Crystal structure of (1,10-phenanthroline-N,N')(1,4,7,10-tetraazacyclododecane-N,N',N",N"')nickel(II) diperchlorate.

The crystal structure of the title compound, [Ni(C8H20N4)(C12H8N2)](ClO4)2, has been determined by X-ray diffraction. The Ni(II) ion is six coordinated with four nitrogen atoms of the tetradentate macrocyclic ligand and two nitrogen atoms of the bidentate ligand in a distorted octahedron geometry. The folded tetradentate macrocyclic ligand adopts a configuration having four five-membered chelate rings in distorted eclipsed conformations. The four hydrogen atoms of the amine groups of the macrocyclic ligand are on the same side towards the bidentate ligand.     

Molecular structures of metal macrocyclic compounds with nitrogen,oxygen, and sulfur atoms in macrocycles arising in “self-assembly” processes: quantum-chemical modeling

The results of quantum-chemical calculations of the molecular structures of d-metal macrocyclic chelate complexes with compartmental and macrocyclic (N,O)- and (N,S) donor atomic ligands arising as a result of “self-assembly” process have been systematized and generalized. It has been noticed that, generally, for such coordination compounds, molecular structures with noncoplanar chelate nodes and noncoplanar macrocycles are more typical than those with coplanar ones. The review covers the works of the author and other researchers carried out mainly over the past 20 years.     

(C‐rac‐5,5,7,12,12,14‐Hexamethyl‐1,4,8,11‐tetraazacyclotetradecane‐κ4N)(nicotinato‐O,O′)nickel(II) perchlorate

In the title compound, [Ni(C₆H₄NO₂)(C₁₆H₃₆N₄)]ClO₄, the macrocyclic unit adopts a folded conformation, allowing the two carboxyl O atoms to occupy two neighbouring coordination sites and thus form an additional four‐membered chelate ring. The less crowded side of the macrocycle (that with the two asymmetric C—H groups) is directed towards the nicotinate anion and the asymmetric C—CH₃ groups are directed away from it. The macrocyclic NH groups neighbouring the C—CH₃ groups are also directed away from the nicotinate anion, while those NH groups which are near to the geminal methyl groups are directed towards the nicotinate anion. Although the complex does not include water mol­ecules, three types of hydrogen bond were found, involving NH groups of the macrocyclic ligand, pyridine N atoms and O atoms of the perchlorate anions.     

Cobalt(ɪɪ) and nickel(ɪɪ) bis(chelate) complexes with (N,O, O)-tridentate azomethine ligands: a quantum chemical study of stereoisomers with hexa-, penta-, and tetracoordinate central atoms

Russian Chemical Bulletin - The molecular structures and relative energies of stereoisomers of the Co?? and Ni?? bis(chelate) complexes composed of hexa-, penta-, or...     

Tetracyanoquinodimethane complexes of nickel(II) with an N,O-donor macrocycle

A nickel(II) chelate, NiL¹Cl₂, has been obtained by reaction of nickel(II) chloride with a 15-membered N,O-donor macrocyclic ligand. Single-crystal X-ray studies reveal an octahedral environment around nickel(II). 7,7′,8,8′-Tetracyanoquinodimethane (tcnq) derivatives of the nickel(II) chelate were prepared by reaction with Litcnq and Et₃N(tcnq)₂. Spectroscopic measurements show the presence of only anionic tcnq in [NiL₁(tcnq)₂]·4H₂O and a mixture of non-coordinating anionic and neutral tcnq species in [NiL₁](tcnq)₄·H₂O.     

Variable coordination behaviour of pyrazole-containing N,P and N,P(O) ligands towards palladium(II)

