Tautomeric transformations of arylidenebarbiturates in solutions

IR and UV spectroscopy and quantum chemistry were employed to investigate the structure of arylidenebarbiturates able to undergo tautomeric transformations. The composition of tautomeric mixtures depends on the properties of the solvent and on the concentrations of the solutions. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 4, pp. 769–775, April, 1997.     

An NMR study of hydrogen bonding in some azo dyestuffs

The ¹H, ¹³C, and ¹⁵N NMR data reported for compounds 1–4 show that in DMSO solutions all of them exist in the azo form only and do not participate in the azo–hydrazoimine equilibrium. The NMR data for compounds 1 and 2 show the presence of a weak hydrogen bond for the non-protonated forms, between N10 and the 2-NHCH₃ proton. All compounds have also been studied in TFA solutions in which they are protonated. The site of protonation of 1, 2 and 3 is determined to be at N10 in TFA solutions. These results are supported by some ab initio GIAO-CHF molecular orbital calculations.     

Tautomeric equilibria in the reaction products of asymmetric 1,3-diamines with β-dicarbonyl compounds

The reaction products of 1,3-butanediamine and 2-methyl-2,4-pentanediamine with β-keto aldehydes were shown by ¹H and ¹³C NMR spectroscopy to exist as tautomeric mixtures in solutions, comprising one cyclic and two open-chain forms due to the non-equivalence of the amino groups. The chain products exist as Z- and E-isomers. After equilibration, the products from 1,3-butanediamine contain relatively less of the cyclic form than those from 2-methyl-2,4-pentanediamine. The products of 2-methyl-2,4-pentanediamine with p-substituted aroylacetaldehydes, exhibit a linear correlation between log K of the ring-chain equilibria and Hammett's σ values of the aromatic ring substituents. α-Substitution of β-keto aldehydes notably increased the relative amounts of the chain E-isomers in their condensation products and also resulted in the formation of two diastereomers for each of the cyclic products. No ring-chain equilibria were observed in the products of 1,3-butanediamine and 2-methyl-2,4-pentanediamine with β-diketones, β-keto esters, or β-keto amides.     

Controlled Tautomeric Switching in Azonaphthols Tuned by Substituents on the Phenyl Ring

A series of new tautomeric azonaphthols are synthesized and the possibilities for molecular switching are investigated using molecular spectroscopy, X‐ray analysis and density functional theory quantum chemical calculations. Two opposite effects that influence switching are studied: attaching a piperidine sidearm, and adding substituents to the phenyl ring. On the one hand, the attached piperidine moiety stabilizes the enol form leading to a controlled shift of the equilibrium upon protonation. On the other hand, the relative stability of the azonaphthol tautomers strongly depends on the effects of the substituents on the phenyl ring: electron donors tend to stabilize the enol tautomer, whereas electron acceptors lead to stabilization of the keto form. However, these effects do not shift fully the equilibrium towards either of the tautomers. Nevertheless, the effect of the substituents can be an additional tool to affect the switching between “on” and “off” states. Electron‐withdrawing substituents stabilize the keto form and impede switching to the off state, whereas electron donors stabilize the enol form. The effect of the piperidine unit is dominant overall, and with strongly electron‐withdrawing substituents at the phenyl ring, the enol form exists as a zwitterion.     

Classical versus redox tautomerism: substituent effects on the keto/enol and sulfoxide/sulfenic acid equilibria

MP2/6-311+G** ab initio calculations have been carried out for a classical example of tautomerism, the keto/enol [RCOCH₃/RC(OH)CH₂] and an example of redox tautomerism, the sulfoxide/sulfenic acid [RS(O)H/RSOH]. Eleven R substituents have been examined. Both equilibria show proportional energies and similar dependence on the Swain-Lupton Fand Rparameters.     

Radical addition to the vinyl CC bond: Quantum chemistry model of the reaction

Transition states of radical addition of C and O centered radicals to vinyl monomers were studied by MNDO UHF. Linear relationships between activation barriers and the enthalpies of addition were found in all reaction series. To expose factors of reactivity, calculated activation barriers were subjected to energy partitioning procedure, and an attempt was made to correlate those parts with monomolecular and bimolecular indexes of reactivity (such as deformation energies of monomers, CT‐energies, etc). Shown that a satisfactory 2‐parameter linear correlation can be built. Problems of PMO theory application to considered class of reactions were discussed and alternative method of calculation of CT‐energies by using monomolecular parameters proposed. Resulting scheme of reactivity applied to existing experimental data on reactivity in radical addition reactions, optimized parameters of large group of reagents tabulated. © 2002 Wiley Periodicals, Inc. Int J Quantum Chem, 2002     

Dimer Mechanism for the Tautomeric Conversion of 4-Amino-2-oxopyrimidine

Values of the enthalpy (ΔH), atomic charges (q_i), and bond orders (P_ij) for six tautomeric forms of 4-amino-2-oxopyrimidine have been calculated by the semiempirical AM1 quantum-chemical method. It was found that the most stable of these is 4-amino-2-oxo-1H-pyrimidine (cytosine). By analogy with complementary pairs of nucleotide bases, the tautomeric conversion of cytosine and other oxo forms can come about via a dimeric intermolecular mechanism. A novel interpretation is proposed for the conversion of cytosine to 4-amino-2-oxo-3H-pyrimidine as a result of a 1H-3H two stage proton transfer.__________Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 4, pp. 564–568, April, 2005.     

