Studies on some ternary complexes of copper(II) involving an amino penicillin drug

Multiple equilibrium studies by pH-metric measurements in the ternary copper(II) complexes with ampicillin(amp) as ligand A and glycine(gly), dl-2-aminobutanoic acid(2aba), dl-3-aminobutanoic acid(3aba), 1,2-diaminopropane(dp), 1,3-diaminopropane(tp), dl-2,3-diaminopropanoic acid(dapa), dl-2,4-diaminobutanoic acid(daba) & dl-2,5-diaminopentanoic acid(ornithine)(orn) as ligands B show the presence of CuABH, CuAB or CuAH?1 B ternary complex species. In the CuAB species the binding of the ligands A and B is similar to their binding in their respective binary complexes. In CuABH_?1 species the deprotonation occurs with amp(A) ligand. The Δlog K values indicate higher stabilities for the ternary complexes than the binary species. The CuAB species with B = gly, 2aba, dapa & orn have been isolated and characterized. The conductivity measurements indicate that the complexes are non-electrolytes. Magnetic susceptibility and electronic spectral data suggest a square pyramidal geometry for CuAB with B = gly/2aba complexes and distorted octahedral geometry for CuAB with B = dapa/orn. The vibrational spectra are interpreted to find the mode of binding of ligand to metal. The TG/DTA studies reveal that the complexes decompose in three steps, indicating non-involvement of hydrated or coordinated water molecules in the complex. The cyclic voltammograms indicate a quasi reversible Cu²⁺/Cu⁺ couple. The antimicrobial activity and CT-DNA cleavage ability of the complexes show higher activity for ternary complexes.     

Effect of glycine,dl-alanine and dl-2-aminobutyric acid on the temperature of maximum density of water

The effect of glycine, dl-alanine and dl-2-aminobutyric acid on the temperature of maximum density of water was determined from density measurements using a magnetic float densimeter.Densities of aqueous solutions were measured within the temperature range from T = (275.65 to 278.65) K at intervals of T = 0.50 K over the concentration range between (0.0300 and 0.1000) mol · kg⁻¹. A linear relationship between density and concentration was obtained for all the systems in the temperature range considered.The temperature of maximum density was determined from the experimental results. The effect of the three amino acids is to decrease the temperature of maximum density of water and the decrease is proportional to molality according to Despretz equation. The effect of the amino acids on the temperature of maximum density decreases as the number of methylene groups of the alkyl chain becomes larger. The results are discussed in terms of (solute + water) interactions and the effect of amino acids on water structure.     

Solubilities of l-glutamic acid, 3-nitrobenzoic acid,p-toluic acid,calcium-l-lactate,calcium gluconate,magnesium-dl-aspartate,and magnesium-l-lactate in water

Solubilities of l -glutamic acid, 3-nitrobenzoic acid, p -toluic acid, calcium-l -lactate, calcium gluconate, magnesium- dl -aspartate, and magnesium- l -lactate in water were determined in the temperature range 278 K to 343 K. The apparent molar enthalpies of solution at T =  298.15 K as derived from these solubilities areΔ_solH_m (l -glutamic acid,m_sat =  0.0565 mol · kg ^− 1)  =  30.2 kJ · mol ^− 1,Δ_solH_m (3-nitrobenzoic acid, m =  0.0188 mol · kg ^− 1)  =  28.1 kJ · mol ^− 1, Δ_solH_m( p - toluic acid, m =  0.00267 mol · kg ^− 1)  =  23.9 kJ · mol ^− 1,Δ_solH_m (calcium- l -lactate tetrahydrate,m =  0.2902 mol · kg ^− 1)  =  25.8 kJ · mol ^− 1,Δ_solH_m (calcium gluconate, m =  0.0806 mol · kg ^− 1)  =  22.1 kJ · mol ^− 1, Δ_solH_m(magnesium-dl -aspartate tetrahydrate, m =  0.1469 mol · kg ^− 1)  =  11.5 kJ · mol ^− 1, andΔ_solH_m (magnesium- l -lactate trihydrate,m =  0.3462 mol · kg ^− 1)  =  3.81 kJ · mol ^− 1.     

