A flexible copper(I)-complexed [4]rotaxane containing two face-to-face porphyrinic plates that behaves as a distensible receptor

A new cyclic [4]rotaxane composed of two flexible bis-macrocycles and two rigid axles is described. Each bis-macrocycle consists of two rings attached to antipodal meso positions of a central Zn porphyrin through single C-C bonds. Each ring incorporates a 2,9-diphenyl-1,10-phenanthroline chelation site. The axles contain two coplanar bidentate sites derived from the 2,2'-bipyridine motif. The building blocks were assembled by using a one-pot threading-and-stoppering reaction, which afforded the [4]rotaxane in 50% yield. The "gathering-and-threading" effect of copper(I) was utilised in the formation of a [4]pseudorotaxane, which was immediately converted to the corresponding [4]rotaxane by a quadruple CuAAC stoppering reaction. The rotaxane contains two face-to-face zinc porphyrins, which allowed the coordination of ditopic guest substrates. The rotaxane host showed remarkable flexibility and was able to adjust its conformation to the guest size. It can be distended and accommodate rod-like guests of 2.6 to 15.8 ? in length.     

A fluorophoric-axle-based, nonfluororescent, metallo anti-[3]pseudorotaxane: recovery of fluorescence by means of an axle substitution reaction

A Cu(2+)-templated, multinuclear, nonfluorescent, anti-[3]pseudorotaxane was synthesized on a fluorophoric axle. The Cu(2+)-templated [3]pseudorotaxane was characterized by the electrospray ionization mass spectroscopy (ESI-MS), UV/Vis and EPR spectroscopy, and single-crystal X-ray data. The ESI-MS showed peaks that support the formation of [3]pseudorotaxane. The UV/Vis spectrum of [3]pseudorotaxane in CH(3)CN showed a characteristic d-d band of a Cu(2+) complex at 650 nm. Further, the X-band in the EPR spectrum of [3]pseudorotaxane suggested a distorted square-pyramidal geometry of Cu(2+). Importantly, formation of the [3]pseudorotaxane was confirmed by the single-crystal X-ray structural analysis, which showed that one fluorophoric axle was threaded into two Cu(2+) macrocyclic wheels (MC-Cu(2+)) with an anti conformation. The UV/Vis and fluorescence titration experiments were carried out to follow the solution-state formation of [3]pseudorotaxane by MC-Cu(2+) and fluorophoric axle in CH(3)CN. In both studies, the sigmoidal curve fit supported the formation of 1:2 complex of the fluorophoric axle and MC-Cu(2+) complex. Secondly, the release of the fluorophoric axle from the nonfluorescent [3]pseudorotaxane through the formation of a [2]pseudorotaxane was demonstrated by titrating a solution of the [3]pseudorotaxane with a stronger bidentate chelating ligand, such as 1,10-phenanthroline (Phen). Substitution of the fluorophoric axle from the [3]pseudorotaxane with about 100% efficiency was achieved by the addition of approximately two equivalents of Phen, and the formation of a Phen-threaded [2]pseudorotaxane was established by ESI-MS of the resulting solution and a single-crystal X-ray study. Axle substitution was also confirmed by a fluorescence titration experiment, which showed a step-wise recovery of the fluorescence intensity of the fluorophoric axle. The association constants for the formation of the [3]- and [2]pseudrotaxanes were calculated from the fluorescence and UV/Vis data. In addition, 2,2'-bipyridine (BPy), which is a relatively weaker bidendate chelating ligand compared to Phen, showed an inefficient and incomplete axle substitution of the [3]pseudorotaxane, although BPy previously showed the formation of [2]pseudrotaxane with the MC-Cu(2+) wheel in solution and ESI-MS studies. In this context, the formation of a BPy-threaded [2]pseudrotaxane was further established by single-crystal X-ray diffraction study.     

A Flexible Copper(I)‐Complexed [4]Rotaxane Containing Two Face‐to‐Face Porphyrinic Plates that Behaves as a Distensible Receptor

A new cyclic [4]rotaxane composed of two flexible bis‐macrocycles and two rigid axles is described. Each bis‐macrocycle consists of two rings attached to antipodal meso positions of a central Zn porphyrin through single C? C bonds. Each ring incorporates a 2,9‐diphenyl‐1,10‐phenanthroline chelation site. The axles contain two coplanar bidentate sites derived from the 2,2′‐bipyridine motif. The building blocks were assembled by using a one‐pot threading‐and‐stoppering reaction, which afforded the [4]rotaxane in 50 % yield. The “gathering‐and‐threading” effect of copper(I) was utilised in the formation of a [4]pseudorotaxane, which was immediately converted to the corresponding [4]rotaxane by a quadruple CuAAC stoppering reaction. The rotaxane contains two face‐to‐face zinc porphyrins, which allowed the coordination of ditopic guest substrates. The rotaxane host showed remarkable flexibility and was able to adjust its conformation to the guest size. It can be distended and accommodate rod‐like guests of 2.6 to 15.8 Å in length.     

