Neutral 4‐phenyl‐1‐[phenyl(pyridin‐2‐yl)methylidene]semicarbazide and its salt forms with inorganic anions

Semicarbazones can exist in two tautomeric forms. In the solid state, they are found in the keto form. This work presents the synthesis, structures and spectroscopic characterization (IR and NMR spectroscopy) of four such compounds, namely the neutral molecule 4‐phenyl‐1‐[phenyl(pyridin‐2‐yl)methylidene]semicarbazide, C₁₉H₁₆N₄O, (I), abbreviated as HBzPyS, and three different hydrated salts, namely the chloride dihydrate, C₁₉H₁₇N₄O⁺·Cl^?·2H₂O, (II), the nitrate dihydrate, C₁₉H₁₇N₄O⁺·NO₃^?·2H₂O, (III), and the thiocyanate 2.5‐hydrate, C₁₉H₁₇N₄O⁺·SCN^?·2.5H₂O, (IV), of 2‐[phenyl({[(phenylcarbamoyl)amino]imino})methyl]pyridinium, abbreviated as [H₂BzPyS]⁺·X^?·nH₂O, with X = Cl^? and n = 2 for (II), X = NO₃^? and n = 2 for (III), and X = SCN^? and n = 2.5 for (IV), showing the influence of the anionic form in the intermolecular interactions. Water molecules and counter‐ions (chloride or nitrate) are involved in the formation of a two‐dimensional arrangement by the establishment of hydrogen bonds with the N—H groups of the cation, stabilizing the E isomers in the solid state. The neutral HBzPyS molecule crystallized as the E isomer due to the existence of weak π–π interactions between pairs of molecules. The calculated IR spectrum of the hydrated [H₂BzPyS]⁺ cation is in good agreement with the experimental results.     

Isomorphous crystals of strychninium 4‐chloro­benzoate and strychninium 4‐nitro­benzoate

In strychninium 4‐chloro­benzoate, C₂₁H₂₃N₂O₂⁺·C₇H₄ClO₂⁻, (I), and strychninium 4‐nitro­benzoate, C₂₁H₂₃N₂O₂⁺·C₇H₄NO₄⁻, (II), the strychninium cations form pillars stabilized by C—H⋯O and C—H⋯π hydrogen bonds. Channels between the pillars are occupied by anions linked to one another by C—H⋯π hydrogen bonds. The cations and anions are linked by ionic N—H⁺⋯O⁻ and C—H⋯X hydrogen bonds, where X = O, π and Cl in (I), and O and π in (II).     

Hydrogen‐bonded 1,2‐bis(4‐pyridyl)ethylene and maleic acid

The title compound (systematic name: 4,4′‐ethyl­ene­dipyridinium dimaleate), C₁₂H₁₂N₂²⁺·2C₄H₃O₄^?, is a 1:2 adduct of 1,2‐bis(4‐pyridyl)­ethyl­ene (BPE) and maleic acid (MA). The interaction between the two components in the molecular complex is due to intermolecular hydrogen bonding via an N⁺—H?O^? hydrogen bond.     

Piperazine‐1,4‐diium–2,4‐dinitrophenolate–water (1/2/2)

In the title 1/2/2 adduct, C₄H₁₂N₂²⁺·2C₆H₃N₂O₅^?·2H₂O, the dication lies on a crystallographic inversion centre and the asymmetric unit also has one anion and one water mol­ecule in general positions. The 2,4‐di­nitro­phenolate anions and the water mol­ecules are linked by two O—H?O and two C—H?O hydrogen bonds to form molecular ribbons, which extend along the b direction. The piperazine dication acts as a donor for bifurcated N—H?O hydrogen bonds with the phenolate O atom and with the O atom of the o‐nitro group. Six symmetry‐related molecular ribbons are linked to a piperazine dication by N—H?O and C—H?O hydrogen bonds.     

