蛋白质在疏水色谱中的变性热力学

研究21-80℃温度范围内一些蛋白质和小分子在疏水相互作用色谱中的热行为。利用Van't Hoff作图(lnk'-1/T)测定蛋白质分子的热力学参数(ΔH°, ΔS°和ΔG°), 根据标准熵变(ΔS°)和标准自由能变(ΔG°)判断蛋白质在色谱过程中的构象变化, 通过ΔH°-ΔS°的线性关系估计蛋白质变性时的"补偿温度"(β), 鉴定蛋白质在疏水相互作用色谱中保留机理的同一性。     

Conductometric and 1H NMR studies of thermodynamics of complexation of Zn2+, Cd2+ and Pb2+ ions with tetrathia-12-crown-4 in dimethylsulfoxide-nitrobenzene mixtures

The complex formation between Zn²⁺, Cd²⁺ and Pb²⁺ ions with macrocyclic ligand, tetrathia12-crown-4 (12S4) was studied in dimethylsulfoxide (DMSO)–nitrobenzene binary mixtures at different temperatures using conductometric and ¹H NMR methods. In all cases, 12S4 found to form 1:1 complexes with these cations. The formation constants of the resulting 1:1 complexes in different solvent mixtures were determined by computer fitting of the resulting molar conductance- and chemical shift-mole ratio data. There is an inverse relationship between the complex stability and the amount of DMSO in the solvent mixtures. The stability of the resulting M²⁺-12S4 complexes found to decrease in the order Pb²⁺ > Cd²⁺ > Zn²⁺. The values of ?H°, ?S° and ?G° for complexation reactions were evaluated from the temperature dependence of formation constants via van’t Hoff method. The obtained results revealed that, in all cases, the complexes are enthalpy stabilized, but entropy destabilized and the values of ?H° and ?S° are strongly depend on the nature of medium. There is also a linear relationship between all ΔH° and TΔS° values indicating the existence of entropy–enthalpy compensation in complexation of the three cations and ligand in the solvent systems studied.     

Hydrophobic effect for anionic dye - cationic surfactant interaction in aqueous and mixed solvent

Abstract

The interaction between anionic dyes [Reactive Orange 122 (R.O 122), Reactive Blue 19 (R.B 19), Reactive Violet 5 (R.V 5) and Acid Green 20 (A.G 20)] with cationic surfactant cetyltrimethylammoniun bromide (CTAB) has been investigated by spectrophotometry and conductance technique. The used dyes are characterized by tautomeric behavior which affects the mechanism of the interaction. Various parameters such as dye structure, surfactant composition, solvent composition, temperature and pH of the medium were studied. The spectral data were applied for calculating the binding constant between dye and surfactant (K_b), fraction of micellization (?_mic), and standard free energy change of binding (ΔG°_b) in 0,10,20 and 30 v/v % acetonitile (AN). Conductance technique was constructed to estimate the ion pairing constant (K_a) at different temperatures and v/v % AN. Thermodynamic parameters (ΔG°, ΔH° and ΔS°) for ion pair formation were evaluated. The role of hydrophobic and electrostatic effect on dye-surfactant interaction was discussed.     

The investigation of the interaction between NCP-EDA and bovine serum albumin by spectroscopic approaches

The fluorescence and ultraviolet spectroscopies were explored to study the interaction between N-confused porphyrins-edaravone diad (NCP-EDA) and bovine serum albumin (BSA) under simulative physiological condition at different temperatures. The experimental results show that the fluorescence quenching mechanism between NCP-EDA and BSA is a combined quenching (dynamic and static quenching). The binding constants, binding sites and the corresponding thermodynamic parameters (ΔG, ΔH, and ΔS) of the interaction system were calculated at different temperatures. According to F?rster non-radiation energy transfer theory, the binding distance between NCP-EDA and BSA was calculated to be 3.63 nm. In addition, the effect of NCP-EDA on the conformation of BSA was analyzed using synchronous fluorescence spectroscopy.     