Formation of copper(I)-templated [2]rotaxanes using ��click�� methodology: influence of the base, the thread and the catalyst

Three new copper(I)-assembled [2]rotaxanes incorporating the same macrocycle and different axes containing a bipy, a phen or a terpy have been synthesized thanks to CuAAC reaction for attaching the stoppers. The influence of the nature of the base used for the stoppering reaction was investigated on the formation of the bipy-containing rotaxane. The yield of the [2]rotaxane synthesis was increased when using a phen as a coordinating unit in the thread with [Cu(CH₃CN)₄](PF₆) as catalyst. The strong influence of the nature of the catalyst was clearly evidenced for the formation of the terpy rotaxane, increasing the yield of the stoppering reaction from 0 to 95% by just substituting the Cu(I) catalyst. Finally, the best conditions found for our systems are the use of Na₂CO₃ as a base and Cu(tren??)Br as a catalyst.     

Controlled molecular motions in copper-complexed rotaxanes: an XAS study

The environment of the central metal of a molecular machine-like copper rotaxane was observed by XAS experiments. The wheel of the rotaxane is a hetero-bischelating macrocycle containing both bidentate (phenanthroline) and terdentate (terpyridine) moieties. The axle of the assembly contains only a bidentate moiety. Applying an external chemical stimulus-oxidation of the metal-increases the number of coordinating atoms required by the metal template from 4 to 5. This variation is consistent with the oscillation of the wheel around the axle, leading thus to the most stable environment for the metal in the Cu(II) rotaxane.     

Nitrite‐Templated Synthesis of Lanthanide‐Containing [2]Rotaxanes for Anion Sensing

The first anion‐templated synthesis of a lanthanide‐containing interlocked molecule is demonstrated by utilizing a nitrite anion to template initial pseudorotaxane formation. Subsequent stoppering of the interpenetrated assembly allows for the preparation of a lanthanide‐functionalized [2]rotaxane in high yield. Following removal of the nitrite anion template, the europium [2]rotaxane host is demonstrated to recognize and sense fluoride selectively.     

The Effect of Incorporating Fréchet Dendrons into Rotaxanes and Molecular Shuttles Containing the 1,2‐Bis(pyridinium)ethane⊂[24]Crown‐8 Templating Motif

Fréchet‐type dendrons (G0–G3) were added as both axle stoppering units and cyclic wheel appendages in a series of [2]rotaxanes, [3]rotaxanes, and molecular shuttles that employ 1,2‐bis(pyridinium)ethane axles and 24‐membered crown ethers wheels. The addition of dendrimer wedges as stoppering units dramatically increased the solubility of simple [2]rotaxanes in nonpolar solvents. The X‐ray structure of a G1‐stoppered [2]rotaxane shows how the dendritic units affect the structure of the interlocked components. Increased solubility allows observation of how the interaction of dendritic units on separate components in interlocked molecules influences switching properties and molecular size. In a series of [2]rotaxane molecular shuttles incorporating two recognition sites, it was demonstrated that an increase in generation on either the stoppering unit or cyclic wheel could influence both the rate of shuttling and the site preference of the wheel on the axle.     

Unidirectional threading of triphenylureidocalix[6]arene-based wheels: oriented pseudorotaxane synthesis

Triphenylureidocalix[6]arenes 5 a,b are heteroditopic receptors having a pinched cone structure able to interact with both the cation and the anion of ion pairs. They are able to act as wheels and form complexes of the pseudorotaxane type with axles derived from dialkylviologen salts. An investigation into the possibility of exploiting the different structural and chemical information present on the two distinct rims of the calixarene wheel as control elements to pivot the direction of the axle threading processes and give access to oriented pseudorotaxanes is reported. It was verified that, in C(6)D(6), an asymmetric dicationic axle derived from 4,4'-bipyridil bearing two alkyl chains, one of which has a stopper, and triphenylureidocalix[6]arenes 5 a or 5 b form 1:1 supramolecular complexes belonging to the class of pseudorotaxanes. The structure of these complexes has been inferred through (1)H NMR techniques. The data show that the axle accesses the calixarene cavity only through the wider rim. To further verify this issue, the new rotaxane 8, obtained by stoppering the pseudorotaxane derived from 5 b and the symmetrical axle 7 with diphenylacetyl chloride, was synthesised. In the (1)H NMR spectrum of 8, the aliphatic protons of the axle portion that resides at the wide rim of the wheel show chemical shifts that are almost identical to those observed in pseudorotaxanes 6. On the other hand, those that stick out of the narrow rim of 8 experience chemical shifts that could not be found in the oriented pseudorotaxanes 6.     

