Embedding wave function theory in density functional theory

We present a framework for embedding a highly accurate coupled-cluster calculation within a larger density functional calculation. We use a perturbative buffer to help insulate the coupled-cluster region from the rest of the system. Regions are defined, not in real space, but in Hilbert space, though connection between the two can be made by spatial localization of single-particle orbitals. Relations between our embedding approach and some similar techniques are discussed. We present results for small sample systems for which we can extract essentially exact results, demonstrating that our approach seems to work quite well and is generally more reliable than some of the related approaches due to the introduction of additional interaction terms.     

Adiabatic approximation of time-dependent density matrix functional response theory

Time-dependent density matrix functional theory can be formulated in terms of coupled-perturbed response equations, in which a coupling matrix K(omega) features, analogous to the well-known time-dependent density functional theory (TDDFT) case. An adiabatic approximation is needed to solve these equations, but the adiabatic approximation is much more critical since there is not a good "zero order" as in TDDFT, in which the virtual-occupied Kohn-Sham orbital energy differences serve this purpose. We discuss a simple approximation proposed earlier which uses only results from static calculations, called the static approximation (SA), and show that it is deficient, since it leads to zero response of the natural orbital occupation numbers. This leads to wrong behavior in the omega-->0 limit. An improved adiabatic approximation (AA) is formulated. The two-electron system affords a derivation of exact coupled-perturbed equations for the density matrix response, permitting analytical comparison of the adiabatic approximation with the exact equations. For the two-electron system also, the exact density matrix functional (2-matrix in terms of 1-matrix) is known, enabling testing of the static and adiabatic approximations unobscured by approximations in the functional. The two-electron HeH(+) molecule shows that at the equilibrium distance, SA consistently underestimates the frequency-dependent polarizability alpha(omega), the adiabatic TDDFT overestimates alpha(omega), while AA improves upon SA and, indeed, AA produces the correct alpha(0). For stretched HeH(+), adiabatic density matrix functional theory corrects the too low first excitation energy and overpolarization of adiabatic TDDFT methods and exhibits excellent agreement with high-quality CCSD ("exact") results over a large omega range.     

Open-shell reduced density matrix functional theory

Open-shell reduced density matrix functional theory is established by investigating the domain of the exact functional. For spin states that are the ground state, a particularly simple set is found to be the domain. It cannot be generalized to other spin states. A number of conditions satisfied by the exact density matrix functional is formulated and tested for approximate functionals. The exact functional does not suffer from fractional spin error, which is the source of the static correlation error in dissociated molecules. We prove that a simple approximation (called the Buijse-Baerends functional, Mu?ller or square root functional) has a non-positive fractional spin error. In the case of the H atom the error is zero. Numerical results for a few atoms are given for approximate density and density matrix functionals as well as a recently developed range-separated combination of both.     

Phase dilemma in density matrix functional theory

For closed-shell systems, a particular parametrization of coefficients in a configuration interaction (CI) expansion provides a convenient formulation for the search over electronic wave functions constrained by a set of natural orbitals (NOs) and the corresponding occupation numbers that are invoked in every variational construction of the density matrix functional (DMF) V(ee)(Gamma) for the electron--electron repulsion energy. It produces an explicit expression for V(ee) in terms of the Coulomb and exchange integrals over NOs, and an idempotent matrix omega, diagonal elements of which equal the occupation numbers. At the same time, it reveals a very serious bottleneck affecting any rigorous approach to the DMF theory, namely the phase dilemma that stems from the necessity to carry out minimization over a large number of possible combinations of CI coefficient signs. While underscoring its lack of variational nature, a simple approximation for the phase factor products provides a strict derivation for the recently proposed Kollmar-Hess functional.     

Effective potential in density matrix functional theory

In the previous paper it was shown that in the ground state the diagonal of the spin independent second-order density matrix n can be determined by solving a single auxiliary equation of a two-particle problem. Thus the problem of an arbitrary system with even electrons can be reduced to a two-particle problem. The effective potential of the two-particle equation contains a term v(p) of completely kinetic origin. Virial theorem and hierarchy of equations are derived for v(p) and simple approximations are proposed. A relationship between the effective potential u(p) of the shape function equation and the potential v(p) is established.     