Spectroscopic characterization of Cu(II) complex of l-phenylalanine and d,l-tryptophan

In this work, the reactions involving l-phenylalanine and d,l-tryptophan in the presence of Cu(II) ion were studied. Optimum conditions for the reactions were established as pH 7 and λ = 641 nm. When the reaction was kinetic, it was observed that the following rate formula was found as dA/Aⁿ = k dt and k = 3.2 × 10^?4 s^?1, according to absorbance measurements. Using a perpetual change curve, the ratio of [Cu]/[Cu] + l-phenylalanine + [d,l-tryptophan] was found 1:1:1. According to this result, one molecule of l-phenylalanine and one molecule of d,l-tryptophan react with one molecule Cu(II) ion.     

Excess molar enthalpies of binary systems containing 2-octanone,hexanoic acid,or octanoic acid at T = 298.15 K

An isothermal titration calorimeter was used to measure the excess molar enthalpies (H^E) of six binary systems at T = 298.15 K under atmospheric pressure. The systems investigated include (1-hexanol + 2-octanone), (1-octanol + 2-octanone), (1-hexanol + octanoic acid), (1-hexanol + hexanoic acid), {N,N-dimethylformamide (DMF) + hexanoic acid}, and {dimethyl sulfoxide (DMSO) + hexanoic acid}. The values of excess molar enthalpies are all positive except for the DMSO- and the DMF-containing systems. In the 1-hexanol with hexanoic acid or octanoic acid systems, the maximum values of H^E are located around the mole fraction of 0.4 of 1-hexanol, but the H^E vary nearly symmetrically with composition for other four systems. In addition to the modified Redlich–Kister and the NRTL models, the Peng–Robinson (PR) and the Patel–Teja (PT) equations of state were used to correlate the excess molar enthalpy data. The modified Redlich–Kister equation correlates the H^E data to within about experimental uncertainty. The calculated results from the PR and the PT are comparable. It is indicated that the overall average absolute relative deviations (AARD) of the excess enthalpy calculations are reduced from 18.8% and 18.8% to 6.6% and 7.0%, respectively, as the second adjustable binary interaction parameter, k_bij, is added in the PR and the PT equations. Also, the NRTL model correlates the H^E data to an overall AARD of 10.8% by using two adjustable model parameters.     

QSAR studies of some side chain modified 7-chloro-4-aminoquinolines as antimalarial agents

The quantitative structure–activity relationship (QSAR) analyses were carried out for a series of new side chain modified 4-amino-7-chloroquinolines to find out the structural requirements of their antimalarial activities against both chloroquine sensitive (HB3) and resistant (Dd2) Plasmodium falciparum strain. The statistically significant best 2D QSAR models for Dd2, having correlation coefficient (r²) = 0.9188 and cross validated squared correlation coefficient (q²) = 0.8349 with external predictive ability (pred_r²) = 0.7258 and for HB3, having r² = 0.9024, q² = 0.8089 and pred_r² = 0.7463 were developed by multiple linear regression coupled with genetic algorithm (GA–MLR) and stepwise (SW–MLR) forward algorithm, respectively. The results of the present study may be useful on the designing of more potent analogues as antimalarial agents.     

QSAR,docking studies of 1,3-thiazinan-3-yl isonicotinamide derivatives for antitubercular activity

The enzyme – enoyl acyl carrier protein reductase (enoyl ACP reductase) is a validated target for antitubercular activity. Inhibition of this enzyme interferes with mycolic acid synthesis which is crucial for Mycobacterium tuberculosis cell growth. In the present work 2D and 3D quantitative structure activity relationship (QSAR) studies were carried out on a series of thiazinan–Isoniazid pharmacophore to design newer analogues. For 2D QSAR, the best statistical model was generated using SA-MLR method (r² = 0.958, q² = 0.922) while 3D QSAR model was derived using the SA KNN method (q² = 0.8498). These studies could guide the topological, electrostatic, steric, hydrophobic substitutions around the nucleus based on which the NCEs were designed. Furthermore, molecular docking was performed to gauze the binding affinity of the designed analogues for enoyl ACP reductase enzyme. Amongst all the designed analogues the binding energies of SKS 01 and SKS 05 were found to be −5.267 kcal/mol and −5.237 kcal/mol respectively which was comparable with the binding energy of the standard Isoniazid (−6.254 kcal/mol).     

