Study on interactions of endocrine disruptors with estrogen receptor-beta using fluorescence polarization.

In this study, we developed a rapid, simple and homogeneous human recombinant estrogen receptor-beta (hrER-beta) binding assay method using fluorescence polarization (FP) by applying a fluorescent ligand, fluorescein-labeled estradiol (F-E2). A Scatchard plot and a Hill plot analysis of the saturation binding assay using F-E2 and hrER-beta were studied. F-E2 showed a high affinity for hrER-beta, the dissociation constant was 5.53 nM, indicating that F-E2 is applicable to the hrER-beta binding assay. Competitive binding assays using F-E2, in which the FP values decreased upon the addition of compounds (competitors) were carried out to evaluate the binding characteristics of compounds with and without biological activities to hrER-beta. Twenty-one compounds, such as hormones, pharmaceuticals, industrial chemicals and phytoestrogens, were examined. The obtained sigmoidal inhibition curves were transformed into pseudo-Hill plots and the concentrations at 50% inhibition (IC50) and Hill coefficients, the degree of cooperativity in ER-ligand binding, were obtained from the regression equations. Antagonists exhibited larger Hill coefficients than agonists, showing the correlation between the Hill coefficients and the estrogenic/antiestrogenic activities.     

Flow-injection analysis chemiluminescence detection combined with microdialysis sampling for studying protein binding of drug

The bovine serum album binding of streptomycin sulfate was studied in vitro using the technique of microdialysis combined with flow-injection analysis-chemiluminescence detection. The principle of the determination of streptomycin sulfate is that it increases the radiation emitted during the chemiluminescence oxidation of luminol by potassium hexacyanoferrate (III) in sodium hydroxide medium. The drug and protein were mixed in different molar ratios in 0.067 M phosphate buffer, pH 7.4, and incubated at 37 degrees C in a water bath. The microdialysis probe was utilized to sample the mixed solution at a perfusion rate of 5 mul min(-1). The concentration of unbound streptomycin sulfate in the microdialysate was determined by FIA-CL. In vitro recovery of streptomycin sulfate under experimental conditions was 22%. The data obtained by the present microdialysis-FI-CL system was analyzed using the Scatchard analysis and Klotz plot. The results show that the Scatchard plot and Klotz plot are linear, showing that studied drug has only one type of binding sites. The estimated binding parameters agreed well with literature values.     

Glucocorticoid-mediated alteration in growth factor binding and action: analysis of the binding change.

The addition of the glucocorticoid analog dexamethasone (DX) to serum-free cultures of human fibroblasts caused a twofold enhancement of the mitogenic response to epidermal growth factor (EGF), although DX by itself was not mitogenic. A basis for this effect was suggested by studies showing that DX also increased the cellular binding of 125I-EGF. DX increased the ability of the cells to bind 125I-EGF only at low physiological concentrations of this polypeptide. Thus, data from 125 I-EGF binding to cells incubated without DX produced a linear Scatchard plot, whereas the data from 125I-EGF binding to DX-treated cells led to an upwardly curvilinear Scatchard plot. Measurements of 125I-EGF association with the cell surface and cytoplasm indicated that this binding change involved an alteration of cell surface EGF receptors. The binding change appeared not to involve negatively cooperative interactions between EGF receptors, nor a change in the number of receptors. The binding alteration could be explained by a model in which DX converted 25--30% of the cell surface EGF receptors to a form having a fourfold increased affinity.     

Development of a quinoxaline-based fluorescent probe for quantitative estimation of protein binding site polarity

The compound 2-[(1E)-2-(1H-pyrrol-2-yl)ethenyl]-quinoxaline (PQX) is a promising fluorescent chromophore for the estimation of protein binding site polarity, due to its full-color solvatochromic fluorescence. A linear relationship was obtained between the peak emission wavenumber and E(T)(N) (normalized solvent polarity). The BSA binding site polarity was estimated from the solvatochromic plot.     