Three‐dimensional networks in 5‐methylimidazolium 3‐carboxy‐4‐hydroxybenzenesulfonate and bis(5‐methylimidazolium) 3‐carboxylato‐4‐hydroxybenzenesulfonate

The two title proton‐transfer compounds, 5‐methylimidazolium 3‐carboxy‐4‐hydroxybenzenesulfonate, C₄H₇N₂⁺·C₇H₅O₆S⁻, (I), and bis(5‐methylimidazolium) 3‐carboxylato‐4‐hydroxybenzenesulfonate, 2C₄H₇N₂⁺·C₇H₅O₆S²⁻, (II), are each organized into a three‐dimensional network by a combination of X—H...O (X = O, N or C) hydrogen bonds, and π–π and C—H...π interactions.     

Threefold interweaving of (4,4) nets built from R(58) rings in the hydrogen‐bonded adduct 1,4‐diaza­bicyclo[2.2.2]octane–5‐hydroxy­isophthalic acid (1/1)

The 1:1 adduct of 1,4‐di­aza­bi­cyclo­[2.2.2]­octane and 5‐hydroxy­isophthalic acid is a salt, [H(C₆H₁₂N₂)]⁺·­[HOC₆H₃(COOH)COO]^? or C₆H₁₃N₂⁺·C₈H₅O₅^?. The ions are linked by three types of hydrogen bond, i.e. N—H?O, O—H?O and O—H?N, into continuous two‐dimensional (4,4) nets built from a single type of R(58) ring. Six independent sheets of this type make up the structure and these are interwoven in sets of three.     

Two salts of 5‐sulfosalicylic acid and 3‐aminopyridine

5‐Sulfosalicylic acid (5‐SSA) and 3‐aminopyridine (3‐APy) crystallize in the same solvent system, resulting in two kinds of 1:1 proton‐transfer organic adduct, namely 3‐aminopyridinium 3‐carboxy‐4‐hydroxybenzenesulfonate monohydrate, C₅H₇N₂⁺·C₇H₅O₆S⁻·H₂O or 3‐APy·5‐SSA·H₂O, (I), and the anhydrous adduct, C₅H₇N₂⁺·C₇H₅O₆S⁻ or 3‐APy·5‐SSA, (II). Both compounds have extensively hydrogen‐bonded three‐dimensional layered polymer structures, with interlayer homo‐ and heterogeneous π–π interactions in (I) and (II), respectively.     

1:2 Complexes of chloranilic acid with pyrazole and imidazole,and the aceto­nitrile solvate of a 1:1 complex with imidazole

2,5‐Di­chloro‐3,6‐di­hydroxy‐1,4‐benzo­quinone (chloranilic acid) forms X—H?Y (X, Y = N or O) and C—H?Cl hydrogen bonds with pyrazole and imidazole to afford bis­(pyrazolium) di­chloro­anilate and bis­(imidazolium) di­chloro­anilate, (I) and (II), both 2C₃H₅N₂⁺·C₆Cl₂O₄^2?, and imidazolium chloro­anilate aceto­nitrile solvate, C₃H₅N₂⁺·­C₆HCl₂O₄^?·C₂H₃N, (III). Their crystal structures demonstrate three novel supramolecular architectures based on supramolecular synthons to build a ladder, (I), a two‐dimensional network, (II), and a flat ribbon, (III).     

Zero‐, one‐ and two‐dimensional hydrogen‐bonded structures in the 1:1 proton‐transfer compounds of 4,5‐dichlorophthalic acid with the monocyclic heteroaromatic Lewis bases 2‐aminopyrimidine,nicotinamide and isonicotinamide