Three bidentate, mixed-donor ligands based on a triphenylphosphine unit bearing a pyrazole group in the ortho-position of one phenyl ring have been synthesised; the N,P ligand [2-(3-pyrazolyl)phenyl]diphenylphosphine pzphos has been synthesised and transformed into new N,P(O) and N,P(S) derivatives, [2-(3-pyrazolyl)phenyl]diphenylphosphine oxide pzphos(O) and [2-(3-pyrazolyl)phenyl]diphenylphosphine sulfide pzphos(S), respectively. The coordination chemistry of pzphos and pzphos(O) towards palladium(II) has been investigated. Depending on the ligand to metal molar ratio employed in the reactions of palladium(II) with pzphos, either the 1 : 1 chelate [Pd(pzphos)Cl2] 1a or the 2 : 1 N,P chelate [Pd(pzphos)2]Cl2 1b was obtained. 1b contains two six-membered chelate rings in which the chlorides have been displaced from the inner coordination sphere of palladium. Exchange of the chloride anions in 1b for perchlorate anions was achieved using AgClO4 to give [Pd(pzphos)2][ClO4]2 1c. Reaction of pzphos(O) under the same conditions forms the 2 : 1 adduct [Pd(pzphos(O))2Cl2] 2b regardless of the metal to ligand ratio or the order of addition of reactants. Unlike the N,P chelate 1b, the N,P(O) ligands in complex 2b bind in a monodentate fashion through the N-donor atoms of the pyrazole rings. Abstraction of the chloro ligands in compound 2b using AgClO4 gave the 2 : 1 N,P(O) chelate [Pd{pzphos(O)}2][ClO4]2 2c, in which entropically unfavourable 7-membered chelate rings are formed. X-Ray diffraction has been used to confirm the solid-state structures of the pzphos(O) ligand and the complexes 1b, 1c, 2b and 2c.     

Spectral studies, cyclic voltammetry and synthesis of cobalt(II) and ruthenium(III) complexes with symmetric and asymmetric ring containing membered N2S2, N4, and N5 donor macrocyclic ligands

Reaction of divalent cobalt(II) and trivalent ruthenium(III) salts (NO3, SCN and SO4) with macrocyclic ligands L1, L2 and L3 having N2S2, N4 and N5 core, have been designed and carry out. All these three macrocyclic ligands and their complexes were obtained in pure form. Their structures were investigated by using microanalytical analyses, IR, mass, magnetic moments, electronic and EPR spectral studies. The redox properties of the complexes were also examined by cyclic voltammetry. An interesting feature of complexes is that the relatively large rings of macrocyclic ligands prevent the macrocyclic rings from approaching the metal center as closely as they would, if they were not constrained. So the Ru-N distances are longer than expected due to ring size. Electrochemical studies show that the macrocyclic ligand L1 is more effective electron donors to ruthenium than of L2 and L3. Electronic spectral properties also show that the sulphur donor atom of L1 weakens the ligand field with respect to ligand-to-metal charge-transfer band. However it is expected that second-row transition metal-ligand bonds tend to be weaker than third-row transition metal-ligand bonds. There are well-established examples of reactions in which decreased of reactivity down a triad of transition metals is not observed. These novelties are usually attributed to pi-bonding effects for ligands such as carbon monoxide, solvent effects, or a change in mechanism.     

Crystal structures of chloro-, bromo-, and nitro-substituted chromium(III) acetylacetonates

The molecular and crystal structures of chlorine-, bromine-, and nitro-substituted chromium(III) acetylacetonate are determined. Connecting the substituent to the central atom does not change bond lengths and valence angles in metal chelate rings. Studied chromium complexes are characterized by greater intermolecular interactions compared with analogous metal acetylacetonates. In some cases, intermolecular interactions increase the bend of chelate rings along the O?O line. Substituents do not interact with chromium ions of neighboring molecules because metal is blocked by three ligands.     

Interaction of Co(II), Ni(II) and Cu(II) with dibenzo-substituted macrocyclic ligands incorporating both symmetrically and unsymmetrically arranged N, O and S donors

The synthesis and characterisation of four 17-membered, dibenzo-substituted macrocyclic ligands incorporating unsymmetrical arrangements of their N(3)S(2), N(3)O(2) and N(3)OS (two ligands) donor atoms are described; these rings complete the matrix of related macrocyclic systems incorporating both symmetric and unsymmetric donor sets reported previously. The X-ray structures of three of the new macrocycles are reported. In two of the Cu(II) structures only three of the possible five donor atoms present in the corresponding macrocyclic ligand bind to the Cu(II) site, whereas all five donors are coordinated in each of the remaining complexes. The interaction of Co(II), Ni(II) and Cu(II) with the unsymmetric macrocycle series has been investigated by potentiometric (pH) titration in 95% methanol; X-ray structures of two nickel and three copper complexes of these ligands, each exhibiting 1:1 (M:L) ratios, have been obtained. The results are discussed in the context of previous results for these metals with the analogous 17-membered ring systems incorporating symmetrical arrangements of their donor atoms, with emphasis being given to both the influence of the donor atom set, as well as the donor atom sequence, on the nature of the resulting complexes.     