Use of Cleavable Coordinating Rings as Protective Groups in the Synthesis of a Rotaxane with an Axis that Incorporates More Chelating Groups Than Threaded Macrocycles

A new methodology allowing preparation of a linear “unsaturated” [3]rotaxane consisting of an axis incorporating more coordination sites than threaded rings was developed. It was based on the preliminary synthesis of a “saturated” [5]rotaxane consisting of a four‐chelating site axis threaded through four macrocyclic components, two of them being cleavable rings incorporating a lactone function and the two others being “secure” non‐cleavable rings. The stoppering reaction was based on click chemistry. Subsequently, cleavage and removal of the two lactone‐containing macrocycles from the [5]rotaxane in basic medium afforded the desired “unsaturated” [3]rotaxane in quantitative yield.     

Insights into the Difference Between Rotaxane and Pseudorotaxane

Rotaxane and pseudorotaxane are two types of mechanically interlocked molecular architectures, and there is a clear topological difference and boundary between them. In this work, a “suggested [2]rotaxane 1 ⊂α‐CD” was constructed based on axle molecule 1 bearing two terminal ferrocene groups and a wheel component α‐cyclodextrin (α‐CD), but the result obtained indicated that the ferrocene group cannot prevent α‐CD dethreading under UV irradiation. That is, 1 ⊂α‐CD is just a pseudo[2]rotaxane. Furthermore, the two ferrocene groups in 1 ⊂α‐CD were encapsulated by two cucurbit[7]uril (CB[7]) units to obtain a heteropseudo[4]rotaxane 1 ⊂α‐CD⋅2CB[7]. This heteropseudo[4]rotaxane displayed high stability towards harsh temperatures and the isomerization of azobenzene in 1 , so it can be regarded as a [2]rotaxane. In this [2]rotaxane, the stoppers are not the bulky groups covalently bonded to the axle, but the cyclic CB[7] units connected through noncovalent interactions.     

Copper(I)-assembled [3]rotaxane whose two rings act as flapping wings

A new copper-complexed [3]rotaxane consisting of two coordinating 30-membered rings threaded by a two-binding-site axis has been prepared in good yield from relatively simple organic fragments. The main specificity of the system originates from the stoppering reaction, based on "click" chemistry, and thus from the presence of two triazole groups at positions next to the bidentate chelates of the axis central part. The geometry of the coordinating atoms belonging to the axis is such that the triazole groups can either be part of the coordinating fragments when the metal center is 5-coordinate or be not at all involved in coordination to the metal when the latter is 4-coordinate. To be more specific, when the two complexed metal centers are monovalent copper(I) centers, the triazoles are not included in the metal coordination sphere, whereas when the metal centers are Cu(II) or Zn(2+), the triazole groups are bound to the metals. This is easily explained by the fact that Cu(I) is preferably 4-coordinate and Cu(II) and Zn(2+) are 5-coordinate. The interconversion between both situations (4- or 5-coordinate) can be quantitatively induced by metal exchange (Cu(I)/Zn(2+)) or by a redox process (Cu(II)/Cu(I)). It leads to important geometrical changes and in particular to a strong modification of the angle between the two rings. As a consequence, the two threaded rings undergo a motion which is reminiscent of a wing-flapping movement similar to that of birds. This flapping motion is fast and quantitative. It should lead to new functional molecular machines in the future.     

Reversing a rotaxane recognition motif: threading oligoethylene glycol derivatives through a dicationic cyclophane