Capillary electrophoresis study of human serum albumin binding to basic drugs

Summary The applicability of capillary electrophoresis/frontal analysis (CE/FA) for determining the binding constants of the drugs propranolol (PRO) and verapamil (VER) to human serum albumin (HSA) was investigated. After direct hydrodynamic injection of a drug-HAS mixture solution into a coated capillary (32 cm × 50 μm i.d.), the basic drug was eluted as a zonal peak with a plateau region under condition of phosphate buffer (pH 7.4; ionic strength 0.17) at 12 kV positive running voltage. The unbound drug concentrations measured from the plateau peak heights had good correlation coefficients,r>0.999. Employing the Scatchard plot, the Klotz plot and nonlinear regression, the drug protein binding parameters, the binding constant and the number of binding sites on one protein molecule, were obtained. The binding constant obtained was compared to a reported equilibrium dialysis result and they are basically in good agreement.     

Determination of stability constants of a copper/citric acid complex by ion-exchange chromatography and atomic absorption spectrometry

The method is based on separation of free copper ion from the complex by ion-exchange chromatography and determination of the free copper ions by atomic absorption spectrometry. Parameters that influence the separation and determination of the free metal are evaluated. Calculation of the conditional stability constant and the number of binding sites per citric acid (L) molecule was based on a Scatchard plot. The conditional stability constants found for the CuL^2? complex were pK = 5.04 at pH 7.0 and pK = 4.76 at pH 6.2 and ionic strength 0.10 M. The number of binding sites per molecule was unity.     

New methods for data analysis of isothermal titration calorimetry

Heat divided by ligand concentration vs. heat, similar to the Scatchard plot, was introduced to obtain the equilibrium constant (K) and the enthalpy of binding (DH) using isothermal titration calorimetry data. Values of K and DH obtained by this linear pseudo-Scatchard plot for a system with a set of independent binding sites (such as binding fluoride ions on urease and monosaccharide methyl a-D-mannopyranoside on concavalin A) were remarkably like that obtained from a normal fitting Wiseman method and other our technical methods. On applying this graphical method to study the binding of copper ion on myelin basic protein (MBP), a concave downward curve obtained was consistent with the positive cooperativity in the binding. A graphical fitting by simple method for determination of thermodynamic parameters was also introduced. This method is general, without any assumption and restriction made in previous method. This general method was applied to the product inhibition study of adenosine deaminase. This revised version was published online in July 2006 with corrections to the Cover Date.     

Application of cyclodextrin-mediated capillary electrophoresis to simultaneously determine the apparent binding constants and thermodynamic parameters of naphthalenesulfonate derivatives

Application of capillary electrophoresis (CE) to simultaneously determine the apparent binding constants and thermodynamic parameters for six positional and structural naphthalenesulfonate derivatives with β-cyclodextrin (β-CD) is presented. The change in electrophoresis mobilities was used to assess the binding constants by non-linear regression and three different linear plots methods (named double reciprocal, x-reciprocal and y-reciprocal). The substituent group(s) attached to the naphthalene ring considerably affected the inclusion behaviors of these naphthalenesulfonate derivatives. The binding constant varies over almost one order of magnitude and a highly selective sequence is obtained between these guest model compounds. Naphthalenesulfonates with the substituent(s) at the 2-position(s) displayed stronger interaction with β-CD, and gave well compatible results by these four plot methods. While at least one substituent was substituted into the 1-position of naphthalene showed the weak interaction or no interaction with β-CD. Comparison to three linear regression methods, the non-linear regression method proves to be the most suitable for these determinations. Additionally, apparent binding constants for each structural isomer with β-CD at several temperature, and thermodynamic parameters for binding were also calculated and discussed.     

