/β) ? α, where α = k₁/2k₃, γ = β + 1 = 2k₃/k₂, and δ = ([A₂]₀ + β[A₁]₀ + β α))/[A₂]₀^γ. The comparison with a numerical integration employing the fourth‐order Runge–Kutta algorithm for the well‐known case of the oxidation of organic compounds by ferrate ion is performed. © 2010 Wiley Periodicals, Inc. Int J Chem Kinet 42: 562–566, 2010     

Über Chalkogenolate. 85. Untersuchungen über Halbester der Trithiokohlensäure 3. Schwingungsspektren von Alkylthioxanthogensäuren und Wasserstoffbrücken in den freien Säuren

On Chalcogenolates. 85. Studies on Hemiesters of Trithiocarbonic Acid 3. Vibrational Spectra of Alkyl Thioxanthic Acids and Hydrogen Bondings in the Free Acids The IR spectra of alkyl thioxanthic acids RS? CS(SH) with R = CH₃, C₂H₅, ⁿC₃H₇, ⁱC₃H₇, ⁿC₄H₉, ^sC₄H₉, ^tC₄H₉, and CH₃S? CS(SD) as well as the Raman spectrum of the Compound with R = CH₃ have been assigned. The formation of hydrogen bondings in the free acids has been studied by means of i.r. spectra, ¹H-n.m.r. spectra, and electron absorption spectra. The energies of the hydrogen bondings have been calculated.     

Istamycin aminoglycosides profiling and their characterization in Streptomyces tenjimariensis ATCC 31603 culture using high‐performance liquid chromatography with tandem mass spectrometry

A high‐performance liquid chromatography with electrospray ionization ion trap tandem mass spectrometry method was developed and validated for the robust profiling and characterization of biosynthetic congeners in the 2‐deoxy‐aminocyclitol istamycin pathway, from the fermentation broth of Streptomyces tenjimariensis ATCC 31603. Gradient elution on an Acquity CSH C₁₈ column was performed with a gradient of 5 mM aqueous pentafluoropropionic acid and 50% acetonitrile. Sixteen natural istamycin congeners were profiled and quantified in descending order; istamycin A, istamycin B, istamycin A₀, istamycin B₀, istamycin B₁, istamycin A₁, istamycin C, istamycin A₂, istamycin C₁, istamycin C₀, istamycin X₀, istamycin A₃, istamycin Y₀, istamycin B₃, and istamycin FU‐10 plus istamycin AP. In addition, a total of five sets of 1‐ or 3‐epimeric pairs were chromatographically separated using a macrocyclic glycopeptide‐bonded chiral column. The lower limit of quantification of istamycin‐A present in S. tenjimariensis fermentation was estimated to be 2.2 ng/mL. The simultaneous identification of a wide range of 2‐deoxy‐aminocyclitol‐type istamycin profiles from bacterial fermentation was determined for the first time by employing high‐performance liquid chromatography with tandem mass spectrometry analysis and the separation of istamycin epimers.     

Uniform AMoO4:Ln (A=Sr, Ba; Ln=Eu, Tb) submicron particles: Solvothermal synthesis and luminescent properties

Rare-earth ions (Eu³⁺, Tb³⁺) doped AMoO₄ (A=Sr, Ba) particles with uniform morphologies were successfully prepared through a facile solvothermal process using ethylene glycol (EG) as protecting agent. X-ray diffraction (XRD), scanning electron microscopy (SEM), transmission electron microscopy (TEM), X-ray photoelectron spectra (XPS), Fourier transform infrared spectroscopy (FT-IR), photoluminescence (PL) spectra and the kinetic decays were performed to characterize these samples. The XRD results reveal that all the doped samples are of high purity and crystallinity and assigned to the tetragonal scheelite-type structure of the AMoO₄ phase. It has been shown that the as-synthesized SrMoO₄:Ln and BaMoO₄:Ln samples show respective uniform peanut-like and oval morphologies with narrow size distribution. The possible growth process of the AMoO₄:Ln has been investigated in detail. The EG/H₂O volume ratio, reaction temperature and time have obvious effect on the morphologies and sizes of the as-synthesized products. Upon excitation by ultraviolet radiation, the AMoO₄:Eu³⁺ phosphors show the characteristic ⁵D₀–⁷F_1–4 emission lines of Eu³⁺, while the AMoO₄:Tb³⁺ phosphors exhibit the characteristic ⁵D₄–⁷F_3–6 emission lines of Tb³⁺. These phosphors exhibit potential applications in the fields of fluorescent lamps and light emitting diodes (LEDs).     

Über Chalkogenolate. 94. Untersuchungen über Trithioallophansäure 3. Ester der Trithioallophansäure [1]

On Chalcogenolates. 94. Studies on Trithioallophanic Acid. 3. Esters of Trithioallophanic Acid. The esters of trithioallophanic acid H₂N? CS? NH? CS(SR) with R = CH₃, CH₂C₆H₅ have been characterized by means of electron absorption spectra, infrared spectra, ¹H NMR spectra, and mass spectra.     