The structures of the anhydrous 1:1 proton‐transfer compounds of 4,5‐dichlorophthalic acid (DCPA) with the monocyclic heteroaromatic Lewis bases 2‐aminopyrimidine, 3‐(aminocarbonyl)pyridine (nicotinamide) and 4‐(aminocarbonyl)pyridine (isonicotinamide), namely 2‐aminopyrimidinium 2‐carboxy‐4,5‐dichlorobenzoate, C₄H₆N₃⁺·C₈H₃Cl₂O₄⁻, (I), 3‐(aminocarbonyl)pyridinium 2‐carboxy‐4,5‐dichlorobenzoate, C₆H₇N₂O⁺·C₈H₃Cl₂O₄⁻, (II), and the unusual salt adduct 4‐(aminocarbonyl)pyridinium 2‐carboxy‐4,5‐dichlorobenzoate–methyl 2‐carboxy‐4,5‐dichlorobenzoate (1/1), C₆H₇N₂O⁺·C₈H₃Cl₂O₄⁻·C₉H₆Cl₂O₄, (III), have been determined at 130 K. Compound (I) forms discrete centrosymmetric hydrogen‐bonded cyclic bis(cation–anion) units having both R₂²(8) and R₁²(4) N—H...O interactions. In (II), the primary N—H...O‐linked cation–anion units are extended into a two‐dimensional sheet structure via amide–carboxyl and amide–carbonyl N—H...O interactions. The structure of (III) reveals the presence of an unusual and unexpected self‐synthesized methyl monoester of the acid as an adduct molecule, giving one‐dimensional hydrogen‐bonded chains. In all three structures, the hydrogen phthalate anions are essentially planar with short intramolecular carboxyl–carboxylate O—H...O hydrogen bonds [O...O = 2.393 (8)–2.410 (2) Å]. This work provides examples of low‐dimensional 1:1 hydrogen‐bonded DCPA structure types, and includes the first example of a discrete cyclic `heterotetramer.' This low dimensionality in the structures of the 1:1 aromatic Lewis base salts of the parent acid is generally associated with the planar DCPA anion species.     

[6‐Amino‐3‐methyl‐5‐nitro­so­pyrimidine‐2,4(1H,3H)‐dionato]­sodium dihydrate at 150 K: coordination‐polymer ladders linked by hydrogen bonds

In the title compound, [Na(C₅H₅N₄O₃)]·2H₂O, each Na cation is linked to three C₅H₄N₄O₃^? anions and two water mol­ecules, forming approximately octahedral NaNO₅ units; the cations and the anions form molecular ladders, and each ladder is linked to four neighbouring ladders by O—H?O and O—H?N hydrogen bonds.     

A solid‐state oxidation of 1,1,3,3‐tetramethylguanidinium 4‐methylbenzenesulfinate to 1,1,3,3‐tetramethylguanidinium 4‐methylbenzenesulfonate

The organic acid–base complex 1,1,3,3‐tetramethylguanidinium 4‐methylbenzenesulfonate, C₅H₁₄N₃⁺·C₇H₇O₃S⁻, was obtained from the corresponding 1,1,3,3‐tetramethylguanidinium 4‐methylbenzenesulfinate complex, C₅H₁₄N₃⁺·C₇H₇O₂S⁻, by solid‐state oxidation in air. Comparison of the two crystal structures reveals similar packing arrangements in the monoclinic space group P2₁/c, with centrosymmetric 2:2 tetramers being connected by four strong N—H...O=S hydrogen bonds between the imine N atoms of two 1,1,3,3‐tetramethylguanidinium bases and the O atoms of two acid molecules.     

Impact of the anion and chalcogen on the crystal structure and properties of 4,6‐dimethyl‐2‐pyrimido(thio)nium halides