Structure and thermodynamics of polystyrene-block-poly(ethylene/propene) micelles in selective solvents

The concentration and temperature dependencies of micelle formation by a polystyrene-block-poly(ethylene/propene) copolymer in several ketones (2-butanone, 3-pentanone, 4-methyl-2-pentanone, 4-heptanone, 5-methyl-2-hexanone and 5-methyl-3-heptanone) were studied by static and dynamic light scattering, viscometry and size exclusion chromatography. No micelles were detected in solutions of 5-methyl-3-heptanone. The standard Gibbs energy, ΔG°, the standard enthalpy, ΔH°, and the standard entropy, ΔS°, of micellization were estimated. The values of ΔG° and ΔH° were negative for all ketones studied and depended on the polar character of the ketone. The micelles showed larger association numbers and densities independent of the ketone. Micelle dimensions hardly depended on the ketone.     

Study on preparation and inclusion behavior of inclusion complexes between β-cyclodextrin derivatives with benzophenone

In the paper, the two chemically modified β-cyclodextrin derivatives of 4,4´-diaminodiphenyl ether-bridged-bis-β-cyclodextrins (ODA-bis-β-CD) and p-aminobenzenesulfonic acid-β-cyclodextrin (ABS-β-CD) were synthesized, and then these two β-cyclodextrin derivatives were respectively formed into inclusion complexes with benzophenone (BP) by co-precipitation method. The structure of the inclusion complexes were characterized by UV/vis spectroscopy, FT-IR spectroscopy, elemental analysis, ¹H NMR spectroscopy and XRD. Spectral titration was performed to study the inclusion behavior of the inclusion complexes. These experiments indicated that two inclusion complexes were formed at a stoichiometric ratio of 1:1 and the inclusion stability constants at different temperatures were calculated using the Benesi–Hildebrand (B–H) equation. The thermodynamic parameters (ΔG°, ΔH°, ΔS°) were obtained. As a result, it was found that the two chemically modified β-cyclodextrins containing BP were exothermic and spontaneous process (ΔG°?<?0), and the processes of inclusion complexation were mainly enthalpy driven with negative or minor negative entropic contribution.     

Spectroscopic and Isothermal Titration Calorimetry Studies of Binding Interactions Between Carbon Nanodots and Serum Albumins

Carbon nanodots (C-dots) have attracted great attention as a new class of luminescent nanomaterials. In order to better understand the basic behavior of C-dots in biological systems, the binding characteristics of C-dots with bovine serum albumin (BSA) and human serum albumin (HSA) were investigated using spectroscopic approaches and isothermal titration calorimetry at pH 7.4. We found that the intrinsic fluorescence of BSA and HSA was quenched by the C-dots with a dynamic quenching mode. It was proved that the C-dots had little influence on the conformation of BSA and HSA by their UV–vis and circular dichroism spectra. Some important thermodynamic parameters were calculated, and the positive values of ΔH° and ΔS° indicate that the binding process was endothermic, and that the interaction was driven by favorable entropy and unfavorable enthalpy. It also showed that the hydrophobic force played a major role in the binding process.     

UV Photolysis of a Re(I) Macromolecule, [(4-vinylpyridine)2(4-vinylpyridineRe(C0)3(1,10-phenanthroline)+]200: Addition of C-centered Radicals to Coordinated CO

Abstract

Proteins that bind preferentially to specific recognition sites on DNA also bind more weakly to nonspecific DNA. We have studied both specific and non-specific binding of the EcoRI and BamHI restriction endonucleases, and determined enthalpic and entropic contributions to binding free energy (ΔG°_bind) using both the van't Hoff method and isothermal titration calorimetry. Specific binding is characterized by a strongly negative ΔC°_p and can be either enthalpy-driven or entropy-driven, depending on temperature. Nonspecific binding has ΔC°_p ≈ 0 and is enthalpy-driven. A strongly negative ΔC°_p is the ?thermodynamic signature’ of site-specific binding, because it reflects the characteristics of a tight complementary recognition interface: the burial of previously hydrated nonpolar surface and restriction of configurational-vibrational freedoms of protein, DNA, and water molecules trapped at the protein-DNA interface. These factors are absent in nonspecific complexes. We probed the contributions to ΔC°_p by varying the sequence context surrounding the recognition site. As ΔG°_bind improves, ΔC°_p' ΔH° and ΔS° all become more negative, and there is a linear correlation between ΔH° and ΔS° (enthalpy-entropy compensation). Because these context variations do not change the protein-base or protein-phosphate contacts, the hydrophobic contribution or the number of trapped water molecules at the interface, we conclude that a better sequence context improves the ?goodness of fit’ in the interface and and thus increases the magnitude of the negative configurational-vibrational contribution to ΔC°_p.     