Glycosylated platycosides: Identification by enzymatic hydrolysis and structural determination by LC–MS/MS

In this study, enzymatic hydrolysis and chemometric methods were utilized to discriminate glycosylated platycosides in the extract of Platycodi Radix by LC–MS. Laminarinase, whose enzymatic activity was evaluated using gentiobiose and laminaritriose, was a suitable enzyme to identify the glycosylated platycosides. The laminarinase produced deapi‐platycodin D and platycodin D from the isolated deapi‐platycoside E and platycoside E through the loss of two glucose units by enzymatic reaction, respectively. After hydrolyzing a crude extract by laminarinase, the reconstructed total ion chromatogram generated by a chemometric technique sorted peaks of deglycosylated platycosides easily. Structural information of the glycosylated isomers was revealed through fragment ions generated by the sodiated C_0β ion corresponding to reduced disaccharides in the positive MS⁴ spectra. Characteristic fragment ions of Glc‐(1→6)‐Glc moieties were observed through ring cleavages of ^0,2A_0β, ^0,3A_0β, and ^0,4A_0β, whereas Glc‐(1→3)‐Glc moieties produced only ^0,3A_0β ions. Lithium‐adducted platycosides allowed more detailed structural analysis of glycosidic bond cleavage corresponding to Y_1β and B_1β in addition to ring cleavage.     

Chemical bond breaking/forming as a Franck–Condon electronic process

We describe chemical bond changes as Franck–Condon electronic processes within a new theoretical ansatz that we call ‘rigged’ Born–Oppenheimer (R-BO) approach. The notion of the separability of nuclear and electron states implied in the standard Born–Oppenheimer (BO) scheme is retained. However, in the present scheme the electronic wave functions do not depend upon the nuclear coordinate (R-space). The new functions are obtained from an auxiliary Hamiltonian corresponding to the electronic system (r-coordinates) submitted to a Coulomb potential generated by external sources of charges in real space (α-coordinates) instead of massive nuclear objects. A stationary arrangement characterized by the coordinates α_0A, is determined by a particular electronic wave function, ψ(r;α_0A); it is only at this stationary point, where an electronic Schrödinger equation: H_e(r,α_0A)|Ψ(r;α_0A)=E(α_0A)|Ψ(r;α_0A) must hold. This equation permits us to use modern electronic methods based upon analytic first and second derivatives to construct model electronic wave functions and stationary geometry for external sources. If the set of wave functions {Ψ(r;α_0A)} is made orthogonal, the energy functional in α-space, E(α;α_0A)=Ψ(r;α_0A)|H_e(r,α_0A)|Ψ(r;α_0A) is isomorphic to a potential energy function in R-space: E(R;α_0A)=Ψ(r;α_0A)|H_e(r,R)|Ψ(r;α_0A). This functional defines, by hypothesis, a trapping convex potential in R-space and the nuclear quantum states are determined by a particular Schrödinger equation. The total wave function for the chemical species A reads as a product of our electronic wave function with the nuclear wave function (Ξ_ik(R;α_0A)): Φ_ik(r,R)=Ψ_i(r,α_0A)Ξ_ik(R;α_0A). This approach facilitates the introduction of molecular frame without restrictions in the R-space. Two molecules (characterized with different electronic spectra) that are decomposable into the same number of particles (isomers) have the same Coulomb Hamiltonian and they are then characterized by different electronic wave functions for which no R-coordinate ‘deformation’ can possibly change its electronic structure. A bond breaking/forming process must be formally described as a spectroscopic-like electronic process. The theory provides an alternative to the adiabatic as well as the diabatic scheme for understanding molecular processes. As an illustration of the present ideas, the reaction of H₂+CO leading to formaldehyde is examined in some detail.     

Synthesis, Structure, and 31P NMR of Sulfur/Oxygen-Bridged Incomplete Cubane-Type Molybdenum and Tungsten Clusters with Triphenylphosphine Ligands

Sulfur/oxygen-bridged incomplete cubane-type triphenylphosphine molybdenum and tungsten-clusters [Mo₃S₄Cl₄(H₂O)₂(PPh₃)₃]·3THF (1A), [Mo₃S₄Cl₄(H₂O)₂(PPh₃)₃]·2THF (2A), [Mo₃OS₃Cl₄(H₂O)₂(PPh₃)₃]·2THF (1B), and [W₃S₄Cl₄(H₂O)₂(PPh₃)₃]·2THF (1C) were prepared from the corresponding aqua clusters and PPh₃ in THF/MeOH. On recrystallization from THF, procedures with and without addition of hexane to the solution gave 1A and 2A, respectively, while the procedures gave no effect on the formation of 1B and 1C. Crystallographic results obtained are as follows: 1A: monoclinic, P2₁/n, a=17.141(4) Å, b=22.579(5) Å, c=19.069(4) Å, =96.18(2)°, V=7337(3) ų, Z=4, R(R _w)=0.078(0.102); 1C: monoclinic, P2 ₁/c, a=12.635(1) Å, b=20.216(4) Å, c=27.815(3) Å, =96.16(1)°, V=7062(2) ų, Z=4, R(R _w)=0.071(0.083). If the phenyl groups are ignored, the molecule [Mo₃S₄Cl₄(H₂O)₂(PPh₃)₃] in 2A has idealized CS symmetry with the mirror plane perpendicular to the plane determined by the metal atoms, while the molecule in 1A does not have the symmetry. The tungsten compound 1C is isomorphous with the molybdenum compound 2A. ³¹P NMR spectra of 1A, 2A, and 1C were obtained and compared with similar clusters with dmpe (1,2-bis(dimethylphosphino)ethane) ligands.     