Chelating and bridging diphosphinoamine (PPh2)2N(iPr) complexes of copper(I)

The ligand bis(diphenylphosphino)isopropylamine (dppipa) has been shown to be a versatile ligand sporting different coordination modes and geometries dictated by copper(I). Most of the molecular structures were confirmed by X-ray crystallography. It is found in a chelating mode, in a monomeric complex when the ligand to copper ratio is 2:1. A tetrameric complex is formed when low ratios of ligand to metal (1:2) were used. But with increasing ratios of ligand to metal (1:1 and 2:1), a trimer or a dimer was obtained depending on the crystallization conditions. Variable temperature ³¹P{¹H} NMR spectra of these complexes in solution showed that the Cu–P bond was labile and the highly strained 4-membered structure chelate found in the solid state readily converted to a bridged structures. On the other hand, complexes with the ligand in a bridging mode in the solid state did not form chelated structures in solution. The effect of adding tetra-alkylammonium salts to solutions of various complexes of dppipa were probed by ³¹P{¹H} NMR and revealed the effect of counter ions on the stability of complexes in solution.     

Preparation of a new receptor for anions, macrocyclic polythiolactam—structure and high anion-binding ability

Thiocarbonylation of a macrocyclic tetralactam gave a new macrocyclic tetrathiolactam. The chemical transformation enhances hydrogen-bonding ability of the NH protons in the cavity of the macrocycle, and provides strong affinity toward anions. The association properties of the polythiolactam with anions was examined, and molecular structures of the macrocycle and its Cl⁻ complex were determined.     

Formation and dissociation kinetics and crystal structures of nickel(II)-macrocyclic tetrathiaether complexes in acetonitrile. Comparison to nickel(II)-macrocyclic tetramines

Complex formation and dissociation rate constants have been independently determined for solvated nickel(II) ion reacting with eight macrocyclic tetrathiaether ligands and one acyclic analogue in acetonitrile at 25 degrees C, mu = 0.15 M. The macrocyclic ligands include 1,4,8,11-tetrathiacyclotetradecane ([14]aneS4) and seven derivatives in which one or both ethylene bridges have been substituted by cis- or trans-1,2-cyclohexane, while the acyclic ligand is 2,5,9,12-tetrathiatridecane (Me2-2,3,2-S4). In contrast to similar complex formation kinetic studies on Ni(II) reacting with corresponding macrocyclic tetramines in acetonitrile and N,N-dimethylformamide (DMF), the kinetics of complex formation with the macrocyclic tetrathiaethers show no evidence of slow conformational changes following the initial coordination process. The differing behavior is ascribed to the fact that such conformational changes require donor atom inversion, which is readily accommodated by thiaether sulfurs but requires abstraction of a hydrogen from a nitrogen (to form a temporary amide). The latter process is not facilitated in solvents of low protophilicity. The rate-determining step in the formation reactions appears to be at the point of first-bond formation for the acyclic tetrathiaether but shifts to the point of chelate ring closure (i.e., second-bond formation) for the macrocyclic tetrathiaether complexes. The formation rate constants for Ni(II) with the macrocyclic tetrathiaethers parallel those previously obtained for Cu(II) reacting with the same ligands in 80% methanol-20% water (w/w). By contrast, the Ni(II) dissociation rate constants show significant variations from the trends in the Cu(II) behavior. Crystal structures are reported for the Ni(II) complexes formed with all five dicyclohexanediyl-substituted macrocyclic tetrathiaethers. All but one are low-spin species.     

