"Quasi flexible" automatic docking processing for studying stereoselective recognition mechanisms, part 2: Prediction of DeltaDeltaG of complexation and 1H-NMR NOE correlation

The purpose of this work is to apply the global molecular interaction evaluation ("Glob-MolInE") computational protocol to the study of two molecular complexes characterized by a chiral selector and a couple of enantiomeric selectands experimentally known to give large difference in the free energy of complexation much higher than the experimental error normally associated to the molecular mechanic calculations. We have considered the well known diastereomeric complexes between the selector (S)-N-(3,5-dinitrobenzoyl)-leucine-n-propylamide (S)-1 and the selectands (R) or (S)-N-(2-naphthyl)-alanine methyl ester 2, widely studied by enantioselective HPLC, NMR and X-ray. The experimental difference of free energy of complexation between [(S)-1*(R)-2] and [(S)-1*(S)-2] (-1.34 kcal/mol) was reproduced by the new computational protocol with an excellent confidence error. Detailed results about the conformational search, the "quasi-flexible" docking and the thermodynamic estimation are presented in this work. A remarkable correlation between the theoretical results and experimental data (NOE measurements, X-ray crystallographic structure of the [(S)-1*(S)-2] complex and the free energy of complexation) supports the validity of the computational approach and underline the importance of the conformational multiplicity in the definition of the macroscopic properties of the complex in solution.     

Azide/Alkyne‐“Click”‐Reactions of Encapsulated Reagents: Toward Self‐Healing Materials

The successful encapsulation of reactive components for the azide/alkyne‐“click”‐reaction is reported featuring for the first time the use of a liquid polymer as reactive component. A liquid, azido‐telechelic three‐arm star poly(isobutylene) ( = 3900 g · mol⁻¹) as well as trivalent alkynes were encapsulated into micron‐sized capsules and embedded into a polymer‐matrix (high‐molecular weight poly(isobutylene), = 250 000 g · mol⁻¹). Using (Cu^IBr(PPh₃)₃) as catalyst for the azide/alkyne‐“click”‐reaction, crosslinking of the two components at 40 °C is observed within 380 min and as fast as 10 min at 80 °C. Significant recovery of the tensile storage modulus was observed in a material containing 10 wt.‐% and accordingly 5 wt.‐% capsules including the reactive components within 5 d at room temperature, thus proving a new concept for materials with self‐healing properties.

     

Photo‐initiated thiol–ene “click” hydrogels from RAFT‐synthesized poly(N‐isopropylacrylamide)

Despite the efficiency and robustness of the widely used copper‐catalyzed 1,3‐dipolar cycloaddition reaction, the use of copper as a catalyst is often not attractive, particularly for materials intended for biological systems. The use of photo‐initiated thiol‐ene as an alternative “click” reaction to synthesize “model networks” is investigated here. Poly(N‐isopropylacrylamide) precursors were synthesized by reversible addition fragmentation chain transfer (RAFT) polymerization and were designed to have trithiocarbonate moieties as end groups. This structure design provides opportunity for subsequent end‐group modifications in preparation for thiol‐ene “click.” Two reaction routes have been proposed and studied to yield thiol and ene moieties. The advantages and disadvantages of each reaction path were investigated to propose a simple but efficient route to prepare copper‐free “click” hydrogels. © 2013 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2013 , 51, 4626–4636     

Synthesis,characterization, and micellization of PCL‐g‐PEG copolymers by combination of ROP and “Click” chemistry via “Graft onto” method

