Novel Fluorophores as Building Blocks for Optical Probes for In Vivo Near Infrared Fluorescence (NIRF) Imaging

Aiming at the identification of new fluorescent reporters for targeted optical probes, we assessed the application-relevant features of a novel asymmetric cyanine, DY-681, in comparison to the only clinically approved dye indocyanine green (ICG), the golden imaging standard Cy5.5, and the asymmetric cyanine DY-676 successfully exploited by us for the design of different contrast agents. This comparison included the analysis of the spectroscopic properties of the free fluorophores and their thermal stability in aqueous solution as well as their cytotoxic potential. In addition, the absorption and emission features of IgG-conjugated DY-681 were examined. The trimethine DY-681 exhibited spectral features closely resembling that of the pentamethine Cy5.5. Its high thermal stability in phosphate buffer saline (PBS) solution in conjunction with its low cytotoxicity, reaching similar values as determined for Cy5.5 and DY-676, renders this dye more attractive as ICG and, due to its improved fluorescence quantum yield in PBS, also superior to DY-676. Although in PBS, Cy5.5 was still more fluorescent, the fluorescence quantum yields (Φ _f) of DY-681 and Cy5.5 in PBS containing 5 mass-% bovine serum albumin (BSA) were comparable. Labeling experiments with DY-681 and the model antibody IgG revealed promisingly high Φ _f values of the bioconjugated dye.     

Enhancing the Emission of Polydiacetylene Sensing Materials Through Fluorophore Addition and Energy Transfer

Enhancement of the environmentally responsive fluorescent properties of polydiacetylene (PDA) by combination with lipophilic fluorophores was demonstrated and properties of the PDA/fluorophore systems were explored. Liposomes containing PDA and fluorophores exhibited enhanced Stokes shift and increase in emission as a result of energy transfer from PDA to fluorophore. The effects of fluorophore variation, degree of PDA polymerization and diyne placement in the diacetylene lipid tails on the emission enhancement were studied. It was determined that signal generation was optimized at a relatively low extent of PDA polymerization with the optimal degree of polymerization dependent on the other parameters. Energy transfer was used as a tool to detect fluorophore exchange between polymerized and unpolymerized liposomes and to study the effects of fluorophore structure on exchange from unpolymerized to PDA liposomes. Fluorophores that locate at the aqueous interface with alkyl anchors were slow to transfer while fluorophores that partition into the alkyl regions of the liposomes transfer quickly.     

One-pot synthesis of carbon dots co-doped with N and S: high quantum yield governed by molecular state and fluorescence detection of Ag+

Fluorescent carbon-based nanoparticles, called chronically as carbon dots (CDs), were synthesised from citric acid (CA) and 2-Aminothiophenol (2AT) via an N and S co-doped hydrothermal method. After a series of micro-structural characterisation, N and S elements could be sufficiently doped by means of the heteroatom in the CDs solution. The as-prepared CDs solution showed blue colour fluorescence with the highest QY of 78.6%, and study on the UV–visible and PL spectra further revealed that the outstanding fluorescence of as-prepared CDs mainly originates from the generated molecular fluorophores instead of the surface state. Owing to the strong fluorescence, the as-prepared CDs can be used as a sensing probe for the detection of Ag⁺ with high sensitivity and selectivity. However, the changes of fluorescence intensity exhibited the complex nature of the quenching mechanism due to the –SH and –NH₂ groups on the fringes of carbonaceous cores or molecular fluorophores to aggregate into another fluorescent cores with the assistance of Ag⁺ ions, which promises a new approach for efficient detection of Ag⁺ for the application in industrial pollutants.

This figure shows citric acid (CA) and 2-Aminothiophenol (2AT) via an N and S co-doped hydrothermal method to prepare CDs with blue colour fluorescence and the highest QY of 78.6%. Owing to the excellent fluorescence, the as-prepared CDs can be used as a sensing probe for the detection of Ag⁺ with high sensitivity and selectivity, and the changes of fluorescence intensity exhibited the complex nature of the quenching mechanism due to the –SH and –NH₂ groups on the fringes of carbonaceous cores or molecular fluorophores to aggregate into another fluorescent cores with the assistance of Ag⁺ ions, which promises a new approach for efficient detection of Ag⁺ for the application in industrial pollutants.     