谷胱甘肽分子印迹聚合物的制备及其性能研究

采用新型光源高压汞灯制备了三肽分子谷胱甘肽的分子印迹聚合物(MIPs), 反应时间缩短, 制备条件温和. 对MIPs做了一系列的静态吸附实验, 结合荧光测定法研究了不同单体-模板比例下MIPs表现出来的吸附性能. 对最佳比例制备的MIPs进行了一系列性能研究, 包括吸附等温线的测定、Scatchard分析以及薄层色谱分离实验等. 结果表明, 所合成的MIPs对GSH具有良好的吸附和选择识别能力,最大吸附量为45.4 mg/g, 特异因子达到了4.98.     

谷胱甘肽分子印迹聚合物的制备及其性能研究

采用新型光源高压汞灯制备了三肽分子谷胱甘肽的分子印迹聚合物(MIPs),反应时间缩短,制备条件温和.对MIPs做了一系列的静态吸附实验,结合荧光测定法研究了不同单体-模板比例下MIPs表现出来的吸附性能.对最佳比例制备的MIPs进行了一系列性能研究,包括吸附等温线的测定、Scatchard分析以及薄层色谱分离实验等.结果表明,所合成的MIPs对GSH具有良好的吸附和选择识别能力,最大吸附量为45·4mg/g,特异因子达到了4·98.     

Thermodynamic Studies of Myelin Basic Protein upon Interaction with Zinc

The interaction of myelin basic protein (MBP) from bovine central nervous system with divalent zinc ion was studied by UV‐Vis titration spectrophotometry and isothermal titration calorimetry techniques at 27°C in Tris buffer solution at pH = 7.2. MBP has one binding site for a zinc ion. The binding of a zinc ion is endothermic (ΔH = + 159 kJ mol^?1) with a dissociation binding constant of 0.445 μM. The results obtained by two previous methods of isothermal titration spectrophotometry and calorimetry are similar and consistent with the result obtained from a new calculation method of calorimetric data analysis according to the Scatchard plot.     

A note on the analysis of ligand binding by the 'double-logarithmic' plot

The double-logarithmic plot has been employed for the fluorometric analysis of ligand binding. This analysis is valid only for 1:1 binding of a non-aggregating ligand and if the plot is based on the free, and not the total, ligand concentration.     

Induction of a remarkable conformational change in a human telomeric sequence by the binding of naphthyridine dimer: inhibition of the elongation of a telomeric repeat by telomerase

The binding of a dimeric form of the 2-amino-1,8-naphthyridine derivative (naphthyridine dimer) to a human telomeric sequence, TTAGGG, was investigated by UV melting, CD spectra, and CSI-MS measurements. Both the 9-mer d(TTAGGGTTA) and the 15-mer d(TTAGGGTTAGGGTTA) showed apparent melting temperatures (T(m)) of 45.6 and 63.6 degrees C, respectively, in the presence of naphthyridine dimer (30 microM) in sodium cacodylate buffer (50 mM, pH 7.0) containing 100 mM NaCl. The CD spectra at 235 and 255 nm of the 9-mer increased in intensity accompanied with strong induced CDs at 285 and 340 nm upon complex formation with naphthyridine dimer. UV titration of the binding of naphthyridine dimer to the 9-mer at 320 nm showed a hypochromism of the spectra. A Scatchard plot of the data showed the presence of multiple binding sites with different association constants. Cold spray ionization mass spectrometry of the complex between naphthyridine dimer and the 9-mer clearly showed that one to three molecules of the ligand bound to the dimer duplex of the 9-mer. Telomeric repeat elongation assay showed that the binding of naphthyridine dimer to the telomeric sequence inhibits the elongation of the sequence by telomerase.     