Chemical Transformations of (2,3,9,10-Tetramethyl-1,4,5,7,8,11,12,14-Octa-Azacyclotetradeca-1,3,8,10-Tetraenato)Cobalt(II)Perchlorate

The monomeric octa-aza bis-α-diimine macrocyclic complex [Co^II(C₁₀H₂₀N₈)(H²O)](ClO₄)₂ I, undergoes various reactions on the macrocyclic ligand. Reaction of complex I with triethylamine in double molar proportions, followed by slow aerial oxidation, produces a molecular dimeric complex [Co^II(C₁₀H₁₄N₈)]₂, III, and a novel Co(I) complex [Co^I(C₁₀H₁₉N₈)], IV. Complex III is a staggered cofacial dimer with a cobalt-cobalt bond length 2.86(1) Å. The macrocyclic ligand of the complex contains an a-diimine function in each five-membered chelate ring, and a three-atom N-C-N^? delocalized system in each six-membered chelate ring. Complex IV has the 5-5-6-6 chelate arrangement because one α-diimine moiety is rearranged to a syn-anti configuration. In the structure, the two fused six-membered chelate rings are fully conjugated and the two fused five-membered rings are saturated. However, when complex I reacts with excess triethylamine under the similar conditions, a dimeric complex of another type, [Co^II(C₁₀H_l6N₈)]₂, II, was generated, in which one N-N bond of the macrocyclic ligand is broken. Complex IV can be isolated also from the reaction of complex I with excess hydrazine, followed by slow aerial oxidation. When hydrazine in double molar proportions was used, complex [Co^I(C₁₀H₁₇N₈)(NHNH)] V, which contains a coordinated diazene ligand, was obtained. Only one six-membered chelate ring of complex V is deprotonated and oxidized to form a three-atom N-C-N^? delocalized system. The structures of octa-aza complexes I-V are determined by X-ray crystallography: I, orthorhombic, C mca, a = 11.646(4), b = 17.049(3), c = 10.706(3) Å, Z = 4, R = 0.045, R_w = 0.047, based on 1024 reflections with I > 2σ(I); II, monoclinic, P 2₁/c, a = 9.814(3), b = 22.583(6). c = 14.632(9) Å, β = 98.90(5)°, Z = 4, R = 0.085, R_w = 0.101, based on 2033 reflections with I > 2σ(I); III, tetragonal, P 4/nmm, a = 15.614(3), c = 6.498(2) Å, Z = 4, R = 0.081, R_w = 0.115, based on 340 reflections with I > 2σ(I); IV, orthorhombic, P bca, a = 8.484(1), b = 16.662(3), c = 18.760(2) Å, Z = 8, R = 0.029, R_w = 0.024, based on 1441 reflections with I > 2σ(I); V, monoclinic, P 2₁/m, a = 7.892(3), b = 11.713(6), c = 9.326(4) Å, β = 108.03(3), Z = 2, R = 0.047, R_w = 0.056, based on 948 reflections with I > 2σ(I).     

Die Kristallstruktur von Bis(N,N-diethyl-N′ -benzoylselenoureato)nickel(II)

The Crystal Structure of Bis(N,N-diethyl-N′ -benzoylselenoureato)nickel(II) Ni(C₁₂H₁₅N₂OSe)₂ crystallizes in the monoclinic space group P2₁/c. The cell parameters are a = 11.399(3), b = 16.016(4), c = 14.910(6) Å, β = 104.64(3)° and Z = 4. The structure was solved with Patterson and direct methods and was refined to a final R-value of 5.43%. Nickel is coordinated to two N,N-diethyl-N′ -benzoylselenourea molecules to form a bidentally coordinated chelate complex with cis arrangement of the donor atoms. Coordinaton around the nickel atom is planar while the chelate rings diverge from planarity. The ethyl groups of one diethylamino group are disordered. The Ni? Se bond lengths are 2.244(1) and 2.264(1) Å, the Ni? O bond lengths are 1.871(4) and 1.883(4) Å, respectively.     

[(1,4,8,11‐Tetraazacyclotetradeca‐1,4,8,11‐tetrayl)tetraacetamide‐κ6N1,N4,N8,N11,O1,O8]copper(II) sulfate 4.5‐hydrate

The crystal structure of the title copper(II) complex, [Cu(C₁₈H₃₆N₈O₄)]SO₄·4.5H₂O, formed with the tetra­amide cyclam derivative 2‐(4,8,11‐triscarbamoyl­methyl‐1,4,8,11‐tetra­aza­cyclo­tetradec‐1‐yl)­acet­amide (TETAM), is described. The macrocycle lies on an inversion centre occupied by the hexacoordinated Cu atom. The four macrocyclic tertiary amines form the equatorial plane of an axially Jahn–Teller elongated octahedron. Two O atoms belonging to two diagonally opposite amide groups occupy the apical positions, giving rise to a trans‐III stereochemistry, while both the remaining pendant side arms extend outwards from the macrocyclic cavity and are engaged in hydrogen bonds with sulfate anions and co‐crystallized water mol­ecules.     