Dyes Removal from Aqueous Solution Using Wood Activated Charcoal of Bombax Cieba Tree

Thermodynamic and kinetics of adsorption of basic dyes (methylene blue and basic blue 3) on wood charcoal activated at 800 °C, prepared from Bombax Cieba (M78D) was investigated. Equilibrium data was obtained using batch method at temperatures of 10 °C to 50 °C. It was found that adsorption increase with increase in temperature. The Langmuir isotherm model describe the equilibrium of adsorption. Thermodynamic parameters such as ΔS°, ΔH° and ΔG° were calculated. From the values of ΔH° and ΔG°, it was concluded that the adsorption process is endothermic and spontaneous in nature. To determine kinetics parameter Lagergren equation was applied, and it was found that the reaction proceed through first order kinetic mechanism.     

Investigating the interaction of juglone (5-hydroxy-1, 4-naphthoquinone) with serum albumins using spectroscopic and in silico methods

The interaction between juglone at the concentration range of 10–110 µM and bovine serum albumin (BSA) or human serum albumin (HSA) at the constant concentration of 11 µM was investigated by fluorescence and UV absorption spectroscopy under physiological-like condition. Performing the experiments at different temperatures showed that the fluorescence intensity of BSA/HSA was decreased in the presence of juglone by a static quenching mechanism due to the formation of the juglone–protein complex. The binding constant for the interaction was in the order of 10³ M^?1, and the number of binding sites for juglone on serum albumins was determined to be equal to one. The thermodynamic parameters including enthalpy (ΔH), entropy (ΔS) and Gibb’s free energy (ΔG) changes were obtained by using the van’t Hoff equation. These results indicated that van der Waals force and hydrogen bonding were the main intermolecular forces stabilizing the complex in a spontaneous association reaction. Moreover, the interaction of BSA/HSA with juglone was verified by UV absorption spectra and molecular docking. The results of synchronous fluorescence, UV–visible and CD spectra demonstrated that the binding of juglone with BSA/HSA induces minimum conformational changes in the structure of albumins. The increased binding affinity of juglone to albumin observed in the presence of site markers (digoxin and ibuprofen) excludes IIA and IIIA sites as the binding site of juglone. This is partially in agreement with the results of molecular docking studies which suggests sub-domain IA of albumin as the binding site.     

Analysis of binding interaction between pegylated puerarin and bovine serum albumin by spectroscopic methods and dynamic light scattering

The interaction between bovine serum albumin (BSA) and pegylated puerarin (Pur) in aqueous solution was investigated by UV-Vis spectroscopy, fluorescence spectroscopy and circular dichroism spectra (CD), as well as dynamic light scattering (DLS). The fluorescence of BSA was strongly quenched by the binding of pegylated Pur to BSA. The binding constants and the number of binding sites of mPEG(5000)-Pur with BSA were 2.67±0.12 and 1.37±0.05 folds larger after pegylating, which were calculated from the data obtained from fluorescence quenching experiments. The enthalpy change (ΔH) and entropy change (ΔS) were calculated to be 4.09 kJ mol(-1) and 20.01 J mol(-1) K(-1), respectively, according to Van't Hoff equation, indicating that the hydrophobic force plays a main role in the binding interaction between pegylated Pur and BSA. In addition, the negative sign for Gibbs free energy change (ΔG) implies that the interaction process is spontaneous. Moreover, the results of synchronous fluorescence and CD spectra demonstrated that the microenvironment and the secondary conformation of BSA were changed. Comparing with Pur, all our data collected indicated that pegylated Pur interacted with BSA in the same way as that of Pur, but docked into the hydrophobic pocket of BSA with more accessibility and stronger binding force. DLS measurements showed monomethoxy polyethylene glycol (mPEG) have an effect on BSA conformation, and revealed that changes in BSA size might be due to increases in binding constant and the absolute values of ΔG after Pur pegylation.     

Mechanistic investigation on binding interaction of bioactive imidazole with protein bovine serum albumin--a biophysical study

The interaction between bioactive imidazole derivative (PPP) and bovine serum albumin (BSA) was investigated using fluorescence and UV-vis spectral studies. The experimental results showed that the fluorescence quenching of BSA by imidazole derivative was the result of the formation of BSA-PPP complex and the effective quenching constants (K(SV)) were 2.66×10(4), 2.56×10(4), and 2.10×10(4) at 301, 310 and 318 K, respectively. Static quenching and non-radiative energy transfer were confirmed to the result in the fluorescence quenching. The binding site number n, apparent binding constant K(A) and corresponding thermodynamic parameters (ΔG, ΔH and ΔS) were measured at different temperatures. The process of binding of PPP molecule on BSA was a spontaneous molecular interaction procedure in which entropy increased and Gibbs free energy decreased.     