Biodegradable and biocompatible PCL‐g‐PEG amphiphilic graft copolymers were prepared by combination of ROP and “click” chemistry via “graft onto” method under mild conditions. First, chloro‐functionalized poly(ε‐caprolactone) (PCL‐Cl) was synthesized by the ring‐opening copolymerization of ε‐caprolactone (CL) and α‐chloro‐ε‐caprolactone (CCL) employing scandium triflate as high‐efficient catalyst with near 100% monomer conversion. Second, the chloro groups of PCL‐Cl were quantitatively converted into azide form by NaN₃. Finally, copper(I)‐catalyzed cycloaddition reaction was carried out between azide‐functionalized PCL (PCL‐N₃) and alkyne‐terminated poly(ethylene glycol) (A‐PEG) to give PCL‐g‐PEG amphiphilic graft copolymers. The composition and the graft architecture of the copolymers were characterized by ¹H NMR, FTIR, and GPC analyses. These amphiphilic graft copolymers could self‐assemble into sphere‐like aggregates in aqueous solution with diverse diameters, which decreased with the increasing of grafting density. © 2012 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2012     

Synthesis and phase behavior of a polynorbornene‐based molecular brush with dual “jacketing” effects

In this study, a series of well‐defined liquid crystalline molecular brushes with dual “jacketing” effects, polynorbornene‐g‐poly{2,5‐bis[(4‐methoxyhenyl)oxycarbonyl] styrene} (PNb‐g‐PMPCS), were synthesized by the “grafting through” method from ring opening metathesis polymerization of α‐norbornenyl‐terminated PMPCS. The rigid PMPCS side chain was synthesized by Cu(I)‐catalyzed atom transfer radical polymerization initiated by N‐[(2‐bromo‐2‐methylpropanoyl)ethyl]‐cis‐5‐norbornene‐exo‐2,3‐dicarboximide. The chemical structures of the molecular brushes were confirmed by ¹H NMR and gel permeation chromatography (GPC), and the thermal properties were studied by thermogravimetric analysis (TGA). GPC results reveal that the molecular brushes have relatively narrow polydispersities. TGA results show that the molecular brushes have excellent thermal stabilities. The PMPCS side chains in all the molecular brushes form the columnar nematic liquid crystalline phase, which is a little different from the behavior of linear PMPCS possibly due to the confinement or other effects of the brush architecture which leads to decreased order. © 2015 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2015 , 53, 2116–2123     

Modulating catalytic activity of polymer‐based cuAAC “click” reactions

The copper(I)‐catalyzed azide–alkyne cycloaddition (CuAAC) reaction is used to synthesize complex polymer architectures. In this work, we demonstrate the control of this reaction at 25 °C between polystyrene (PSTY) chains through modulating the catalytic activity by varying the combinations of copper source (i.e., Cu(I)Br or copper wire), ligand (PMDETA and/or triazole ligand), and solvent (toluene or DMF). The fastest rate of CuAAC was found using Cu(I)Br/PMDETA ligand in toluene, reaching near full conversion after 15 min at 25 °C. For the same catalysts system, DMF also gave fast rates of “click” (95% conversion in 25 min). Cu(0) wire in toluene gave a conversion of 98% after 600 min, a much higher rate than that observed for the same catalyst system used in DMF. When the PSTY had a chemically bound triazole ring close to the site of reaction, the rate of CuAAC in toluene increased significantly, 97% in 180 min at 25 °C, in agreement with our previously published results. This suggests that rapid rates can be obtained using copper wire and will have direct applications to the synthesis of compound where air, removal of copper, and reuse of the copper catalyst are required. © 2011 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2011     

“Bottom‐Up” Fabrication of BODIPY‐Functionalized Fluorescent Hyperbranched Glycopolymers for Hepatoma‐Targeted Imaging

A novel type of multivalent and highly specific fluorescent hyperbranched glycopolymers h‐P(GalEA‐co‐VBPT‐co‐BYMA) (hPGVB) is designed and prepared successfully via a facile “bottom‐up” strategy. The acetylated hPGVB is prepared by one‐pot reversible addition‐fragmentation chain transfer (RAFT) copolymerization of acrylate‐type galactose monomers AcGalEA and methacrylate‐type fluorescent monomers BYMA in presence of an inimer‐type RAFT chain transfer agent. After deacetylation, the resulting amphiphilic hPGVB can self‐assemble into stable nanoparticles in aqueous media, showing strong green fluorescence with relative high quantum yields and good photostability. The cell viability study indicates the excellent biocompatibility of the hPGVB fluorescent nanoparticles (FNPs) against HepG2 and NIH3T3 cells. More importantly, comparing with the galactose‐free fluorescent hyperbranched polymers h‐P(OEGMA‐co‐VBPT‐co‐BYMA), hPEVB FNPs can be selectively internalized by asialoglycoprotein (ASGP) receptor‐rich HepG2 cells, indicating their potential application in the bioimaging fields.     