Ethenyl indoles as neutral hydrophobic fluorescence probes

3‐(4‐Nitrophenylethenyl‐E)‐NH‐indole ( 1 ), 3‐(4‐nitrophenyl ethenyl‐E)‐N‐acetylindole ( 2 ), and 3‐(4‐nitrophenylethenyl‐E)‐N‐benzenesulfonylindole ( 3 ) are relatively less fluorescent in organic solvents, with fluorescence quantum yield (Φ_f) in the range of 0.002 to 0.066 depending on the solvent polarity. However, in bovine serum albumin (BSA)‐phosphate buffer, the fluorescence of these compounds gets drastically enhanced with Φ_f in the range of 0.21 to 0.67, depending on the substituent on the indolic nitrogen atom. Additionally, linear increase in the fluorescence intensity of 2 and 3 occurs on increasing the BSA concentration. These fluorescence properties together with the neutral, hydrophobic nature of these compounds make these fluorophores good fluorescence probe for studying the micropolarity of proteins like BSA and in general the ligand–protein interactions. Copyright © 2007 John Wiley & Sons, Ltd.     

Fluorescence Characteristics of Bisphenol A in Room Temperature Ionic Liquids

Room temperature ionic liquids (RTILs) are emerging as a new class of ‘green’ solvents for use in a wide range of chemical processes. RTILs can sensitize or quench fluorescence of organic chemicals and their interactions still remain unclear, especially for weakly fluorescent chemicals. Herein, we report the effects of six RTILs on the fluorescence behavior of bisphenol A (BPA). The fluorescence intensities (FIs) of BPA in a RTIL-acetonitrile system were significantly quenched compared to acetonitrile. The quenching effect was stronger for [C_nMIM]BF₄ than [C_nMIM]PF₆. A decreasing trend of fluorescence lifetime (FL) of BPA was observed for [C₆MIM]PF₆ (4.26 to 3.86 ns) and [C₁₄MIM]PF₆ (4.15 to 3.78 ns) with increasing RTIL concentrations in the range of 1–10 mM. The quenching mode was consistent with a static quenching mechanism based on the consistency of FL and FI results. The emission bands of BPA and RTILs did not interfere with each other when RTILs were used as the solvent. The investigated RTILs enhanced the FIs of strongly fluorescing chemicals (12.0?~?19.0-fold for norfloxacin and 6.1?~?8.5-fold for dansyl chloride), but quenched those of weakly fluorescing chemicals (BPA). These results demonstrate that RTILs have different fluorescent effects on organic chemicals with different fluorophores. The interactions between RTILs and BPA result from many factors in addition to viscosity, such as solvent electrostatic dielectric constant, refractive index, density, polarization and molecular interaction. These results provide a theoretical foundation for application of RTILs in the analysis of weakly fluorescing chemical.     

Membrane Organization and Dynamics of the G-Protein-Coupled Serotonin<Subscript>1A</Subscript> Receptor Monitored Using Fluorescence-Based Approaches

The G-protein-coupled receptor (GPCR) superfamily represents one of the largest classes of molecules involved in signal transduction across the plasma membrane. Fluorescence-based approaches have provided valuable insights into GPCR functions such as receptor–receptor and receptor–ligand interactions, real-time assessment of signal transduction, receptor dynamics on the plasma membrane, and intracellular trafficking of receptors. This has largely been possible with the use of fluorescent probes such as the green fluorescent protein (GFP) from the jellyfish Aequoria victoria and its variants. We discuss the potential of fluorescence-based approaches in providing novel information on the membrane organization and dynamics of the G-protein-coupled serotonin_1A receptor tagged to the enhanced yellow fluorescent protein (EYFP). These authors contributed equally to the work.     