By the reaction of urea or thiourea, acetylacetone and hydrogen halide (HF, HBr or HI), we have obtained seven new 4,6‐dimethyl‐2‐pyrimido(thio)nium salts, which were characterized by single‐crystal X‐ray diffraction, namely, 4,6‐dimethyl‐2‐oxo‐2,3‐dihydropyrimidin‐1‐ium bifluoride, C₆H₉N₂O⁺·HF₂^? or (dmpH)F₂H, 4,6‐dimethyl‐2‐oxo‐2,3‐dihydropyrimidin‐1‐ium bromide, C₆H₉N₂O⁺·Br^? or (dmpH)Br, 4,6‐dimethyl‐2‐oxo‐2,3‐dihydropyrimidin‐1‐ium iodide, C₆H₉N₂O⁺·I^? or (dmpH)I, 4,6‐dimethyl‐2‐oxo‐2,3‐dihydropyrimidin‐1‐ium iodide–urea (1/1), C₆H₉N₂O⁺·I^?·CH₄N₂O or (dmpH)I·ur, 4,6‐dimethyl‐2‐sulfanylidene‐2,3‐dihydropyrimidin‐1‐ium bifluoride–thiourea (1/1), C₆H₉N₂S⁺·HF₂^?·CH₄N₂S or (dmptH)F₂H·tu, 4,6‐dimethyl‐2‐sulfanylidene‐2,3‐dihydropyrimidin‐1‐ium bromide, C₆H₉N₂S⁺·Br^? or (dmptH)Br, and 4,6‐dimethyl‐2‐sulfanylidene‐2,3‐dihydropyrimidin‐1‐ium iodide, C₆H₉N₂S⁺·I^? or (dmptH)I. Three HCl derivatives were described previously in the literature, namely, 4,6‐dimethyl‐2‐oxo‐2,3‐dihydropyrimidin‐1‐ium chloride, (dmpH)Cl, 4,6‐dimethyl‐2‐sulfanylidene‐2,3‐dihydropyrimidin‐1‐ium chloride monohydrate, (dmptH)Cl·H₂O, and 4,6‐dimethyl‐2‐sulfanylidene‐2,3‐dihydropyrimidin‐1‐ium chloride–thiourea (1/1), (dmptH)Cl·tu. Structural analysis shows that in 9 out of 10 of these compounds, the ions form one‐dimensional chains or ribbons stabilized by hydrogen bonds. Only in one compound are parallel planes present. In all the structures, there are charge‐assisted N⁺—H…X^? hydrogen bonds, as well as weaker C_Ar⁺—H…X^? and π⁺…X^? interactions. The structures can be divided into five types according to their hydrogen‐bond patterns. All the compounds undergo thermal decomposition at relatively high temperatures (150–300 °C) without melting. Four oxopyrimidinium salts containing a π⁺…X^?…π⁺ sandwich‐like structural motif exhibit luminescent properties.     

Adducts of 1,1,1‐tris(4‐hydroxy­phenyl)­ethane with 1,2‐bis(4‐pyridyl)­ethane and 1,2‐bis(4‐pyridyl)­ethene: continuously interwoven structures in three dimensions

In the adduct 1,2‐bis(4‐pyridyl)­ethane–1,1,1‐tris(4‐hydroxy­phenyl)­ethane (1/2), C₁₂H₁₂N₂·2C₂₀H₁₈O₃, the bipyridyl component lies across an inversion centre in P. The tris‐phenol mol­ecules [systematic name: 4,4′,4′′‐(ethane‐1,1,1‐triyl)­triphenol] are linked by O—H?O hydrogen bonds to form sheets built from R(38) rings, and symmetry‐related pairs of sheets are linked by the bipyridyl mol­ecules via O—H?N hydrogen bonds to form open bilayers. Each bilayer is interwoven with two adjacent bilayers, forming a continuous three‐dimensional structure. In the adduct 1,2‐bis(4‐pyridyl)­ethene–1,1,1‐tris(4‐hydroxy­phenyl)­ethane–methanol (1/1/1), C₁₂H₁₀N₂·C₂₀H₁₈O₃·CH₄O, the mol­ecules are linked by O—H?O and O—H?N hydrogen bonds into three interwoven three‐dimensional frameworks, generated by single spiral chains along [010] and [001] and a triple‐helical spiral along [100].     