Design,synthesis, and self‐assembly manipulating of polymerized ionic liquids contained imidazolium based on “Jacketing” effect

A series of novel polymerized ionic liquids (PILs) contained imidazolium, poly (2,5‐bis{[6‐(1‐butyl‐3′‐imidazolium)hexyl] oxy carbonyl}styrene salts) (denoted as P1? X^?, X^??Br^?, BF₄^?, PF₆^? and TFSI^?) were successfully synthesized via radical polymerization. The chemical structures of the monomers and their corresponding PILs were confirmed by ¹H NMR, ¹³C NMR, and Fourier transform infrared spectroscopy. Thermogravimetric analysis results showed that these PILs had excellent thermal stability. The phase transitions and liquid‐crystalline (LC) behaviors of these polymers were investigated by differential scanning calorimetry, polarized light microscopy (PLM), and wide‐angle X‐ray diffraction. The combined experimental results showed that all the PILs could form hexagonal columnar (?H) LC ordered structures because of the strong interaction between the anions and cations in the side groups except for P1? TFSI^?. The conductivities of monomers and PILs were sketchily investigated, and monomers had higher conductivities than those of conprespoding PILs. For comparison, we have synthesized a polymer without counter‐anion, but similar to the chemical structure of P1? X^?, poly (2, 5‐bis{[6‐(4‐butoxy‐4′‐oxy phenyl) hexyl] oxycarbonyl} styrene) (denoted as P2). In this case, phenyl took place of imidazolium of side chain, and LC ordered structure did not form. The comparison between P1? X^? and P2 suggested that ion played an important role in the constructing of LC ordered structure. © 2013 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2013     

Preparation of molecularly imprinted polymers via atom transfer radical “bulk” polymerization

The first application of atom transfer radical “bulk” polymerization (ATRBP) in molecular imprinting is described, which provides molecularly imprinted polymers (MIPs) with obvious imprinting effects towards the template, very fast binding kinetics, and an appreciable selectivity over structurally related compounds. In comparison with the MIP prepared via the normally used traditional “bulk” free radical polymerization (BFRP), the MIPs obtained via ATRBP showed somewhat lower binding capacities and apparent maximum numbers N_max for high‐affinity sites as well as quite similar binding association constants K_a for high‐affinity sites and high‐affinity site densities, in contrast with the previous reports (e.g., nitroxide/iniferter‐mediated “bulk” polymerization provided MIPs with improved properties). This is tentatively ascribed to the occurrence of rather fast gelation process in ATRBP, which greatly restricted the mobility of the chemical species, leading to a heavily interrupted equilibrium between dormant species and active radicals and heterogeneous polymer networks. In addition, the general applicability of ATRBP was also confirmed by preparing MIPs for different templates. This work clearly demonstrates that applying controlled radical polymerizations (CRPs) in molecular imprinting not always benefits the binding properties of the resultant MIPs, which is of significant importance for the rational use of CRPs in generating MIPs with improved properties. © 2009 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 48: 532–541, 2010     

Kinetics of bulk azide/alkyne “click” polymerization

A bulk step‐growth polymerization of multifunctional azides and alkynes through the copper (I)‐catalyzed azide‐alkyne cycloaddition (CuAAC) reaction is described. The polymerization kinetics of two systems containing different diynes, bisphenol E diyne (BE‐diyne)/bisphenol A bisazide (BA‐bisazide) and tetraethylene glycol diyne (TeEG‐diyne)/BA‐bisazide, are evaluated by differential scanning calorimetry (DSC), shear rheology, and thermogravimetric analysis. The effects of catalyst concentration on reaction kinetics are investigated in detail, as are the thermal properties (glass transition and decomposition temperatures) of the formed polymers. © 2010 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 48: 4093–4102, 2010     