Graphene-based hollow TiO2 composites with enhanced photocatalytic activity for removal of pollutants

Catalytically active graphene-based hollow TiO₂ composites(TiO₂/RGO) were successfully synthesized via the solvothermal method. Hollow TiO₂ microspheres are uniformly dispersed on RGO. X-ray diffraction (XRD), transmission electron microscopy (TEM), X-ray photoelectron spectroscopy (XPS), UV–vis diffuse reflectance spectroscopy (DRS) and photoluminescence (PL) were used for the characterization of prepared photocatalysts. The mass of GO was optimized in the photocatalytic removal of rhodamine B (RhB) as a model dye pollutants. The results showed that graphene-based hollow TiO₂ composites exhibit a significantly enhanced photocatalytic activity in degradation of RhB under either UV or visible light irradiation. The formation of the graphene-based hollow TiO₂ composites and the photocatalytic mechanisms under UV and visible light were also discussed.     

Development of a Fluorescent Enzyme-Linked DNA Aptamer-Magnetic Bead Sandwich Assay and Portable Fluorometer for Sensitive and Rapid Leishmania Detection in Sandflies

A fluorescent peroxidase-linked DNA aptamer-magnetic bead sandwich assay is described which detects as little as 100 ng of soluble protein extracted from Leishmania major promastigotes with a high molarity chaotropic salt. Lessons learned during development of the assay are described and elucidate the pros and cons of using fluorescent dyes or nanoparticles and quantum dots versus a more consistent peroxidase-linked Amplex Ultra Red (AUR; similar to resazurin) fluorescence version of the assay. While all versions of the assays were highly sensitive, the AUR-based version exhibited lower variability between tests. We hypothesize that the AUR version of this assay is more consistent, especially at low analyte levels, because the fluorescent product of AUR is liberated into bulk solution and readily detectable while fluorophores attached to the reporter aptamer might occasionally be hidden behind magnetic beads near the detection limit. Conversely, fluorophores could be quenched by nearby beads or other proximal fluorophores on the high end of analyte concentration, if packed into a small area after magnetic collection when an enzyme-linked system is not used. A highly portable and rechargeable battery-operated fluorometer with on board computer and color touchscreen is also described which can be used for rapid (<1 h) and sensitive detection of Leishmania promastigote protein extracts (～100 ng per sample) in buffer or sandfly homogenates for mapping of L. major parasite geographic distributions in wild sandfly populations.     

A ratiometric fluorescent aptamer homogeneous biosensor based on hairpin structure aptamer for AFB1 detection

On the basis of aptamer (Apt) with hairpin structure and fluorescence resonance energy transfer (FRET), a ratio fluorescent aptamer homogeneous sensor was prepared for the determination of Aflatoxin B₁ (AFB1). Initially, the Apt labeled simultaneously with Cy5, BHQ2, and cDNA labeled with Cy3 were formed a double-stranded DNA through complementary base pairing. The fluorescence signal of Cy3 and Cy5 were restored and quenched respectively. Thus, the ratio change of F_Cy3 to F_Cy5 was used to realized the detection of AFB1 with wider detection range and lower limit of detection (LOD). The response of the optimized protocol for AFB1 detection was wider linear range from 0.05 ng/mL to 100 ng/mL and the LOD was 12.6 pg/mL. The sensor designed in this strategy has the advantages of simple preparation and fast signal response. It has been used for the detection of AFB1 in labeled corn and wine, and has good potential for application in real samples.

     

A Simple and Sensitive Spectrofluorimetric Method for Analysis of Some Nitrofuran Drugs in Pharmaceutical Preparations