An already well-established recognition motif-namely one in which the NH2+ centers in the rod sections of the dumbbell components of rotaxanes are encircled by macrocyclic polyether components-has been turned simultaneously outside-in and inside-out, a fact that has been proved beyond any doubt by the stoppering of both ends of a [2]pseudorotaxane to give a stable [2]rotaxane. The [2]pseudorotaxane is formed in nitromethane when a benzylic dibromide, obtained after reacting an excess of 1,4-bis(bromomethyl)benzene with hexaethylene glycol, is added to an equimolar amount of a dicationic cyclophane in which two -CH2OCH2- chains link a pair of dibenzylammonium ions through the para positions on their phenyl rings. When the [2]pseudorotaxane is reacted in nitromethane with triphenylphosphine, a [2]rotaxane and the corresponding free dumbbell compound are isolated in 58 and 31% yields, respectively. The structure of the [2]rotaxane is established by using mass spectrometry (FABMS and ESMS) and NMR (1H and 13C) spectroscopy in nitromethane-d3. The [2]rotaxane exhibits quite dramatic changes in the 1H chemical shifts of the signals for its CH2N+ and CH2O protons compared with those in the free dumbbell compound. The 1H NMR spectrum of the [2]pseudorotaxane shows many similar features. Titration experiments with three of the six different CH2O probes give an average Ka value of 2900 +/- 750 M-1 in nitromethane-d3. The new recognition motif for the template-directed synthesis of rotaxanes can now be exploited at both the molecular and macromolecular levels of structure with numerous potential applications in sight.     

Rotaxanes and pseudorotaxanes with Fe-, Pd- and Pt-containing axles. Molecular motion in the solid state and aggregation in solution

This article reviews our recent studies on structure and properties of rotaxanes and pseudorotaxanes with Fe-, Pd- and Pt-containing complexes as the axle component. Electrochemical oxidation of ferrocenylmethylamine in the presence of a hydrogen radical precursor induces formal protonation of the amino group and produces a pseudorotaxane of the resulting ammonium species with a crown ether. Single crystals of the ferrocene-containing pseudorotaxane undergo a thermal crystalline phase transition accompanied by changes in the optical properties of the crystals. X-Ray crystallographic studies of the low- and high-temperature phases revealed different intermolecular interactions and orientations of the aromatic rings in the crystalline state depending on the temperature. End-capping of the ferrocene-containing [2]pseudorotaxane using a cross-metathesis reaction yields [2]rotaxane under mild conditions. A rotaxane having a platinum-carboxylate complex as its axle is converted into related organic and inorganic rotaxanes by partial dissociation of the Pt-O bond. An N-alkylbipyridinium forms [3]pseudorotaxane with alpha-cyclodextrin (alpha-CD), and it reacts with platinum and palladium complexes to form the corresponding [5]rotaxanes containing four alpha-cyclodextrin moieties. Complexes without alpha-CD components form micelles in aqueous solution, while the addition of alpha-CD causes degradation of the micelles and the formation of rotaxanes.     

Active Esters as Pseudostoppers for Slippage Synthesis of [2]Pseudorotaxane Building Blocks: A Straightforward Route to Multi‐Interlocked Molecular Machines

The efficient synthesis and very easy isolation of dibenzo[24]crown‐8‐based [2]pseudorotaxane building blocks that contain an active ester motif at the extremity of the encircled molecular axle and an ammonium moiety as a template for the dibenzo[24]crown‐8 is reported. The active ester acts both as a semistopper for the [2]pseudorotaxane species and as an extensible extremity. Among the various investigated active ester moieties, those that allow for the slippage process are given particular focus because this strategy produces fewer side products. Extension of the selected N‐hydroxysuccinimide ester based pseudorotaxane building block by using either a mono‐ or a diamino compound, both containing a triazolium moiety, is also described. These provide a pH‐dependent two‐station [2]rotaxane molecular machine and a palindromic [3]rotaxane molecular machine, respectively. Molecular machinery on both interlocked compounds through variation of pH was studied and characterized by means of NMR spectroscopy.     

Clipping and stoppering anion templated synthesis of a [2]rotaxane host system

A new [2]rotaxane host system containing nitro-isophthalamide macrocycle and polyether functionalised pyridinium axle components is prepared via clipping and stoppering synthetic methodologies using chloride anion templation. After removing the chloride anion template, (1)H NMR titration experiments reveal the unique interlocked host cavity to be highly selective for binding chloride and bromide in preference to basic oxoanions in competitive aqueous solvent mixtures. The rotaxane host system proved to be a superior anion complexant in comparison to the individual macrocycle and axle components. The anion binding affinity of the novel rotaxane is also investigated via molecular dynamics simulations and in general the structural data obtained corroborates the experimental solution anion recognition behaviour.     

Rotaxanes Capped with Host Molecules: Supramolecular Behavior of Adamantylated Bisimidazolium Salts Containing a Biphenyl Centerpiece

Bisimidazolium salts with one central biphenyl binding site and two terminal adamantyl binding sites form water‐soluble binary or ternary aggregates with cucurbit[7]uril (CB7) and β‐cyclodextrin (β‐CD) with rotaxane and pseudorotaxane architectures. The observed arrangements result from cooperation of the supramolecular stopper binding strength and steric barriers against free slippage of the CB7 and β‐CD host molecules over the bisimidazolium guest axle.     