Cellulose nanocrystals as promising adsorbents for the removal of cationic dyes

Cellulose nanocrystals (CNCs) prepared from cellulose fibre via sulfuric acid hydrolysis was used as an adsorbent for the removal of methylene blue (MB) from aqueous solution. The effects of pH, adsorbent dosage, temperature, ionic strength, initial dye concentration were studied to optimize the conditions for the maximum adsorption of dye. Adsorption equilibrium data was fitted to both Langmuir and Freundlich isotherm models, where the Langmuir model better described the adsorption process. The maximum adsorption capacity was 118 mg dye/g CNC at 25 °C and pH 9. Calculated thermodynamic parameters, such as free energy change (ΔG = ?20.8 kJ/mol), enthalpy change (ΔH = ?3.45 kJ/mol), and entropy change (ΔS = 0.58 kJ/mol K) indicates that MB adsorption on CNCs is a spontaneous exothermic process. Tunability of the adsorption capacity by surface modification of CNCs was shown by oxidizing the primary hydroxyl groups on the CNC surface with TEMPO reagent and the adsorption capacity was increased from 118 to 769 mg dye/g CNC.     

Study of the Interaction between <Emphasis Type="Italic">Trans</Emphasis>-resveratrol and BSA by the Multi-spectroscopic Method

The interaction of trans-resveratrol and BSA was investigated by means of fluorescence quenching, resonance light scattering, ultraviolet spectroscopy and Fourier Transform Infrared Spectroscopy. Binding of trans-resveratrol to BSA quenches the BSA fluorescence and both static and dynamic quenching occur with complex formation. The apparent binding constants of trans-resveratrol and BSA at 20, 30 and 40?°C are 1.95×10⁶, 1.70×10⁶ and 1.65×10⁶ L?mol^?1, respectively. The binding site values are (1.25±0.02). According to the Förster theory of non-radiation energy transfer, the binding distances between trans-resveratrol and BSA are 3.47, 3.73 and 3.99 nm at 20, 30 and 40?°C, respectively. The negative enthalpy change and positive entropy change indicated that the interaction of trans-resveratrol and BSA was driven mainly by electrostatic forces. The process of binding was spontaneous whereby the Gibbs energy change was negative.     

A thermodynamic study of α-, β-, and γ-cyclodextrin-complexed m-methyl red in alkaline solutions

The UV/Visible spectra of m-methyl red (m-MR) ({3-[4-(dimethyl-amino) phenylazo] benzoic acid}) were examined in basic, acidic and strongly acidic aqueous solutions. The observed spectra of m-MR were analyzed and compared with the tautomeric and resonance structures that suggested theoretically. Three isosbestic points in the spectra were observed around 508, 464 and 443 nm representing three different equilibriums between four different species of m-MR. The inclusion constant (K_f) for the inclusion of basic form of m-MR with alpha-, Beta-, and gamma-Cyclodextrin (α-, β- and γ-CD) was evaluated at different temperatures using Benesi-Hildebrand method. The values of K_f at 25 °C were found to be 8.70 × 10³, 4.93 × 10³ mol^?1 dm³ and 2.95 × 10⁷ mol^?2 dm⁶ basis on the inclusion complex ratios (m-MR:CD) of 1:1, 1:1, and 2:1 respectively. The values of the thermodynamic quantities ΔH°, ΔS°, ΔG° for the different inclusion processes were calculated by using Van’t Hoff plot. For all cases of the studied inclusion processes, these inclusions were favored through entropy and enthalpy changes.     