Preparation of aqueous crosslinked dispersions of functionalized poly(d,l-lactic acid) with a thermomechanical method

Aqueous crosslinked microparticle dispersions were prepared from a copolymer of d,l-lactic acid, 1,4-butanediol, and itaconic acid with a thermomechanical method. The copolymer was prepared in one step polycondensation reaction using Sn(Oct)₂ as a catalyst. A polymer with M_n of 2800 g mol^?1 and a molecular weight distribution of 1.41 was obtained (as determined by SEC), that contained double bonds introduced by the itaconic acid monomer units (6 mol-%, as determined by NMR). Crosslinking ability of the prepared copolymer was demonstrated in bulk by adding a thermal initiator and altering amounts of ethylene glycol dimethacrylate (EGDMA) crosslinking agent into molten polymer at 60–150 °C. A crosslinked gel was formed in less than 15 min at 80 °C when 10 wt.% of EGDMA was added and benzoyl peroxide (BPO) was used as the initiator. Aqueous dispersions were prepared of the non-crosslinked copolymer with a thermomechanical method that involved slow addition of aqueous polyvinyl alcohol (PVA) solution into molten copolymer at 60 °C under shear. Dispersions were prepared with 10 wt.% of EGDMA and 2 wt.% of BPO. Crosslinking of the dispersed microparticles was achieved by heating the dispersions at 80 °C for 30 or 60 min. The dispersions were characterized by SEM, DSC, TGA, FT-IR, solid state NMR, and gel content measurements. The effect of crosslinking was clearly seen in SEM images of films cast from the dispersions. The films cast from non-crosslinked dispersions had smooth morphology whereas in films cast from crosslinked dispersions separate spherical particles were observed. During the crosslinking reactions, glass transition temperatures increased (as determined by DSC), thermal stability of the samples increased (as determined by TGA), and the gel content of the samples increased.     

Construction,calibration and testing of a micro-combustion calorimeter

An isoperibolic micro-combustion calorimeter was designed, built and set up in our laboratory, taking as base a 1107 Parr combustion bomb of 22 cm³ of volume. Taken into account the geometrical form of the bomb, it was designed and constructed a vessel and a submarine chamber in brass. All of the pieces of the calorimeter were chromium-plated to reduce heat loss by radiation. The calorimeter was calibrated by using pellets of standard benzoic acid (mass approximate of 40 mg) leading to the energy equivalent of ε(calor) = (1283.8 ± 0.6) J · K⁻¹. In order to test the calorimeter, combustion experiments of salicylic acid were performed leading to a value of combustion energy of Δ_cu^∘ = −(21,888.8 ± 10.9) J · g⁻¹, which agrees with the reported literature values. The combustion of piperonylic acid was carried out as a further test leading to a value of combustion energy of Δ_cu^∘ = −(20,215.9 ± 10.4) J · g⁻¹ in accordance with the reported literature value. The uncertainty of the calibration and the combustion of salicylic acid and piperonylic acid was 0.05%.     

Thermodynamic study on the sublimation of six methylnitrobenzoic acids

The Knudsen mass-loss effusion technique was used to measure the vapour pressures at different temperatures of the following six compounds: 2-methyl-3-nitrobenzoic acid, between T =  357.16 K and T =  371.16 K; 2-methyl-6-nitrobenzoic acid, between T =  355.16 K and T =  369.16 K; 3-methyl-2-nitrobenzoic acid, between T =  371.16 K and T =  385.14 K; 3-methyl-4-nitrobenzoic acid, between T =  363.21 K and T =  379.16 K; 4-methyl-3-nitrobenzoic acid, between T =  363.10 K and T =  377.18 K; 5-methyl-2-nitrobenzoic acid, between T =  355.18 K and T =  371.08 K. From the temperature dependence of the vapour pressure, the standard molar enthalpies of sublimation were derived by the Clausius–Clapeyron equation and the molar entropies of sublimation at equilibrium pressures were calculated. Using estimated values for the heat capacity differences between the gas and the crystal phases of the studied compounds the standard, p^o =  10⁵Pa, molar enthalpies Δ_cr^gH_m^o, entropies Δ_cr^gS_m^oand Gibbs energies Δ_cr^gG_m^oof sublimation at T =  298.15 K, were derived:     