A simple, rapid, selective and sensitive spectrofluorimetric method was described for the analysis of three nitrofuran drugs, namely, nifuroxazide (NX), nitrofurantoin (NT) and nitrofurazone (NZ). The method involved the alkaline hydrolysis of the studied drugs by warming with 0.1 M sodium hydroxide solution then dilution with distilled water for NX or 2-propanol for NT and NZ. The formed fluorophores were measured at 465 nm (λ _Ex 265 nm), 458 nm (λ _Ex 245 nm) and 445 nm (λ _Ex 245 nm) for NX, NT and NZ, respectively. The reaction pathway was discussed and the structures of the fluorescent products were proposed. The different experimental parameters were studied and optimized. Regression analysis showed good correlation between fluorescence intensity and concentration over the ranges 0.08–1.00, 0.02–0.24 and 0.004–0.050 μg ml⁻¹ for NX, NT and NZ, respectively. The limits of detection of the method were 8.0, 1.9 and 0.3 ng ml⁻¹ for NX, NT and NZ, respectively. The proposed method was validated in terms of accuracy, precision and specificity, and it was successfully applied for the assay of the three nitrofurans in their different dosage forms. No interference was observed from common pharmaceutical adjuvants. The results were favorably compared with those obtained by reference spectrophotometric methods.     

Study the impact of ultra-sonication and pulsed electric field on the quality of wheat plantlet juice through FTIR and SERS

Pulsed electric field (PEF) and Ultrasound (US) are commonly used in food processing. We investigated the combined impact of pulsed electric field (PEF) and ultrasound (US) on the wheat plantlet juice. When compared with the individual treatments, the highest values of total phenolics, total flavonoids, chlorophyll, ORAC assay, and DPPH activities were obtained using the combined (US + PEF) methods. The US + PEF significantly decreased the peroxidase and polyphenol oxidase activities from 0.87 to 0.27 Abs min⁻¹ and 0.031–0.016 Abs min⁻¹. Also, the synergistic application significantly lowered the yeast and mold (3.92 to 2.11 log CFU/mL), E. coli/Coliform (1.95 to 0.96 log CFU/mL), and aerobics (4.41 to 2.01 log CFU/mL). Furthermore, Fourier Transform Infrared (FT-IR) and surface-enhanced Raman spectroscopy (SERS) was used to analyzing juice quality. Gold nanoparticles (AuNPs) were used as the SERS substrates, which provided stronger Raman peaks for the samples treated with US + PEF methods. The FT-IR analysis showed significant enhancement of the nutritional molecules. The enhanced quality of wheat plantlet juice combined with lower yeast and mold suggests the suitability of integrated methods for further research and applications.     

双光子荧光与相干反斯托克斯拉曼散射显微成像技术的实验研究

双光子荧光与相干反斯托克斯拉曼散射同属于三阶非线性效应,二者之间的差异与联系是一个值得研究的问题.本文基于自行搭建的超连续谱近红外宽带相干反斯托克斯拉曼散射显微成像系统进行光谱成像,同时通过理论与实验对比分析了双光子荧光与相干反斯托克斯拉曼散射图像存在差异的原因.结果表明,具有亚微米以上横向分辨率的相干反斯托克斯拉曼散射成像系统,可以使用较大尺寸的荧光珠进行双光子荧光成像,通过解卷积得到双光子荧光成像的系统分辨率,并将它近似等效于相干反斯托克斯拉曼散射成像系统的当下分辨率.如果需要得到相干反斯托克斯拉曼散射成像系准确的分辨率结果,就必须使用尺寸比相干反斯托克斯拉曼散射成像系统实际分辨率小的球形样品进行实验测量.     

Fluorescence Labelling of DNA by Carboxylic Polypyridyl-Ru Complexes Containing bpy and DIP Ligands: A Study Revisited

The coordination complexes (DIP)₂Ru(CH₃bpyCOOH) and (DIP)₂Ru(COOHbpyCOOH), where DIP and bpy are diphenylphenanthroline and bispyridine, have been recently proposed as fluorescent markers of nuclear DNA (Musatkina et al., J. Inorg. Biochem. 101:1086–1089, 2007), but no DNA binding investigation and no quantitative fluorescence evaluations had been done. Both complexes, as well as the smaller ones with bpy’s in place of DIP’s, have been investigated here by spectroscopic DNA titrations (UV–vis absorption, fluorescence, circular dichroism) and by in vitro cellular studies (flow cytometry and fluorescence imaging). Contrary to previous reports, neither the carboxylic function nor the more extended DIP ligand ensures any appreciable binding to DNA. This is clearly illustrated by the appearance of an isosbestic point of a second kind and by the proportionality of the fluorescence maximum intensity to the absorbance at the excitation wavelength. Above all, the lack of enhanced fluorescence in the presence of DNA definitively rules out the use of such complexes as DNA markers. Moreover, there is no detectable nuclear uptake. However, the fluorescent complexes with the DIP ligands, especially (DIP)₂Ru(CH₃bpyCOOH), are massively incorporated into the cytoplasm while preserving cell integrity, which could suggest other types of biological application.     