Structural and physical–chemical evaluation of Bradykinin Potentiating Peptide and its high soluble supramolecular complex

The supramolecular interactions between a Bradykinin Potentiating Peptide (BPP10c) and β-cyclodextrin (βCD) have been investigated by using several techniques. These new properties acquired by the inclusion phenomena are important in developing a strategy for pharmaceutical formulation. The BPP10c structural elucidation and its inclusion complex formed have been investigated using Nuclear Magnetic Resonance techniques. The peptide secondary structure was investigated using infrared spectroscopy in solution, Circular Dichroism and NMR. In addition, the thermodynamic parameters of the inclusion process were also evaluated using Isothermal Titration Calorimetry. The results obtained by these physical–chemical techniques suggested a 1:1 complex formed by interaction between the Tryptophan amino acid residue and the βCD cavity. The peptide secondary structure was not substantially modified for the inclusion process. In addition, the inclusion process proved to be spontaneous (ΔGº = ?2.53 kcal mol^?1), with an enthalpy reduction (ΔHº = ?3.72 kcal mol^?1) and a favored entropic variation (TΔSº = ?1.19 kcal mol^?1).     

WO3 thermodynamic properties at 80–1256 K revisited

Journal of Thermal Analysis and Calorimetry - Thermodynamic properties (heat capacity Cp, entropy S°, enthalpy change ΔH° and reduced Gibbs energy ΔΦ°) of crystalline...     

Investigation of the Interaction Between Novel Spiro Thiazolo[3,2-a][1,3,5]Triazines and Bovine Serum Albumin by Spectroscopic Methods

The interaction between novel spiro thiazolo[3,2-a][1,3,5]triazines (NSTT) and bovine serum albumin (BSA) was investigated using fluorescence and ultraviolet spectroscopy at different temperatures (302 and 310 K) under imitated physiological conditions. The experimental results show that the fluorescence quenching mechanism between NSTT and BSA is by a static quenching mechanism. The binding constant (K _a) and number of binding sites (n) between NSTT and BSA at different temperatures were obtained. Negative values of ?G°, ?H°, and ?S° indicate that the interaction between NSTT and BSA is driven by hydrogen bonds and van der Waals forces. Using the Förster non-radiation energy transfer theory, the binding distance between BSA and NSTT was calculated. These results provide valuable information on the interaction between NSTT and BSA as well as the influence of substituent groups on the interaction.     

Investigation of the Interaction between N,N′‐Di(4‐Chlorophenyl)Thiourea and Human Serum Albumin by Fluorescence Spectroscopy: Synchronous Fluorescence Determination of Human Serum Albumin

Under physiological conditions, interaction between N,N′‐di(4‐chlorophenyl)thiourea synthesized and human serum albumin was investigated by using fluorescence spectroscopy and UV absorption spectrum. The intrinsic fluorescence of human serum albumin was quenched by N,N′‐di(4‐chlorophenyl)‐thiourea through a static quenching procedure. The binding constants (K) at 14 °C and 24 °C were obtained, and the values were 2.541 × 10⁵ M^?1 and 2.021 × 10⁵ M^?1, respectively. Thermodynamic parameter enthalpy change (ΔH) and entropy change (ΔS) were calculated to be ‐16.19 KJ/mol and 47.05 J·mol¹·K^?1, respectively, which indicated that hydrophobic force played a major role in interaction. The binding distance was evaluated on the basis of the theory of Föster energy transfer. The effects of various metal ions on the binding constants of N,N′‐di(4‐chlorophenyl)thiourea with human serum albumin were studied. A synchronous fluorescence technique for determination of human serum albumin was developed, and the method was successfully applied to the detection of HSA in human serum samples.     

Structural relationship and binding mechanisms of five flavonoids with bovine serum albumin

Flavonoids are structurally diverse and the most ubiquitous groups of dietary polyphenols distributed in various fruits and vegetables. In this study, the interaction between five flavonoids, namely formononetin-7-O-β-D-glucoside, calycosin- 7-O-β-D-glucoside, calycosin, rutin, and quercetin, and bovine serum albumin (BSA) was investigated by fluorescence and UV-vis absorbance spectroscopy. In the discussion, it was proved that the fluorescence quenching of BSA by flavonoids was a result of the formation of a flavonoid-BSA complex. Fluorescence quenching constants were determined using the Stern-Volmer and Lineweaver-Burk equations to provide a measure of the binding affinity between the flavonoids and BSA. The binding constants ranked in the order quercetin>rutin>calycosin>calycosin-7-O-β-D-glucoside ≈ formononetin-7-O-β-D-glucoside. The results of thermodynamic parameters ΔG, ΔH, and ΔS at different temperatures indicated that the hydrophobic interaction played a major role in flavonoid-BSA association. The distance r between BSA and acceptor flavonoids was also obtained according to F?rster's theory of non-radiative energy transfer.