Stable iminonitroxide biradicals: Building blocks for organic heterospin,heteromolecular complexes

A stable cationic biradical has been designed and synthesized, and its magnetic property and crystal structure have been examined. An iminonitroxide derivative of 3,5-disubstituted pyridine (1) with a triplet ground state has been cationized by a reaction with methyl trifluoromethanesulfonate (MeTfO), which gave a salt of N-methylated pyridinium 2⁺, 2⁺ · TfO⁻. The ground state of the cation 2⁺ has been found to be triplet with 2J/k_B = 7.5 K from magnetic susceptibility measurements for 2⁺ · TfO⁻ in a magnetically diluted organic matrix. The magnetic susceptibility of neat crystalline solids of 2⁺ · TfO⁻ has been explained by an exchange coupling model based on the X-ray crystal structure. It is well known that the energy preference for a high-spin ground state for a m-phenylene coupling unit is disturbed by heteroatomic substitution and an ionic charge. The present experimental results show that the high-spin preference in 1 is little affected by the ionic charge in 2⁺. The ground-state triplet biradical serves as building blocks for molecule-based magnets of S > 1/2 of molecular assemblages based on electrostatic interactions between molecular ions.     

Electronic structures,photophysical properties,and electrochemistry of ruthenium(II)(bpy)2 pyridylimidazole complexes

The properties of Ru^II complexes involving the imidazole moiety are discussed. Complexes [Ru(bpy)₂(L)]²⁺ [bpy = 2,2′-bipyridine, L = 2-(2′-pyridyl)imidazole (2-pimH) and 4-(2′-pyridyl)imidazole (4-pimH)] have been synthesized and fully characterized. Reduction potentials are 0.76 V vs. Fc⁺/Fc⁰ for both complexes in acetonitrile solution, and the deprotonated complexes undergo irreversible electrochemical oxidation at 0.38 V vs. Fc⁺/Fc⁰. Density functional theory (DFT) calculations suggest that oxidation of the protonated complexes is primarily metal-based and that of the deprotonated complexes is ligand-centered. The pK_a of the 4-pimH complex was found to be 9.7 ± 0.2; the pK_a of the 2-pimH complex is 7.9 ± 0.2. Luminescence lifetimes (L = 4-pimH, 277 ns; 2-pimH, 224 ns; 4pim^?, 40 ns; 2pim^?, 34 ns in 5% methanol/water solution) combined with quantum yield data and acid–base behavior suggest that the non-coordinated imidazole nitrogen tunes deactivation pathways.     

Crystal structures and magnetic properties of complexes of M(NO3)2; M = MnII,CoII, NiII,and CuII,with pyridine ligands carrying an aminoxyl radical

Four complexes of M(NO₃)₂(4NOPy-OMe)₂, (4NOPy-OMe = 4-(N-tert-butyloxylamino)-2-(methoxymethylenyl)pyridine, and M = Mn^II, 1; Co^II, 2; Ni^II, 3; Cu^II, 4), were prepared and fully characterized. X-ray single crystal analysis reveals that four complexes are isostructural. The molecular structures are distorted octahedral in which the methoxy oxygen atoms coordinate to the metal ion by trans-configuration while the pyridyl nitrogen atoms and the nitrate oxygen atoms coordinate by cis-configuration. The magnetic properties of all complexes were investigated by SQUID magneto/susceptometry. Temperature dependence of the molar magnetic susceptibilities in the temperature range of 2–300 K indicated that the magnetic coupling between aminoxyl radicals and metal ion was antiferromagnetic in the complex 1 and were ferromagnetic in the complexes 2–4. The quantitative analysis based on the spin Hamiltonian, H = −2J(S₁S_M + S_MS₂) yielded the best fit as J/k_B = −13.4 ± 0.1 K, g = 1.94 ± 0.002, and θ = −0.78 ± 0.02 K for the complex 1, J/k_B = 48.7 ± 2.1 K, g = 2.07 ± 0.02, and θ = −2.83 ± 0.41 K for the complex 3 (the data in the temperature range 300–50 K were used), and J/k_B = 57.0 ± 1.2 K, g = 2.002 ± 0.004, and θ = −9.8 ± 0.1 K for the complex 4.     