A new strategy for synthesis of “umbrella‐like” poly(ethylene glycol) with monofunctional end group for bioconjugation

A novel strategy was used to synthesize poly(ethylene glycol) (PEG) with “umbrella‐like” structure containing a single reactive group at the “handle” of the “umbrella”. 1‐(Bis(2‐hydroxyethyl)amino)‐3‐(1‐ethoxyethoxy)propan‐2‐ol was used to initiate the ring‐opening polymerization (ROP) of ethylene oxide (EO) in the presence of diphenylmethylpotassium (DPMK) to obtain three‐arm PEG (PEG3), then terminated by benzyl bromide or ethyl bromide. The resultant PEG3 was hydrolyzed to generate hydroxyl group at the conjunction point, and the second step ROP of EO was carried out using PEG3‐OH as macroinitiator in the presence of DPMK. The obtained four‐arm PEG (PEG4) contained a functional hydroxyl group at the end of the fourth arm, which could be easily modified to bioactive groups such as carboxyl, active ester, amino, etc. The well‐defined structure of “umbrella‐like” PEG was characterized by GPC, ¹H NMR, and MALDI‐TOF MS in detail. Propionic acid succinimidyl ester of PEG4 (10 kDa) was utilized for protein conjugation with interferon α‐2b. © 2010 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2010     

One‐pot synthesis of surface‐functionalized molecularly imprinted polymer microspheres by iniferter‐induced “living” radical precipitation polymerization

This article describes for the first time the development of a new polymerization technique by introducing iniferter‐induced “living” radical polymerization mechanism into precipitation polymerization and its application in the molecular imprinting field. The resulting iniferter‐induced “living” radical precipitation polymerization (ILRPP) has proven to be an effective approach for generating not only narrow disperse poly(ethylene glycol dimethacrylate) microspheres but also molecularly imprinted polymer (MIP) microspheres with obvious molecular imprinting effects towards the template (a herbicide 2,4‐dichlorophenoxyacetic acid (2,4‐D)), rather fast template rebinding kinetics, and appreciable selectivity over structurally related compounds. The binding association constant K_a and apparent maximum number N_max for the high‐affinity sites of the 2,4‐D imprinted polymer were determined by Scatchard analysis and found to be 1.18 × 10⁴ M^?1 and 4.37 μmol/g, respectively. In addition, the general applicability of ILRPP in molecular imprinting was also confirmed by the successful preparation of MIP microspheres with another template (2‐chloromandelic acid). In particular, the living nature of ILRPP makes it highly useful for the facile one‐pot synthesis of functional polymer/MIP microspheres with surface‐bound iniferter groups, which allows their direct controlled surface modification via surface‐initiated iniferter polymerization and is thus of great potential in preparing advanced polymer/MIP materials. © 2010 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 48: 3217–3228, 2010     

Synthesis of Novel Core Cross‐Linked Star‐Based Polyrotaxane End‐Capped via “CuAAC” Click Chemistry

The first example of core cross‐linked star (CCS) polyrotaxane was prepared using the poly(ϵ‐caprolactone) (PCL) CCS three‐dimensional (3D) scaffold. The 3D CCS polymer was firstly prepared through the “arm‐first” approach. Then, the “arms” of the resultant PCL CCS polymer were threaded with α‐cyclodextrins (α‐CDs). The threaded α‐CDs were permanently locked by the “click” reaction of terminal alkyne functionalities of the star polymers with the azide‐functionalized end caps to afford the CCS polyrotaxanes. All analytical results confirm the formation of the CCS polyrotaxanes and reveal their characteristics, including fluorescence under UV, a channel‐type crystalline structure, a two‐step thermal decomposition, and a unique core‐shell structure in great contrast to the polymer precursors.     