The adiabatic approximation in time-dependent density matrix functional theory: response properties from dynamics of phase-including natural orbitals

The adiabatic approximation is problematic in time-dependent density matrix functional theory. With pure density matrix functionals (invariant under phase change of the natural orbitals) it leads to lack of response in the occupation numbers, hence wrong frequency dependent responses, in particular α(ω→0)≠α(0) (the static polarizability). We propose to relinquish the requirement that the functional must be a pure one-body reduced density matrix (1RDM) functional, and to introduce additional variables which can be interpreted as phases of the one-particle states of the independent particle reference system formed with the natural orbitals, thus obtaining so-called phase-including natural orbital (PINO) functionals. We also stress the importance of the correct choice of the complex conjugation in the two-electron integrals in the commonly used functionals (they should not be of exchange type). We demonstrate with the Lo?wdin-Shull energy expression for two-electron systems, which is an example of a PINO functional, that for two-electron systems exact responses (polarizabilities, excitation energies) are obtained, while writing this energy expression in the usual way as a 1RDM functional yields erroneous responses.     

Excitation energies from range-separated time-dependent density and density matrix functional theory

Time-dependent density functional theory (TD-DFT) in the adiabatic formulation exhibits known failures when applied to predicting excitation energies. One of them is the lack of the doubly excited configurations. On the other hand, the time-dependent theory based on a one-electron reduced density matrix functional (time-dependent density matrix functional theory, TD-DMFT) has proven accurate in determining single and double excitations of H(2) molecule if the exact functional is employed in the adiabatic approximation. We propose a new approach for computing excited state energies that relies on functionals of electron density and one-electron reduced density matrix, where the latter is applied in the long-range region of electron-electron interactions. A similar approach has been recently successfully employed in predicting ground state potential energy curves of diatomic molecules even in the dissociation limit, where static correlation effects are dominating. In the paper, a time-dependent functional theory based on the range-separation of electronic interaction operator is rigorously formulated. To turn the approach into a practical scheme the adiabatic approximation is proposed for the short- and long-range components of the coupling matrix present in the linear response equations. In the end, the problem of finding excitation energies is turned into an eigenproblem for a symmetric matrix. Assignment of obtained excitations is discussed and it is shown how to identify double excitations from the analysis of approximate transition density matrix elements. The proposed method used with the short-range local density approximation (srLDA) and the long-range Buijse-Baerends density matrix functional (lrBB) is applied to H(2) molecule (at equilibrium geometry and in the dissociation limit) and to Be atom. The method accounts for double excitations in the investigated systems but, unfortunately, the accuracy of some of them is poor. The quality of the other excitations is in general much better than that offered by TD-DFT-LDA or TD-DMFT-BB approximations if the range-separation parameter is properly chosen. The latter remains an open problem.     

The structure of the second-order reduced density matrix in density matrix functional theory and its construction from formal criteria

Some formal requirements for the second-order reduced density matrix are discussed in the context of density matrix functional theory. They serve as a basis for the ad hoc construction of the second-order reduced density matrix in terms of the first-order reduced density matrix and lead to implicit functionals where the occupation numbers of the natural orbitals are obtained as diagonal elements of an idempotent matrix the elements of which represent the variational parameters to be optimized. The numerical results obtained from a first realization of such an implicit density matrix functional give excellent agreement with the results of full configuration interaction calculations for four-electron systems like LiH and Be. Results for H2O taken as an example for a somewhat larger molecule are numerically less satisfactory but still give reasonable occupation numbers of the natural orbitals and indicate the capability of density matrix functional theory to cope with static electron correlation.     

Protein-ligand interaction energies with dispersion corrected density functional theory and high-level wave function based methods

With dispersion-corrected density functional theory (DFT-D3) intermolecular interaction energies for a diverse set of noncovalently bound protein-ligand complexes from the Protein Data Bank are calculated. The focus is on major contacts occurring between the drug molecule and the binding site. Generalized gradient approximation (GGA), meta-GGA, and hybrid functionals are used. DFT-D3 interaction energies are benchmarked against the best available wave function based results that are provided by the estimated complete basis set (CBS) limit of the local pair natural orbital coupled-electron pair approximation (LPNO-CEPA/1) and compared to MP2 and semiempirical data. The size of the complexes and their interaction energies (ΔE(PL)) varies between 50 and 300 atoms and from -1 to -65 kcal/mol, respectively. Basis set effects are considered by applying extended sets of triple- to quadruple-ζ quality. Computed total ΔE(PL) values show a good correlation with the dispersion contribution despite the fact that the protein-ligand complexes contain many hydrogen bonds. It is concluded that an adequate, for example, asymptotically correct, treatment of dispersion interactions is necessary for the realistic modeling of protein-ligand binding. Inclusion of the dispersion correction drastically reduces the dependence of the computed interaction energies on the density functional compared to uncorrected DFT results. DFT-D3 methods provide results that are consistent with LPNO-CEPA/1 and MP2, the differences of about 1-2 kcal/mol on average (<5% of ΔE(PL)) being on the order of their accuracy, while dispersion-corrected semiempirical AM1 and PM3 approaches show a deviating behavior. The DFT-D3 results are found to depend insignificantly on the choice of the short-range damping model. We propose to use DFT-D3 as an essential ingredient in a QM/MM approach for advanced virtual screening approaches of protein-ligand interactions to be combined with similarly "first-principle" accounts for the estimation of solvation and entropic effects.     