Design, synthesis, and traveling wave ion mobility mass spectrometry characterization of iron(II)- and ruthenium(II)-terpyridine metallomacrocycles

New metallomacrocycles composed of 2,2':6',2″-terpyridine (tpy) ligands and Ru(II) or Fe(II) transition metal ions were prepared by stepwise directed assembly and characterized by 2D diffusion NMR spectroscopy (DOSY), electrospray ionization traveling wave ion mobility mass spectrometry (ESI TWIM MS), and molecular modeling. The supramolecular polymers synthesized include a homonuclear all-Ru hexamer as well as heteronuclear hexamer and nonamer with alternating Ru/Ru/Fe metal centers. ESI MS yields several charge states from each supramacromolecule. If ESI is interfaced with TWIM MS, overlapping charge states and the isomeric components of an individual charge state are separated based on their unique drift times through the TWIM region. From experimentally measured drift times, collision cross-sections can be deduced. The collision cross-sections obtained for the synthesized supramacromolecules are in good agreement with those predicted by molecular modeling for macrocyclic structures. Similarly, the hydrodynamic radii of the synthesized complexes derived from 2D DOSY NMR experiments agree excellently with the radii calculated for macrocyclic architectures, confirming the ESI TWIM MS finding. ESI TWIM MS and 2D DOSY NMR spectroscopy provide an alternative approach for the structural analysis of supramolecules that are difficult or impossible to crystallize, such as the large macrocyclic assemblies investigated. ESI TWIM MS will be particularly valuable for the characterization of supramolecular assemblies not available in the quantity or purity required for NMR studies.     

DFT B3LYP calculation of the spatial structure of Co(II), Ni(II), and Cu(II) template complexes formed in ternary systems metal(II) ion-dithiooxamide-formaldehyde

The hybrid density functional theory B3LYP method with the 6-31G(d) basis set and the Gaussian 98 program has been used for calculating the geometric parameters of the Mn(II), Co(II), Ni(II), and Cu(II) complexes with NNSS-donor macrocyclic ligands forming in the course of template processes in the M(II)-dithiooxamide-formaldehyde systems. The bond lengths and bond angles in the complexes with the MN₂S₂ metal chelate core are reported. For all M(II) ions, the extra six-membered chelate ring that form as a result of template assembly is rotated through a rather large angle with respect to two five-membered rings and the ring itself is not planar.     

Diazadibora[1.1.1.1]m,p,m,p‐cyclophanes: Ambipolar Conjugated Macrocycles with Different B–π–N Embedded Patterns

Are different B(boron)–π–N(nitrogen) embedded patterns to bring about significant different (opto)electronic properties for the same macrocyclic molecular backbone? A series of B–π–N‐embedded alternate‐meta‐para‐linked cyclophanes 1 – 3 have been prepared and characterized as a new class of ambipolar π‐conjugated B–π–N macrocycles. The answer to the opening question is yes. These macrocycles revealed the intramolecular charge transfer in the oxidized states and the intriguing photophysical proprerties in accordance with the embedded patterns, suggesting the electronic structures are tunable by introducing multiple B–π–N moieties.     

Synthesis,Spectroscopic Characterization,DFT Calculations,and Dynamic Behavior of Mononuclear Macrocyclic Diorganotin(IV) Bis‐Dithiocarbamate Complexes

Nine mononuclear diorganotin(IV) dithiocarbamate complexes 1 – 9 with 19‐, 20‐ and 21‐membered macrocyclic structures were synthesized from dimethyl, di‐n‐butyl, and diphenyltin(IV) dichloride and three bis‐dithiocarbamate ligands derived from secondary bis‐amines having aromatic spacer groups. All compounds were characterized by elemental analysis, mass spectrometry, and spectroscopic methods (IR and ¹H, ¹³C, and ¹¹⁹Sn NMR). Additionally, quantum chemical DFT calculations were performed for the dimethyltin(IV) derivatives in order to model the molecular structures. For one compound series the NMR spectra showed a concentration‐dependent behavior in solution, which was analyzed in detail and permitted to postulate the existence of an equilibrium with the corresponding [2+2] macrocycles.