Exploration of interaction zones of β-tubulin colchicine binding domain of helminths and binding mechanism of anthelmintics

Numerous studies postulated the possible modes of anthelmintic activity by targeting alternate or extended regions of colchicine binding domain of helminth β-tubulin. We present three interaction zones (zones vide −1 to −3) in the colchicine binding domain of Haemonchus contortus (a helminth) β-tubulin homology model and developed zone-wise structure-based pharmacophore models coupled with molecular docking technique to unveil the binding hypotheses. The resulted ten structure-based hypotheses were then refined to essential three point pharmacophore features that captured recurring and crucial non-covalent receptor contacts and proposed three characteristics necessary for optimal zone-2 binding: a conserved pair of H bond acceptor (HBA to form H bond with Asn226 residue) and an aliphatic moiety of molecule separated by 3.75 ± 0.44 Å. Further, an aliphatic or a heterocyclic group distant (11.75 ± 1.14 Å) to the conserved aliphatic site formed the third feature component in the zone-2 specific anthelmintic pharmacophore model. Alternatively, an additional HBA can be substituted as a third component to establish H bonding with Asn204. We discern that selective zone-2 anthelmintics can be designed effectively by closely adapting the pharmacophore feature patterns and its geometrical constraints.     

The thermodynamics of formation,molar heat capacity,and thermodynamic functions ofZrTiO4(cr)

As part of an ongoing study of titanate-based ceramic materials for the disposal of surplus weapons-grade plutonium, we report thermodynamic properties of a sample ofzirconium titanate (ZrTiO₄) quenched from a high-temperature synthesis. The standard enthalpy of formationΔ_fH_m^o was obtained by using high-temperature oxide-melt solution calorimetry. The molar heat capacity C_{p, m}was measured fromT =  13 K to T =  400 K in an adiabatic calorimeter and extrapolated toT =  1800 K by using an equation fitted to the low-temperature results. The results atT =  298.15 K areΔ_fH_m^o =  − (2024.1  ±  4.5)kJ · mol ^− 1,Δ₀^TS_m^o =  (116.71  ±  0.31 )J · K ^− 1· mol ^− 1, andΔ_fG_m^o =  − (1915.8  ±  4.5 )kJ · mol ^− 1; the molar entropy includes a contribution of 2 R ln2 to account for the random mixing of Zr^4 + and Ti^4 + on a four-fold crystallographic site. Values for the standard molar Gibbs energies and enthalpies of formation of ZrTiO_4,Δ_fG_m^oandΔ_fH_m^o , and for the free energies and enthalpies for the reaction to form ZrTiO₄(cr) from ZrO₂(cr) and TiO₂(cr), are tabulated over the temperature interval, 0 ⩽(T / K)⩽ 1800. From these results, we conclude that ZrTiO₄is not stable with respect to (ZrO₂ +  TiO₂) at T =  298.15 K, but becomes so at T =  (1250  ±  150) K.     

Synthesis,crystal structure,and coordination properties of a helical peptide having β-(3-pyridyl)-l-alanine and l-glutamic acid residues

A novel helical peptide containing β-(3-pyirdyl)-l-alanine (Pal) and l-glutamic acid (Glu) residues has been designed and successfully prepared as a model ligand of metalloenzyme active sites. The helical peptide, Boc-Leu-Aib-Glu-Leu-Leu-Pal-Aib-Leu-OEt (1) (Boc = tert-butoxycarbonyl, Aib = 2-aminoisobutylic acid) yields fine crystals as an acetnitrile solvate. The metal ion binding affinities of 1 were tested for CoCl₂ using UV/vis, CD, Raman, and ¹H NMR spectroscopies. The non-linear fitting calculations have revealed the 1:1 complex for CoCl₂ with the binding constant 3.6 (±0.7) × 10² M⁻¹.     