Comparison of some representative density functional theory and wave function theory methods for the studies of amino acids

Energies of different conformers of 22 amino acid molecules and their protonated and deprotonated species were calculated by some density functional theory (DFT; SVWN, B3LYP, B3PW91, MPWB1K, BHandHLYP) and wave function theory (WFT; HF, MP2) methods with the 6-311++G(d,p) basis set to obtain the relative conformer energies, vertical electron detachment energies, deprotonation energies, and proton affinities. Taking the CCSD/6-311++G(d,p) results as the references, the performances of the tested DFT and WFT methods for amino acids with various intramolecular hydrogen bonds were determined. The BHandHLYP method was the best overall performer among the tested DFT methods, and its accuracy was even better than that of the more expensive MP2 method. The computational dependencies of the five DFT methods and the HF and MP2 methods on the basis sets were further examined with the 6-31G(d,p), 6-311++G(d,p), aug-cc-pVDZ, 6-311++G(2df,p), and aug-cc-pVTZ basis sets. The differences between the small and large basis set results have decreased quickly for the hybrid generalized gradient approximation (GGA) methods. The basis set convergence of the MP2 results has been, however, very slow. Considering both the cost and the accuracy, the BHandHLYP functional with the 6-311++G(d,p) basis set is the best choice for the amino acid systems that are rich in hydrogen bonds.     

Adiabatic corrections to density functional theory energies and wave functions

The adiabatic finite-nuclear-mass-correction (FNMC) to the electronic energies and wave functions of atoms and molecules is formulated for density-functional theory and implemented in the deMon code. The approach is tested for a series of local and gradient corrected density functionals, using MP2 results and diagonal-Born-Oppenheimer corrections from the literature for comparison. In the evaluation of absolute energy corrections of nonorganic molecules the LDA PZ81 functional works surprisingly better than the others. For organic molecules the GGA BLYP functional has the best performance. FNMC with GGA functionals, mainly BLYP, show a good performance in the evaluation of relative corrections, except for nonorganic molecules containing H atoms. The PW86 functional stands out with the best evaluation of the barrier of linearity of H2O and the isotopic dipole moment of HDO. In general, DFT functionals display an accuracy superior than the common belief and because the corrections are based on a change of the electronic kinetic energy they are here ranked in a new appropriate way. The approach is applied to obtain the adiabatic correction for full atomization of alcanes C(n)H(2n+2), n = 4-10. The barrier of 1 mHartree is approached for adiabatic corrections, justifying its insertion into DFT.     

On the importance of the "density per particle" (shape function) in the density functional theory

The central role of the shape function sigma(r) from the density functional theory (DFT), the ratio of the electron density rho(r) and the number of electrons N of the system (density per particle), is investigated. Moreover, its relationship with DFT based reactivity indices is established. In the first part, it is shown that an estimate for the chemical hardness can be obtained from the long range behavior of the shape function and its derivative with respect to the number of electrons at a fixed external potential. Next, the energy of the system is minimized with the constraint that the shape function should integrate to unity; the associated Lagrange multiplier is shown to be related to the electronic chemical potential micro of the system. Finally, the importance of the shape function for both molecular structure, reactivity, and similarity is outlined.     

Polarizability and chemical hardness—A combined study of wave function and density functional theory approach

A flexible model for generating the molecular wave function and electron density for diatomic molecules is developed employing the quadratic anharmonic oscillator and Morse potential. The chemical hardness, Fukui function, and polarizability were calculated using the electron density of the molecules, and the values are found to be reasonably good. © 2001 John Wiley & Sons, Inc. Int J Quantum Chem, 2001     

Electronic coupling matrix elements from charge constrained density functional theory calculations using a plane wave basis set