Stabilization of Substituted Triazenide Oxides: Synthesis and X‐ray Structural Features of Polymeric Potassium 3‐(4‐carboxylatophenyl)‐1‐methyltriazene N‐oxide‐hydrate, {K[O2C‐C6H4‐N(H)NN(CH3)O]·4H2O}n

3‐(4‐carboxyphenyl)‐1‐methyltriazene N‐oxide reacts with KOH in methanol/pyridine to give {K[O₂C‐C₆H₄‐N(H)NN(CH₃)O]·4H₂O}_n, Potassium‐3‐(4‐carboxylatophenyl)‐1‐methyltriazene N‐oxide). The terminal carboxylato group of the anion does not interact with the cation. In the crystal lattice of {K(C₈H₈N₃O₃)·4H₂O}_n each three of the four water molecules interact with two potassium cations, every K⁺ ion being the centre of six bridging K···O interactions. Potassium cations interact further with the terminal N‐oxigen atom of single [C₈H₈N₃O₃]^? anions achieving two parallel {C₈H₈N₃O₃^?K⁺}_n chains, which are linked through water molecules. The resulting polymeric, one‐dimensional chain, is operated by a screw axis 2₁ parallel to the crystallographic direction [010], along and equidistant to the K⁺ centres. The coordination of the K⁺ centres involves a distortion of the boat conformation of elementary sulfur (S₈) with the ideal C_2v symmetry.     

The proton‐transfer compounds of strychnine with achiral salicylic acids: strychninium 3,5‐dinitro­salicylate and the strychninium 5‐nitro­salicylate bis­(5‐nitro­salicylic acid) adduct

In the crystal structures of the proton‐transfer compounds of strychnine with 3,5‐dinitro­salicylic acid, namely strychninium 3,5‐dinitro­salicylate, C₂₁H₂₃N₂O₂⁺·C₇H₃N₂O₇⁻, (I), and 5‐nitro­salicylic acid, namely strychninium–5‐nitro­salicylate–5‐nitro­salicylic acid (1/1/2), C₂₁H₂₃N₂O₂⁺·C₇H₄NO₅⁻·2C₇H₅NO₅, (II), protonation of one of the N atoms of the strychnine mol­ecule occurs and this group is subsequently involved in inter­molecular hydrogen‐bonding inter­actions. In (I), this is four‐centred, the primary being with an adjacent strychninium carbonyl O‐atom acceptor in a side‐to‐side inter­action giving linear chains. Other inter­actions are with the phenolate and nitro O‐atom acceptors of the anionic species, resulting in a one‐dimensional polymer structure. In (II), the N⁺—H inter­action is three‐centred, the hydrogen bonding involving carboxyl O‐atom acceptors of the anion and both acid adduct species, giving unique discrete hetero‐tetramer units. The structure of (II) also features π‐bonding inter­actions between the two acid adduct mol­ecules.     

Supramolecular hydrogen‐bonded networks in cytosinium succinate and cytosinium 4‐nitrobenzoate cytosine monohydrate

In cytosinium succinate (systematic name: 4‐amino‐2‐oxo‐2,3‐dihydropyrimidin‐1‐ium 3‐carboxypropanoate), C₄H₆N₃O⁺·C₄H₅O₄⁻, (I), the cytosinium cation forms one‐dimensional self‐assembling patterns by intermolecular N—H...O hydrogen bonding, while in cytosinium 4‐nitrobenzoate cytosine monohydrate [systematic name: 4‐amino‐2‐oxo‐2,3‐dihydropyrimidin‐1‐ium 4‐nitrobenzoate 4‐aminopyrimidin‐2(1H)‐one solvate monohydrate], C₄H₆N₃O⁺·C₇H₄NO₄⁻·C₄H₅N₃O·H₂O, (II), the cytosinium–cytosine base pair, held together by triple hydrogen bonds, leads to one‐dimensional polymeric ribbons via double N—H...O hydrogen bonds. This study illustrates clearly the different alignment of cytosine molecules in the crystal packing and their ability to form supramolecular hydrogen‐bonded networks with the anions.     