Standard Gibbs energy of formation of platinic acid H2Pt(OH) 6in the crystalline state

Heat capacity of platinic acid, hydrogen hexahydroxyplatinate(IV)H₂Pt(OH)₆ , was measured from T =  7 K toT =  310 K by means of adiabatic calorimetry. The standard entropy and the standard Gibbs energy of formation of platinic acid in the crystalline state were determined to be 176.5  ±  3.6 J · K ^− 1· mol ^− 1and  − 988.8  ±  3.8 kJ · mol ^− 1, respectively.     

The vapour pressures of saturated aqueous solutions of magnesium,calcium, nickel and zinc acetates and molar enthalpies of solution of magnesium,calcium, zinc and lead acetates

Vapour pressures of water over saturated solutions of magnesium, calcium, nickel and zinc acetates were determined as a function of temperature. The vapour pressures served to evaluate the water activities, osmotic coefficients and molar enthalpies of vaporization. Molar enthalpies of solution of magnesium acetate tetrahydrate,Δ_solH_m (T =  294.71K ;m =  0.01 mol · kg ^− 1)  =  − (15.65  ±  0.97)kJ · mol ^− 1; calcium acetate,Δ_solH_m (T =  297.18K ;m =  0.01 mol · kg ^− 1)  =  − (28.15  ±  0.28)kJ · mol ^− 1; zinc acetate dihydrate,Δ_solH_m (T =  297.36K ;m =  0.01 mol · kg ^− 1)  =  − (22.49  ±  0.90)kJ · mol ^− 1and lead acetate trihydrate,Δ_solH_m (T =  297.36K ;m =  0.0086 mol · kg ^− 1)  =  (22.46  ±  0.94)kJ · mol ^− 1, were determined calorimetrically.     

Novel method for the preparation of carbon supported nano-sized amorphous ruthenium oxides for supercapacitors

Nanostructured amorphous RuO₂ · xH₂O/C composite materials are prepared via a modified sol–gel process using glycolic acid. The glycolate anion, which dissociates from glycolic acid at pH 7, behaves as a stabilizer by adsorbing onto the RuO₂ · xH₂O surface, thus resulting in particles with a size of about 2 nm. As evidenced by zeta potential measurements, the surface charge of RuO₂ · xH₂O becomes more electronegative as the amount of glycolic acid increases. After heat treatment at 160 ^oC to remove the stabilizer, RuO₂ · xH₂O/C is found to exhibit an amorphous structure. The specific capacitance of RuO₂ · xH₂O/C particles (40 wt% Ru) prepared in the presence of glycolic acid (0.3 g L⁻¹) is 462 F g⁻¹, which is 30% higher than that of the material prepared in the absence of glycolic acid. Both the nanosized particles and the amorphous structure mainly contribute to this increase in the specific capacitance.     

Structural characterization,molecular dynamics,dielectric and spectroscopic properties of tetrakis(pyrazolium) bis(μ2-bromo-tetrabromobismuthate(III)) dihydrate, [C3N2H5]4[Bi2Br10]·2H2O

The structure of [C₃N₂H₅]₄[Bi₂Br₁₀]·2H₂O, (PBB) was determined by single crystal X-ray diffraction at 100 K. It crystallizes in the monoclinic space group C2/m, with a = 12.992(4) Å, b = 16.326(5) Å, c = 8.255(3) Å, β = 108.56°(3), V = 1659.9(9) Å³ and Z = 2. The structure consists of discrete binuclear [Bi₂Br₁₀]⁴⁻ anions, ordered pyrazolium cations and water molecules. The crystal packing is governed by strong N–H⋯O and weak O–H⋯Br hydrogen bonds. A sequence of structural phase transitions in PBB was established on the basis of differential scanning calorimetry and dilatometric studies. Two reversible first-order phase transitions were found: (I → II) at 381/371 K (on heating/cooling) and (II → III) at 348/338 K. Dielectric response near both phase transitions is characteristic of crystals with the “plastic-like” phases. Over the phase III a low frequency dielectric relaxator is disclosed. The possible molecular motions in the PBB compound are characterized by the ¹H NMR studies. The infrared spectra of polycrystalline compound in the temperature range 300–380 K are reported for the region 4000–400 cm⁻¹. The observed spectral changes through the structural phase transition III → II are attributed to an onset of motion both of the pyrazolium cations and water molecules.