We present a plane wave basis set implementation for the calculation of electronic coupling matrix elements of electron transfer reactions within the framework of constrained density functional theory (CDFT). Following the work of Wu and Van Voorhis [J. Chem. Phys. 125, 164105 (2006)], the diabatic wavefunctions are approximated by the Kohn-Sham determinants obtained from CDFT calculations, and the coupling matrix element calculated by an efficient integration scheme. Our results for intermolecular electron transfer in small systems agree very well with high-level ab initio calculations based on generalized Mulliken-Hush theory, and with previous local basis set CDFT calculations. The effect of thermal fluctuations on the coupling matrix element is demonstrated for intramolecular electron transfer in the tetrathiafulvalene-diquinone (Q-TTF-Q(-)) anion. Sampling the electronic coupling along density functional based molecular dynamics trajectories, we find that thermal fluctuations, in particular the slow bending motion of the molecule, can lead to changes in the instantaneous electron transfer rate by more than an order of magnitude. The thermal average, (<|H(ab)|(2)>)(1/2)=6.7 mH, is significantly higher than the value obtained for the minimum energy structure, |H(ab)|=3.8 mH. While CDFT in combination with generalized gradient approximation (GGA) functionals describes the intermolecular electron transfer in the studied systems well, exact exchange is required for Q-TTF-Q(-) in order to obtain coupling matrix elements in agreement with experiment (3.9 mH). The implementation presented opens up the possibility to compute electronic coupling matrix elements for extended systems where donor, acceptor, and the environment are treated at the quantum mechanical (QM) level.     

The calculation of NMR shielding tensors based on density functional theory and the frozen-core approximation

The application of the frozen-core approximation to the calculation of the shielding tensor of nuclear magnetic resonance (NMR) spectroscopy is discussed and an implementation is presented. A complete formulation of the shielding calculation within the frozen-core approximation is given, both in general terms and for the special case of density functional theory (DFT) and “gauge including atomic orbitals” (GIAOs). The practical implementation is validated by a detailed discussion of the consequences of the approximation. The general conclusion is drawn that the frozen-core approximation is a useful tool for shielding calculations—if the valence space is increased to contain at least the ns, np, (n − 1)p, (n − 1)d (fourth period and higher) shells, where n is the number of the given period in the periodic table of elements. The new method is applied to ⁷⁷Se shieldings and chemical shifts for a small number of compounds. The agreement between theory and experiment is good for relative shifts, whereas calculated absolute shieldings are generally too small by about 300–400 ppm. This difference is attributed to the relativistic contraction of the core density at the selenium atom that had been explicitly incorporated into the experimental absolute shielding scale. © 1996 John Wiley & Sons, Inc.     

Projected gradient algorithms for Hartree-Fock and density matrix functional theory calculations

We present projected gradient algorithms designed for optimizing various functionals defined on the set of N-representable one-electron reduced density matrices. We show that projected gradient algorithms are efficient in minimizing the Hartree-Fock or the Muller-Buijse-Baerends functional. On the other hand, they converge very slowly when applied to the recently proposed BBk (k=1,2,3) functionals [O. Gritsenko et al., J. Chem. Phys. 122, 204102 (2005)]. This is due to the fact that the BBk functionals are not proper functionals of the density matrix.     

密度矩阵旋转法 - 绕过波函数直接求密度矩阵

本文首次提出了一种直接求闭壳层体系密度矩阵的方法 - 密度矩阵旋转法(PMatrix Botanon method). PMR法的特点是不必象自洽场法(SCF)那样解HFR方程,也不必象分子轨道酉变换法(UTMO)那样考虑分子轨道系数,而是绕过波函数直接求体系的密度矩阵,进而从密度矩阵求出体系的所有性质,PMR法能够保证求解过程收敛,克服了传统的HFR-SCF法不能保证收敛的根本缺点.此外,PMR法的计算比SCF法和UTMO法更简便.在CNDO/2近似下,比较了PMR,UTMO和SCF三种方法的计算结果,表明PMR法较优越。     

Performance of the density matrix functional theory in the quantum theory of atoms in molecules

The generalization to arbitrary molecular geometries of the energetic partitioning provided by the atomic virial theorem of the quantum theory of atoms in molecules (QTAIM) leads to an exact and chemically intuitive energy partitioning scheme, the interacting quantum atoms (IQA) approach, that depends on the availability of second-order reduced density matrices (2-RDMs). This work explores the performance of this approach in particular and of the QTAIM in general with approximate 2-RDMs obtained from the density matrix functional theory (DMFT), which rests on the natural expansion (natural orbitals and their corresponding occupation numbers) of the first-order reduced density matrix (1-RDM). A number of these functionals have been implemented in the promolden code and used to perform QTAIM and IQA analyses on several representative molecules and model chemical reactions. Total energies, covalent intra- and interbasin exchange-correlation interactions, as well as localization and delocalization indices have been determined with these functionals from 1-RDMs obtained at different levels of theory. Results are compared to the values computed from the exact 2-RDMs, whenever possible.     

The weizsacker term in density functional theory

A general expression for the first-order reduced density matrix suggested by its form in terms of the natural spin orbitals is used to show that the Weizsacker term is a natural component of the exact kinetic energy density functional.