Two pseudo‐enantiomeric forms of N‐benzyl‐4‐hydroxy‐1‐methyl‐2,2‐dioxo‐1H‐2λ6,1‐benzothiazine‐3‐carboxamide and their analgesic properties

The fact that molecular crystals exist as different polymorphic modifications and the identification of as many polymorphs as possible are important considerations for the pharmaceutic industry. The molecule of N‐benzyl‐4‐hydroxy‐1‐methyl‐2,2‐dioxo‐1H‐2λ⁶,1‐benzothiazine‐3‐carboxamide, C₁₇H₁₆N₂O₄S, does not contain a stereogenic atom, but intramolecular hydrogen‐bonding interactions engender enantiomeric chiral conformations as a labile racemic mixture. The title compound crystallized in a solvent‐dependent single chiral conformation within one of two conformationally polymorphic P2₁2₁2₁ orthorhombic chiral crystals (denoted forms A and B). Each of these pseudo‐enantiomorphic crystals contains one of two pseudo‐enantiomeric diastereomers. Form A was obtained from methylene chloride and form B can be crystallized from N,N‐dimethylformamide, ethanol, ethyl acetate or xylene. Pharmacological studies with solid–particulate suspensions have shown that crystalline form A exhibits an almost fourfold higher antinociceptive activity compared to form B.     

The electron-impact-induced fragmentation of some alkyl isocyanides and α-branched alkyl cyanides

The HRP mass spectra of some alkyl isocyanides (R? NC in which R equals CH₃, C₂H₅, n-C₃H₇, n-C₄H₉ and t-C₄H₉) and two methyl branched alkyl cyanides (R? CN in which R equals i-C₃H₇ and t-C₄H₉) have been studied. Using metastable ion transitions and appearance potentials, the fragmentation patterns and spectral characteristics of the isocyanides can be given. A comparison has been made with the mass spectral data of the corresponding cyanides. Although the mass spectra of alkyl cyanides and isocyanides show close relationship, evidence could be obtained that this resemblance is not caused by rearrangement of the isocyanide into cyanide molecules. The main difference between the spectra of both compounds is caused by the strength of the α-bond, being weaker in the case of the isocyanides. The abundance of ions formed by α-bond cleavage decreases with increasing size of the alkyl group.     

Doubly charged ion mass spectra: III—N-alkanes

Doubly charged ion mass spectra have been obtained for 15 n-alkane hydrocarbons. Spectra were measured using a Nier-Johnson geometry Hitachi RMU-7L mass spectrometer operated at 1.6kV accelerating voltage. Fragment ions, which resulted from C? C bond rupture and extensive H loss, dominated the spectra. Molecular ions have not been observed. The most intense ions in the doubly charged ion mass spectra of n-alkanes were [C₂H₄]²⁺, [C₃H₂]²⁺, [C₄H₃]²⁺, [C₅H₂]²⁺, [C₆H₆]²⁺, [C₆H₈]²⁺, [C₇H₆]²⁺, [C₇H₈]²⁺, [C₈H₆]²⁺ and [C₈H₈]²⁺. Appearance energies for forming the prominent doubly charged fragment ions have been measured and range from 27.5 eV to energies greater than 60eV. A geometry optimized SCF approach has been used to compute the energies and structures of prominent ions in the doubly charged mass spectra.     

Air‐Stable,Well‐Soluble AI2[Nb6Cl18] Cluster Compounds (AI = Organic Cation): A New Route for Preparation,Single‐Crystal Structures,Properties, and ESI‐Mass Spectra

Five niobium cluster compounds of the A^I₂[Nb₆Cl₁₈] type (A^I = organic cation: [nPr₄N]⁺, [nBu₄N]⁺, [BMIm]⁺, [Ph₄P]⁺, and [PPN]⁺) are obtained through treatment of [Nb₆Cl₁₄(H₂O)₄] · 4H₂O with excess of thionyl chloride in the presence of an organic chloride, A^ICl. Single‐crystal structure studies show that the compounds consist of discrete cations and cluster [Nb₆Cl₁₈]^2– anions. The cluster unit of the hydrated cluster starting material is oxidized by two electrons. Powder diffraction studies and NMR spectroscopic measurements show all compounds to crystallize without co‐crystallized solvent molecules. They are air and water stable. The solubility in organic solvents changes to a great extent on changing the type of cation. The ESI‐MS spectra of [nPr₄N]₂[Nb₆Cl₁₈] and [Ph₄P]₂[Nb₆Cl₁₈] show the pseudomolecular peak of the anionic cluster as well as additional signals, which involve simultaneously chloride mass loss and reduction processes.