A novel lophine-based fluorescence probe and its binding to human serum albumin

The binding of a lophine-based fluorescence probe, 4-[4-(4-dimethylaminophenyl)-5-phenyl-1H-imidazol-2-yl]benzoic acid methyl ester (DAPIM) with human serum albumin (HSA) was investigated by fluorescence spectroscopy under physiological conditions. While DAPIM shows extreme low fluorescence in aqueous solution, DAPIM binding with HSA emits strong fluorescence at 510 nm. The binding constant and binding number determined by Scatchard plot was 3.65 × 10⁶ M⁻¹ and 1.07, respectively. Competitive binding between DAPIM and other ligands such as warfarin, valproic acid, diazepam and oleic acid, were also studied fluorometrically. The results indicated that the primary binding site of DAPIM to HSA is site II at subdomain IIIA. DAPIM can be a useful fluorescence probe for the characterization of drug-binding sites. In addition to the interaction study, because the fluorescence intensity of DAPIM increased in proportion to HSA concentration, its potential in HSA assay for serum sample was also evaluated.     

Calix[4]arene-based crab-like molecular sensors for highly selective detection of mercury and copper ions

In this work, two novel chemosensors based on calix[4]arene bearing (thio)barbituric acid groups (BC1 and BC2) were synthesised, and their structures were characterised by HRMS, NMR and FTIR. Furthermore, their binding properties towards various biologically relevant metal ions were studied by fluorescence titrations, ¹H NMR spectroscopies and Job’s plot evaluations. The chemosensor BC1 displayed excellent binding affinity and selectivity towards Cu²⁺, which was characterised using fluorescence spectroscopy. On the other hand, BC2 exhibited a very remarkable fluorescence enhancement as well as visible colour change from pale green to sunset yellow, in presence of Hg²⁺ ions. Finally, Job’s plot method revealed 1:1 binding stoichiometry for both BC1:Cu²⁺ complex and BC2:Hg²⁺ complex.     

Interaction of chlorin p6 with bovine serum albumin and photodynamic oxidation of protein

The binding of chlorin p6, a photosensitizer having basic tetrapyrrole structure, to bovine serum albumin (BSA) and oxidation of the protein following photodynamic treatment is studied. The Stern-Volmer plot indicates that binding of chlorin p6 to BSA was of single class. Binding parameters, binding association constant and number of binding sites, were found to be 1.62+/-0.27 x 10(5)M(-1) and 1.086+/-.019, respectively. Photodynamic oxidation of protein was studied by (i) loss of intrinsic fluorescence of protein, (ii) protein carbonyl formation, (iii) protein hydroperoxide (iv) formation of TCA soluble amino groups and (v) SDS-polyacrylamide gel electrophoresis (SDS-PAGE). Intrinsic protein fluorescence was observed to decrease almost linearly as a function of irradiation time at a fixed concentration of chlorin p6 and with increasing concentration of chlorin p6 at fixed time of irradiation. Protein carbonyl and hydroperoxide formation was found to increase with increasing photodynamic treatment. No significant increase in 5% TCA soluble amino groups was observed. SDS-polyacrylamide gel electrophoresis (SDS-PAGE) reveals that photodynamic treatment of BSA in presence of chlorin p6, rose bengal and riboflavin causes non-specific fragmentation of protein. Photodynamic carbonyl formation by chlorin p6 was not inhibited by sodium formate (100 mM) or mannitol (25 mM) but was significantly inhibited by sodium azide (2 mM). Protein carbonyl formation increased almost 90% when H2O was replaced by D2O. The results show that chlorin p6 induced photodynamic oxidation of BSA was mainly mediated by singlet oxygen.     