Combining Open-Shell Verdazyl Environment and Co(II) Spin-Crossover: Spinmerism in Cobalt Oxoverdazyl Compound

The spin states of a Co(II) oxoverdazyl compound are investigated by means of wavefunction-based calculations. Within a ca. 233 K energy window, the ground state and excited states display a structure-sensitive admixture of low-spin S_M=1/2 in a dominant high-spin S_M=3/2 Co(II) ion as indicated by the localized molecular orbitals. The puzzling spin zoology that results from the coupling between open-shell radical ligands and a spin-crossover metal ion gives rise to this unusual scenario, which extends the views in molecular magnetism. In agreement with experimental observation, the low-energy spectroscopy is very sensitive to deformations of the coordination sphere, and a growing admixture of Co(II) low-spin is evidenced from the calculations. In analogy with mesomerism that accounts for charge delocalization, entanglement combines different local spin states to generate a given total spin multiplicity, a spinmerism phenomenon.     

Tautomeric Switching and Metal‐Cation Sensing of Ligand‐Equipped 4‐Hydroxy‐/4‐oxo‐1,4‐dihydroquinolines

Novel 4‐hydroxyquinoline (4HQ) based tautomeric switches are reported. 4HQs equipped with coordinative side arms (8‐arylimino and 3‐piperidin‐1‐ylmethyl groups) were synthesized to access O‐ or N‐selective chelation of Zn²⁺ and Cd²⁺ ions by 4HQ. In the case of the monodentate arylimino group, O chelation of metal ions induces concomitant switching of phenol tautomer to the keto form in nonpolar or aprotic media. This change is accompanied by selective and highly sensitive fluorometric sensing of Zn²⁺ ions. In the case of the bidentate 8‐(quinolin‐8‐ylimino)methyl side arm, NMR studies in CD₃OD indicated that both Cd²⁺ and Zn²⁺ ions afford N chelation for 4HQ, coexisting with tautomeric switching from quinolin‐4(1H)‐one to quinolin‐4‐olate. In corroboration, UV/Vis‐monitored metal‐ion titrations in toluene and methanol implied similar structural changes. Additionally, fluorescence measurements indicated that the metal‐triggered tautomeric switching is associated with compound signaling properties. The results are supported by DFT calculations at the B3LYP 6‐31G* level. Several X‐ray structures of metal‐free and metal‐chelating 4HQ are presented to support the solution studies.     

Tautomeric crown-containing chemosensors for alkali-earth metal cations

Crown-containing arylimines of 5-hydroxy- and 5-hydroxy-6-nitro-2,3-diphenylbenzo[b]furan-4-carbaldehydes were synthesized and their structure, spectral, luminescent, and complexing properties were studied by means of ¹H and ¹³C NMR, IR, UV, and mass-spectrometry. In solution, these compounds exist as equilibrium mixtures of benzenoid and quinoid tautomers. The relative concentration of the quinoid form increases in the order of solvents: toluene, acetonitrile, 2-propanol, chloroform. The presence in the benzo[b]furan moiety of a strong withdrawing 6-NO₂ group favors stabilization of the quinoid tautomer. This finding is in accord with the results of the DFT B3LYP/6-311++g(d,p) calculations. Complexation of 5-hydroxy-6-nitro-2,3-diphenyl-1-benzofuran-4-carbaldehyde crown-containing imines with alkali and alkali-earth metal ions shifts the tautomeric equilibrium to the quinoid forms and is accompanied by blue shifts of the emission spectra. The Schiff bases obtained represent a new type of fluorescent tautomeric chemosensor for Mg²⁺, Ca²⁺ (benzo-15-crown-5 derivative), and Ba²⁺ (benzo-18-crown-6 derivative) displaying diagnostic changes in both absorption and emission spectra.     

Ab initio molecular dynamics study of the keto-enol tautomerism of acetone in solution.