Optimization of long-period grating inscribed in large mode area photonic crystal fiber for design of bandstop filter

By inscribing long period grating (LPG) in a photonic crystal fiber (PCF), optical filters for communication wavelengths can be fabricated. In this paper, by utilizing coupled-mode theory and enhanced improved vectorial effective index method, a design of bandstop filter based on optimal LPG parameters is presented where the optimized full-width half-maximum (FWHM), the number (N) and total length of gratings of LPGs (L) are determined. As a result, by the determination of optimized LPG parameters with an optimum length of L_opt=6.5 mm and optimum number of grating N_opt=27 inscribed in the PCF, a bandstop optical filter with FWHM=1 nm is designed.     

Light induced fading associated with the application of OSL to personal dosimetry

Al₂O₃:C is the best material example that presents OSL response and adequate dosimetric behaviour for OSL dosimetry. It was the first commercial material manufactured for use in personal monitoring based on an OSL reader system from Landauer. The purpose of this paper was to report the results of optical fading experiments for the nanoDot commercial OSL detectors (Al₂O₃:C), provided by Landauer Inc. Five groups of different experimental conditions were formed with all detectors, exposing them to fluorescent and semiconductor light sources and to sun light. The loss of OSL signal when the detectors are kept open, was verified, which was already expected, but a loss in the OSL signal even when the detectors are exposed to light and covered with the manufacturer plastic protection are also revealed. The results show also that the use of Mylar filters can delay the OSL fading of the detectors.     

Theoretical design on a new double functional device of 2,2′‐bipyridine‐embedded N‐(9‐pyrenyl methyl)aza‐15‐crown‐5

Theoretical design on a new molecular switch and fluorescent chemosensor double functional device of aza‐crown ether (2,2′‐dipyridine‐embedded N‐(9‐anthraceneyl(pyrenyl)methyl)aza‐15‐crown‐5) was explored. The interactions between ligands and a series of alkaline earth metal cations (Mg²⁺, Ca²⁺, Sr²⁺, and Ba²⁺) were investigated. The fully optimized geometry structures of the free ligands ( L _1, L ₂) and their metal cation complexes ( L ₁/M²⁺, L ₂/M²⁺) were calculated with the B3LYP/6‐31G(d) method. The natural bond orbital analysis, which is based on optimized geometric structures, was used to explore the interaction of L ₁/M²⁺, L ₂/M²⁺ molecules. The absorption spectra of L _1, L ₂, L ₁/M²⁺, and L ₂/M²⁺, and their excited states were studied by time‐dependent density functional theory. A new type molecular device L ₂(2,2′‐dipyridine‐embedded N‐(9‐pyrenyl methyl)aza‐15‐crown‐5) is designed, which not only has the selectivity for Sr²⁺, and construct allosteric switch, but also has fluorescent sensor performance.     

Near-infrared diode laser absorption sensor for rapid measurements of temperature and water vapor in a shock tube