Adsorption of indole and 2-methylindole on ligand-exchange matrix

The adsorption of indole and its 2-methyl derivative from aqueous solutions onto cobalt(II)-carboxylated diaminoethane sporopollenin (CDAE-sporopollenin) was studied using a fixed-bed column at 25+/-0.1 degrees C. Minicolumn adsorption studies showed that the breakthrough and the total adsorption capacities of CDAE-sporopollenin in the concentration range we have studied increased with increasing external ligand concentration. The characteristics of the adsorption process were investigated using Scatchard plot analysis, where the equilibrium binding data for indole on ligand exchanger gave rise to a linear plot. However, for 2-methylindole, divergence from the Scatchard plot was evident, consistent with the participation of secondary equilibrium effects in the adsorption process. The adsorption behaviors of ligands on CDAE-sporopollenin were expressed by both the Langmuir and Freundlich isotherms. The adsorption isotherm data for these ligands on the resin can be satisfactorily fitted to the Freundlich isotherm within the concentration range studied. However, in the case of 2-methylindole, the experimental data did not fit the Langmuir model, especially when a high ligand concentration range is used; this is probably due to the nonspecific interactions between the ligand exchange matrix and the methyl group present. Ligand adsorption constants and correlation coefficients for the ligands were calculated from the Langmuir and Freundlich isotherms.     

Adsorptivity of polyvinylpolypyrrolidone for selective separation of U(VI) from nitric acid media

Adsorptivity of polyvinylpolypyrrolidone (PVPP), a candidate resin with selectivity to U(VI) in HNO₃ media, to various metal ions was examined. It was found that PVPP has a strong adsorptivity to U(VI) in wide concentration range of HNO₃. The Scatchard plot analysis revealed that the adsorption of U(VI) by PVPP occurs at plural binding sites. The infrared spectroscopic analysis suggested that the strong binding site is due to the coordination of the carbonyl oxygen atom and the nitrogen atom in the pyrrolidone ring to UO₂ ²⁺. It was also found that fission product ions except Re(VII) as the simulant of Tc(VII) and Pd(II) are not adsorbed onto PVPP. The adsorptivities to Tc(VII) and Pd(II) species are weak, indicating that U(VI) can be separated from other metal ions by PVPP.     

Study binding of Al-curcumin complex to ds-DNA, monitoring by multispectroscopic and voltammetric techniques

In this work a complex of Al3+ with curcumin ([Al(curcumin) (EtOH)2](NO3)2) was synthesized and characterized by UV-vis, FT-IR, elemental analysis and spectrophotometric titration techniques. The mole ratio plot revealed a 1:1 complex between Al3+ and curcumin in solution. For binding studies of this complex to calf thymus-DNA various methods such as: UV-vis, fluorescence, circular dichroism (CD), FT-IR spectroscopy and cyclic voltammetry were used. The intrinsic binding constant of ACC with DNA at 25°C was calculated by UV-vis and cyclic voltammetry as 2.1×10(4) and 2.6×10(4), respectively. The thermodynamic studies showed that the reaction is enthalpy and entropy favored. The CD results showed that only the Δ-ACC interacts with DNA and the Δ-ACC form has not any tendency to interact with DNA, also the pure curcumin has not any stereoselective interaction with CT-DNA. Fluorimetric studies showed that fluorescence enhancement was initiated by a static process in the ground state. The cyclic voltammetry showed that ACC interact with DNA with a binding site size of 2. From the FT-IR we concluded that the Δ-ACC interacts with DNA via partial electrostatic and minor groove binding. In comparison with previous works it was concluded that curcumin significantly reduced the affinity of Al3+ to the DNA.     

Spectral modulation of a charge transfer reaction of 2-methoxy-4-(N,N-dimethylamino)benzaldehyde inside cyclodextrin nanocage

This article reports modulation of intramolecular charge transfer (ICT) reaction of 2-methoxy-4-(N,N-dimethylamino)benzaldehyde (2-MDMABA) encapsulated within the cyclodextrin nanocavities investigated by steady state and time resolved measurements. The ICT emission, absent in bulk water, originates in the presence of α-, β- and γ-CD with the huge enhancement of local emission. From the Benesi–Hildebrand plot, the stoichiometry of the host–guest inclusion complex is found to be 1:1 for β- and γ-CD whereas 1:1 and 1:2 guest to host complexation occur at low and high concentration of α-CD, respectively. The association constants of the inclusion complexes have also been estimated from the Benesi–Hildebrand plot. The greater binding capability of 2-MDMABA with β-CD than that of other two CDs is further supplemented by time resolved study.