Hydrogen‐bonded assemblies of 5,10,15,20‐tetrakis(4‐hydroxyphenyl)porphyrin with dimethylformamide,dimethylacetamide and water

The title free base porphyrin compound forms hydrogen‐bonded adducts with N,N‐dimethylformamide, C₄₄H₃₀N₄O₄·4C₃H₇NO, (I), a mixture of N,N‐dimethylformamide and water, C₄₄H₃₀N₄O₄·4C₃H₇NO·H₂O, (II), and a mixture of N,N‐dimethylacetamide and water, C₄₄H₃₀N₄O₄·6C₃H₇NO·2H₂O, (III). Total solvation of the four hydroxy functions of the porphyrin molecules characterizes all three compounds, thus preventing its supramolecular association into extended network architectures. In (I), the asymmetric unit consist of two five‐component adduct species, while in (III), the nine‐component entities reside on centres of inversion. This report provides the first structural characterizations of the free base tetra(hydroxyphenyl)porphyrin. It also demonstrates that the presence of strong Lewis bases, such as dimethylformamide or dimethylacetamide, in the crystallization mixture prevents direct supramolecular networking of the porphyrin ligands via O—H...O—H hydrogen bonds, due to their competing O—H...N(base) interaction with the hydroxy functions. The crystal packing of compounds (I)–(III) resembles that of other hydrogen‐bonding‐assisted tetraarylporphyrin clathrates.     

1‐Methyl­piperazine‐1,4‐diium 4‐nitro­phthalate(2–) 4‐nitro­phthalic acid monohydrate

The title adduct, C₅H₁₄N₂²⁺·C₈H₃NO₆²⁻·C₈H₅NO₆·H₂O, crystallizes in the monoclinic space group P2₁. All O atoms of the 4‐nitro­phthalate anions and neutral 4‐nitro­phthalic acid mol­ecules are involved in hydrogen bonding with the piperazine dication and the water mol­ecule of crystallization.     

The C—H⃛O hydrogen bond in (di­cyano­methyl)­ammonium p‐toluene­sulfonate

In the title compound, C₃H₄N₃⁺·C₇H₇O₃S^?, the activated C—H group of the cation forms a short but bent C—H?O hydrogen bond with a sulfonate O atom of the anion; C?O = 3.075 (5) Å and C—H?O = 130°.     

Comparison of the hydrogen‐bond patterns in 2‐amino‐1,3,4‐thiadiazolium hydrogen oxalate, 2‐amino‐1,3,4‐thiadiazole–succinic acid (1/2), 2‐amino‐1,3,4‐thiadiazole–glutaric acid (1/1) and 2‐amino‐1,3,4‐thiadiazole–adipic acid (1/1)

The X‐ray single‐crystal structure determinations of the chemically related compounds 2‐amino‐1,3,4‐thiadiazolium hydrogen oxalate, C₂H₄N₃S⁺·C₂HO₄⁻, (I), 2‐amino‐1,3,4‐thiadiazole–succinic acid (1/2), C₂H₃N₃S·2C₄H₆O₄, (II), 2‐amino‐1,3,4‐thiadiazole–glutaric acid (1/1), C₂H₃N₃S·C₅H₈O₄, (III), and 2‐amino‐1,3,4‐thiadiazole–adipic acid (1/1), C₂H₃N₃S·C₆H₁₀O₄, (IV), are reported and their hydrogen‐bonding patterns are compared. The hydrogen bonds are of the types N—H...O or O—H...N and are of moderate strength. In some cases, weak C—H...O interactions are also present. Compound (II) differs from the others not only in the molar ratio of base and acid (1:2), but also in its hydrogen‐bonding pattern, which is based on chain motifs. In (I), (III) and (IV), the most prominent feature is the presence of an R₂²(8) graph‐set motif formed by N—H...O and O—H...N hydrogen bonds, which are present in all structures except for (I), where only a pair of N—H...O hydrogen bonds is present, in agreement with the greater acidity of oxalic acid. There are nonbonding S...O interactions present in all four structures. The difference electron‐density maps show a lack of electron density about the S atom along the S...O vector. In all four structures, the carboxylic acid H atoms are present in a rare configuration with a C—C—O—H torsion angle of ∼0°. In the structures of (II)–(IV), the C—C—O—H torsion angle of the second carboxylic acid group has the more common value of ∼|180|°. The dicarboxylic acid molecules are situated on crystallographic inversion centres in (II). The Raman and IR spectra of the title compounds are presented and analysed.