Interconversion between [5]pseudorotaxane and [3]pseudorotaxane by pasting/detaching two axle molecules

An acceptor-donor-acceptor-type linear molecule 1(2+) containing one electron-rich naphthoxy (NP) unit and two monocharged viologen (MCV) units was synthesized. Through the noncovalent interaction of cucurbit[8]uril (CB[8]) with one NP and one MCV in 1(2+), we first obtained a [2]pseudorotaxane ([1(2+)]?CB[8]), and the excess CB[8] included simultaneously the two bare MCV units of two [2]pseudorotaxanes to form a [5]pseudorotaxane ([1(2+)](2)?[CB[8]](3)). Its transformation to [3]pseudorotaxane was achieved through detaching the two axle molecules in the presence of acid, and then the addition of base may result in a reversible switch between two different pseudorotaxanes. This novel methodology elongating reversibly linear molecules by noncovalent interactions will benefit the development of stimuli-responsive functional molecular devices.     

Wire-type ruthenium(II) complexes with terpyridine-containing [2]rotaxanes as ligands: Synthesis, characterization, and photophysical properties

[2]Rotaxanes based on the 1,2-bis(pyridinium)ethane subset[24]crown-8 ether motif were prepared that contain a terminal terpyridine group for coordination to a transition-metal ion. These rotaxane ligands were utilized in the preparation of a series of heteroleptic [Ru(terpy)(terpy-rotaxane)]2+ complexes. The compounds were characterized by 1D and 2D 1H NMR spectroscopy, X-ray crystallography, and high-resolution electrospray ionization mass spectrometry. The effect of using a rotaxane as a ligand was probed by UV/Vis/NIR absorption and emission spectroscopy of the Ru(II) complexes. In contrast with the parent [Ru(terpy)(2)]2+ complex, at room temperature the examined complexes exhibit a luminescence band in the near infrared region and a relatively long lived triplet metal-to-ligand charge-transfer (3MLCT) excited state, owing to the presence of strong-electron-acceptor pyridinium substituents on one of the two terpy ligands. Visible-light excitation of the Ru-based chromophore in acetonitrile at room temperature causes an electron transfer to the covalently linked 4,4'-bipyridinium unit and the quenching of the MLCT luminescence. The 3MLCT excited state, however, is not quenched at all in rigid matrix at 77 K. The rotaxane structure was found to affect the absorption and luminescence properties of the complexes. In particular, when a crown ether surrounds the cationic axle, the photoinduced electron-transfer process is slowed down by a factor from 2 to 3. Such features, together with the synthetic and structural advantages offered by [Ru(terpy)2]2+-type complexes compared to, for example, [Ru(bpy)3]2+-type compounds, render these rotaxane-metal complexes promising candidates for the construction of photochemical molecular devices with a wire-type structure.     

Organometallic Rotaxanes with a Triazole Group in the Axle Component and Their Behavior as Ligands of PtII Complexes

Two ferrocenylmethyl ammonium salts were used as axle components of pseudorotaxanes with dibenzo[24]crown‐8. The pseudorotaxane with an alkyne terminal group in the axle component underwent a Cu‐catalyzed Huisgen coupling reaction (click reaction) with an alkyl azide to afford cationic [2]rotaxanes with a triazole group in the axle molecule. The rotaxane reacted with Ac₂O to produce neutral rotaxanes with an amide group in the axle component. Both cationic and neutral rotaxanes were treated with K[PtCl₃(CH₂?CH₂)] to form the Pt^II‐containing rotaxanes.     

Templated conversion of a crown ether-containing macrobicycle into [2]rotaxanes

A crown ether-containing macrobicycle was used as the wheel component in a templated synthesis of a [2]rotaxane with an acetal-containing axle. The molecular structures of the macrobicycle and the [2]rotaxane were characterized by NMR spectroscopy and X-ray crystallography. The chloride-binding ability of the macrobicycle, either free in solution or when it is part of a [2]rotaxane, is quite weak as determined by NMR titration experiments. A second analogous [2]rotaxane, with a longer axle, was synthesized, and its solvent-dependent co-conformation was characterized by 2D NMR spectroscopy. The position of the wheel along the axle can be controlled by the solvent polarity, however, attempts to use metal cations such as Na(+), K(+), Ba(2+), and Ag(+) to switch the wheel position in polar solvents were unsuccessful.