Mechanistic investigation inspired “on water” reaction for hydrobromic acid‐catalyzed Friedel–Crafts–type reaction of β‐naphthol and formaldehyde

The mechanism of the HBr‐catalyzed Friedel‐Crafts‐type reaction between β‐naphthol and HCHO was investigated by DFT to improve this reaction. The HBr‐H₂O co‐catalyzed the preferential pathway undergoes the concerted nucleophilic addition and hydrogen shift, stepwise followed by H₂O elimination and the C C bond formation. The origin of the high catalytic activity of HBr is ascribed to C H···Br⁻ and O H···Br⁻ interactions, which suggest that the active species is Br⁻. Moreover, water molecules efficiently assist in improving the activity of Br⁻. The computational results show that solvent polarity profoundly affects the activation barriers. To our delight, the activation barrier of the rate‐determining step for the favored pathway in water is comparable (0.6 kcal/mol difference) with that in acetonitrile. The experimental observation further confirmed our results and demonstrated that the title reaction can be successfully achieved “on water.” Therefore, we open a new efficient and green strategy for the synthesis of biphenol derivatives. © 2017 Wiley Periodicals, Inc.     

In situ fabrication of paclitaxel‐loaded core‐crosslinked micelles via thiol‐ene “click” chemistry for reduction‐responsive drug release

In this study, a facile method to fabricate reduction‐responsive core‐crosslinked micelles via in situ thiol‐ene “click” reaction was reported. A series of biodegradable poly(ether‐ester)s with multiple pendent mercapto groups were first synthesized by melt polycondensation of diol poly(ethylene glycol), 1,4‐butanediol, and mercaptosuccinic acid using scandium trifluoromethanesulfonate [Sc(OTf)₃] as the catalyst. Then paclitaxel (PTX)‐loaded core‐crosslinked (CCL) micelles were successfully prepared by in situ crosslinking hydrophobic polyester blocks in aqueous media via thiol‐ene “click” chemistry using 2,2′‐dithiodiethanol diacrylate as the crosslinker. These PTX‐loaded CCL micelles with disulfide bonds exhibited reduction‐responsive behaviors in the presence of dithiothreitol (DTT). The drug release profile of the PTX‐loaded CCL micelles revealed that only a small amount of loaded PTX was released slowly in phosphate buffer solution (PBS) without DTT, while quick release was observed in the presence of 10.0 mM DTT. Cell count kit (CCK‐8) assays revealed that the reduction‐sensitive PTX‐loaded CCL micelles showed high antitumor activity toward HeLa cells, which was significantly higher than that of reduction‐insensitive counterparts and free PTX. This kind of biodegradable and biocompatible CCL micelles could serve as a bioreducible nanocarrier for the controlled antitumor drug release. © 2015 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2016 , 54, 99–107     

Universal xanthate‐mediated controlled free radical polymerizations of the “less activated” vinyl monomers

The living free radical polymerizations of three “less activated” monomers (LAMs), vinyl acetate, N‐vinylcarbazole, and N‐vinylpyrrolidone, were successfully achieved in the presence of a disulfide, isopropylxanthic disulfide (DIP), using 2,2′‐azoisobutyronitrile (AIBN) as the initiator. The living behaviors of polymerizations of LAMs are evidenced by first‐order kinetic plots and linear increase of molecular weights (M_ns) of the polymers with monomer conversions, while keeping the relatively low molecular weight distributions, respectively. The effects of reaction temperatures and molar ratios of components on the polymerization were also investigated in detail. The polymerization proceeded with macromolecular design via interchange of xanthate process, where xanthate formed in situ from reaction of AIBN and DIP. The architectures of the polymers obtained were characterized by GPC, ¹H NMR, UV–vis, and MALDI‐TOF‐MS spectra, respectively. © 2010 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2010