A fast-response (100 kHz) tunable diode laser absorption sensor is developed for measurements of temperature and H₂O concentration in shock tubes, e.g. for studies of combustion chemistry. Gas temperature is determined from the ratio of fixed-wavelength laser absorption of two H₂O transitions near 7185.60 cm^-1 and 7154.35 cm^-1, which are selected using design rules for the target temperature range of 1000–2000 K and pressure range of 1–2 atm. Wavelength modulation spectroscopy is employed with second-harmonic detection (WMS-2f) to improve the sensor sensitivity and accuracy. Normalization of the second-harmonic signal by the first-harmonic signal is used to remove the need for calibration and minimize interference from emission, scattering, beam steering, and window fouling. The laser modulation depth for each H₂O transition is optimized to maximize the WMS-2f signal for the target test conditions. The WMS-2f sensor is first validated in mixtures of H₂O and Ar in a heated cell for the temperature range of 500–1200 K (P=1 atm), yielding an accuracy of 1.9% for temperature and 1.4% for H₂O concentration measurements. Shock wave tests with non-reactive H₂O–Ar mixtures are then conducted to demonstrate the sensor accuracy (1.5% for temperature and 1.4% for H₂O concentration) and response time at higher temperatures (1200–1700 K, P=1.3–1.6 atm). PACS 42.62.Fi; 42.55.Px; 42.60.Fc; 07.35.+k     

Structural ordering and chemical stability of a complex perovskite oxide DyBa2ZrO5.5 with YBa2Cu3O7-δ superconductors

2 ZrO_5.5 has been synthesized by solid-state reaction. Structural ordering in this material has been studied by X-ray diffraction (XRD). The XRD spectra reveal that DyBa₂ZrO_5.5 has an ordered complex cubic perovskite structure. The presence of superstructure reflections in the XRD spectra is characteristic of A₂BB’O₆-type crystalline structure. The chemical stability of DyBa₂ZrO_5.5 with YBa₂CuO_7-δ (YBCO) superconductors has been studied by XRD and electrical resistivity measurements. These studies show that DyBa₂ZrO_5.5 is chemically stable with YBCO and there is no degradation in the superconducting transition temperature T_c of YBCO even when mixed up to 1:1 vol%, with DyBa₂ZrO_5.5 in YBCO. Detailed study of the superconducting transition region shows that T_c(onset) and T_c(0) values of pure YBCO and YBCO–DyBa₂ZrO_5.5 composites are similar in both cases. The implications are discussed. Accepted: 13 October 1997     

Salicylaldehyde Phenylhydrazone: A New Highly Selective Fluorescent Lead (II) Probe

The fluorescence intensity of salicylaldehyde phenylhydrazone (L), in 1:1 (v/v) CH₃OH:H₂O was enhanced by ca. 100 times with a blue shift in emission maximum, on interaction with Pb²⁺ ion. No enhancement in fluorescent intensity of L was observed on interaction with metal ions - Na⁺, K⁺, Ca²⁺, Cu²⁺, Ni²⁺, Zn²⁺, Cd²⁺ and Hg²⁺. This signal transduction was found to occur via photoinduced electron transfer (PET) mechanism. A 1:1 complexation between Pb²⁺ and L with log β?=?7.86 has been proved from fluorescent and UV/Visible spectroscopic data. The detection limit of Pb²⁺ was calculated to be 6.3?×?10^?7?M.     

Rapid synthesis and characterization of ultra‐thin shell Au@SiO2 nanorods with tunable SPR for shell‐isolated nanoparticle‐enhanced Raman spectroscopy (SHINERS)

The recently reported shell‐isolated nanoparticle‐enhanced Raman spectroscopy (SHINERS) is considered as the next generation of advanced spectroscopy for its surface and molecular generality. With the aim to utilize the virtues of shell‐isolated strategy and advance the SHINERS technique, we introduce a silane‐based rapid synthesis method of silica‐coating Au nanorods (Au@SiO₂ NRs) with manoeuvrable ultra‐thin shell and tunable SPR. The results demonstrate that the SPR of Au NRs could be optimized to obtain large Raman enhancement using either 633 nm or 785 nm laser. Differing from previously reported Au@SiO₂ NRs synthesis method, we can tune the silica shell thickness within several nanometers to maximize the Raman signal while effectively eliminating the exterior interference. And this advanced synthesis method has also significantly reduced the silica‐coating time from one day to ca. 1 h. This method as a new development of SHINERS technique has successfully got enhanced signal in solution Raman tests of malachite green, giving a great potential to be extended to in‐situ measurement for daily life detection. Copyright © 2013 John Wiley & Sons, Ltd.