We have studied the keto-enol interconversion of acetone to understand the mechanism of tautomerism relevant to numerous organic and biochemical processes. Applying the ab initio metadynamics method, we simulated the keto-enol isomerism both in the gas phase and in the presence of water. For the gas-phase intramolecular mechanism we show that no other hydrogen-transfer reactions can compete with the simple keto-enol tautomerism. We obtain an intermolecular mechanism and remarkable participation of water when acetone is solvated by neutral water. The simulations reveal that C deprotonation is the kinetic bottleneck of the keto-enol transformation, in agreement with experimental observations. The most interesting finding is the formation of short H-bonded chains of water molecules that provide the route for proton transfer from the carbon to the oxygen atom of acetone. The mechanistic picture that emerged from the present study involves proton migration and emphasizes the importance of active solvent participation in tautomeric interconversion.     

Determination of the “Privileged Structure” of 8-Hydroxyquinoline

An accurate semi-experimental equilibrium structure of 8-hydroxyquinoline (8-HQ) has been determined combining experiment and theory. The cm-wave rotational spectrum of 8-HQ was recorded in a pulsed supersonic jet using broadband dual-path reflection and narrowband Fabry-Perot-type resonator Fourier-transform microwave spectrometers. Accurate rotational and quartic centrifugal distortion constants and ¹⁴N quadrupole coupling constants are determined. Rotational constants of all ¹³C, ¹⁸O and ¹⁵N singly substituted isotopologues in natural abundance and those of a chemically synthesized OD isotopologue were used to obtain geometric parameters for all the heavy atoms and the hydroxyl hydrogen from a number of structure determination models. Theoretical approaches allowed for the determination of a semi-experimental equilibrium structure, in which computed rovibrational and electronic corrections were utilized to convert vibrational ground state constants into equilibrium constants. Despite the molecule having only a horizontal plane of symmetry and possessing 11 individual heavy atoms, microwave spectroscopy has allowed for a reliable and accurate structure determination. A mass dependent, structure was determined and proved to be equally reliable by comparison with the B3LYP-D3(BJ)/aVTZ equilibrium structure.     

Structure of quinoline-8-aldehyde S-methyl thiosemicarbazone dihydrochloride

It is established that in quinoline-8-aldehyde S-methyl thiosemicarbazone dihydrochloride the thiosemicarbazide fragment has cis-configuration of terminal nitrogen atoms, similarly to that found in its coordination compounds with copper(II) and palladium(II). Original Russian Text Copyright ? 2009 by M. Botoshanskii, P. N. Bourosh, M. D. Revenko, I. D. Korzha, Yu. A. Simonov, and T. Panfilie __________ Translated from Zhurnal Strukturnoi Khimii, Vol. 50, No. 1, pp. 188–191, January–February, 2009.     

An ab ititio molecular orbital study of thymine radicals

Ab initio calculations at the STO-3G level have been carried out on the six thymine radicals, 1-yl, 6-yl, 5-yl, 7-yl, 4-hydroxyl and the anion. The results have been compared with those from ESR studies. Contribution No. 175 from the Solid State and Structural Chemistry Unit.     

Triclabendazole: An Intriguing Case of Co‐existence of Conformational and Tautomeric Polymorphism

The crystal polymorphism of the anthelmintic drug, triclabendazole ( TCB ), is described. Two anhydrates (Forms I and II), three solvates, and an amorphous form have been previously mentioned. This study reports the crystal structures of Forms I ( 1 ) and II ( 2 ). These structures illustrate the uncommon phenomenon of tautomeric polymorphism. TCB exists as two tautomers A and B. Form I (Z′=2) is composed of two molecules of tautomer A while Form II (Z′=1) contains a 1:1 mixture of A and B. The polymorphs are also characterized by using other solid‐state techniques (differential scanning calorimetry (DSC), thermal gravimetric analysis (TGA), PXRD, FT‐IR, and NMR spectroscopy). Form I is the higher melting form (m.p.: 177 °C, ΔH_f=≈105±4 J g^?1) and is the more stable form at room temperature. Form II is the lower melting polymorph (m.p.: 166 °C, ΔH_f=≈86±3 J g^?1) and shows high kinetic stability on storage in comparison to the amorphous form but it transforms readily into Form I in a solution‐mediated process. Crystal structure analysis of co‐crystals 3 , 4 , 5 , 6 , 7 , 8 , 9 , 10 , 11 further confirms the existence of tautomeric polymorphism in TCB . In 3 and 11 , tautomer A is present whereas in 4 , 5 , 6 , 7 , 8 , 9 , 10 the TCB molecule exists wholly as tautomer B. The DFT calculations suggest that the optimized tautomers A and B have nearly the same energies. Single point energy calculations reveal that tautomer A (in Form I) exists in two low‐energy conformations, whereas in Form II both tautomers A and B exist in an unfavorable high‐energy conformation, stabilized by a five‐point dimer synthon. The structural and thermodynamic features of 1 , 2 , 3 , 4 , 5 , 6 , 7 , 8 , 9 , 10 , 11 are discussed in detail. Triclabendazole is an intriguing case in which tautomeric and conformational variations co‐exist in the polymorphs.